CmaCh06G010010 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G010010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	HB transcription factor
Location	Cma_Chr06 : 6777916 .. 6780184 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTATGACATCTCTCTGCCGCATCGCCTGCTCGTTTTCCCACCCATTTTCTTTTCTCTCTGCTTTCCCGGAATCCAAACACTAATTAATTACTACTACCACTACTCCACCTCCACTTCTCTCTCCTATATATTTTTCATCATTGCGTTTCCTTCTCTGTAGTGTGTTTTTGATTCTCTGTTCCTTCCAAAATGGGCGGGAGCGACGACGAGTTATGTCTCAGTTTGAGTTTAGGGTTTGGAGTTACGACTCAGCCGAGTTACATCCACAGGCCTTCCAACTCCATGATTAATCACCTCCGTAGGAGCTCTTGGAAAGATGCGTTTCAAGTTTCTGGTAATTTCTTGATTTTGTGTTCTTCTCGTTTCATTGCGGTTTACTCTGGTTTTTTTTTTTGTTGGAGTTTTTTTCTGTTAGATCTGTGATTTTTGAAACATTATCGTTGTTTCTGAGGCGGATTTTGTTAATTTACGGTGTTCGTTTTTCGATTAAGTATCTGAATCGTCGTGTACTGTGTTATCATTTTGTTTGTTCAGATCGAAACGTCGATTCGAGGTCGTTTCTTAGGGGAATCGATGTGAATAGGCTGAGGACGGCGGTGGATGGCGAGGAAGAGAACGGCGTTTCATCTCCGAACAGTACGGTTTCTAGTATCAGTGGAAAGAGGAGCGAGAGAGAAGCCGTTGGAGATGAGGCGGAGGCCGAGAGAACCTCGTGCTCGCGAGGGAGCGACGATGAAGACGGCGGCGATGGTGATGGCGACGCCTCGAGAAAGAAGCTCAGGTTATCAAAGGAACAGTCGTTGGTTCTTGAGGAGACGTTCAAAGAGCACAACACGCTCAATGCTCAGGTTATCAAAGGAACAGTCGTTGGTTCTTGAGGAGACGTTCAAAGAGCACAACACGCTCAATCCAGTAAGTGGCAATCTGGTCATTTCATACGATTCTTCTCTTCACGTAGAGTTAATGATTGGTGGCAATTTCGGTAATTATTTGGGTTTAATAAGGGCGTTTTAGTCAATATTTCGGTTCAGTTGTAATGAAAAGACCTAACCTCCAGTTTAACGAAAGGGTTATTAAGTTAGTCAATATTTATTTAATTAATTAATTATTTATTTCTAAACGTCAGAAGCAAAAGCTGGCTCTTGCAAAACGGCTGAAATTTAATTAATTAATTATTTATTTCTAAACGTCAGAAGCAAAAGCTGGCTCTTGCAAAACGGCTGAATCTGAGACCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGTGAGCAAATTAATTCCGTATCCAGGGGTAGAATCGTAATATCAGGAGGAGTTGTTGCTTTCATAACTAATAAATGCTCTGCCACTGCATTTAAGTGTGAAGGTCAAAATTGTCATAGGAAGATTGTTGCGTCCATCATCAATGATATTCTTTTTCTTCATTACAGATAATGAGAATATCCCCAAAACTGCCATTGCCATTTGTTTAAGTGCTCCACGTGATCATTCTTAAATTTAAAACTTGTATAATATTTCATCATCCATTTTTGTCTGTTTTCTTTACCAAGTAAGAAAGGATTTGAATTTTTGATGGCGTTACGGGTAATGGTTAATGTGCAGGACCAAGCTGAAGCAGACAGAAGTGGATTGTGAGTACTTGAGGAGGTGCTGTGAGAATCTAACAGAGGAAAACAGAAGGCTACAGAAGGAGGTGCAAGAGTTGAGGGCACTCAAGCTTTCTCCGCAGCTCTATATGCACATGAACCCTCCTACCACTCTCACTATGTGCCCGCAGTGTGAGCGTGTGGCTGTTTCCTCGTTCTCGTCGACATCAGCTGCTTCGACTCACCATCCAGTAGCAGCTGGTATGCAGCAGCGGCCCTTGATGCCCATCGCCCCGCAGGCGGTGTTGCCGATCCAACGTTGATGGTTTCTTGTTGGGGGTTTGGAGATATTGGGTAGTTCTGTCCTTAACAAAACGTAGTTAGATTATGCAGAATGGGGGAGAGGAATGGACAATGAAATGATATATTTGGATGATCAATTGAAAGATGAATGGAGAGAACAAGGCATTTCTGTTTACTGTACAATTTCTCCATACCATAGCCTAAACGTCTGTCCAACCATTGCAAATGTCGATTATGATGGAAAGTATGAGAACCTCACGCATGACTAAGTGTTCACATGCATCGAGATATTTTCTTGTTACAATGAATACTATAATGTACATTACAAGACTGATTATGACATTTATGTTCGCTATGATGATACGACGA

