Cp4.1LG03g15670 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g15670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Homeobox-leucine zipper family protein
Location	Cp4.1LG03 : 13608181 .. 13610416 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACTCTGCTGCAAATCACCAGCAAAAGCTATGACATCTCCCTGCTGCACCGTCTCCCCATTTTTCCCACCATTTTCTTTCCTCTCTGCTTTCCCGGAATCCAAACACTAATTAATTACTTGCACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATTTCGTTCTGTTTGTGTAGTCTTCGGTTCTTGGAGGAACAAAGAATGGGCGGGAGAGATGACGAGTTGCGGCTGACTTTGAGTTTAGGGTTGGGAGTTACGACTCGGCCTTCTTTTCAGCCGACTCACATTCACAGGCCATCGAACTCCATGCATAATCACATCCGCAATGGTTCTTGGAAAGAGCTCTTTCAATTTTCTGGTAGTTTATTGATTTCCTGTCTTCTTATCTTTTCATTTGCATTTTATCTATTGCTCTACTGTGTTTCTTCGGAGTTTTTTGTGTTGGATCCGTTACGATTTGAAGGATTGTATCTCATCCGAAGATTCTGCTCCGATTTCGCCATTTTCGTCGTCGTTTCTTAGAGAACTGATGATTTTGATAATTTATGAGTATTCGTTCGATTGAGTTTCTGAACCGTCGGTTCTGTATTTTTGGCTTATTTTTTCCGGTTAGATCGAAATGCCGATTCTAGGTCGTTTCTTAGGGGAATCGACGTGAATCGGCTGCCGACTGTCGTGGACGGCGAGGAAGAGTACGGCGTTTCATCTCCGAACAGTACCGTTTCTAGCATCAGTGGAAAGAGGAGCGAGAGAGAAGCCGAGGCGGAGGCGGAGGCTGAGGCTGAGGCCTCGAGAGCCTCGTGCTCGCAAGGGAGCGACAATGAAGACGGCGGAGGCGGCGACGCCTCGAGAAAGAAGCTGAGGCTATCAAAGGAACAGTCGATGGTTCTTGAGGAGACCTTCAAAGAGCACAATACTCTCAATCCAGTAAGTGGTAATTTGGTCATTTCGTACGATTCCTCTCTCTACTTCCATGTAAATGAGTTGTGGCAATATGGGTAACTATTGAGTTTCACGAGGGTGTTTTAGTCAATATCCGGTTGAGTTGTAAGAAAAGATGTAATTGCACTTTATTGACATTACGGGTTTATCTAGAATCTCGGTTACATTTACGTTACCTTTAAATTGATTGGTTCCTTTATTATTTTATTTTTGTAAATGTCAGAAGCAAAAGCTGGCACTTGCAAAGCAGCTGAATCTGAGACCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGGGCAAGGTAAGTAAATGTCACTACGAACTCGGGGTAGTATGGACATTTTAGTCTGCTGGGTTTCAGAACTTAGAAGTCAATTCATTCAGTATCCAGGGCTCTGCTAGAACCGCCTCCTCGTTAAAAGGCGGAGGAGTCGTTGCTTTCGTAATTAATAGGTGCTCTGCCTCTGTTTTTTAGTAGGAAGGTCAAAATTGTGAAGAGAAGGTTTTGTTTTGATTTAAGAGCCTTGAATTAATAGGTGCTCTGCCTCTGTTTTTTAGTATGGACATTTTAGTCTGCTGGGTTTCAGAACTTAGTTTAGTGTGGGATTAATTGGTGTGGAAATTGGGTGGGCAGGACGAAACTGAAGCAGACAGAAGTGGATTGCGAGTACTTGAAGAGGTGCTGCGAGAATCTAACAGGGGAGAACAGAAGGCTGCAGAAGGAGGTGCAGGAGTTGAGAGCGCTCAAGCTTTCTCCACAGCTCTATATGCACATGAATCCTCCTACCACCCTCACCATGTGTCCTCAGTGTGAGCGTGTGGCAGTTTCCTCATCTTCTTCCACCACCTGCCATCCAGCAGCGGCTGCTGGTGTACAGCGTCCCTCCATGCCCATCAACCCATGGGCGGCGGTGTTGCCGATTGAACGTTGATCCCATATTGTGTTTTGTTGTGTGTATGGATGGGAAATTTTGTTTTGGAGATGCTGGTGAGTTCATAGCTTGGTTAGGTCTGCCTAATCCTCTCCCTAAGATGAATGGAGGGGAGTGAGATAGGAATGGACAATCAGAATGGAGAACCTTTTCTTTGCCACAAATGAAAAGGGTTTTATTTGGATGGGACATAAGTTATTGATTTGAATATATTAACATAACATAAGATGGGTTTGAGTAAGATGGTTCGGATGAACAAATCAACGAATTCATATATATATATATATACACGGGATAGGCCACGCAACAGATAGATAGATAGATATATTATGGGGGCTTCCATGCGCTTGGGAAACT

