Cp4.1LG03g08220 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g08220
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDof zinc finger protein
LocationCp4.1LG03 : 2973260 .. 2975181 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACGTCGTCGTTTCAGTCGTTAGATTCATTTTCCATTTTATCACTTATTTTAAATTGACACTATCATATATTATATTATATTATTACCAAAAAGAAACATCAATTTAAAATTTAAATTATTTATATTGTCGGTAGGATGAATAGATTTCGTGTTGGAAAACCGAAATAGTAATAAAATATTTATTTAATAATAATAATATTTATTAATTAATTAAAATGGAAAAAAAGGGAAAAAGTGGAGTTCTCCTAGTCGGATGTAAAATTTATCCACGCTGTCACTTCACACGTGTCGGATCTCTCTCTCTCTCTCTCTTTCTTTGATTTTGATTTACAAATGAAGAAAATAAAATAGCAAAAATAGGAAAAAAAAAAAACAAAACAGGGCAGAAATGTCGGAGCCTAAAGATCCGGCGATCAAGCTCTTCGGGAAGACGATTCCTCTGCCGGAAGCTTCTCCTCCCAGTCCTCCGCCGCCGTCTTCCTTACCCGGTAACCATACCACCGCCTCTGTTAATCATGACCTCGATTCTCCTTCTTCGAGCTTCTCGCCGGAAGGCAATATCCATGGCGATGTTGAAGATCTGGAGGCCGATAAGGTCTGGATTTGCCTCAAATCGTTTTCTATTTTGTTTTTTCAGATACCCTTTTCTGGTTTGATATTGATTTTGTTGATTTTGTTGACTCGACATGTTTTTCTGTTCGGAGAAATTTAGGTTTCTTTCTTGTTTGGTTTATCCTTTGTTTGTTCTTGATTTGTGTCGTGTGAAATGATCCTTGTCTATGATATTCTTATTCTGCTATCAAGATTTTGGGTTTTGATGCTTTCGGAATTTGGGTCAAGATTATTGAGTTTGTGCTATTTGGTAATGTTGGGGTTTTATGTGTTCATGAACAGAATGAAACAAGTAACTCACAAGAGAAGACTCTGAAGAAACCCGACAAGATTCTTCCATGTCCGCGTTGTAACAGCATGGACACCAAATTCTGTTACTATAATAACTACAACGTTAATCAACCGCGACATTTTTGTAAGAATTGTCAAAGGTATTGGACGGCTGGTGGGGTGATGAGGAATGTGCCAGTGGGTGCAGGGCGTCGTAAGAACAAAAGCTCTGCTACACACCATCGTCAAATTATTGCAATGGAAGCACTTCAACAGCCTAGAATTGATGTTTGTAATGGCAATGTGATGGCATTTGGTTCAGATGCTGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATAAAACAAGACAGAATAATGAAGATGATGATGAAGTGATTCATAATTGTGAAGGCGTTTTACCTTCAATTCCATTCATCCCTGGGGCTTACACTTGGAATTATGGTTTATATCCACCAGGAATTGGTATGCCTATGTATCCAACCGCGCCAATCTGGGGCGCCTGGACACTCCCATGGGTACCACAGGCGGCATGGATGAGCCCTGTGGGTCAAAGCCATGCGCCAAATTCTCCAACATTGGGGAAACATTCAAGAGATAAGAAAGGGGGGGAGAGGTGCATTTGGATACCAAAAACGTTGAGGATTGATGACCCAGAAGAAGCAGCTAAAAGCTCCATATGGGCAACTCTTGGAATCAAGAATGAGAAGAGGGATTCAGTGGGCGAAGGGGTTTTCAAGCCCTTTCGATTCAATGACAGCGATGAACAGAATGAGAGAACCAAACCCACTTCAGTGTTGGAACTCAATCCAGCTGCATTGTCCAGATCAATCAAATTCAATGAAAATGTATATCACTGAGTTCATCAGATCCGACCAAAATGAGTTGAGTTTGAAGTTTGTCTGAATCAAAACGTACATATATATATATATAAAGTAAATGTGTATGTAAATAAAGTTCTGGAAGTTTTGGTCATATTAGTTTCCAGTTTTGATCCATTTTAT

mRNA sequence

ATGACACCTTCTCCTCCCAGTCCTCCGCCGCCGTCTTCCTTACCCGGTAACCATACCACCGCCTCTGTTAATCATGACCTCGATTCTCCTTCTTCGAGCTTCTCGCCGGAAGGCAATATCCATGGCGATGTTGAAGATCTGGAGGCCGATAAGAATGAAACAAGTAACTCACAAGAGAAGACTCTGAAGAAACCCGACAAGATTCTTCCATGTCCGCGTTGTAACAGCATGGACACCAAATTCTGTTACTATAATAACTACAACGTTAATCAACCGCGACATTTTTGTAAGAATTGTCAAAGGTATTGGACGGCTGGTGGGGTGATGAGGAATGTGCCAGTGGGTGCAGGGCGTCGTAAGAACAAAAGCTCTGCTACACACCATCGTCAAATTATTGCAATGGAAGCACTTCAACAGCCTAGAATTGATGTTTGTAATGGCAATGTGATGGCATTTGGTTCAGATGCTGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATAAAACAAGACAGAATAATGAAGATGATGATGAAGTGATTCATAATTGTGAAGGCGTTTTACCTTCAATTCCATTCATCCCTGGGGCTTACACTTGGAATTATGGTTTATATCCACCAGGAATTGGTATGCCTATGTATCCAACCGCGCCAATCTGGGGCGCCTGGACACTCCCATGGGTACCACAGGCGGCATGGATGAGCCCTGTGGGTCAAAGCCATGCGCCAAATTCTCCAACATTGGGGAAACATTCAAGAGATAAGAAAGGGGGGGAGAGGTGCATTTGGATACCAAAAACGTTGAGGATTGATGACCCAGAAGAAGCAGCTAAAAGCTCCATATGGGCAACTCTTGGAATCAAGAATGAGAAGAGGGATTCAGTGGGCGAAGGGGTTTTCAAGCCCTTTCGATTCAATGACAGCGATGAACAGAATGAGAGAACCAAACCCACTTCAGTGTTGGAACTCAATCCAGCTGCATTGTCCAGATCAATCAAATTCAATGAAAATGTATATCACTGAGTTCATCAGATCCGACCAAAATGAGTTGAGTTTGAAGTTTGTCTGAATCAAAACGTACATATATATATATATAAAGTAAATGTGTATGTAAATAAAGTTCTGGAAGTTTTGGTCATATTAGTTTCCAGTTTTGATCCATTTTAT

Coding sequence (CDS)