mRNA sequence

AGCTATGACATCTCTCTGCCGCATCGCCTGCTCGTTTTCCCACCCATTTTCTTTTCTCTCTGCTTTCCCGGAATCCAAACACTAATTAATTACTACTACCACTACTCCACCTCCACTTCTCTCTCCTATATATTTTTCATCATTGCGTTTCCTTCTCTGTAGTGTGTTTTTGATTCTCTGTTCCTTCCAAAATGGGCGGGAGCGACGACGAGTTATGTCTCAGTTTGAGTTTAGGGTTTGGAGTTACGACTCAGCCGAGTTACATCCACAGGCCTTCCAACTCCATGATTAATCACCTCCGTAGGAGCTCTTGGAAAGATGCGTTTCAAGTTTCTGATCGAAACGTCGATTCGAGGTCGTTTCTTAGGGGAATCGATGTGAATAGGCTGAGGACGGCGGTGGATGGCGAGGAAGAGAACGGCGTTTCATCTCCGAACAGTACGGTTTCTAGTATCAGTGGAAAGAGGAGCGAGAGAGAAGCCGTTGGAGATGAGGCGGAGGCCGAGAGAACCTCGTGCTCGCGAGGGAGCGACGATGAAGACGGCGGCGATGGTGATGGCGACGCCTCGAGAAAGAAGCTCAGGTTATCAAAGGAACAGTCGTTGGTTCTTGAGGAGACGTTCAAAGAGCACAACACGCTCAATGCTCAGAAGCAAAAGCTGGCTCTTGCAAAACGGCTGAATCTGAGACCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGCTGAAGCAGACAGAAGTGGATTGTGAGTACTTGAGGAGGTGCTGTGAGAATCTAACAGAGGAAAACAGAAGGCTACAGAAGGAGGTGCAAGAGTTGAGGGCACTCAAGCTTTCTCCGCAGCTCTATATGCACATGAACCCTCCTACCACTCTCACTATGTGCCCGCAGTGTGAGCGTGTGGCTGTTTCCTCGTTCTCGTCGACATCAGCTGCTTCGACTCACCATCCAGTAGCAGCTGGTATGCAGCAGCGGCCCTTGATGCCCATCGCCCCGCAGGCGGTGTTGCCGATCCAACGTTGATGGTTTCTTGTTGGGGGTTTGGAGATATTGGGTAGTTCTGTCCTTAACAAAACGTAGTTAGATTATGCAGAATGGGGGAGAGGAATGGACAATGAAATGATATATTTGGATGATCAATTGAAAGATGAATGGAGAGAACAAGGCATTTCTGTTTACTGTACAATTTCTCCATACCATAGCCTAAACGTCTGTCCAACCATTGCAAATGTCGATTATGATGGAAAGTATGAGAACCTCACGCATGACTAAGTGTTCACATGCATCGAGATATTTTCTTGTTACAATGAATACTATAATGTACATTACAAGACTGATTATGACATTTATGTTCGCTATGATGATACGACGA

Coding sequence (CDS)

ATGGGCGGGAGCGACGACGAGTTATGTCTCAGTTTGAGTTTAGGGTTTGGAGTTACGACTCAGCCGAGTTACATCCACAGGCCTTCCAACTCCATGATTAATCACCTCCGTAGGAGCTCTTGGAAAGATGCGTTTCAAGTTTCTGATCGAAACGTCGATTCGAGGTCGTTTCTTAGGGGAATCGATGTGAATAGGCTGAGGACGGCGGTGGATGGCGAGGAAGAGAACGGCGTTTCATCTCCGAACAGTACGGTTTCTAGTATCAGTGGAAAGAGGAGCGAGAGAGAAGCCGTTGGAGATGAGGCGGAGGCCGAGAGAACCTCGTGCTCGCGAGGGAGCGACGATGAAGACGGCGGCGATGGTGATGGCGACGCCTCGAGAAAGAAGCTCAGGTTATCAAAGGAACAGTCGTTGGTTCTTGAGGAGACGTTCAAAGAGCACAACACGCTCAATGCTCAGAAGCAAAAGCTGGCTCTTGCAAAACGGCTGAATCTGAGACCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGCTGAAGCAGACAGAAGTGGATTGTGAGTACTTGAGGAGGTGCTGTGAGAATCTAACAGAGGAAAACAGAAGGCTACAGAAGGAGGTGCAAGAGTTGAGGGCACTCAAGCTTTCTCCGCAGCTCTATATGCACATGAACCCTCCTACCACTCTCACTATGTGCCCGCAGTGTGAGCGTGTGGCTGTTTCCTCGTTCTCGTCGACATCAGCTGCTTCGACTCACCATCCAGTAGCAGCTGGTATGCAGCAGCGGCCCTTGATGCCCATCGCCCCGCAGGCGGTGTTGCCGATCCAACGTTGA

Protein sequence

MGGSDDELCLSLSLGFGVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSFSSTSAASTHHPVAAGMQQRPLMPIAPQAVLPIQR

Homology

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BLAST of CmaCh06G010010 vs. Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-77
Identity = 189/315 (60.00%), Postives = 221/315 (70.16%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQ-PSYIHRP-------SNSMINHLRRSS----------WK 60
           M   DD L LSLSL  G   + PS    P       S+S + H+++S+          W 
Sbjct: 1   MSERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWI 60

Query: 61  DAFQVSDRNVDSRSFLRGIDVNRLRTAV--DGEEEN-GVSSPNSTVSSI-SGKRSERE-- 120
           + FQ S+RN D RSFLRGIDVNR  + V  D E+E  GVSSPNSTVSS+ SGK+SERE  
Sbjct: 61  NMFQSSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELM 120

Query: 121 ----AVG----DEAEAERTSCSRG--SDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKE 180
               AVG    ++ E ER SCS G  SDDEDG     D+SRKKLRLSKEQ+LVLEETFKE
Sbjct: 121 AAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKE 180

Query: 181 HNTLNAQKQKLALAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRR 240
           H+TLN  KQK+ALAK+LNLR RQVEVWFQNRRARTKLKQTEVDCEYL+RCCENLT+ENRR
Sbjct: 181 HSTLNP-KQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRR 240

Query: 241 LQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSFSSTSAASTHHPVAAGMQQR 282
           LQKEV ELRALKLSP LYMHM PPTTLTMCP CERVAV+S SS+ A    +         
Sbjct: 241 LQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMN------SSS 300

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BLAST of CmaCh06G010010 vs. Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-74
Identity = 179/292 (61.30%), Postives = 204/292 (69.86%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPS------------------YIHRPSN-SMINHLRRSSW 60
           MG  DD L LSLSLG     +PS                  ++H  +N S    +   SW
Sbjct: 1   MGERDDGLGLSLSLGNSQQKEPSLRLNLMPLTTSSSSSSFQHMHNQNNNSHPQKIHNISW 60

Query: 61  KDAFQVS-------DRNVDSRSFLRGIDVNRLRTAV---DGEEENGV-SSPNSTVSSISG 120
              FQ S       +RN D+ SFLRG +VNR +++V   D EEE  V SSPNS VSS+SG
Sbjct: 61  THLFQSSGIKRTTAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSG 120