mRNA sequence

TACTCTGCTGCAAATCACCAGCAAAAGCTATGACATCTCCCTGCTGCACCGTCTCCCCATTTTTCCCACCATTTTCTTTCCTCTCTGCTTTCCCGGAATCCAAACACTAATTAATTACTTGCACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATTTCGTTCTGTTTGTGTAGTCTTCGGTTCTTGGAGGAACAAAGAATGGGCGGGAGAGATGACGAGTTGCGGCTGACTTTGAGTTTAGGGTTGGGAGTTACGACTCGGCCTTCTTTTCAGCCGACTCACATTCACAGGCCATCGAACTCCATGCATAATCACATCCGCAATGGTTCTTGGAAAGAGCTCTTTCAATTTTCTGATCGAAATGCCGATTCTAGGTCGTTTCTTAGGGGAATCGACGTGAATCGGCTGCCGACTGTCGTGGACGGCGAGGAAGAGTACGGCGTTTCATCTCCGAACAGTACCGTTTCTAGCATCAGTGGAAAGAGGAGCGAGAGAGAAGCCGAGGCGGAGGCGGAGGCTGAGGCTGAGGCCTCGAGAGCCTCGTGCTCGCAAGGGAGCGACAATGAAGACGGCGGAGGCGGCGACGCCTCGAGAAAGAAGCTGAGGCTATCAAAGGAACAGTCGATGGTTCTTGAGGAGACCTTCAAAGAGCACAATACTCTCAATCCAAAGCAAAAGCTGGCACTTGCAAAGCAGCTGAATCTGAGACCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGGGCAAGGACGAAACTGAAGCAGACAGAAGTGGATTGCGAGTACTTGAAGAGGTGCTGCGAGAATCTAACAGGGGAGAACAGAAGGCTGCAGAAGGAGGTGCAGGAGTTGAGAGCGCTCAAGCTTTCTCCACAGCTCTATATGCACATGAATCCTCCTACCACCCTCACCATGTGTCCTCAGTGTGAGCGTGTGGCAGTTTCCTCATCTTCTTCCACCACCTGCCATCCAGCAGCGGCTGCTGGTGTACAGCGTCCCTCCATGCCCATCAACCCATGGGCGGCGGTGTTGCCGATTGAACGTTGATCCCATATTGTGTTTTGTTGTGTGTATGGATGGGAAATTTTGTTTTGGAGATGCTGGTGAGTTCATAGCTTGGTTAGGTCTGCCTAATCCTCTCCCTAAGATGAATGGAGGGGAGTGAGATAGGAATGGACAATCAGAATGGAGAACCTTTTCTTTGCCACAAATGAAAAGGGTTTTATTTGGATGGGACATAAGTTATTGATTTGAATATATTAACATAACATAAGATGGGTTTGAGTAAGATGGTTCGGATGAACAAATCAACGAATTCATATATATATATATATACACGGGATAGGCCACGCAACAGATAGATAGATAGATATATTATGGGGGCTTCCATGCGCTTGGGAAACT

Coding sequence (CDS)

ATGGGCGGGAGAGATGACGAGTTGCGGCTGACTTTGAGTTTAGGGTTGGGAGTTACGACTCGGCCTTCTTTTCAGCCGACTCACATTCACAGGCCATCGAACTCCATGCATAATCACATCCGCAATGGTTCTTGGAAAGAGCTCTTTCAATTTTCTGATCGAAATGCCGATTCTAGGTCGTTTCTTAGGGGAATCGACGTGAATCGGCTGCCGACTGTCGTGGACGGCGAGGAAGAGTACGGCGTTTCATCTCCGAACAGTACCGTTTCTAGCATCAGTGGAAAGAGGAGCGAGAGAGAAGCCGAGGCGGAGGCGGAGGCTGAGGCTGAGGCCTCGAGAGCCTCGTGCTCGCAAGGGAGCGACAATGAAGACGGCGGAGGCGGCGACGCCTCGAGAAAGAAGCTGAGGCTATCAAAGGAACAGTCGATGGTTCTTGAGGAGACCTTCAAAGAGCACAATACTCTCAATCCAAAGCAAAAGCTGGCACTTGCAAAGCAGCTGAATCTGAGACCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGGGCAAGGACGAAACTGAAGCAGACAGAAGTGGATTGCGAGTACTTGAAGAGGTGCTGCGAGAATCTAACAGGGGAGAACAGAAGGCTGCAGAAGGAGGTGCAGGAGTTGAGAGCGCTCAAGCTTTCTCCACAGCTCTATATGCACATGAATCCTCCTACCACCCTCACCATGTGTCCTCAGTGTGAGCGTGTGGCAGTTTCCTCATCTTCTTCCACCACCTGCCATCCAGCAGCGGCTGCTGGTGTACAGCGTCCCTCCATGCCCATCAACCCATGGGCGGCGGTGTTGCCGATTGAACGTTGA

Protein sequence

MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADSRSFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCSQGSDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPINPWAAVLPIER

Homology

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BLAST of Cp4.1LG03g15670 vs. Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 6.0e-85
Identity = 195/306 (63.73%), Postives = 223/306 (72.88%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTR-PSFQ-----------PTHIHRPSNSMHNHIRN--GSWK 60
           M  RDD L L+LSL LG   + PS +            +H+     S +NH +    +W 
Sbjct: 1   MSERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWI 60

Query: 61  ELFQFSDRNADSRSFLRGIDVNRLPT--VVDGEEE-YGVSSPNSTVSSI-SGKRSEREAE 120
            +FQ S+RN+D RSFLRGIDVNR P+  VVD E+E  GVSSPNSTVSS+ SGK+SERE  
Sbjct: 61  NMFQSSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELM 120

Query: 121 AEAEA-------EAEASRASCSQG--SDNEDGGGG--DASRKKLRLSKEQSMVLEETFKE 180
           A A A       + E  RASCS G  SD+EDG G   D+SRKKLRLSKEQ++VLEETFKE
Sbjct: 121 AAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKE 180

Query: 181 HNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRL 240
           H+TLNPKQK+ALAKQLNLR RQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT ENRRL
Sbjct: 181 HSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRL 240

Query: 241 QKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPI 278
           QKEV ELRALKLSP LYMHM PPTTLTMCP CERVAV+SSSS+   P   +    P  P+
Sbjct: 241 QKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNS--SSPMGPM 300

[Close]

BLAST of Cp4.1LG03g15670 vs. Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.6e-80
Identity = 188/312 (60.26%), Postives = 215/312 (68.91%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPT--------------HIHRPSNSMH-NHIRNGSW 60
           MG RDD L L+LSLG      PS +                H+H  +N+ H   I N SW
Sbjct: 1   MGERDDGLGLSLSLGNSQQKEPSLRLNLMPLTTSSSSSSFQHMHNQNNNSHPQKIHNISW 60