ATGACACCTTCTCCTCCCAGTCCTCCGCCGCCGTCTTCCTTACCCGGTAACCATACCACCGCCTCTGTTAATCATGACCTCGATTCTCCTTCTTCGAGCTTCTCGCCGGAAGGCAATATCCATGGCGATGTTGAAGATCTGGAGGCCGATAAGAATGAAACAAGTAACTCACAAGAGAAGACTCTGAAGAAACCCGACAAGATTCTTCCATGTCCGCGTTGTAACAGCATGGACACCAAATTCTGTTACTATAATAACTACAACGTTAATCAACCGCGACATTTTTGTAAGAATTGTCAAAGGTATTGGACGGCTGGTGGGGTGATGAGGAATGTGCCAGTGGGTGCAGGGCGTCGTAAGAACAAAAGCTCTGCTACACACCATCGTCAAATTATTGCAATGGAAGCACTTCAACAGCCTAGAATTGATGTTTGTAATGGCAATGTGATGGCATTTGGTTCAGATGCTGCCCCTCTTTGTGAATCAATGGCTTCCATTTTAAACATTGCTGATAAAACAAGACAGAATAATGAAGATGATGATGAAGTGATTCATAATTGTGAAGGCGTTTTACCTTCAATTCCATTCATCCCTGGGGCTTACACTTGGAATTATGGTTTATATCCACCAGGAATTGGTATGCCTATGTATCCAACCGCGCCAATCTGGGGCGCCTGGACACTCCCATGGGTACCACAGGCGGCATGGATGAGCCCTGTGGGTCAAAGCCATGCGCCAAATTCTCCAACATTGGGGAAACATTCAAGAGATAAGAAAGGGGGGGAGAGGTGCATTTGGATACCAAAAACGTTGAGGATTGATGACCCAGAAGAAGCAGCTAAAAGCTCCATATGGGCAACTCTTGGAATCAAGAATGAGAAGAGGGATTCAGTGGGCGAAGGGGTTTTCAAGCCCTTTCGATTCAATGACAGCGATGAACAGAATGAGAGAACCAAACCCACTTCAGTGTTGGAACTCAATCCAGCTGCATTGTCCAGATCAATCAAATTCAATGAAAATGTATATCACTGA

Protein sequence

MTPSPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHHRQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFNDSDEQNERTKPTSVLELNPAALSRSIKFNENVYH
Homology
[Close]
BLAST of Cp4.1LG03g08220 vs. Swiss-Prot
Match: CDF2_ARATH (Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2)

HSP 1 Score: 263.1 bits (671), Expect = 4.3e-69
Identity = 165/350 (47.14%), Postives = 195/350 (55.71%), Query Frame = 1 

Query: 54  TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVP 113
           T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 114 VGAGRRKNKSSATH---HRQIIAMEALQQ-PRIDVCN---GNVMAFGSDAAPLCESMASI 173
           VGAGRRKNKS A+H   H  I + EA+Q+  R D+ +    N++ FGSD+  LCESMAS 
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSV-LCESMASG 242

Query: 174 LNIADKT---------------------RQNNEDDDEVIHNCEGVLPSIPFIPG-----A 233
           LN+ +K+                      Q NE+   V       LP +P  PG      
Sbjct: 243 LNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTV-----SPLPKVPCFPGPPPTWP 302

Query: 234 YTWNYGLYPPGIG---MPMYPTAPIW-------GAW-TLPWVPQAAWMSPVGQSHAPNSP 293
           Y WN      G+    +P YP    W       GAW +  W+PQ    SP G +  PNSP
Sbjct: 303 YAWN------GVSWTILPFYPPPAYWSCPGVSPGAWNSFTWMPQP--NSPSGSN--PNSP 362

Query: 294 TLGKHSRD-------------------KKGGERCIWIPKTLRIDDPEEAAKSSIWATLGI 341
           TLGKHSRD                   K   ERC+W+PKTLRIDDPEEAAKSSIW TLGI
Sbjct: 363 TLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGI 422

[Close]
BLAST of Cp4.1LG03g08220 vs. Swiss-Prot
Match: CDF1_ARATH (Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2)

HSP 1 Score: 222.2 bits (565), Expect = 8.5e-57
Identity = 141/313 (45.05%), Postives = 180/313 (57.51%), Query Frame = 1 

Query: 43  DVEDLEADKNETS-----NSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCK 102
           +V D E +KN+       + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK
Sbjct: 23  EVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCK 82

Query: 103 NCQRYWTAGGVMRNVPVGAGRRKNK--SSATHHRQIIAMEALQQPRIDVCNGNVMAFG-S 162
            CQRYWT+GG MR+VP+GAGRRKNK  S  +H+  +   E          NG V++F   
Sbjct: 83  ACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET---------NGPVLSFSLG 142

Query: 163 DAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIPGAYTWNYGLYPPGIGM 222
           D   +  +      +  +   N+E  +   +N    L   P +   YTWN   Y      
Sbjct: 143 DDQKVSSNRFGNQKLVARIENNDERSN---NNTSNGLNCFPGVSWPYTWNPAFY------ 202

Query: 223 PMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRD------KKGGERCIWIP 282
           P+YP       W++P        SPV  S +P S TLGKHSRD      +K     + +P
Sbjct: 203 PVYP------YWSMP-----VLSSPV--SSSPTS-TLGKHSRDEDETVKQKQRNGSVLVP 262

Query: 283 KTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFNDSDEQNERTKPTSVLELNP 342
           KTLRIDDP EAAKSSIW TLGIKNE   + G G  K  + ++ +E    T+ + VL  NP
Sbjct: 263 KTLRIDDPNEAAKSSIWTTLGIKNEVMFN-GFGSKKEVKLSNKEE----TETSLVLCANP 298

[Close]
BLAST of Cp4.1LG03g08220 vs. Swiss-Prot
Match: CDF5_ARATH (Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.5e-42
Identity = 118/332 (35.54%), Postives = 175/332 (52.71%), Query Frame = 1 

Query: 26  DLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT-LKKPDKILPCPRCNSMDTKFCYY 85
           ++ SP SS   + N     E        T++ ++ T LKKPDK++PCPRC S +TKFCYY
Sbjct: 91  EISSPRSS---KNNCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYY 150

Query: 86  NNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS--SATHHRQIIAMEALQQPRI 145
           NNYNVNQPR+FC+NCQRYWTAGG MRNVPVG+GRRKNK   S+ H+ Q+ + +       
Sbjct: 151 NNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSEDCDNNN-- 210

Query: 146 DVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIP-GAY 205
              +G +++FGS  + + E+        D  + + +   +   + +G LP    +P  + 
Sbjct: 211 ---SGTILSFGSSESSVTETGKH--QSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSS 270

Query: 206 TWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDKKGG 265
            W Y   P G     YP    WG  T+P  P            +  S  LGK SRD+  G
Sbjct: 271 PWPYQWSPTGPNASFYPVPFYWGC-TVPIYPT-----------SETSSCLGKRSRDQTEG 330