Query: 121 KRSEREAV--GDEAEAERTSCSRG-----SDDEDGGDGDGDASRKKLRLSKEQSLVLEET 180
            + +      GDE EAER SCSRG     SDDEDGG+GDG  SRKKLRLSK+Q+LVLEET
Sbjct: 121 NKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDG--SRKKLRLSKDQALVLEET 180

Query: 181 FKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEE 240
           FKEH+TLN  KQKLALAK+LNLR RQVEVWFQNRRARTKLKQTEVDCEYL+RCC+NLTEE
Sbjct: 181 FKEHSTLNP-KQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEE 240

Query: 241 NRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSFSSTSAAST 256
           NRRLQKEV ELRALKLSP LYMHM PPTTLTMCP CERV+ S+ + T+A ST
Sbjct: 241 NRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPST 289

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BLAST of CmaCh06G010010 vs. Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.8e-72
Identity = 167/263 (63.50%), Postives = 187/263 (71.10%), Query Frame = 1


Query: 6   DELCLSLSLGF-----GVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDS-----R 65
           D+L LSL L F      + + PS    PS+S     RRSSW ++F  S  N DS     R
Sbjct: 6   DDLGLSLGLNFPKKQINLKSNPSVSVTPSSSSFGLFRRSSWNESFTSSVPNSDSSQKETR 65

Query: 66  SFLRGIDVNRL-RTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSD 125
           +F+RGIDVNR   TA  G+E+ GVSSPNSTVSS +GKRSERE      E      SRG  
Sbjct: 66  TFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSERE------EDTDPQGSRGIS 125

Query: 126 DEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWF 185
           D    D DGD SRKKLRLSK+QS +LEETFK+H+TLN  KQK ALAK+L LR RQVEVWF
Sbjct: 126 D----DEDGDNSRKKLRLSKDQSAILEETFKDHSTLN-PKQKQALAKQLGLRARQVEVWF 185

Query: 186 QNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLT 245
           QNRRARTKLKQTEVDCE+LRRCCENLTEENRRLQKEV ELRALKLSPQ YMHM+PPTTLT
Sbjct: 186 QNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLT 245

Query: 246 MCPQCERVAVSSFSSTSAASTHH 258
           MCP CE V+V      +A S HH
Sbjct: 246 MCPSCEHVSVPPPQPQAATSAHH 257

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BLAST of CmaCh06G010010 vs. Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=1 SV=2)

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-64
Identity = 157/267 (58.80%), Postives = 182/267 (68.16%), Query Frame = 1


Query: 6   DELCLSLSLGFGVTTQPSYIH-RPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRGIDVN 65
           ++L LSLSLGF     P  ++  P++S+ N+L+R  W   F       D  S LR IDVN
Sbjct: 6   EDLGLSLSLGFSQNHNPLQMNLNPNSSLSNNLQRLPWNQTF-------DPTSDLRKIDVN 65

Query: 66  RLRTAVDGEEENGVSSPNSTVSS-ISGKRSEREAVG----------DEAEAERTSCSRGS 125
              + V+ EE+ GVSSPNST+SS ISGKRSERE +           DE   +R   SRG+
Sbjct: 66  SFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDR-GYSRGT 125

Query: 126 DDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVW 185
            DE+  +  G+ SRKKLRLSK+QS  LEETFKEHNTLN  KQKLALAK+LNL  RQVEVW
Sbjct: 126 SDEE--EDGGETSRKKLRLSKDQSAFLEETFKEHNTLNP-KQKLALAKKLNLTARQVEVW 185

Query: 186 FQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTL 245
           FQNRRARTKLKQTEVDCEYL+RC E LTEENRRLQKE  ELR LKLSPQ Y  M PPTTL
Sbjct: 186 FQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTL 245

Query: 246 TMCPQCERVAVSSFSSTSAASTHHPVA 261
            MCP CER  V   SS++    H PV+
Sbjct: 246 IMCPSCER--VGGPSSSNHHHNHRPVS 259

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BLAST of CmaCh06G010010 vs. Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-62
Identity = 154/258 (59.69%), Postives = 182/258 (70.54%), Query Frame = 1


Query: 6   DELCLSLSLGFGVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRGIDVNR 65
           ++L LSLSLGF          +P++S +++L+   W     VS  +   + FLR IDVN 
Sbjct: 6   EDLGLSLSLGFAQNHPLQLNLKPTSSPMSNLQMFPWNQTL-VSSSDQQKQQFLRKIDVNS 65

Query: 66  LRTAVDGEEENGVSSPNSTVSS-ISGKR--SEREAV-----GDEAEAERT-SCSRGSDDE 125
           L T VD EEE GVSSPNST+SS +SGKR  +ERE       GD+ +     S SRG+ DE
Sbjct: 66  LPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDE 125

Query: 126 DGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQN 185
           +   G G+  RKKLRLSK+QS VLE+TFKEHNTLN  KQKLALAK+L L  RQVEVWFQN
Sbjct: 126 EEDYG-GETCRKKLRLSKDQSAVLEDTFKEHNTLNP-KQKLALAKKLGLTARQVEVWFQN 185

Query: 186 RRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMC 245
           RRARTKLKQTEVDCEYL+RC E LTEENRRL+KE  ELRALKLSP+LY  M+PPTTL MC
Sbjct: 186 RRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMC 245

Query: 246 PQCERVAVSSFSSTSAAS 255
           P CERVA  S S+ +  S
Sbjct: 246 PSCERVAGPSSSNHNQRS 260

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BLAST of CmaCh06G010010 vs. TrEMBL
Match: A0A0A0L3P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118080 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 2.3e-115
Identity = 235/296 (79.39%), Postives = 252/296 (85.14%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRG 60
           MGG DD++ L+LSLGFGVTTQ +++ RPS+   +HLR++ W + FQ SDRN DSRSFLRG
Sbjct: 1   MGGRDDDVGLTLSLGFGVTTQSTHMQRPSSMHNHHLRKTHWNELFQFSDRNADSRSFLRG 60