Query: 61  KELFQFS-------DRNADSRSFLRGIDVNRLPT---VVDGEEEYGV-SSPNSTVSSISG 120
             LFQ S       +RN+D+ SFLRG +VNR  +   VVD EEE  V SSPNS VSS+SG
Sbjct: 61  THLFQSSGIKRTTAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSG 120

Query: 121 KRSEREAEAEAEAEAEASRASCSQG-----SDNEDGGGGDASRKKLRLSKEQSMVLEETF 180
            + +  A A    E EA RASCS+G     SD+EDGG GD SRKKLRLSK+Q++VLEETF
Sbjct: 121 NKRDL-AVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETF 180

Query: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENR 240
           KEH+TLNPKQKLALAKQLNLR RQVEVWFQNRRARTKLKQTEVDCEYLKRCC+NLT ENR
Sbjct: 181 KEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENR 240

Query: 241 RLQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSSSSTTCHPAAAAG---VQR 278
           RLQKEV ELRALKLSP LYMHM PPTTLTMCP CERV+ SS+++ T  P+       V R
Sbjct: 241 RLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVS-SSAATVTAAPSTTTTPTVVGR 300

[Close]

BLAST of Cp4.1LG03g15670 vs. Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-73
Identity = 167/282 (59.22%), Postives = 196/282 (69.50%), Query Frame = 1


Query: 6   DELRLTLSLG-----LGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADS-- 65
           D+L L+L L      + + + PS   T    PS+S     R  SW E F  S  N+DS  
Sbjct: 6   DDLGLSLGLNFPKKQINLKSNPSVSVT----PSSSSFGLFRRSSWNESFTSSVPNSDSSQ 65

Query: 66  ---RSFLRGIDVNRLPTVVD-GEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRA 125
              R+F+RGIDVNR P+  + G+E+ GVSSPNSTVSS +GKRSERE + + +        
Sbjct: 66  KETRTFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSEREEDTDPQG------- 125

Query: 126 SCSQG-SDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQ 185
             S+G SD+EDG   D SRKKLRLSK+QS +LEETFK+H+TLNPKQK ALAKQL LR RQ
Sbjct: 126 --SRGISDDEDG---DNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQ 185

Query: 186 VEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNP 245
           VEVWFQNRRARTKLKQTEVDCE+L+RCCENLT ENRRLQKEV ELRALKLSPQ YMHM+P
Sbjct: 186 VEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSP 245

Query: 246 PTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPINPWA 276
           PTTLTMCP CE V+V         P AA      S+P+N WA
Sbjct: 246 PTTLTMCPSCEHVSVPPP-----QPQAATSAHHRSLPVNAWA 266

[Close]

BLAST of Cp4.1LG03g15670 vs. Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=1 SV=2)

HSP 1 Score: 249.6 bits (636), Expect = 4.1e-65
Identity = 161/284 (56.69%), Postives = 187/284 (65.85%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADSRS 60
           M G++D L L+LSLG      P     +   P++S+ N+++   W + F       D  S
Sbjct: 2   MMGKED-LGLSLSLGFSQNHNPLQMNLN---PNSSLSNNLQRLPWNQTF-------DPTS 61

Query: 61  FLRGIDVNRLPTVVDGEEEYGVSSPNSTVSS-ISGKRSERE-------AEAEAEAEAEAS 120
            LR IDVN  P+ V+ EE+ GVSSPNST+SS ISGKRSERE          +   E    
Sbjct: 62  DLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPD 121

Query: 121 RASCSQGSDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPR 180
           R   S+G+ +E+  GG+ SRKKLRLSK+QS  LEETFKEHNTLNPKQKLALAK+LNL  R
Sbjct: 122 R-GYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTAR 181

Query: 181 QVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMN 240
           QVEVWFQNRRARTKLKQTEVDCEYLKRC E LT ENRRLQKE  ELR LKLSPQ Y  M 
Sbjct: 182 QVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMT 241

Query: 241 PPTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPINPWAA 277
           PPTTL MCP CERV   SSS+   +        RP + INPW A
Sbjct: 242 PPTTLIMCPSCERVGGPSSSNHHHN-------HRP-VSINPWVA 265

[Close]

BLAST of Cp4.1LG03g15670 vs. Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-64
Identity = 155/282 (54.96%), Postives = 189/282 (67.02%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIH-RPSNSMHNHIRNGSWKELFQFSDRNADSR 60
           M G++D L L+LSLG          P  ++ +P++S  ++++   W +    S  +   +
Sbjct: 2   MMGKED-LGLSLSLGFAQN-----HPLQLNLKPTSSPMSNLQMFPWNQTL-VSSSDQQKQ 61

Query: 61  SFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSS-ISGKRSEREAEAEA------EAEAEAS 120
            FLR IDVN LPT VD EEE GVSSPNST+SS +SGKR   E E  +      + +    
Sbjct: 62  QFLRKIDVNSLPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLD 121

Query: 121 RASCSQGSDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPR 180
           R+S    SD E+  GG+  RKKLRLSK+QS VLE+TFKEHNTLNPKQKLALAK+L L  R
Sbjct: 122 RSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTAR 181

Query: 181 QVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMN 240
           QVEVWFQNRRARTKLKQTEVDCEYLKRC E LT ENRRL+KE  ELRALKLSP+LY  M+
Sbjct: 182 QVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMS 241

Query: 241 PPTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPINPW 275
           PPTTL MCP CERVA  SSS+            + S+ ++PW
Sbjct: 242 PPTTLLMCPSCERVAGPSSSNH----------NQRSVSLSPW 266

[Close]