Query: 266 E-----------RCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFND 325
                       R   + ++LR++   EA+KS++W+ L  K EK+ + G  +F  F    
Sbjct: 331 RINDTNTTITTTRARLVSESLRMN--IEASKSAVWSKLPTKPEKK-TQGFSLFNGFDTKG 390

Query: 326 SDEQNERTKPTS-VLELNPAALSRSIKFNENV 342
           +  ++     TS  L+ NPAA+SR++ F E++
Sbjct: 391 NSNRSSLVSETSHSLQANPAAMSRAMNFRESM 397

[Close]
BLAST of Cp4.1LG03g08220 vs. Swiss-Prot
Match: CDF3_ARATH (Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-35
Identity = 83/180 (46.11%), Postives = 109/180 (60.56%), Query Frame = 1 

Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEA-DKNETSNSQEKTL 63
           SP    P  S   N+     + +   P +    E      +E  +  + N+ +    KTL
Sbjct: 44  SPEKVTPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTL 103

Query: 64  KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNK 123
           KKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAGG MRNVPVGAGRRKNK
Sbjct: 104 KKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 163

Query: 124 SSATHHRQIIAMEALQQPRID---VCNGNVMAFGSDAAP--LCESMASILNIADKTRQNN 178
           SS++H+R I   EAL+  R+D     N  V++FG +A    +   M  ++ + +  + +N
Sbjct: 164 SSSSHYRHITISEALEAARLDPGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSN 223

[Close]
BLAST of Cp4.1LG03g08220 vs. Swiss-Prot
Match: DOF13_ARATH (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.5e-34
Identity = 117/349 (33.52%), Postives = 172/349 (49.28%), Query Frame = 1 

Query: 11  PSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT--LKKPDKI 70
           P  +     T + +  L S  ++ S E + + D  D  ++    ++ +EKT  LKKPDKI
Sbjct: 47  PHMMNNQSVTDNTSLKLSSNLNNESKETSENSD--DQHSEITTITSEEEKTTELKKPDKI 106

Query: 71  LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHH 130
           LPCPRCNS DTKFCYYNNYNVNQPRHFC+ CQRYWTAGG MR VPVG+GRRKNK   +  
Sbjct: 107 LPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSD 166

Query: 131 RQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCE 190
            Q + + +      +  +  +++F S  + + E      + +++ + N E   +  +N +
Sbjct: 167 -QYLHITSEDTDNYNSSSTKILSFESSDSLVTERPK---HQSNEVKINAEPVSQEPNNFQ 226

Query: 191 GVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNS 250
           G+LP     P +  W Y  YPP    P +   P++    +P      W      S    S
Sbjct: 227 GLLPP-QASPVSPPWPY-QYPPN---PSFYHMPVYWGCAIP-----VW------STLDTS 286

Query: 251 PTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKP--- 310
             LGK +RD+   E       T++         S +  +  IKNE   +    V+ P   
Sbjct: 287 TCLGKRTRDETSHE-------TVKESKNAFERTSLLLESQSIKNETSMATNNHVWYPVPM 346

Query: 311 -------FRF----NDSDEQNERTKPTSVLEL--NPAALSRSIKFNENV 342
                  F F     ++   N R  P + L L  NPAA++RS+ F E++
Sbjct: 347 TREKTQEFSFFSNGAETKSSNNRFVPETYLNLQANPAAMARSMNFRESI 366

[Close]
BLAST of Cp4.1LG03g08220 vs. TrEMBL
Match: A0A0D3L704_9ROSI (Dof zinc finger protein DOF5 OS=Juglans regia PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.0e-88
Identity = 204/427 (47.78%), Postives = 246/427 (57.61%), Query Frame = 1 

Query: 8   PPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDL-----EADKNETSNSQEKTL 67
           P PP S     + A  N D  S  S  S   ++  +   L     E + +E++NSQEK L
Sbjct: 87  PGPPVS-----SEALTNPDATSGISENSKTPSVEKESATLKNSKPEEEHSESNNSQEKPL 146

Query: 68  KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNK 127
           KKPDKILPCPRC SMDTKFCY+NNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKNK
Sbjct: 147 KKPDKILPCPRCTSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 206

Query: 128 SSATHHRQIIAMEALQQPRIDV----------CNGNVMAFGSDAAPLCESMASILNIADK 187
           +SA+H+R I   EALQ    D+           NG V+ FGSD +PLCESMAS+LN+ADK
Sbjct: 207 NSASHYRHITVSEALQNAGTDLTNGVHHPSLKSNGTVLTFGSD-SPLCESMASVLNLADK 266

Query: 188 TRQN----------------------NEDD----------------------DEVIHNCE 247
           T +N                      N DD                      + V+ NC+
Sbjct: 267 TMRNCTQNGFQIPEELRIPVSYGGGENGDDCSNGASVVTSNSKDDPGKTGSQERVMSNCQ 326

Query: 248 GVLPSIPFIPGA---YTWNY----------GLYPPGIGMPMYPTAPIW-----GAWTLPW 307
           G  P IP  PGA   Y WN              PPG  MP YP A  W     GAW++PW
Sbjct: 327 GFPPQIPCFPGAPWPYPWNSTQWSSPIPPPAFCPPGFPMPFYPAAAYWGCTVPGAWSMPW 386

Query: 308 VPQAAWMSPVGQSHAPNSPTLGKHSRD----------------KKGGERCIWIPKTLRID 341
           +PQ    +P   +  PNSPTLGKHSRD                +   ERC+WIPKTLRID
Sbjct: 387 LPQPTSPTP---NSGPNSPTLGKHSRDENVLKSSNSGEGEPLKENNTERCLWIPKTLRID 446

[Close]
BLAST of Cp4.1LG03g08220 vs. TrEMBL
Match: A0A103YHE2_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_012516 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 3.8e-88
Identity = 194/380 (51.05%), Postives = 231/380 (60.79%), Query Frame = 1 

Query: 18  HTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLKKPDKILPCPRCNSM 77
           + T+ +N +  +PS+     G        LE +++E SN+QEKTLKKPDKILPCPRCNSM
Sbjct: 135 NATSMLNENSKTPSAENESAGA--AKASKLEEEQSEMSNNQEKTLKKPDKILPCPRCNSM 194

Query: 78  DTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHHRQIIAMEAL 137
           DTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKNK+SA+ +RQI   EAL
Sbjct: 195 DTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKTSASQYRQITVTEAL 254

Query: 138 Q---QPRIDVCNGNVMAFGSDAAPLCESMASILNIADKT-RQN------------NEDDD 197
                  +   NG V+ FGSD  PLCESMAS+L IADKT RQ+            N+D+ 
Sbjct: 255 PTELNHTVLKPNGTVLTFGSD-TPLCESMASVLKIADKTLRQDSFRKAEELIVPVNDDNG 314