Query: 61  IDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAE--------------R 120
           IDVNRL T VDGEEENGVSSPNST+SSISGKRSEREA GDEAEAE              R
Sbjct: 61  IDVNRLPTGVDGEEENGVSSPNSTISSISGKRSEREAAGDEAEAEAEAEAEAEAEAEAER 120

Query: 121 TSCSRGSDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLR 180
            SCSRGSDDEDGG GDGDASRKKLRLSKEQS+VLEETFKEHNTLN  KQKLALAK+LNL 
Sbjct: 121 ASCSRGSDDEDGGGGDGDASRKKLRLSKEQSMVLEETFKEHNTLNP-KQKLALAKQLNLT 180

Query: 181 PRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMH 240
           PRQVEVWFQNRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELRALKLSPQLYMH
Sbjct: 181 PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQLYMH 240

Query: 241 MNPPTTLTMCPQCERVAVSSFSSTSAA-STHHPVAAGMQQRPLMPIAPQAVLPIQR 282
           MNPPTTLTMCPQCERVAVSS SSTSAA +T H  AAG+ QRP M I P AVLPIQR
Sbjct: 241 MNPPTTLTMCPQCERVAVSSSSSTSAATTTRHQAAAGV-QRPSMAINPWAVLPIQR 294

[Close]

BLAST of CmaCh06G010010 vs. TrEMBL
Match: A0A067HCG8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023113mg PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.7e-99
Identity = 211/286 (73.78%), Postives = 231/286 (80.77%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYI--HRP---SNSMINHLRRSSWKDAFQVSDRNVDSR 60
           MG  DD L LSLSLG     +PS    H P   S SM NH +RS W + F  SDRN D+R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTR 60

Query: 61  SFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSDD 120
           SFLRGIDVN+  T  D EEENGVSSPNSTVSSISGKRSERE +GDE EAER SCSRGSDD
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDD 120

Query: 121 EDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQ 180
           EDGG GD  ASRKKLRLSKEQSL+LEETFKEH+TLN  KQKLALAK+LNLRPRQVEVWFQ
Sbjct: 121 EDGGAGD--ASRKKLRLSKEQSLLLEETFKEHSTLNP-KQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSFSSTSAASTHHP--VAAGMQQRPLMPIAPQAVLPI 280
           CP CERVAVSS SS+S+A+ +    +  G   + L P++P A LPI
Sbjct: 241 CPSCERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPI 283

[Close]

BLAST of CmaCh06G010010 vs. TrEMBL
Match: V4U8Y0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.7e-99
Identity = 211/286 (73.78%), Postives = 231/286 (80.77%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYI--HRP---SNSMINHLRRSSWKDAFQVSDRNVDSR 60
           MG  DD L LSLSLG     +PS    H P   S SM NH +RS W + F  SDRN D+R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTR 60

Query: 61  SFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSDD 120
           SFLRGIDVN+  T  D EEENGVSSPNSTVSSISGKRSERE +GDE EAER SCSRGSDD
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDD 120

Query: 121 EDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQ 180
           EDGG GD  ASRKKLRLSKEQSL+LEETFKEH+TLN  KQKLALAK+LNLRPRQVEVWFQ
Sbjct: 121 EDGGAGD--ASRKKLRLSKEQSLLLEETFKEHSTLNP-KQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSFSSTSAASTHHP--VAAGMQQRPLMPIAPQAVLPI 280
           CP CERVAVSS SS+S+A+ +    +  G   + L P++P A LPI
Sbjct: 241 CPSCERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPI 283

[Close]

BLAST of CmaCh06G010010 vs. TrEMBL
Match: A0A067JXY9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14602 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.5e-98
Identity = 217/292 (74.32%), Postives = 237/292 (81.16%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSY-------IHRPSNSMINHLRRSSWKDAFQVSDRNVD 60
           MG  DD L L LSLGFG TTQ +        +  PS  M N+  R+S  D FQ SD+N D
Sbjct: 1   MGEKDDGLGLGLSLGFGGTTQQNQSSLKLNLMPFPSQFMQNNHLRTSLNDLFQSSDKNSD 60

Query: 61  SRSFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRG- 120
           +RSF RGID+NR+ T VD ++E GVSSPNST+SSISGKRSERE +G+EAEAERTSCS G 
Sbjct: 61  ARSFQRGIDMNRIPTVVDCDDETGVSSPNSTISSISGKRSEREHIGEEAEAERTSCSHGG 120

Query: 121 SDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEV 180
           SDDEDGG G GDASRKKLRLSKEQSLVLEETFKEHNTLN  KQKLALAK+LNLRPRQVEV
Sbjct: 121 SDDEDGGAG-GDASRKKLRLSKEQSLVLEETFKEHNTLNP-KQKLALAKQLNLRPRQVEV 180

Query: 181 WFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTT 240
           WFQNRRARTKLKQTEVDCEYL+RCCENLT+ENRRLQKEVQELRALKLSPQLYMHMNPPTT
Sbjct: 181 WFQNRRARTKLKQTEVDCEYLKRCCENLTQENRRLQKEVQELRALKLSPQLYMHMNPPTT 240

Query: 241 LTMCPQCERVAVSSFSSTSAAS----THHPVAAGMQQRPLMPIAPQAVLPIQ 281
           LTMCP CERVAVSS SS++AAS    T HPV +   QRP +PI P A LP Q
Sbjct: 241 LTMCPSCERVAVSSSSSSAAASSTALTRHPVNS-HPQRP-VPIKPWAALPNQ 288

[Close]

BLAST of CmaCh06G010010 vs. TrEMBL
Match: V4U3L9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.0e-95
Identity = 208/286 (72.73%), Postives = 228/286 (79.72%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYI--HRP---SNSMINHLRRSSWKDAFQVSDRNVDSR 60
           MG  DD L LSLSLG     +PS    H P   S SM NH +RS W + F  SD    +R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSD----TR 60

Query: 61  SFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSDD 120
           SFLRGIDVN+  T  D EEENGVSSPNSTVSSISGKRSERE +GDE EAER SCSRGSDD
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDD 120