BLAST of Cp4.1LG03g15670 vs. TrEMBL
Match: A0A0A0L3P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118080 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.4e-120
Identity = 246/299 (82.27%), Postives = 257/299 (85.95%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADSRS 60
           MGGRDD++ LTLSLG GVTT    Q TH+ RPS+  ++H+R   W ELFQFSDRNADSRS
Sbjct: 1   MGGRDDDVGLTLSLGFGVTT----QSTHMQRPSSMHNHHLRKTHWNELFQFSDRNADSRS 60

Query: 61  FLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREA-----------EAEAEAEA 120
           FLRGIDVNRLPT VDGEEE GVSSPNST+SSISGKRSEREA           EAEAEAEA
Sbjct: 61  FLRGIDVNRLPTGVDGEEENGVSSPNSTISSISGKRSEREAAGDEAEAEAEAEAEAEAEA 120

Query: 121 EASRASCSQGSDNEDGGGGD--ASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL 180
           EA RASCS+GSD+EDGGGGD  ASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL
Sbjct: 121 EAERASCSRGSDDEDGGGGDGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL 180

Query: 181 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQL 240
           NL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELRALKLSPQL
Sbjct: 181 NLTPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQL 240

Query: 241 YMHMNPPTTLTMCPQCERVAVSSSSS----TTCHPAAAAGVQRPSMPINPWAAVLPIER 283
           YMHMNPPTTLTMCPQCERVAVSSSSS    TT    AAAGVQRPSM INPW AVLPI+R
Sbjct: 241 YMHMNPPTTLTMCPQCERVAVSSSSSTSAATTTRHQAAAGVQRPSMAINPW-AVLPIQR 294

[Close]

BLAST of Cp4.1LG03g15670 vs. TrEMBL
Match: A0A067HCG8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023113mg PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 4.6e-100
Identity = 211/289 (73.01%), Postives = 233/289 (80.62%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSN-SMHNHIRNGSWKELFQFSDRNADSR 60
           MG +DD L L+LSLG      PS +  H+   S+ SM NH +   W ELF  SDRN+D+R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTR 60

Query: 61  SFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCSQG 120
           SFLRGIDVN+ PTV D EEE GVSSPNSTVSSISGKRSERE   +   E EA RASCS+G
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGD---ETEAERASCSRG 120

Query: 121 SDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 180
           SD+EDGG GDASRKKLRLSKEQS++LEETFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 121 SDDEDGGAGDASRKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSSSSTTCHPAAAAGVQRPSM--------PINPWAAVLPI 281
           CP CERVAVSSSSS++   AAA G  R  +        P++PWAA LPI
Sbjct: 241 CPSCERVAVSSSSSSS--SAAANGTTRLPIGPNHQRLTPVSPWAA-LPI 283

[Close]

BLAST of Cp4.1LG03g15670 vs. TrEMBL
Match: V4U8Y0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 4.6e-100
Identity = 211/289 (73.01%), Postives = 233/289 (80.62%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSN-SMHNHIRNGSWKELFQFSDRNADSR 60
           MG +DD L L+LSLG      PS +  H+   S+ SM NH +   W ELF  SDRN+D+R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTR 60

Query: 61  SFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCSQG 120
           SFLRGIDVN+ PTV D EEE GVSSPNSTVSSISGKRSERE   +   E EA RASCS+G
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGD---ETEAERASCSRG 120

Query: 121 SDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 180
           SD+EDGG GDASRKKLRLSKEQS++LEETFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 121 SDDEDGGAGDASRKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSSSSTTCHPAAAAGVQRPSM--------PINPWAAVLPI 281
           CP CERVAVSSSSS++   AAA G  R  +        P++PWAA LPI
Sbjct: 241 CPSCERVAVSSSSSSS--SAAANGTTRLPIGPNHQRLTPVSPWAA-LPI 283

[Close]

BLAST of Cp4.1LG03g15670 vs. TrEMBL
Match: A0A067JXY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14602 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.8e-96
Identity = 211/290 (72.76%), Postives = 232/290 (80.00%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHR---PSNSMHNHIRNGSWKELFQFSDRNAD 60
           MG +DD L L LSLG G TT+ +     ++    PS  M N+    S  +LFQ SD+N+D
Sbjct: 1   MGEKDDGLGLGLSLGFGGTTQQNQSSLKLNLMPFPSQFMQNNHLRTSLNDLFQSSDKNSD 60

Query: 61  SRSFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCS 120
           +RSF RGID+NR+PTVVD ++E GVSSPNST+SSISGKRSERE   E   EAEA R SCS
Sbjct: 61  ARSFQRGIDMNRIPTVVDCDDETGVSSPNSTISSISGKRSEREHIGE---EAEAERTSCS 120

Query: 121 QG-SDNEDGG-GGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVE 180
            G SD+EDGG GGDASRKKLRLSKEQS+VLEETFKEHNTLNPKQKLALAKQLNLRPRQVE
Sbjct: 121 HGGSDDEDGGAGGDASRKKLRLSKEQSLVLEETFKEHNTLNPKQKLALAKQLNLRPRQVE 180

Query: 181 VWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPT 240
           VWFQNRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELRALKLSPQLYMHMNPPT
Sbjct: 181 VWFQNRRARTKLKQTEVDCEYLKRCCENLTQENRRLQKEVQELRALKLSPQLYMHMNPPT 240

Query: 241 TLTMCPQCERVAVSSSSST--------TCHPAAAAGVQRPSMPINPWAAV 278
           TLTMCP CERVAVSSSSS+        T HP   +  QRP +PI PWAA+
Sbjct: 241 TLTMCPSCERVAVSSSSSSAAASSTALTRHP-VNSHPQRP-VPIKPWAAL 285

[Close]

BLAST of Cp4.1LG03g15670 vs. TrEMBL
Match: V4U3L9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.4e-96
Identity = 208/289 (71.97%), Postives = 229/289 (79.24%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSN-SMHNHIRNGSWKELFQFSDRNADSR 60
           MG +DD L L+LSLG      PS +  H+   S+ SM NH +   W ELF  SD    +R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSD----TR 60