Query: 198 E-----VIHNCEGVLPSIPFIPGA---YTWN----YGLYPPGIGMPMYPTAPIW------ 257
                  + NC G  P +P  PGA   Y WN        PPG  MP YP AP W      
Sbjct: 315 SRSSTAEMQNCHGFSPQVPCFPGAPWPYPWNPQMGPAFCPPGFPMPFYPAAPYWGCAVPV 374

Query: 258 ---GAWTLPWVPQAAWMSPVGQS-------HAPNSPTLGKHSRDKK------------GG 317
              G+W + WVP  +   P   S         P SPTLGKHSRD+K             G
Sbjct: 375 PGPGSWNMQWVPPPSGYHPAPPSTYAAPPPSGPISPTLGKHSRDEKMVRSGDEASKENEG 434

Query: 318 ERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSV-GEGVFKPFRFNDSDEQNERTKP 341
           E+ +WIPKTLRIDDP+EAAKSSIWATLGIKNE+   V G G+FK F+    + +    + 
Sbjct: 435 EKSLWIPKTLRIDDPDEAAKSSIWATLGIKNERCVGVNGGGMFKAFQSKGGEVKKPLKEA 494

[Close]
BLAST of Cp4.1LG03g08220 vs. TrEMBL
Match: A0A0U2T0P5_CAMSI (DNA binding with one finger 1 (Fragment) OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.5e-88
Identity = 188/348 (54.02%), Postives = 224/348 (64.37%), Query Frame = 1 

Query: 48  EADKNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG 107
           E +++ETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG
Sbjct: 117 EEEQSETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG 176

Query: 108 VMRNVPVGAGRRKNKSSATHHRQIIAMEALQQPRIDV----------CNGNVMAFGSDAA 167
            MRNVPVGAGRRKNK+SA+H+R I   EALQ  R D+           NG V+ FGS   
Sbjct: 177 TMRNVPVGAGRRKNKNSASHYRHIAVSEALQNARADLPNGIHHSTLKPNGTVLTFGSSDT 236

Query: 168 PLC-ESMASILNIADKTRQNNEDD--------DEVIHNCEGVLPSIPFIPGA---YTWNY 227
           PLC E+     + +  T  N++DD        D V+ NC G  P +P  PG    Y WN 
Sbjct: 237 PLCGENGDDHSSGSSVTAANSKDDVGSKTGLQDPVMQNCHGFPPQVPCFPGTPWPYPWNS 296

Query: 228 GLY----------PPGIGMPMYPTAPIW-----GAWTLPWV-PQAAWMSPVGQSHAPNSP 287
             +          PPG  MP YP  P W     G W +PWV P ++  + +  S  PNSP
Sbjct: 297 AQWSGPVPVPAFCPPGFPMPFYP-PPYWGCTIPGTWNVPWVTPPSSSPNHIAPSSGPNSP 356

Query: 288 TLGKHSRDK------KGG----------ERCIWIPKTLRIDDPEEAAKSSIWATLGIKNE 341
           TLGKHSRD+      K G          ER +WIPKTLRIDDP EAAKSSIWATLGIKN+
Sbjct: 357 TLGKHSRDENMLKQTKSGEEDPQRENNPERSLWIPKTLRIDDPGEAAKSSIWATLGIKND 416

[Close]
BLAST of Cp4.1LG03g08220 vs. TrEMBL
Match: A0A142IXD4_CHRMO (DOF transcription factor 1 (Fragment) OS=Chrysanthemum morifolium PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 1.5e-84
Identity = 194/384 (50.52%), Postives = 224/384 (58.33%), Query Frame = 1 

Query: 8   PPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLKKPDK 67
           P   S+L  N TTAS   +  +  +S S E               E S  Q+KTLKKPDK
Sbjct: 86  PNTTSTLNENPTTASAETESANAKASKSQE---------------EQSEQQDKTLKKPDK 145

Query: 68  ILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATH 127
           ILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKNK+SA+ 
Sbjct: 146 ILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKTSASQ 205

Query: 128 HRQIIAMEALQQP---RIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNE------ 187
           +RQI   EA+       +   NG V+ FGSD  PLCESMAS+LNIADKT++ +       
Sbjct: 206 YRQITVTEAIPSELGHTVLKPNGTVLTFGSDT-PLCESMASVLNIADKTKRQDSFRKPEE 265

Query: 188 --------DDDEV-------IHNCEGVLPSIPFIPGAYTWNY--------GLYPPGIGMP 247
                    DD         + NC G  P +P  P    W Y           PPG  MP
Sbjct: 266 LIIPVPSSSDDNTNRPSVTEMQNCHGFSPQMPCFPPGAPWPYPWSPQMGPAFCPPGYPMP 325

Query: 248 MYPTAPIW---------GAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDKKGGE---- 307
            YP  P W         G W++ WVP  A   P   S  P SPTLGKHSR + G E    
Sbjct: 326 FYPVPPYWVLPGPGPGPGPWSMQWVPPPANYHPA-PSTGPISPTLGKHSRAENGDEDLTK 385

Query: 308 -----RCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSV-GEGVFKPFRFNDSDEQNE 340
                + +W+PKTLRIDDPEEAAKSSIWATLGIKN++   V G G+FK F+ + SDE+N 
Sbjct: 386 ESEPEKSLWVPKTLRIDDPEEAAKSSIWATLGIKNDRSVGVNGSGIFKAFQ-SKSDEKNT 445

[Close]
BLAST of Cp4.1LG03g08220 vs. TrEMBL
Match: B9H0C1_POPTR (Ascorbate oxidase promoter-binding family protein OS=Populus trichocarpa GN=POPTR_0004s12120g PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 7.6e-81
Identity = 193/430 (44.88%), Postives = 231/430 (53.72%), Query Frame = 1 

Query: 2   TPSPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT 61
           T  P +P   S    N  T S+  + +   +S + E            + ++TSNS EKT
Sbjct: 87  TEEPSNPDATSGTSENPKTPSIEKESEGLQTSRTEE------------EDSDTSNSPEKT 146

Query: 62  LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKN 121
           LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKN
Sbjct: 147 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 206

Query: 122 KSSATHHRQIIAMEALQQPRIDV----------CNGNVMAFGSDAAPLCE---SMASIL- 181
           K+SA+H+R I   EALQ  R DV           NG V+ FGSD  PL E   S+ ++  
Sbjct: 207 KNSASHYRHITIPEALQNVRADVPNGVYHPSMKTNGTVLTFGSDT-PLHESMASVLNLAD 266