Query: 121 EDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQ 180
           EDGG GD  ASRKKLRLSKEQSL+LEETFKEH+TLN  KQKLALAK+LNLRPRQVEVWFQ
Sbjct: 121 EDGGAGD--ASRKKLRLSKEQSLLLEETFKEHSTLNP-KQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSFSSTSAASTHHP--VAAGMQQRPLMPIAPQAVLPI 280
           CP CERVAVSS SS+S+A+ +    +  G   + L P++P A LPI
Sbjct: 241 CPSCERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPI 279

[Close]

BLAST of CmaCh06G010010 vs. TAIR10
Match: AT3G60390.1 (AT3G60390.1 homeobox-leucine zipper protein 3)

HSP 1 Score: 291.2 bits (744), Expect = 6.8e-79
Identity = 189/315 (60.00%), Postives = 221/315 (70.16%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQ-PSYIHRP-------SNSMINHLRRSS----------WK 60
           M   DD L LSLSL  G   + PS    P       S+S + H+++S+          W 
Sbjct: 1   MSERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWI 60

Query: 61  DAFQVSDRNVDSRSFLRGIDVNRLRTAV--DGEEEN-GVSSPNSTVSSI-SGKRSERE-- 120
           + FQ S+RN D RSFLRGIDVNR  + V  D E+E  GVSSPNSTVSS+ SGK+SERE  
Sbjct: 61  NMFQSSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELM 120

Query: 121 ----AVG----DEAEAERTSCSRG--SDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKE 180
               AVG    ++ E ER SCS G  SDDEDG     D+SRKKLRLSKEQ+LVLEETFKE
Sbjct: 121 AAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKE 180

Query: 181 HNTLNAQKQKLALAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRR 240
           H+TLN  KQK+ALAK+LNLR RQVEVWFQNRRARTKLKQTEVDCEYL+RCCENLT+ENRR
Sbjct: 181 HSTLNP-KQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRR 240

Query: 241 LQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSFSSTSAASTHHPVAAGMQQR 282
           LQKEV ELRALKLSP LYMHM PPTTLTMCP CERVAV+S SS+ A    +         
Sbjct: 241 LQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMN------SSS 300

[Close]

BLAST of CmaCh06G010010 vs. TAIR10
Match: AT2G44910.1 (AT2G44910.1 homeobox-leucine zipper protein 4)

HSP 1 Score: 280.8 bits (717), Expect = 9.3e-76
Identity = 179/292 (61.30%), Postives = 204/292 (69.86%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPS------------------YIHRPSN-SMINHLRRSSW 60
           MG  DD L LSLSLG     +PS                  ++H  +N S    +   SW
Sbjct: 1   MGERDDGLGLSLSLGNSQQKEPSLRLNLMPLTTSSSSSSFQHMHNQNNNSHPQKIHNISW 60

Query: 61  KDAFQVS-------DRNVDSRSFLRGIDVNRLRTAV---DGEEENGV-SSPNSTVSSISG 120
              FQ S       +RN D+ SFLRG +VNR +++V   D EEE  V SSPNS VSS+SG
Sbjct: 61  THLFQSSGIKRTTAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSG 120

Query: 121 KRSEREAV--GDEAEAERTSCSRG-----SDDEDGGDGDGDASRKKLRLSKEQSLVLEET 180
            + +      GDE EAER SCSRG     SDDEDGG+GDG  SRKKLRLSK+Q+LVLEET
Sbjct: 121 NKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDG--SRKKLRLSKDQALVLEET 180

Query: 181 FKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEE 240
           FKEH+TLN  KQKLALAK+LNLR RQVEVWFQNRRARTKLKQTEVDCEYL+RCC+NLTEE
Sbjct: 181 FKEHSTLNP-KQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEE 240

Query: 241 NRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPQCERVAVSSFSSTSAAST 256
           NRRLQKEV ELRALKLSP LYMHM PPTTLTMCP CERV+ S+ + T+A ST
Sbjct: 241 NRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPST 289

[Close]

BLAST of CmaCh06G010010 vs. TAIR10
Match: AT4G16780.1 (AT4G16780.1 homeobox protein 2)

HSP 1 Score: 272.3 bits (695), Expect = 3.3e-73
Identity = 167/263 (63.50%), Postives = 187/263 (71.10%), Query Frame = 1


Query: 6   DELCLSLSLGF-----GVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDS-----R 65
           D+L LSL L F      + + PS    PS+S     RRSSW ++F  S  N DS     R
Sbjct: 6   DDLGLSLGLNFPKKQINLKSNPSVSVTPSSSSFGLFRRSSWNESFTSSVPNSDSSQKETR 65

Query: 66  SFLRGIDVNRL-RTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSD 125
           +F+RGIDVNR   TA  G+E+ GVSSPNSTVSS +GKRSERE      E      SRG  
Sbjct: 66  TFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSERE------EDTDPQGSRGIS 125

Query: 126 DEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWF 185
           D    D DGD SRKKLRLSK+QS +LEETFK+H+TLN  KQK ALAK+L LR RQVEVWF
Sbjct: 126 D----DEDGDNSRKKLRLSKDQSAILEETFKDHSTLN-PKQKQALAKQLGLRARQVEVWF 185

Query: 186 QNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLT 245
           QNRRARTKLKQTEVDCE+LRRCCENLTEENRRLQKEV ELRALKLSPQ YMHM+PPTTLT
Sbjct: 186 QNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLT 245

Query: 246 MCPQCERVAVSSFSSTSAASTHH 258
           MCP CE V+V      +A S HH
Sbjct: 246 MCPSCEHVSVPPPQPQAATSAHH 257

[Close]

BLAST of CmaCh06G010010 vs. TAIR10
Match: AT5G47370.1 (AT5G47370.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein)

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-65
Identity = 157/267 (58.80%), Postives = 182/267 (68.16%), Query Frame = 1


Query: 6   DELCLSLSLGFGVTTQPSYIH-RPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRGIDVN 65
           ++L LSLSLGF     P  ++  P++S+ N+L+R  W   F       D  S LR IDVN
Sbjct: 6   EDLGLSLSLGFSQNHNPLQMNLNPNSSLSNNLQRLPWNQTF-------DPTSDLRKIDVN 65