Query: 61  SFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCSQG 120
           SFLRGIDVN+ PTV D EEE GVSSPNSTVSSISGKRSERE   +   E EA RASCS+G
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGD---ETEAERASCSRG 120

Query: 121 SDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 180
           SD+EDGG GDASRKKLRLSKEQS++LEETFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 121 SDDEDGGAGDASRKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSSSSTTCHPAAAAGVQRPSM--------PINPWAAVLPI 281
           CP CERVAVSSSSS++   AAA G  R  +        P++PWAA LPI
Sbjct: 241 CPSCERVAVSSSSSSS--SAAANGTTRLPIGPNHQRLTPVSPWAA-LPI 279

[Close]

BLAST of Cp4.1LG03g15670 vs. TAIR10
Match: AT3G60390.1 (AT3G60390.1 homeobox-leucine zipper protein 3)

HSP 1 Score: 315.5 bits (807), Expect = 3.4e-86
Identity = 195/306 (63.73%), Postives = 223/306 (72.88%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTR-PSFQ-----------PTHIHRPSNSMHNHIRN--GSWK 60
           M  RDD L L+LSL LG   + PS +            +H+     S +NH +    +W 
Sbjct: 1   MSERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWI 60

Query: 61  ELFQFSDRNADSRSFLRGIDVNRLPT--VVDGEEE-YGVSSPNSTVSSI-SGKRSEREAE 120
            +FQ S+RN+D RSFLRGIDVNR P+  VVD E+E  GVSSPNSTVSS+ SGK+SERE  
Sbjct: 61  NMFQSSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELM 120

Query: 121 AEAEA-------EAEASRASCSQG--SDNEDGGGG--DASRKKLRLSKEQSMVLEETFKE 180
           A A A       + E  RASCS G  SD+EDG G   D+SRKKLRLSKEQ++VLEETFKE
Sbjct: 121 AAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKE 180

Query: 181 HNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRL 240
           H+TLNPKQK+ALAKQLNLR RQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT ENRRL
Sbjct: 181 HSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRL 240

Query: 241 QKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPI 278
           QKEV ELRALKLSP LYMHM PPTTLTMCP CERVAV+SSSS+   P   +    P  P+
Sbjct: 241 QKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNS--SSPMGPM 300

[Close]

BLAST of Cp4.1LG03g15670 vs. TAIR10
Match: AT2G44910.1 (AT2G44910.1 homeobox-leucine zipper protein 4)

HSP 1 Score: 298.5 bits (763), Expect = 4.3e-81
Identity = 188/312 (60.26%), Postives = 215/312 (68.91%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPT--------------HIHRPSNSMH-NHIRNGSW 60
           MG RDD L L+LSLG      PS +                H+H  +N+ H   I N SW
Sbjct: 1   MGERDDGLGLSLSLGNSQQKEPSLRLNLMPLTTSSSSSSFQHMHNQNNNSHPQKIHNISW 60

Query: 61  KELFQFS-------DRNADSRSFLRGIDVNRLPT---VVDGEEEYGV-SSPNSTVSSISG 120
             LFQ S       +RN+D+ SFLRG +VNR  +   VVD EEE  V SSPNS VSS+SG
Sbjct: 61  THLFQSSGIKRTTAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSG 120

Query: 121 KRSEREAEAEAEAEAEASRASCSQG-----SDNEDGGGGDASRKKLRLSKEQSMVLEETF 180
            + +  A A    E EA RASCS+G     SD+EDGG GD SRKKLRLSK+Q++VLEETF
Sbjct: 121 NKRDL-AVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETF 180

Query: 181 KEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENR 240
           KEH+TLNPKQKLALAKQLNLR RQVEVWFQNRRARTKLKQTEVDCEYLKRCC+NLT ENR
Sbjct: 181 KEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENR 240

Query: 241 RLQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSSSSTTCHPAAAAG---VQR 278
           RLQKEV ELRALKLSP LYMHM PPTTLTMCP CERV+ SS+++ T  P+       V R
Sbjct: 241 RLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVS-SSAATVTAAPSTTTTPTVVGR 300

[Close]

BLAST of Cp4.1LG03g15670 vs. TAIR10
Match: AT4G16780.1 (AT4G16780.1 homeobox protein 2)

HSP 1 Score: 278.1 bits (710), Expect = 6.0e-75
Identity = 167/282 (59.22%), Postives = 196/282 (69.50%), Query Frame = 1


Query: 6   DELRLTLSLG-----LGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADS-- 65
           D+L L+L L      + + + PS   T    PS+S     R  SW E F  S  N+DS  
Sbjct: 6   DDLGLSLGLNFPKKQINLKSNPSVSVT----PSSSSFGLFRRSSWNESFTSSVPNSDSSQ 65

Query: 66  ---RSFLRGIDVNRLPTVVD-GEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRA 125
              R+F+RGIDVNR P+  + G+E+ GVSSPNSTVSS +GKRSERE + + +        
Sbjct: 66  KETRTFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSEREEDTDPQG------- 125

Query: 126 SCSQG-SDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQ 185
             S+G SD+EDG   D SRKKLRLSK+QS +LEETFK+H+TLNPKQK ALAKQL LR RQ
Sbjct: 126 --SRGISDDEDG---DNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQ 185

Query: 186 VEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNP 245
           VEVWFQNRRARTKLKQTEVDCE+L+RCCENLT ENRRLQKEV ELRALKLSPQ YMHM+P
Sbjct: 186 VEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSP 245

Query: 246 PTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPINPWA 276
           PTTLTMCP CE V+V         P AA      S+P+N WA
Sbjct: 246 PTTLTMCPSCEHVSVPPP-----QPQAATSAHHRSLPVNAWA 266

[Close]

BLAST of Cp4.1LG03g15670 vs. TAIR10
Match: AT5G47370.1 (AT5G47370.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein)