Query: 182 ---------------------------------NIADKTRQNNEDD-------DEVIHNC 241
                                            N +  T  N+ D+       +  + NC
Sbjct: 267 KTTRNCTRNGSHKPDAVRIPVSYGSGENGDDHSNGSSVTVSNSIDEAGKSMSKESAMQNC 326

Query: 242 EGVLPSIPFIPGA---YTWNYGLY----------PPGIGMPMYPTAPIWG-----AWTLP 301
           +G  P IP  PG    Y WN   +          PPG  MP YP A  WG     AW +P
Sbjct: 327 QGFPPEIPCFPGVPWPYPWNSAQWSSPLPPPAFCPPGFPMPFYPAAAYWGCTVPGAWNIP 386

Query: 302 WVPQAAWMSPVGQSHAPNSPTLGKHSRDKK----------------GGERCIWIPKTLRI 343
           W+PQ +       S  PNSPTLGKHSRD+                   ERC+WIPKTLRI
Sbjct: 387 WLPQPSSPKQTSSSSGPNSPTLGKHSRDENMLKSSNSEEGESAKENNTERCLWIPKTLRI 446

[Close]
BLAST of Cp4.1LG03g08220 vs. TAIR10
Match: AT5G39660.1 (AT5G39660.1 cycling DOF factor 2)

HSP 1 Score: 263.1 bits (671), Expect = 2.4e-70
Identity = 165/350 (47.14%), Postives = 195/350 (55.71%), Query Frame = 1 

Query: 54  TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVP 113
           T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 114 VGAGRRKNKSSATH---HRQIIAMEALQQ-PRIDVCN---GNVMAFGSDAAPLCESMASI 173
           VGAGRRKNKS A+H   H  I + EA+Q+  R D+ +    N++ FGSD+  LCESMAS 
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQHPNGANLLTFGSDSV-LCESMASG 242

Query: 174 LNIADKT---------------------RQNNEDDDEVIHNCEGVLPSIPFIPG-----A 233
           LN+ +K+                      Q NE+   V       LP +P  PG      
Sbjct: 243 LNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTV-----SPLPKVPCFPGPPPTWP 302

Query: 234 YTWNYGLYPPGIG---MPMYPTAPIW-------GAW-TLPWVPQAAWMSPVGQSHAPNSP 293
           Y WN      G+    +P YP    W       GAW +  W+PQ    SP G +  PNSP
Sbjct: 303 YAWN------GVSWTILPFYPPPAYWSCPGVSPGAWNSFTWMPQP--NSPSGSN--PNSP 362

Query: 294 TLGKHSRD-------------------KKGGERCIWIPKTLRIDDPEEAAKSSIWATLGI 341
           TLGKHSRD                   K   ERC+W+PKTLRIDDPEEAAKSSIW TLGI
Sbjct: 363 TLGKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGI 422

[Close]
BLAST of Cp4.1LG03g08220 vs. TAIR10
Match: AT5G62430.1 (AT5G62430.1 cycling DOF factor 1)

HSP 1 Score: 222.2 bits (565), Expect = 4.8e-58
Identity = 141/313 (45.05%), Postives = 180/313 (57.51%), Query Frame = 1 

Query: 43  DVEDLEADKNETS-----NSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCK 102
           +V D E +KN+       + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK
Sbjct: 23  EVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCK 82

Query: 103 NCQRYWTAGGVMRNVPVGAGRRKNK--SSATHHRQIIAMEALQQPRIDVCNGNVMAFG-S 162
            CQRYWT+GG MR+VP+GAGRRKNK  S  +H+  +   E          NG V++F   
Sbjct: 83  ACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISET---------NGPVLSFSLG 142

Query: 163 DAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIPGAYTWNYGLYPPGIGM 222
           D   +  +      +  +   N+E  +   +N    L   P +   YTWN   Y      
Sbjct: 143 DDQKVSSNRFGNQKLVARIENNDERSN---NNTSNGLNCFPGVSWPYTWNPAFY------ 202

Query: 223 PMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRD------KKGGERCIWIP 282
           P+YP       W++P        SPV  S +P S TLGKHSRD      +K     + +P
Sbjct: 203 PVYP------YWSMP-----VLSSPV--SSSPTS-TLGKHSRDEDETVKQKQRNGSVLVP 262

Query: 283 KTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFNDSDEQNERTKPTSVLELNP 342
           KTLRIDDP EAAKSSIW TLGIKNE   + G G  K  + ++ +E    T+ + VL  NP
Sbjct: 263 KTLRIDDPNEAAKSSIWTTLGIKNEVMFN-GFGSKKEVKLSNKEE----TETSLVLCANP 298

[Close]
BLAST of Cp4.1LG03g08220 vs. TAIR10
Match: AT1G69570.1 (AT1G69570.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 174.9 bits (442), Expect = 8.7e-44
Identity = 118/332 (35.54%), Postives = 175/332 (52.71%), Query Frame = 1 

Query: 26  DLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT-LKKPDKILPCPRCNSMDTKFCYY 85
           ++ SP SS   + N     E        T++ ++ T LKKPDK++PCPRC S +TKFCYY
Sbjct: 91  EISSPRSS---KNNCDQQSEITTTTTTSTTSGEKSTALKKPDKLIPCPRCESANTKFCYY 150

Query: 86  NNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKS--SATHHRQIIAMEALQQPRI 145
           NNYNVNQPR+FC+NCQRYWTAGG MRNVPVG+GRRKNK   S+ H+ Q+ + +       
Sbjct: 151 NNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNKGWPSSNHYLQVTSEDCDNNN-- 210

Query: 146 DVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCEGVLPSIPFIP-GAY 205
              +G +++FGS  + + E+        D  + + +   +   + +G LP    +P  + 
Sbjct: 211 ---SGTILSFGSSESSVTETGKH--QSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSS 270

Query: 206 TWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDKKGG 265
            W Y   P G     YP    WG  T+P  P            +  S  LGK SRD+  G
Sbjct: 271 PWPYQWSPTGPNASFYPVPFYWGC-TVPIYPT-----------SETSSCLGKRSRDQTEG 330

Query: 266 E-----------RCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKPFRFND 325
                       R   + ++LR++   EA+KS++W+ L  K EK+ + G  +F  F    
Sbjct: 331 RINDTNTTITTTRARLVSESLRMN--IEASKSAVWSKLPTKPEKK-TQGFSLFNGFDTKG 390

Query: 326 SDEQNERTKPTS-VLELNPAALSRSIKFNENV 342
           +  ++     TS  L+ NPAA+SR++ F E++
Sbjct: 391 NSNRSSLVSETSHSLQANPAAMSRAMNFRESM 397

[Close]
BLAST of Cp4.1LG03g08220 vs. TAIR10
Match: AT3G47500.1 (AT3G47500.1 cycling DOF factor 3)

HSP 1 Score: 151.8 bits (382), Expect = 7.9e-37
Identity = 83/180 (46.11%), Postives = 109/180 (60.56%), Query Frame = 1 

