Cp4.1LG03g14560 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g14560
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 3
LocationCp4.1LG03 : 8737994 .. 8740613 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAGTAAATGACTAAATAGCCCCTGACAAAATTGGACTAGAGAAAAAAAAGTCAAAAAGTAGGAGGAGAAGAAGAAGAGTGAAAGAAAATGTAGCAGATCGAATAATCAAATCACTCGAATCTCGCAGATGTCGATGAGAAATCCCCAGAAGATATTGCACAGAACAGAGCTTACTTCAAAACATGCAATGGATGCATTCGATGCTTAAAGTACCTTCTCTACTTCTCCATTTTAATCCATTTTATTTGTCTCGCTTCTTTTCTTTTTTTCACTAAATCCTCTCATTCAGCCGCTTCAACACTGATTCACTGCCCCTTTCTTTGTATGATTCAATGTTGAAACCTAGGAACAGTGATTAAATGGATCGTTTGCTTGCTTCCGAGGTTTTAACTTTGATATCATTATACTTTCATTTGGGGTGTTAAGAATTGGTATCTTCAATCTTGGGTCTGCAGACTGAGAGACCACTAATTAGTGCCTGCCAGGTGTTTGATGATTTGCCTGTGTGACTGTTTAAGTCTATTATCATAAACCGTCCAATCTAAATCTATCGTTAGTAAAGATTGTCTGCATTTGCCCATTACTGCATCTTCGTCAGTTTCACGGTTTTAAAACACGTTTATAAGAAGAGGTTTCCACACCATTATAAGAAATATTTTGTTCCCCTCTCAAAGAAGACAATTCTATCACACTTCTCCCGATAGAGTCAAAAAACTATTAAACTTTCATTTGGGGTGTTAAGAATTGCTGTCATGAATGGTGGGTAATAAGAAGAAGGAACATGTGCCATGTAAGTTTGATATGAAGGGAGAACGTGGCCGTGACTGAGGGGAAACAGACAAATTTGGATGTGATAGTTTTTGTGTGGATTAAATCTAACTTCATTTATTGCTTGCGATTGGGACTGTAAAGCAAAATTAATTGGGACACCCTCCACACACCAACGGCTCTTGATTGCCATCTATTACGTTCTTGTTCTCAAGCTACTGATTTGATTTGTAAAAGGGGGTTGCCCCCATTTGAAGTAGCTTATTTAAATTATTAACTAACTCAATGAAGTTTTGTGTAGGGCTGAATGTGTTGAGAACCTCAGACATTGATACCATTTTCCTTGTTTTGAATATACAGCCCTCTGTCACTCGATCTTTTCTTCTTTAAATAGGAATAAAACTATCAGAGTGAAATAAAGGCCCTGCAGTCTTGGTAGCTGCTAGTTTTTCATTTTTTCTTGTGAATATTTACATTGCTTCTGCTGCTATGTCAGAGCCTAGAAAGAAAGGGTGGGGGTGGCTGTTATGGCATTGATCACTGTATTGGTTCATTTACTAGACTGCTTTGGCAGTGAGTGAAAGAGAGAGCCTGGATTGTATTGGAAAGGCCACAAAACCCAAAAAAAAAAAAAACAAAAAAAAGAAGTAAAGGCCATTTCAACACCTCATTTCTTGCATTCTTGTTGGTTACGGTCAGTAGATATTGTCGATGTGGGATCTCTTAGTTATCTTCAATAAGTATGTTATAATGGCCCAAGTCCACCACTCGTAGATATTGTTTTCTTTAGGTTTTCCTTTTTAGACTTCCTCAAAGTTTTTAAAAGGAGAAGTTTCCCCCCTTTATAATGAATGTTTTTGTTCTACCCCAACTAATGTGGGATCTCTCAGTTGTCTTTGATAAGTTTGTTGTAAGGATCCAAACCAACCCACCGCTAGTAAATATTGTTCTCTTTAGGTTTTTTCTTTCAAGCTTCCCTTTAAGATTTTTAAAACGCATTTGTCAAAGAGAGATTTTCAACCCTTTATAAAAAATTATTCGTCCTCACCGAGAAGCTTAGCTTGGCTAGGCTTCCCTGCATAACTCTTTGATAAGGATACATTACTTGTTTATAACCCCAAATCTCTCTGCCAGTCCTAAGATAGACGCCAAGAGGGAGAGAGAGAGAGAGAGAAAGGATCTGAGTTTGGGTATGGGGAAATGTGAAGCCGCTTGAGAGGCCTAATTTTCTTCTACCTTCTTCTTATAACCCAAATCATTTCCATTTTTACCCATTTATCATCTCAATCCCACCATAATCATCATTATTATCATTTAAGCTTTAGAAGAAGAAGACATGAAAGGAACATACTGTTGTTGTTGTTGTTTTATATTGACTCTGCAATTAGCTTGTTGGGTTTCTGCAGCAACCACAACTTTTGCTCTCCTTCCTCATAAACAACAAGGTTCTTACAACTTCCTTTCCTCTTTTTGGTTCTTCAACCAAATCTCTCGATAGCAGACGTATTTTAAAAACCTTAAGAGAAAGTTCAATATCTGTTAGCAGTGGGCGTGAACCGTTACATCTTCTTCTTTTAACTCAAATTGCTTGCTTGTTGCTGCTTCCAGGTTTCAATGTTGATTCTGTGAAGGCTGTTGAAGAAGGTGTAGTAAAAGAGGGAGAAGTTTATAGAGGGATGAGGAAAATAGGGTCGAGTCCGCCGAGCTGTGAGCACAAATGCTATGGTTGCACACCATGTGAAGCCATTCAAGTGCCTACCAACAACAGGCGCAGCCATGTGGGGATCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCT