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-66
Identity = 161/284 (56.69%), Postives = 187/284 (65.85%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADSRS 60
           M G++D L L+LSLG      P     +   P++S+ N+++   W + F       D  S
Sbjct: 2   MMGKED-LGLSLSLGFSQNHNPLQMNLN---PNSSLSNNLQRLPWNQTF-------DPTS 61

Query: 61  FLRGIDVNRLPTVVDGEEEYGVSSPNSTVSS-ISGKRSERE-------AEAEAEAEAEAS 120
            LR IDVN  P+ V+ EE+ GVSSPNST+SS ISGKRSERE          +   E    
Sbjct: 62  DLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPD 121

Query: 121 RASCSQGSDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPR 180
           R   S+G+ +E+  GG+ SRKKLRLSK+QS  LEETFKEHNTLNPKQKLALAK+LNL  R
Sbjct: 122 R-GYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTAR 181

Query: 181 QVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMN 240
           QVEVWFQNRRARTKLKQTEVDCEYLKRC E LT ENRRLQKE  ELR LKLSPQ Y  M 
Sbjct: 182 QVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMT 241

Query: 241 PPTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPINPWAA 277
           PPTTL MCP CERV   SSS+   +        RP + INPW A
Sbjct: 242 PPTTLIMCPSCERVGGPSSSNHHHN-------HRP-VSINPWVA 265

[Close]

BLAST of Cp4.1LG03g15670 vs. TAIR10
Match: AT4G17460.1 (AT4G17460.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein)

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-65
Identity = 155/282 (54.96%), Postives = 189/282 (67.02%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIH-RPSNSMHNHIRNGSWKELFQFSDRNADSR 60
           M G++D L L+LSLG          P  ++ +P++S  ++++   W +    S  +   +
Sbjct: 2   MMGKED-LGLSLSLGFAQN-----HPLQLNLKPTSSPMSNLQMFPWNQTL-VSSSDQQKQ 61

Query: 61  SFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSS-ISGKRSEREAEAEA------EAEAEAS 120
            FLR IDVN LPT VD EEE GVSSPNST+SS +SGKR   E E  +      + +    
Sbjct: 62  QFLRKIDVNSLPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLD 121

Query: 121 RASCSQGSDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPR 180
           R+S    SD E+  GG+  RKKLRLSK+QS VLE+TFKEHNTLNPKQKLALAK+L L  R
Sbjct: 122 RSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTAR 181

Query: 181 QVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMN 240
           QVEVWFQNRRARTKLKQTEVDCEYLKRC E LT ENRRL+KE  ELRALKLSP+LY  M+
Sbjct: 182 QVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMS 241

Query: 241 PPTTLTMCPQCERVAVSSSSSTTCHPAAAAGVQRPSMPINPW 275
           PPTTL MCP CERVA  SSS+            + S+ ++PW
Sbjct: 242 PPTTLLMCPSCERVAGPSSSNH----------NQRSVSLSPW 266

[Close]

BLAST of Cp4.1LG03g15670 vs. NCBI nr
Match: gi|659074831|ref|XP_008437820.1| (PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 2.8e-122
Identity = 253/300 (84.33%), Postives = 260/300 (86.67%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADSRS 60
           MGGRDD+L LTLSLG GVTT    QPTH+ RPS  MHNH+R  SW ELFQFSDRNADSRS
Sbjct: 1   MGGRDDDLGLTLSLGFGVTT----QPTHMQRPS--MHNHLRKTSWNELFQFSDRNADSRS 60

Query: 61  FLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREA-----------EAEAEAEA 120
           FLRGIDVNRLPT VDGEEE GVSSPNST+SSISGKRSEREA           EAEAEAEA
Sbjct: 61  FLRGIDVNRLPTGVDGEEENGVSSPNSTISSISGKRSEREAAGDEAEAEAEAEAEAEAEA 120

Query: 121 EASRASCSQGSDNEDGGGGD--ASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL 180
           EA RASCS+GSD+EDGGGGD  ASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL
Sbjct: 121 EAERASCSRGSDDEDGGGGDGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL 180

Query: 181 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQL 240
           NL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELRALKLSPQL
Sbjct: 181 NLTPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQL 240

Query: 241 YMHMNPPTTLTMCPQCERVAVSSSSS-----TTCHPAAAAGVQRPSMPINPWAAVLPIER 283
           YMHMNPPTTLTMCPQCERVAVSSSSS     TT HP AAAGVQR SM INPW AVLPI+R
Sbjct: 241 YMHMNPPTTLTMCPQCERVAVSSSSSTSAATTTRHP-AAAGVQRTSMAINPW-AVLPIQR 292

[Close]

BLAST of Cp4.1LG03g15670 vs. NCBI nr
Match: gi|778676724|ref|XP_004133780.2| (PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 3.4e-120
Identity = 246/299 (82.27%), Postives = 257/299 (85.95%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADSRS 60
           MGGRDD++ LTLSLG GVTT    Q TH+ RPS+  ++H+R   W ELFQFSDRNADSRS
Sbjct: 1   MGGRDDDVGLTLSLGFGVTT----QSTHMQRPSSMHNHHLRKTHWNELFQFSDRNADSRS 60

Query: 61  FLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREA-----------EAEAEAEA 120
           FLRGIDVNRLPT VDGEEE GVSSPNST+SSISGKRSEREA           EAEAEAEA
Sbjct: 61  FLRGIDVNRLPTGVDGEEENGVSSPNSTISSISGKRSEREAAGDEAEAEAEAEAEAEAEA 120

Query: 121 EASRASCSQGSDNEDGGGGD--ASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL 180
           EA RASCS+GSD+EDGGGGD  ASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL
Sbjct: 121 EAERASCSRGSDDEDGGGGDGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQL 180

Query: 181 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQL 240
           NL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELRALKLSPQL
Sbjct: 181 NLTPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQL 240