Query: 4   SPPSPPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEA-DKNETSNSQEKTL 63
           SP    P  S   N+     + +   P +    E      +E  +  + N+ +    KTL
Sbjct: 44  SPEKVTPELSDKNNNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTL 103

Query: 64  KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNK 123
           KKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAGG MRNVPVGAGRRKNK
Sbjct: 104 KKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNK 163

Query: 124 SSATHHRQIIAMEALQQPRID---VCNGNVMAFGSDAAP--LCESMASILNIADKTRQNN 178
           SS++H+R I   EAL+  R+D     N  V++FG +A    +   M  ++ + +  + +N
Sbjct: 164 SSSSHYRHITISEALEAARLDPGLQANTRVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSN 223

[Close]
BLAST of Cp4.1LG03g08220 vs. TAIR10
Match: AT1G26790.1 (AT1G26790.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.5e-35
Identity = 117/349 (33.52%), Postives = 172/349 (49.28%), Query Frame = 1 

Query: 11  PSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKT--LKKPDKI 70
           P  +     T + +  L S  ++ S E + + D  D  ++    ++ +EKT  LKKPDKI
Sbjct: 77  PHMMNNQSVTDNTSLKLSSNLNNESKETSENSD--DQHSEITTITSEEEKTTELKKPDKI 136

Query: 71  LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHH 130
           LPCPRCNS DTKFCYYNNYNVNQPRHFC+ CQRYWTAGG MR VPVG+GRRKNK   +  
Sbjct: 137 LPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSD 196

Query: 131 RQIIAMEALQQPRIDVCNGNVMAFGSDAAPLCESMASILNIADKTRQNNEDDDEVIHNCE 190
            Q + + +      +  +  +++F S  + + E      + +++ + N E   +  +N +
Sbjct: 197 -QYLHITSEDTDNYNSSSTKILSFESSDSLVTERPK---HQSNEVKINAEPVSQEPNNFQ 256

Query: 191 GVLPSIPFIPGAYTWNYGLYPPGIGMPMYPTAPIWGAWTLPWVPQAAWMSPVGQSHAPNS 250
           G+LP     P +  W Y  YPP    P +   P++    +P      W      S    S
Sbjct: 257 GLLPP-QASPVSPPWPY-QYPPN---PSFYHMPVYWGCAIP-----VW------STLDTS 316

Query: 251 PTLGKHSRDKKGGERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSVGEGVFKP--- 310
             LGK +RD+   E       T++         S +  +  IKNE   +    V+ P   
Sbjct: 317 TCLGKRTRDETSHE-------TVKESKNAFERTSLLLESQSIKNETSMATNNHVWYPVPM 376

Query: 311 -------FRF----NDSDEQNERTKPTSVLEL--NPAALSRSIKFNENV 342
                  F F     ++   N R  P + L L  NPAA++RS+ F E++
Sbjct: 377 TREKTQEFSFFSNGAETKSSNNRFVPETYLNLQANPAAMARSMNFRESI 396

[Close]
BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: gi|659085400|ref|XP_008443398.1| (PREDICTED: cyclic dof factor 2 [Cucumis melo])

HSP 1 Score: 415.2 bits (1066), Expect = 1.1e-112
Identity = 226/378 (59.79%), Postives = 251/378 (66.40%), Query Frame = 1 

Query: 50  DKNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVM 109
           ++NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG M
Sbjct: 137 EQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTM 196

Query: 110 RNVPVGAGRRKNKSSATHHRQIIAMEALQQPRIDV----------CNGNVMAFGSDAAPL 169
           RNVPVGAGRRKNKSSA+HHRQII  EALQ  R DV           NGNV+AFGSD APL
Sbjct: 197 RNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNGNVLAFGSD-APL 256

Query: 170 CESMASILNIADKTRQN----------------------NED------------------ 229
           CESMASILNIADKTRQN                      N+D                  
Sbjct: 257 CESMASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQESAPTPFINNEEGKT 316

Query: 230 --DDEVIHNCEGVL-PSIPFIPGA---YTWNY----------GLYPPGIGMPMYPTAPIW 289
              D+VIHNC+G L P +PF PG    Y WN             YPPGI MP YPTAP W
Sbjct: 317 GPQDQVIHNCQGFLPPHVPFFPGTPWPYPWNSPQWSSPVPPPTFYPPGIPMPFYPTAPFW 376

Query: 290 -----GAWTLPWVPQAAWMSPVGQSHAPNSPTLGKHSRDK----------------KGGE 341
                GAW +PWV Q   +SPV Q+HAPNSPTLGKHSRD+                   E
Sbjct: 377 GCTVPGAWPIPWVSQPPPLSPVAQNHAPNSPTLGKHSRDENVTKQSDFGEHEQQKDNKTE 436

[Close]
BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: gi|586637171|gb|AHJ79154.1| (dof zinc finger protein DOF5 [Juglans regia])

HSP 1 Score: 335.1 bits (858), Expect = 1.4e-88
Identity = 204/427 (47.78%), Postives = 246/427 (57.61%), Query Frame = 1 

Query: 8   PPPPSSLPGNHTTASVNHDLDSPSSSFSPEGNIHGDVEDL-----EADKNETSNSQEKTL 67
           P PP S     + A  N D  S  S  S   ++  +   L     E + +E++NSQEK L
Sbjct: 87  PGPPVS-----SEALTNPDATSGISENSKTPSVEKESATLKNSKPEEEHSESNNSQEKPL 146

Query: 68  KKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNK 127
           KKPDKILPCPRC SMDTKFCY+NNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKNK
Sbjct: 147 KKPDKILPCPRCTSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNK 206

Query: 128 SSATHHRQIIAMEALQQPRIDV----------CNGNVMAFGSDAAPLCESMASILNIADK 187
           +SA+H+R I   EALQ    D+           NG V+ FGSD +PLCESMAS+LN+ADK
Sbjct: 207 NSASHYRHITVSEALQNAGTDLTNGVHHPSLKSNGTVLTFGSD-SPLCESMASVLNLADK 266

Query: 188 TRQN----------------------NEDD----------------------DEVIHNCE 247
           T +N                      N DD                      + V+ NC+
Sbjct: 267 TMRNCTQNGFQIPEELRIPVSYGGGENGDDCSNGASVVTSNSKDDPGKTGSQERVMSNCQ 326

Query: 248 GVLPSIPFIPGA---YTWNY----------GLYPPGIGMPMYPTAPIW-----GAWTLPW 307
           G  P IP  PGA   Y WN              PPG  MP YP A  W     GAW++PW
Sbjct: 327 GFPPQIPCFPGAPWPYPWNSTQWSSPIPPPAFCPPGFPMPFYPAAAYWGCTVPGAWSMPW 386