Query: 66  RLRTAVDGEEENGVSSPNSTVSS-ISGKRSEREAVG----------DEAEAERTSCSRGS 125
              + V+ EE+ GVSSPNST+SS ISGKRSERE +           DE   +R   SRG+
Sbjct: 66  SFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDR-GYSRGT 125

Query: 126 DDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVW 185
            DE+  +  G+ SRKKLRLSK+QS  LEETFKEHNTLN  KQKLALAK+LNL  RQVEVW
Sbjct: 126 SDEE--EDGGETSRKKLRLSKDQSAFLEETFKEHNTLNP-KQKLALAKKLNLTARQVEVW 185

Query: 186 FQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTL 245
           FQNRRARTKLKQTEVDCEYL+RC E LTEENRRLQKE  ELR LKLSPQ Y  M PPTTL
Sbjct: 186 FQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTL 245

Query: 246 TMCPQCERVAVSSFSSTSAASTHHPVA 261
            MCP CER  V   SS++    H PV+
Sbjct: 246 IMCPSCER--VGGPSSSNHHHNHRPVS 259

[Close]

BLAST of CmaCh06G010010 vs. TAIR10
Match: AT4G17460.1 (AT4G17460.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein)

HSP 1 Score: 241.5 bits (615), Expect = 6.2e-64
Identity = 154/258 (59.69%), Postives = 182/258 (70.54%), Query Frame = 1


Query: 6   DELCLSLSLGFGVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRGIDVNR 65
           ++L LSLSLGF          +P++S +++L+   W     VS  +   + FLR IDVN 
Sbjct: 6   EDLGLSLSLGFAQNHPLQLNLKPTSSPMSNLQMFPWNQTL-VSSSDQQKQQFLRKIDVNS 65

Query: 66  LRTAVDGEEENGVSSPNSTVSS-ISGKR--SEREAV-----GDEAEAERT-SCSRGSDDE 125
           L T VD EEE GVSSPNST+SS +SGKR  +ERE       GD+ +     S SRG+ DE
Sbjct: 66  LPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDE 125

Query: 126 DGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQN 185
           +   G G+  RKKLRLSK+QS VLE+TFKEHNTLN  KQKLALAK+L L  RQVEVWFQN
Sbjct: 126 EEDYG-GETCRKKLRLSKDQSAVLEDTFKEHNTLNP-KQKLALAKKLGLTARQVEVWFQN 185

Query: 186 RRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMC 245
           RRARTKLKQTEVDCEYL+RC E LTEENRRL+KE  ELRALKLSP+LY  M+PPTTL MC
Sbjct: 186 RRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMC 245

Query: 246 PQCERVAVSSFSSTSAAS 255
           P CERVA  S S+ +  S
Sbjct: 246 PSCERVAGPSSSNHNQRS 260

[Close]

BLAST of CmaCh06G010010 vs. NCBI nr
Match: gi|659074831|ref|XP_008437820.1| (PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis melo])

HSP 1 Score: 429.5 bits (1103), Expect = 4.6e-117
Identity = 240/296 (81.08%), Postives = 254/296 (85.81%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRG 60
           MGG DD+L L+LSLGFGVTTQP+++ RPS  M NHLR++SW + FQ SDRN DSRSFLRG
Sbjct: 1   MGGRDDDLGLTLSLGFGVTTQPTHMQRPS--MHNHLRKTSWNELFQFSDRNADSRSFLRG 60

Query: 61  IDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAE--------------R 120
           IDVNRL T VDGEEENGVSSPNST+SSISGKRSEREA GDEAEAE              R
Sbjct: 61  IDVNRLPTGVDGEEENGVSSPNSTISSISGKRSEREAAGDEAEAEAEAEAEAEAEAEAER 120

Query: 121 TSCSRGSDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLR 180
            SCSRGSDDEDGG GDGDASRKKLRLSKEQS+VLEETFKEHNTLN  KQKLALAK+LNL 
Sbjct: 121 ASCSRGSDDEDGGGGDGDASRKKLRLSKEQSMVLEETFKEHNTLNP-KQKLALAKQLNLT 180

Query: 181 PRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMH 240
           PRQVEVWFQNRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELRALKLSPQLYMH
Sbjct: 181 PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQLYMH 240

Query: 241 MNPPTTLTMCPQCERVAVSSFSSTSAA-STHHPVAAGMQQRPLMPIAPQAVLPIQR 282
           MNPPTTLTMCPQCERVAVSS SSTSAA +T HP AAG+ QR  M I P AVLPIQR
Sbjct: 241 MNPPTTLTMCPQCERVAVSSSSSTSAATTTRHPAAAGV-QRTSMAINPWAVLPIQR 292

[Close]

BLAST of CmaCh06G010010 vs. NCBI nr
Match: gi|778676724|ref|XP_004133780.2| (PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 3.3e-115
Identity = 235/296 (79.39%), Postives = 252/296 (85.14%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYIHRPSNSMINHLRRSSWKDAFQVSDRNVDSRSFLRG 60
           MGG DD++ L+LSLGFGVTTQ +++ RPS+   +HLR++ W + FQ SDRN DSRSFLRG
Sbjct: 1   MGGRDDDVGLTLSLGFGVTTQSTHMQRPSSMHNHHLRKTHWNELFQFSDRNADSRSFLRG 60

Query: 61  IDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAE--------------R 120
           IDVNRL T VDGEEENGVSSPNST+SSISGKRSEREA GDEAEAE              R
Sbjct: 61  IDVNRLPTGVDGEEENGVSSPNSTISSISGKRSEREAAGDEAEAEAEAEAEAEAEAEAER 120

Query: 121 TSCSRGSDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLR 180
            SCSRGSDDEDGG GDGDASRKKLRLSKEQS+VLEETFKEHNTLN  KQKLALAK+LNL 
Sbjct: 121 ASCSRGSDDEDGGGGDGDASRKKLRLSKEQSMVLEETFKEHNTLNP-KQKLALAKQLNLT 180

Query: 181 PRQVEVWFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMH 240
           PRQVEVWFQNRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELRALKLSPQLYMH
Sbjct: 181 PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRALKLSPQLYMH 240