Query: 241 YMHMNPPTTLTMCPQCERVAVSSSSS----TTCHPAAAAGVQRPSMPINPWAAVLPIER 283
           YMHMNPPTTLTMCPQCERVAVSSSSS    TT    AAAGVQRPSM INPW AVLPI+R
Sbjct: 241 YMHMNPPTTLTMCPQCERVAVSSSSSTSAATTTRHQAAAGVQRPSMAINPW-AVLPIQR 294

[Close]

BLAST of Cp4.1LG03g15670 vs. NCBI nr
Match: gi|567905816|ref|XP_006445396.1| (hypothetical protein CICLE_v10021501mg [Citrus clementina])

HSP 1 Score: 372.5 bits (955), Expect = 6.6e-100
Identity = 211/289 (73.01%), Postives = 233/289 (80.62%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHRPSN-SMHNHIRNGSWKELFQFSDRNADSR 60
           MG +DD L L+LSLG      PS +  H+   S+ SM NH +   W ELF  SDRN+D+R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTR 60

Query: 61  SFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCSQG 120
           SFLRGIDVN+ PTV D EEE GVSSPNSTVSSISGKRSERE   +   E EA RASCS+G
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGD---ETEAERASCSRG 120

Query: 121 SDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQ 180
           SD+EDGG GDASRKKLRLSKEQS++LEETFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 121 SDDEDGGAGDASRKKLRLSKEQSLLLEETFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSSSSTTCHPAAAAGVQRPSM--------PINPWAAVLPI 281
           CP CERVAVSSSSS++   AAA G  R  +        P++PWAA LPI
Sbjct: 241 CPSCERVAVSSSSSSS--SAAANGTTRLPIGPNHQRLTPVSPWAA-LPI 283

[Close]

BLAST of Cp4.1LG03g15670 vs. NCBI nr
Match: gi|1009143857|ref|XP_015889483.1| (PREDICTED: homeobox-leucine zipper protein HAT3 [Ziziphus jujuba])

HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97
Identity = 210/293 (71.67%), Postives = 229/293 (78.16%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGV-TTRPSFQPTHIHRPSNSMHNHIRNGSWKELFQFSDRNADSR 60
           MG +DD L L LSL LG   T+PS    + H PS  M NH    SW E+FQFSDRN+D+R
Sbjct: 1   MGEKDDGLGLALSLSLGCGRTQPS---PNKHNPSPPMQNH--KTSWSEIFQFSDRNSDTR 60

Query: 61  SFLRGIDVNRLPTVV-DGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCSQ 120
           SFLRG+DVNR P+VV D EEE GVSSPNST+SS SGKRSERE   E   E E  RASCS+
Sbjct: 61  SFLRGLDVNRTPSVVADFEEENGVSSPNSTISSASGKRSEREPIGE---ETEGERASCSR 120

Query: 121 GSDNEDGGGGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWF 180
            SD+EDG GGD SRKKLRLSKEQSMVLEETFKEHNTLNPKQK+ALAKQLNLR RQVEVWF
Sbjct: 121 ESDDEDGNGGDMSRKKLRLSKEQSMVLEETFKEHNTLNPKQKVALAKQLNLRARQVEVWF 180

Query: 181 QNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPTTLT 240
           QNRRARTKLKQTEVDCEYL+RCCENLT ENRRLQKEVQELRALKLSPQ+YMHM+PPTTLT
Sbjct: 181 QNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQMYMHMSPPTTLT 240

Query: 241 MCPQCERVAVSSSSSTTC--------------HPAAAAGVQRPSMPINPWAAV 278
           MCP CERVAVSSSSS+T                  A  GVQRP +P+NPWA +
Sbjct: 241 MCPSCERVAVSSSSSSTAVAPPSSTFGPTGPNRQPAVPGVQRP-VPMNPWATL 284

[Close]

BLAST of Cp4.1LG03g15670 vs. NCBI nr
Match: gi|802700296|ref|XP_012083669.1| (PREDICTED: homeobox-leucine zipper protein HAT3 [Jatropha curcas])

HSP 1 Score: 360.5 bits (924), Expect = 2.6e-96
Identity = 211/290 (72.76%), Postives = 232/290 (80.00%), Query Frame = 1


Query: 1   MGGRDDELRLTLSLGLGVTTRPSFQPTHIHR---PSNSMHNHIRNGSWKELFQFSDRNAD 60
           MG +DD L L LSLG G TT+ +     ++    PS  M N+    S  +LFQ SD+N+D
Sbjct: 1   MGEKDDGLGLGLSLGFGGTTQQNQSSLKLNLMPFPSQFMQNNHLRTSLNDLFQSSDKNSD 60

Query: 61  SRSFLRGIDVNRLPTVVDGEEEYGVSSPNSTVSSISGKRSEREAEAEAEAEAEASRASCS 120
           +RSF RGID+NR+PTVVD ++E GVSSPNST+SSISGKRSERE   E   EAEA R SCS
Sbjct: 61  ARSFQRGIDMNRIPTVVDCDDETGVSSPNSTISSISGKRSEREHIGE---EAEAERTSCS 120

Query: 121 QG-SDNEDGG-GGDASRKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVE 180
            G SD+EDGG GGDASRKKLRLSKEQS+VLEETFKEHNTLNPKQKLALAKQLNLRPRQVE
Sbjct: 121 HGGSDDEDGGAGGDASRKKLRLSKEQSLVLEETFKEHNTLNPKQKLALAKQLNLRPRQVE 180

Query: 181 VWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELRALKLSPQLYMHMNPPT 240
           VWFQNRRARTKLKQTEVDCEYLKRCCENLT ENRRLQKEVQELRALKLSPQLYMHMNPPT
Sbjct: 181 VWFQNRRARTKLKQTEVDCEYLKRCCENLTQENRRLQKEVQELRALKLSPQLYMHMNPPT 240