mRNA sequence

CAGAGTAAATGACTAAATAGCCCCTGACAAAATTGGACTAGAGAAAAAAAAGTCAAAAAGTAGGAGGAGAAGAAGAAGAGTGAAAGAAAATGTAGCAGATCGAATAATCAAATCACTCGAATCTCGCAGATGTCGATGAGAAATCCCCAGAAGATATTGCACAGAACAGAGCTTACTTCAAAACATGCAATGGATGCATTCGATGCTTAAAAGGGATGAGGAAAATAGGGTCGAGTCCGCCGAGCTGTGAGCACAAATGCTATGGTTGCACACCATGTGAAGCCATTCAAGTGCCTACCAACAACAGGCGCAGCCATGTGGGGATCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCT

Coding sequence (CDS)

ATGAGGAAAATAGGGTCGAGTCCGCCGAGCTGTGAGCACAAATGCTATGGTTGCACACCATGTGAAGCCATTCAAGTGCCTACCAACAACAGGCGCAGCCATGTGGGGATCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCT

Protein sequence

MRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP
Homology
[Close]
BLAST of Cp4.1LG03g14560 vs. Swiss-Prot
Match: EPFL3_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.7e-16
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 1 

Query: 2   RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGP 54
           R+IGS PPSCE KCYGC PCEAIQ PT +   H+   Y NY+PEGW+C C P
Sbjct: 55  RRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHCPP 106

[Close]
BLAST of Cp4.1LG03g14560 vs. Swiss-Prot
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 5.9e-11
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 1 

Query: 3   KIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSH--------------------VGIQYTNY 59
           ++GS+PPSC ++C  C PC AIQVPT   RS                     V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]
BLAST of Cp4.1LG03g14560 vs. Swiss-Prot
Match: EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.4e-09
Identity = 27/59 (45.76%), Postives = 32/59 (54.24%), Query Frame = 1 

Query: 1   MRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYT-NYEPEGWKCKCGPSFYSP 59
           +R +GSSPP C  KC  CTPC+ + VP        G   T  Y PE W+CKCG   Y P
Sbjct: 103 LRGLGSSPPRCSSKCGRCTPCKPVHVPV-----PPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]
BLAST of Cp4.1LG03g14560 vs. Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.7e-07
Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 1 

Query: 5   GSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLS----MPLEYYPEAWRCKCGNKLFMP 109

[Close]
BLAST of Cp4.1LG03g14560 vs. TrEMBL
Match: A0A0A0LCQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G847610 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-27
Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 1 