Query: 241 MNPPTTLTMCPQCERVAVSSFSSTSAA-STHHPVAAGMQQRPLMPIAPQAVLPIQR 282
           MNPPTTLTMCPQCERVAVSS SSTSAA +T H  AAG+ QRP M I P AVLPIQR
Sbjct: 241 MNPPTTLTMCPQCERVAVSSSSSTSAATTTRHQAAAGV-QRPSMAINPWAVLPIQR 294

[Close]

BLAST of CmaCh06G010010 vs. NCBI nr
Match: gi|567905816|ref|XP_006445396.1| (hypothetical protein CICLE_v10021501mg [Citrus clementina])

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-98
Identity = 211/286 (73.78%), Postives = 231/286 (80.77%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYI--HRP---SNSMINHLRRSSWKDAFQVSDRNVDSR 60
           MG  DD L LSLSLG     +PS    H P   S SM NH +RS W + F  SDRN D+R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSDRNSDTR 60

Query: 61  SFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSDD 120
           SFLRGIDVN+  T  D EEENGVSSPNSTVSSISGKRSERE +GDE EAER SCSRGSDD
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDD 120

Query: 121 EDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQ 180
           EDGG GD  ASRKKLRLSKEQSL+LEETFKEH+TLN  KQKLALAK+LNLRPRQVEVWFQ
Sbjct: 121 EDGGAGD--ASRKKLRLSKEQSLLLEETFKEHSTLNP-KQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSFSSTSAASTHHP--VAAGMQQRPLMPIAPQAVLPI 280
           CP CERVAVSS SS+S+A+ +    +  G   + L P++P A LPI
Sbjct: 241 CPSCERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPI 283

[Close]

BLAST of CmaCh06G010010 vs. NCBI nr
Match: gi|802700296|ref|XP_012083669.1| (PREDICTED: homeobox-leucine zipper protein HAT3 [Jatropha curcas])

HSP 1 Score: 366.7 bits (940), Expect = 3.6e-98
Identity = 217/292 (74.32%), Postives = 237/292 (81.16%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSY-------IHRPSNSMINHLRRSSWKDAFQVSDRNVD 60
           MG  DD L L LSLGFG TTQ +        +  PS  M N+  R+S  D FQ SD+N D
Sbjct: 1   MGEKDDGLGLGLSLGFGGTTQQNQSSLKLNLMPFPSQFMQNNHLRTSLNDLFQSSDKNSD 60

Query: 61  SRSFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRG- 120
           +RSF RGID+NR+ T VD ++E GVSSPNST+SSISGKRSERE +G+EAEAERTSCS G 
Sbjct: 61  ARSFQRGIDMNRIPTVVDCDDETGVSSPNSTISSISGKRSEREHIGEEAEAERTSCSHGG 120

Query: 121 SDDEDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEV 180
           SDDEDGG G GDASRKKLRLSKEQSLVLEETFKEHNTLN  KQKLALAK+LNLRPRQVEV
Sbjct: 121 SDDEDGGAG-GDASRKKLRLSKEQSLVLEETFKEHNTLNP-KQKLALAKQLNLRPRQVEV 180

Query: 181 WFQNRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTT 240
           WFQNRRARTKLKQTEVDCEYL+RCCENLT+ENRRLQKEVQELRALKLSPQLYMHMNPPTT
Sbjct: 181 WFQNRRARTKLKQTEVDCEYLKRCCENLTQENRRLQKEVQELRALKLSPQLYMHMNPPTT 240

Query: 241 LTMCPQCERVAVSSFSSTSAAS----THHPVAAGMQQRPLMPIAPQAVLPIQ 281
           LTMCP CERVAVSS SS++AAS    T HPV +   QRP +PI P A LP Q
Sbjct: 241 LTMCPSCERVAVSSSSSSAAASSTALTRHPVNS-HPQRP-VPIKPWAALPNQ 288

[Close]

BLAST of CmaCh06G010010 vs. NCBI nr
Match: gi|567905814|ref|XP_006445395.1| (hypothetical protein CICLE_v10021501mg [Citrus clementina])

HSP 1 Score: 357.1 bits (915), Expect = 2.9e-95
Identity = 208/286 (72.73%), Postives = 228/286 (79.72%), Query Frame = 1


Query: 1   MGGSDDELCLSLSLGFGVTTQPSYI--HRP---SNSMINHLRRSSWKDAFQVSDRNVDSR 60
           MG  DD L LSLSLG     +PS    H P   S SM NH +RS W + F  SD    +R
Sbjct: 1   MGEKDDGLGLSLSLGCAARNEPSLRLNHMPLSSSQSMQNHHKRSPWTELFHSSD----TR 60

Query: 61  SFLRGIDVNRLRTAVDGEEENGVSSPNSTVSSISGKRSEREAVGDEAEAERTSCSRGSDD 120
           SFLRGIDVN+  T  D EEENGVSSPNSTVSSISGKRSERE +GDE EAER SCSRGSDD
Sbjct: 61  SFLRGIDVNQAPTVADCEEENGVSSPNSTVSSISGKRSEREPIGDETEAERASCSRGSDD 120

Query: 121 EDGGDGDGDASRKKLRLSKEQSLVLEETFKEHNTLNAQKQKLALAKRLNLRPRQVEVWFQ 180
           EDGG GD  ASRKKLRLSKEQSL+LEETFKEH+TLN  KQKLALAK+LNLRPRQVEVWFQ
Sbjct: 121 EDGGAGD--ASRKKLRLSKEQSLLLEETFKEHSTLNP-KQKLALAKQLNLRPRQVEVWFQ 180

Query: 181 NRRARTKLKQTEVDCEYLRRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTM 240
           NRRARTKLKQTEVDCEYL+RCCENLTEENRRLQKEVQELR+LKLSPQLYM+MNPPTTLTM
Sbjct: 181 NRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELRSLKLSPQLYMNMNPPTTLTM 240

Query: 241 CPQCERVAVSSFSSTSAASTHHP--VAAGMQQRPLMPIAPQAVLPI 280
           CP CERVAVSS SS+S+A+ +    +  G   + L P++P A LPI
Sbjct: 241 CPSCERVAVSSSSSSSSAAANGTTRLPIGPNHQRLTPVSPWAALPI 279