Query: 308 VPQAAWMSPVGQSHAPNSPTLGKHSRD----------------KKGGERCIWIPKTLRID 341
           +PQ    +P   +  PNSPTLGKHSRD                +   ERC+WIPKTLRID
Sbjct: 387 LPQPTSPTP---NSGPNSPTLGKHSRDENVLKSSNSGEGEPLKENNTERCLWIPKTLRID 446

[Close]
BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: gi|976925245|gb|KVI09156.1| (hypothetical protein Ccrd_012516, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 333.2 bits (853), Expect = 5.4e-88
Identity = 194/380 (51.05%), Postives = 231/380 (60.79%), Query Frame = 1 

Query: 18  HTTASVNHDLDSPSSSFSPEGNIHGDVEDLEADKNETSNSQEKTLKKPDKILPCPRCNSM 77
           + T+ +N +  +PS+     G        LE +++E SN+QEKTLKKPDKILPCPRCNSM
Sbjct: 135 NATSMLNENSKTPSAENESAGA--AKASKLEEEQSEMSNNQEKTLKKPDKILPCPRCNSM 194

Query: 78  DTKFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHHRQIIAMEAL 137
           DTKFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKNK+SA+ +RQI   EAL
Sbjct: 195 DTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKTSASQYRQITVTEAL 254

Query: 138 Q---QPRIDVCNGNVMAFGSDAAPLCESMASILNIADKT-RQN------------NEDDD 197
                  +   NG V+ FGSD  PLCESMAS+L IADKT RQ+            N+D+ 
Sbjct: 255 PTELNHTVLKPNGTVLTFGSD-TPLCESMASVLKIADKTLRQDSFRKAEELIVPVNDDNG 314

Query: 198 E-----VIHNCEGVLPSIPFIPGA---YTWN----YGLYPPGIGMPMYPTAPIW------ 257
                  + NC G  P +P  PGA   Y WN        PPG  MP YP AP W      
Sbjct: 315 SRSSTAEMQNCHGFSPQVPCFPGAPWPYPWNPQMGPAFCPPGFPMPFYPAAPYWGCAVPV 374

Query: 258 ---GAWTLPWVPQAAWMSPVGQS-------HAPNSPTLGKHSRDKK------------GG 317
              G+W + WVP  +   P   S         P SPTLGKHSRD+K             G
Sbjct: 375 PGPGSWNMQWVPPPSGYHPAPPSTYAAPPPSGPISPTLGKHSRDEKMVRSGDEASKENEG 434

Query: 318 ERCIWIPKTLRIDDPEEAAKSSIWATLGIKNEKRDSV-GEGVFKPFRFNDSDEQNERTKP 341
           E+ +WIPKTLRIDDP+EAAKSSIWATLGIKNE+   V G G+FK F+    + +    + 
Sbjct: 435 EKSLWIPKTLRIDDPDEAAKSSIWATLGIKNERCVGVNGGGMFKAFQSKGGEVKKPLKEA 494

[Close]
BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: gi|960516256|gb|ALR87188.1| (DNA binding with one finger 1, partial [Camellia sinensis])

HSP 1 Score: 332.4 bits (851), Expect = 9.3e-88
Identity = 188/348 (54.02%), Postives = 224/348 (64.37%), Query Frame = 1 

Query: 48  EADKNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG 107
           E +++ETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG
Sbjct: 117 EEEQSETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG 176

Query: 108 VMRNVPVGAGRRKNKSSATHHRQIIAMEALQQPRIDV----------CNGNVMAFGSDAA 167
            MRNVPVGAGRRKNK+SA+H+R I   EALQ  R D+           NG V+ FGS   
Sbjct: 177 TMRNVPVGAGRRKNKNSASHYRHIAVSEALQNARADLPNGIHHSTLKPNGTVLTFGSSDT 236

Query: 168 PLC-ESMASILNIADKTRQNNEDD--------DEVIHNCEGVLPSIPFIPGA---YTWNY 227
           PLC E+     + +  T  N++DD        D V+ NC G  P +P  PG    Y WN 
Sbjct: 237 PLCGENGDDHSSGSSVTAANSKDDVGSKTGLQDPVMQNCHGFPPQVPCFPGTPWPYPWNS 296

Query: 228 GLY----------PPGIGMPMYPTAPIW-----GAWTLPWV-PQAAWMSPVGQSHAPNSP 287
             +          PPG  MP YP  P W     G W +PWV P ++  + +  S  PNSP
Sbjct: 297 AQWSGPVPVPAFCPPGFPMPFYP-PPYWGCTIPGTWNVPWVTPPSSSPNHIAPSSGPNSP 356

Query: 288 TLGKHSRDK------KGG----------ERCIWIPKTLRIDDPEEAAKSSIWATLGIKNE 341
           TLGKHSRD+      K G          ER +WIPKTLRIDDP EAAKSSIWATLGIKN+
Sbjct: 357 TLGKHSRDENMLKQTKSGEEDPQRENNPERSLWIPKTLRIDDPGEAAKSSIWATLGIKND 416

[Close]
BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match: gi|743929474|ref|XP_011008971.1| (PREDICTED: cyclic dof factor 3-like [Populus euphratica])

HSP 1 Score: 327.8 bits (839), Expect = 2.3e-86
Identity = 195/412 (47.33%), Postives = 232/412 (56.31%), Query Frame = 1 

Query: 24  NHDLDSPSSSFSPEGNIHGDVEDLEA----DKNETSNSQEKTLKKPDKILPCPRCNSMDT 83
           N D +S +S      +I  + E L+     + ++TSNSQEKTLKKPDKILPCPRC SMDT
Sbjct: 92  NPDANSRTSENPKTPSIEKESEGLQTLRTEEHSDTSNSQEKTLKKPDKILPCPRCKSMDT 151

Query: 84  KFCYYNNYNVNQPRHFCKNCQRYWTAGGVMRNVPVGAGRRKNKSSATHHRQIIAMEALQQ 143
           KFCYYNNYNVNQPRHFCKNCQRYWTAGG MRNVPVGAGRRKNK+SA+H+R I   EALQ 
Sbjct: 152 KFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITIPEALQN 211

Query: 144 PRIDV----------CNGNVMAFGSDAAPLCESMASILNI-------------------- 203
            R DV           NG V+ FGSD  PL ESMAS+LN+                    
Sbjct: 212 VRADVPNGVYHPSMKTNGTVLTFGSDT-PLHESMASVLNLADKTTRNCTRNVSHKPDAVR 271

Query: 204 -----------------ADKTRQNNEDD-------DEVIHNCEGVLPSIPFIPGA---YT 263
                            +  T  N+ D+       +  + NC+G  P IP  PG    Y 
Sbjct: 272 IPVSYGSGENGDDHSNGSSVTVSNSIDEAGKSMSKESAMQNCQGFTPEIPCFPGVPWPYP 331