Query: 1  MRKIGSSPPSCEHKCYGCTPCEAIQVPTN-NRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
          MRKIGSSPPSCEHKCYGC PCEAIQVPT  NRRSHVG+QYTNYEPEGWKCKCGPSFYSP
Sbjct: 21 MRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 79

[Close]
BLAST of Cp4.1LG03g14560 vs. TrEMBL
Match: W9QNQ3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013478 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-25
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 1 

Query: 3   KIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           KIGSSPPSCEHKCYGC+PCEAIQVPT NR SH+GIQY NYEPE WKCKCGPSFY+P
Sbjct: 73  KIGSSPPSCEHKCYGCSPCEAIQVPTTNRHSHLGIQYANYEPENWKCKCGPSFYTP 128

[Close]
BLAST of Cp4.1LG03g14560 vs. TrEMBL
Match: K7M960_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G025200 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-24
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 1 

Query: 3   KIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           KIGSSPPSCEHKCYGCTPCEAIQVP T++RRSH+G+QYTNYEPE WKCKCGPS YSP
Sbjct: 74  KIGSSPPSCEHKCYGCTPCEAIQVPSTSSRRSHLGLQYTNYEPESWKCKCGPSLYSP 130

[Close]
BLAST of Cp4.1LG03g14560 vs. TrEMBL
Match: A0A0B2RE08_GLYSO (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Glycine soja GN=glysoja_022383 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-24
Identity = 50/57 (87.72%), Postives = 54/57 (94.74%), Query Frame = 1 

Query: 3   KIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           KIGSSPPSCEHKCYGCTPCEAIQVP T++RRSH+G+QYTNYEPE WKCKCGPS YSP
Sbjct: 74  KIGSSPPSCEHKCYGCTPCEAIQVPSTSSRRSHLGLQYTNYEPESWKCKCGPSLYSP 130

[Close]
BLAST of Cp4.1LG03g14560 vs. TrEMBL
Match: A0A0L9TIG1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan1082s003300 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.5e-24
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 1 

Query: 3   KIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           KIGSSPPSCEHKCYGC PCEAIQVP T+ RRSH+GIQY NYEPE WKCKCGPSFYSP
Sbjct: 98  KIGSSPPSCEHKCYGCVPCEAIQVPSTSTRRSHLGIQYANYEPESWKCKCGPSFYSP 154

[Close]
BLAST of Cp4.1LG03g14560 vs. TAIR10
Match: AT3G13898.1 (AT3G13898.1 unknown protein)

HSP 1 Score: 85.1 bits (209), Expect = 1.5e-17
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 1 

Query: 2   RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGP 54
           R+IGS PPSCE KCYGC PCEAIQ PT +   H+   Y NY+PEGW+C C P
Sbjct: 55  RRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHCPP 106

[Close]
BLAST of Cp4.1LG03g14560 vs. TAIR10
Match: AT5G10310.1 (AT5G10310.1 unknown protein)

HSP 1 Score: 67.4 bits (163), Expect = 3.3e-12
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 1 

Query: 3   KIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSH--------------------VGIQYTNY 59
           ++GS+PPSC ++C  C PC AIQVPT   RS                     V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]
BLAST of Cp4.1LG03g14560 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related)

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-10
Identity = 27/59 (45.76%), Postives = 32/59 (54.24%), Query Frame = 1 

Query: 1   MRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYT-NYEPEGWKCKCGPSFYSP 59
           +R +GSSPP C  KC  CTPC+ + VP        G   T  Y PE W+CKCG   Y P
Sbjct: 177 LRGLGSSPPRCSSKCGRCTPCKPVHVPV-----PPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]
BLAST of Cp4.1LG03g14560 vs. TAIR10
Match: AT4G14723.1 (AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1))

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-08
Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 1 

Query: 5   GSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLS----MPLEYYPEAWRCKCGNKLFMP 109

[Close]
BLAST of Cp4.1LG03g14560 vs. NCBI nr
Match: gi|449458149|ref|XP_004146810.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-27
Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 1 