Query: 241 TLTMCPQCERVAVSSSSST--------TCHPAAAAGVQRPSMPINPWAAV 278
           TLTMCP CERVAVSSSSS+        T HP   +  QRP +PI PWAA+
Sbjct: 241 TLTMCPSCERVAVSSSSSSAAASSTALTRHP-VNSHPQRP-VPIKPWAAL 285

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g15670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HAT3_ARATH	6.0e-85	63.73	Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2	[more]
ATHB4_ARATH	7.6e-80	60.26	Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV...	[more]
HAT4_ARATH	1.1e-73	59.22	Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1	[more]
HAT2_ARATH	4.1e-65	56.69	Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=1 SV=2	[more]
HAT1_ARATH	2.6e-64	54.96	Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1	[more]

BLAST of Cp4.1LG03g15670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3P1_CUCSA	2.4e-120	82.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118080 PE=4 SV=1	[more]
A0A067HCG8_CITSI	4.6e-100	73.01	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023113mg PE=4 SV=1	[more]
V4U8Y0_9ROSI	4.6e-100	73.01	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1	[more]
A0A067JXY9_JATCU	1.8e-96	72.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14602 PE=4 SV=1	[more]
V4U3L9_9ROSI	2.4e-96	71.97	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1	[more]

BLAST of Cp4.1LG03g15670 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60390.1	3.4e-86	63.73	homeobox-leucine zipper protein 3	[more]
AT2G44910.1	4.3e-81	60.26	homeobox-leucine zipper protein 4	[more]
AT4G16780.1	6.0e-75	59.22	homeobox protein 2	[more]
AT5G47370.1	2.3e-66	56.69	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT4G17460.1	1.5e-65	54.96	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

BLAST of Cp4.1LG03g15670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074831\|ref\|XP_008437820.1\|	2.8e-122	84.33	PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis melo]	[more]
gi\|778676724\|ref\|XP_004133780.2\|	3.4e-120	82.27	PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis sativus]	[more]
gi\|567905816\|ref\|XP_006445396.1\|	6.6e-100	73.01	hypothetical protein CICLE_v10021501mg [Citrus clementina]	[more]
gi\|1009143857\|ref\|XP_015889483.1\|	1.8e-97	71.67	PREDICTED: homeobox-leucine zipper protein HAT3 [Ziziphus jujuba]	[more]
gi\|802700296\|ref\|XP_012083669.1\|	2.6e-96	72.76	PREDICTED: homeobox-leucine zipper protein HAT3 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR017970	Homeobox_CS
IPR009057	Homeobox-like_sf
IPR006712	HD-ZIP_N
IPR003106	Leu_zip_homeo
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009653	anatomical structure morphogenesis
biological_process	GO:0048731	system development
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g15670.1	Cp4.1LG03g15670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 132..186 score: 8.9
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 130..192 score: 1.5
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 128..188 score: 17
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 188..222 score: 2.4
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 188..231 score: 1.9
IPR006712	HD-ZIP protein, N-terminal	PFAM	PF04618	HD-ZIP_N	coord: 1..100 score: 3.2
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 110..186 score: 2.7
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 116..189 score: 2.65
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 163..186 scor
None	No IPR available	unknown	Coil	Coil	coord: 201..221 scor
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 69..277 score: 2.3E
None	No IPR available	PANTHER	PTHR24326:SF299	SUBFAMILY NOT NAMED	coord: 69..277 score: 2.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g15670	Cucsa.259710	Cucumber (Gy14) v1	cgycpeB0682
Cp4.1LG03g15670	CmaCh14G021460	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g15670	CmaCh06G010010	Cucurbita maxima (Rimu)	cmacpeB834
Cp4.1LG03g15670	CmoCh06G010040	Cucurbita moschata (Rifu)	cmocpeB787
Cp4.1LG03g15670	CmoCh14G022130	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g15670	Cla021107	Watermelon (97103) v1	cpewmB613
Cp4.1LG03g15670	Csa3G118080	Cucumber (Chinese Long) v2	cpecuB609
Cp4.1LG03g15670	MELO3C005978	Melon (DHL92) v3.5.1	cpemeB585
Cp4.1LG03g15670	ClCG05G000400	Watermelon (Charleston Gray)	cpewcgB559
Cp4.1LG03g15670	CSPI03G07430	Wild cucumber (PI 183967)	cpecpiB611
Cp4.1LG03g15670	MELO3C005978.2	Melon (DHL92) v3.6.1	cpemedB693
Cp4.1LG03g15670	CsaV3_3G007560	Cucumber (Chinese Long) v3	cpecucB0759
Cp4.1LG03g15670	Bhi01G000409	Wax gourd	cpewgoB0770
Cp4.1LG03g15670	Carg24158	Silver-seed gourd	carcpeB0144
Cp4.1LG03g15670	Carg17667	Silver-seed gourd	carcpeB0192

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g15670	Cp4.1LG08g00450	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g15670	Cucumber (Chinese Long) v3	cpecucB0774
Cp4.1LG03g15670	Wax gourd	cpewgoB0761
Cp4.1LG03g15670	Cucurbita pepo (Zucchini)	cpecpeB217
Cp4.1LG03g15670	Cucurbita pepo (Zucchini)	cpecpeB479
Cp4.1LG03g15670	Cucumber (Gy14) v1	cgycpeB0574
Cp4.1LG03g15670	Cucurbita maxima (Rimu)	cmacpeB839
Cp4.1LG03g15670	Cucurbita moschata (Rifu)	cmocpeB589
Cp4.1LG03g15670	Wild cucumber (PI 183967)	cpecpiB624
Cp4.1LG03g15670	Cucumber (Chinese Long) v2	cpecuB622
Cp4.1LG03g15670	Bottle gourd (USVL1VR-Ls)	cpelsiB506
Cp4.1LG03g15670	Cucumber (Gy14) v2	cgybcpeB406
Cp4.1LG03g15670	Melon (DHL92) v3.6.1	cpemedB651