The following BLAST results are available for this feature:

BLAST of CmaCh06G010010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HAT3_ARATH	1.2e-77	60.00	Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2	[more]
ATHB4_ARATH	1.6e-74	61.30	Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV...	[more]
HAT4_ARATH	5.8e-72	63.50	Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1	[more]
HAT2_ARATH	2.6e-64	58.80	Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=1 SV=2	[more]
HAT1_ARATH	1.1e-62	59.69	Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1	[more]

BLAST of CmaCh06G010010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3P1_CUCSA	2.3e-115	79.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118080 PE=4 SV=1	[more]
A0A067HCG8_CITSI	8.7e-99	73.78	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023113mg PE=4 SV=1	[more]
V4U8Y0_9ROSI	8.7e-99	73.78	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1	[more]
A0A067JXY9_JATCU	2.5e-98	74.32	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14602 PE=4 SV=1	[more]
V4U3L9_9ROSI	2.0e-95	72.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021501mg PE=4 SV=1	[more]

BLAST of CmaCh06G010010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60390.1	6.8e-79	60.00	homeobox-leucine zipper protein 3	[more]
AT2G44910.1	9.3e-76	61.30	homeobox-leucine zipper protein 4	[more]
AT4G16780.1	3.3e-73	63.50	homeobox protein 2	[more]
AT5G47370.1	1.5e-65	58.80	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT4G17460.1	6.2e-64	59.69	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

BLAST of CmaCh06G010010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074831\|ref\|XP_008437820.1\|	4.6e-117	81.08	PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis melo]	[more]
gi\|778676724\|ref\|XP_004133780.2\|	3.3e-115	79.39	PREDICTED: homeobox-leucine zipper protein HAT3-like [Cucumis sativus]	[more]
gi\|567905816\|ref\|XP_006445396.1\|	1.2e-98	73.78	hypothetical protein CICLE_v10021501mg [Citrus clementina]	[more]
gi\|802700296\|ref\|XP_012083669.1\|	3.6e-98	74.32	PREDICTED: homeobox-leucine zipper protein HAT3 [Jatropha curcas]	[more]
gi\|567905814\|ref\|XP_006445395.1\|	2.9e-95	72.73	hypothetical protein CICLE_v10021501mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001356	Homeobox_dom
IPR003106	Leu_zip_homeo
IPR006712	HD-ZIP_N
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G010010.1	CmaCh06G010010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 127..182 score: 2.3
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 125..188 score: 4.3
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 123..184 score: 16
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 184..218 score: 2.9
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 184..227 score: 1.5
IPR006712	HD-ZIP protein, N-terminal	PFAM	PF04618	HD-ZIP_N	coord: 1..96 score: 2.9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 109..178 score: 7.4
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 112..185 score: 1.2
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 159..182 scor
None	No IPR available	unknown	Coil	Coil	coord: 190..220 scor
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 65..281 score: 8.5E
None	No IPR available	PANTHER	PTHR24326:SF299	SUBFAMILY NOT NAMED	coord: 65..281 score: 8.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G010010	Cucsa.259710	Cucumber (Gy14) v1	cgycmaB0725
CmaCh06G010010	Cla021107	Watermelon (97103) v1	cmawmB803
CmaCh06G010010	Csa3G118080	Cucumber (Chinese Long) v2	cmacuB830
CmaCh06G010010	MELO3C005978	Melon (DHL92) v3.5.1	cmameB771
CmaCh06G010010	ClCG05G000400	Watermelon (Charleston Gray)	cmawcgB742
CmaCh06G010010	CSPI03G07430	Wild cucumber (PI 183967)	cmacpiB843
CmaCh06G010010	CmoCh06G010040	Cucurbita moschata (Rifu)	cmacmoB832
CmaCh06G010010	Lsi05G021810	Bottle gourd (USVL1VR-Ls)	cmalsiB760
CmaCh06G010010	Cp4.1LG03g15670	Cucurbita pepo (Zucchini)	cmacpeB834
CmaCh06G010010	Cp4.1LG08g00450	Cucurbita pepo (Zucchini)	cmacpeB848
CmaCh06G010010	MELO3C005978.2	Melon (DHL92) v3.6.1	cmamedB873
CmaCh06G010010	CsaV3_3G007560	Cucumber (Chinese Long) v3	cmacucB0980
CmaCh06G010010	Cla97C05G080370	Watermelon (97103) v2	cmawmbB862
CmaCh06G010010	Bhi01G000409	Wax gourd	cmawgoB1011
CmaCh06G010010	CsGy3G007570	Cucumber (Gy14) v2	cgybcmaB443
CmaCh06G010010	Carg17667	Silver-seed gourd	carcmaB0176

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G010010	CmaCh14G021460	Cucurbita maxima (Rimu)	cmacmaB281

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G010010	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G010010	Watermelon (97103) v2	cmawmbB859
CmaCh06G010010	Wax gourd	cmawgoB1021
CmaCh06G010010	Cucurbita maxima (Rimu)	cmacmaB023
CmaCh06G010010	Cucumber (Gy14) v1	cgycmaB0728
CmaCh06G010010	Cucurbita moschata (Rifu)	cmacmoB795
CmaCh06G010010	Cucurbita moschata (Rifu)	cmacmoB799
CmaCh06G010010	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G010010	Wild cucumber (PI 183967)	cmacpiB830
CmaCh06G010010	Cucumber (Chinese Long) v2	cmacuB818
CmaCh06G010010	Melon (DHL92) v3.5.1	cmameB766
CmaCh06G010010	Watermelon (Charleston Gray)	cmawcgB738
CmaCh06G010010	Watermelon (97103) v1	cmawmB799
CmaCh06G010010	Cucurbita pepo (Zucchini)	cmacpeB839
CmaCh06G010010	Bottle gourd (USVL1VR-Ls)	cmalsiB770
CmaCh06G010010	Cucumber (Gy14) v2	cgybcmaB430
CmaCh06G010010	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G010010	Silver-seed gourd	carcmaB0164