Query: 1   MRKIGSSPPSCEHKCYGCTPCEAIQVPTN-NRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           MRKIGSSPPSCEHKCYGC PCEAIQVPT  NRRSHVG+QYTNYEPEGWKCKCGPSFYSP
Sbjct: 58  MRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 116

[Close]
BLAST of Cp4.1LG03g14560 vs. NCBI nr
Match: gi|700204667|gb|KGN59800.1| (hypothetical protein Csa_3G847610 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-27
Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 1 

Query: 1  MRKIGSSPPSCEHKCYGCTPCEAIQVPTN-NRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
          MRKIGSSPPSCEHKCYGC PCEAIQVPT  NRRSHVG+QYTNYEPEGWKCKCGPSFYSP
Sbjct: 21 MRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFYSP 79

[Close]
BLAST of Cp4.1LG03g14560 vs. NCBI nr
Match: gi|659093602|ref|XP_008447616.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo])

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-27
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 1 

Query: 1   MRKIGSSPPSCEHKCYGCTPCEAIQVPTN-NRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           MRKIGSSPPSCEHKCYGC PCEAIQVPT  NRRSH+G+QYTNYEPEGWKCKCGPSFYSP
Sbjct: 57  MRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFYSP 115

[Close]
BLAST of Cp4.1LG03g14560 vs. NCBI nr
Match: gi|1009146031|ref|XP_015890663.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Ziziphus jujuba])

HSP 1 Score: 124.4 bits (311), Expect = 6.5e-26
Identity = 50/58 (86.21%), Postives = 54/58 (93.10%), Query Frame = 1 

Query: 1   MRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           +RKIGSSPPSCE+KCYGC PCEAIQVPT +R SHVG+QY NYEPEGWKCKCGPSFYSP
Sbjct: 70  VRKIGSSPPSCENKCYGCVPCEAIQVPTTSRHSHVGVQYANYEPEGWKCKCGPSFYSP 127

[Close]
BLAST of Cp4.1LG03g14560 vs. NCBI nr
Match: gi|703066455|ref|XP_010087716.1| (hypothetical protein L484_013478 [Morus notabilis])

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-25
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 1 

Query: 3   KIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 59
           KIGSSPPSCEHKCYGC+PCEAIQVPT NR SH+GIQY NYEPE WKCKCGPSFY+P
Sbjct: 73  KIGSSPPSCEHKCYGCSPCEAIQVPTTNRHSHLGIQYANYEPENWKCKCGPSFYTP 128