Query: 264 WNYGLY----------PPGIGMPMYPTAPIWG-----AWTLPWVPQAAWMSPVGQSHAPN 323
           WN   +          PPG  MP YP A  WG     AW +PW+PQ++       S +PN
Sbjct: 332 WNSAQWSSPLPPPAFCPPGFPMPFYPAAAYWGCTVPGAWNIPWLPQSSSPKQASLSSSPN 391

Query: 324 SPTLGKHSRDKK----------------GGERCIWIPKTLRIDDPEEAAKSSIWATLGIK 343
           SPTLGKHSRD+                   ERC+WIPKTLRI DP EAAKSSIW TLGIK
Sbjct: 392 SPTLGKHSRDENVLKSSNSEEGESAKENNTERCLWIPKTLRIVDPGEAAKSSIWTTLGIK 451

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g08220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CDF2_ARATH4.3e-6947.14Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2[more]
CDF1_ARATH8.5e-5745.05Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2[more]
CDF5_ARATH1.5e-4235.54Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1[more]
CDF3_ARATH1.4e-3546.11Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2[more]
DOF13_ARATH4.5e-3433.52Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3 PE=3 SV=1[more]
BLAST of Cp4.1LG03g08220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D3L704_9ROSI1.0e-8847.78Dof zinc finger protein DOF5 OS=Juglans regia PE=2 SV=1[more]
A0A103YHE2_CYNCS3.8e-8851.05Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_0... [more]
A0A0U2T0P5_CAMSI6.5e-8854.02DNA binding with one finger 1 (Fragment) OS=Camellia sinensis PE=2 SV=1[more]
A0A142IXD4_CHRMO1.5e-8450.52DOF transcription factor 1 (Fragment) OS=Chrysanthemum morifolium PE=2 SV=1[more]
B9H0C1_POPTR7.6e-8144.88Ascorbate oxidase promoter-binding family protein OS=Populus trichocarpa GN=POPT... [more]
BLAST of Cp4.1LG03g08220 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G39660.12.4e-7047.14 cycling DOF factor 2[more]
AT5G62430.14.8e-5845.05 cycling DOF factor 1[more]
AT1G69570.18.7e-4435.54 Dof-type zinc finger DNA-binding family protein[more]
AT3G47500.17.9e-3746.11 cycling DOF factor 3[more]
AT1G26790.12.5e-3533.52 Dof-type zinc finger DNA-binding family protein[more]
BLAST of Cp4.1LG03g08220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085400|ref|XP_008443398.1|1.1e-11259.79PREDICTED: cyclic dof factor 2 [Cucumis melo][more]
gi|586637171|gb|AHJ79154.1|1.4e-8847.78dof zinc finger protein DOF5 [Juglans regia][more]
gi|976925245|gb|KVI09156.1|5.4e-8851.05hypothetical protein Ccrd_012516, partial [Cynara cardunculus var. scolymus][more]
gi|960516256|gb|ALR87188.1|9.3e-8854.02DNA binding with one finger 1, partial [Camellia sinensis][more]
gi|743929474|ref|XP_011008971.1|2.3e-8647.33PREDICTED: cyclic dof factor 3-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g08220.1Cp4.1LG03g08220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 57..122
score: 2.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 67..123
score: 3.2
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 71..107
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 69..123
score: 28
NoneNo IPR availablePANTHERPTHR31089FAMILY NOT NAMEDcoord: 48..341
score: 7.5E
NoneNo IPR availablePANTHERPTHR31089:SF4CYCLIC DOF FACTOR 2-RELATEDcoord: 48..341
score: 7.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g08220Cucsa.338740Cucumber (Gy14) v1cgycpeB0888
Cp4.1LG03g08220CmaCh11G010170Cucurbita maxima (Rimu)cmacpeB146
Cp4.1LG03g08220CmaCh14G005860Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g08220CmoCh11G010390Cucurbita moschata (Rifu)cmocpeB123
Cp4.1LG03g08220CmoCh14G005850Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g08220Cla016993Watermelon (97103) v1cpewmB597
Cp4.1LG03g08220Csa3G825020Cucumber (Chinese Long) v2cpecuB597
Cp4.1LG03g08220MELO3C009859Melon (DHL92) v3.5.1cpemeB572
Cp4.1LG03g08220ClCG10G015210Watermelon (Charleston Gray)cpewcgB546
Cp4.1LG03g08220CSPI03G38870Wild cucumber (PI 183967)cpecpiB599
Cp4.1LG03g08220Lsi03G014990Bottle gourd (USVL1VR-Ls)cpelsiB503
Cp4.1LG03g08220MELO3C009859.2Melon (DHL92) v3.6.1cpemedB679
Cp4.1LG03g08220MELO3C017178.2Melon (DHL92) v3.6.1cpemedB670
Cp4.1LG03g08220CsaV3_1G002390Cucumber (Chinese Long) v3cpecucB0740
Cp4.1LG03g08220CsaV3_3G041310Cucumber (Chinese Long) v3cpecucB0747
Cp4.1LG03g08220Bhi11G002470Wax gourdcpewgoB0743
Cp4.1LG03g08220CsGy3G036390Cucumber (Gy14) v2cgybcpeB395
Cp4.1LG03g08220CsGy1G002380Cucumber (Gy14) v2cgybcpeB108
Cp4.1LG03g08220Carg09789Silver-seed gourdcarcpeB0613
Cp4.1LG03g08220Carg22887Silver-seed gourdcarcpeB0301
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g08220Cp4.1LG04g01610Cucurbita pepo (Zucchini)cpecpeB475
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g08220Watermelon (97103) v1cpewmB592
Cp4.1LG03g08220Melon (DHL92) v3.6.1cpemedB652
Cp4.1LG03g08220Silver-seed gourdcarcpeB0378
Cp4.1LG03g08220Silver-seed gourdcarcpeB0968
Cp4.1LG03g08220Cucumber (Chinese Long) v3cpecucB0775
Cp4.1LG03g08220Wax gourdcpewgoB0768
Cp4.1LG03g08220Wax gourdcpewgoB0824
Cp4.1LG03g08220Cucurbita pepo (Zucchini)cpecpeB218
Cp4.1LG03g08220Cucurbita pepo (Zucchini)cpecpeB397
Cp4.1LG03g08220Cucumber (Gy14) v1cgycpeB0426
Cp4.1LG03g08220Cucurbita maxima (Rimu)cmacpeB327
Cp4.1LG03g08220Wild cucumber (PI 183967)cpecpiB623
Cp4.1LG03g08220Cucumber (Chinese Long) v2cpecuB621
Cp4.1LG03g08220Bottle gourd (USVL1VR-Ls)cpelsiB496
Cp4.1LG03g08220Watermelon (Charleston Gray)cpewcgB541