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g14560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EPFL3_ARATH2.7e-1663.46EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=1... [more]
EPFL1_ARATH5.9e-1142.11EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1... [more]
EPFL6_ARATH9.4e-0945.76EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1... [more]
EPFL4_ARATH6.7e-0742.59EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1... [more]
BLAST of Cp4.1LG03g14560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCQ8_CUCSA1.4e-2793.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G847610 PE=4 SV=1[more]
W9QNQ3_9ROSA1.7e-2587.50Uncharacterized protein OS=Morus notabilis GN=L484_013478 PE=4 SV=1[more]
K7M960_SOYBN1.1e-2487.72Uncharacterized protein OS=Glycine max GN=GLYMA_15G025200 PE=4 SV=1[more]
A0A0B2RE08_GLYSO1.1e-2487.72EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Glycine soja GN=glysoja_022383 PE=... [more]
A0A0L9TIG1_PHAAN2.5e-2487.72Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan1082s003300 PE=4 SV=... [more]
BLAST of Cp4.1LG03g14560 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G13898.11.5e-1763.46 unknown protein[more]
AT5G10310.13.3e-1242.11 unknown protein[more]
AT2G30370.15.3e-1045.76 allergen-related[more]
AT4G14723.13.8e-0842.59 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:A... [more]
BLAST of Cp4.1LG03g14560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458149|ref|XP_004146810.1|2.0e-2793.22PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus][more]
gi|700204667|gb|KGN59800.1|2.0e-2793.22hypothetical protein Csa_3G847610 [Cucumis sativus][more]
gi|659093602|ref|XP_008447616.1|2.6e-2791.53PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo][more]
gi|1009146031|ref|XP_015890663.1|6.5e-2686.21PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Ziziphus jujuba][more]
gi|703066455|ref|XP_010087716.1|2.5e-2587.50hypothetical protein L484_013478 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g14560.1Cp4.1LG03g14560.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33109FAMILY NOT NAMEDcoord: 1..58
score: 1.4
NoneNo IPR availablePANTHERPTHR33109:SF14EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3coord: 1..58
score: 1.4
NoneNo IPR availablePFAMPF17181EPFcoord: 3..58
score: 4.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g14560Cucsa.340980Cucumber (Gy14) v1cgycpeB0889
Cp4.1LG03g14560CmaCh14G012500Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g14560CmaCh01G000500Cucurbita maxima (Rimu)cmacpeB493
Cp4.1LG03g14560CmoCh14G012840Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g14560Cla012592Watermelon (97103) v1cpewmB600
Cp4.1LG03g14560Csa3G847610Cucumber (Chinese Long) v2cpecuB602
Cp4.1LG03g14560MELO3C013075Melon (DHL92) v3.5.1cpemeB569
Cp4.1LG03g14560ClCG07G013920Watermelon (Charleston Gray)cpewcgB571
Cp4.1LG03g14560CSPI03G41220Wild cucumber (PI 183967)cpecpiB604
Cp4.1LG03g14560Lsi07G005940Bottle gourd (USVL1VR-Ls)cpelsiB516
Cp4.1LG03g14560MELO3C013075.2Melon (DHL92) v3.6.1cpemedB676
Cp4.1LG03g14560CsaV3_3G043680Cucumber (Chinese Long) v3cpecucB0751
Cp4.1LG03g14560Bhi01G002138Wax gourdcpewgoB0790
Cp4.1LG03g14560CsGy3G038690Cucumber (Gy14) v2cgybcpeB399
Cp4.1LG03g14560Carg04319Silver-seed gourdcarcpeB0287
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g14560Cp4.1LG02g17360Cucurbita pepo (Zucchini)cpecpeB451
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g14560Melon (DHL92) v3.6.1cpemedB680
Cp4.1LG03g14560Melon (DHL92) v3.6.1cpemedB664
Cp4.1LG03g14560Melon (DHL92) v3.6.1cpemedB688
Cp4.1LG03g14560Silver-seed gourdcarcpeB0176
Cp4.1LG03g14560Silver-seed gourdcarcpeB1430
Cp4.1LG03g14560Cucumber (Chinese Long) v3cpecucB0744
Cp4.1LG03g14560Cucumber (Chinese Long) v3cpecucB0790
Cp4.1LG03g14560Wax gourdcpewgoB0817
Cp4.1LG03g14560Cucurbita pepo (Zucchini)cpecpeB128
Cp4.1LG03g14560Cucurbita pepo (Zucchini)cpecpeB182
Cp4.1LG03g14560Cucurbita pepo (Zucchini)cpecpeB334
Cp4.1LG03g14560Cucurbita pepo (Zucchini)cpecpeB481
Cp4.1LG03g14560Cucumber (Gy14) v1cgycpeB0942
Cp4.1LG03g14560Cucurbita maxima (Rimu)cmacpeB400
Cp4.1LG03g14560Cucurbita maxima (Rimu)cmacpeB929
Cp4.1LG03g14560Cucurbita moschata (Rifu)cmocpeB362
Cp4.1LG03g14560Cucurbita moschata (Rifu)cmocpeB452
Cp4.1LG03g14560Cucurbita moschata (Rifu)cmocpeB863
Cp4.1LG03g14560Wild cucumber (PI 183967)cpecpiB636
Cp4.1LG03g14560Cucumber (Chinese Long) v2cpecuB632
Cp4.1LG03g14560Bottle gourd (USVL1VR-Ls)cpelsiB493
Cp4.1LG03g14560Watermelon (Charleston Gray)cpewcgB542
Cp4.1LG03g14560Watermelon (97103) v1cpewmB593
Cp4.1LG03g14560Melon (DHL92) v3.5.1cpemeB558
Cp4.1LG03g14560Melon (DHL92) v3.5.1cpemeB573
Cp4.1LG03g14560Cucumber (Gy14) v2cgybcpeB230
Cp4.1LG03g14560Cucumber (Gy14) v2cgybcpeB958