Carg22887 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22887
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	cyclic dof factor 2
Location	Cucurbita_argyrosperma_scaffold_124 : 46681 .. 49052 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAGTTGAAGGATCCGGCGATCAAGCTCTTTGGGAAGACGATTCCCTTGCCGGAGGCTTCTCCGGCCTCTCCTCTGCCGTCTTCTTTACCTATTGACGATAGCACTGCCACTGTTAATCACGACCGCGATTCTCCTTCTTCAACCGTCTCGCCGGAAGCCAATATCGATGGCGACGATGACGACGACGACGACGACGGTGAAGATCTGGAGGCTGATAAGGTATGGAGTTGCTTCTAATCGATTTGTTTTTTTGTATTTTCAAATACCCATTTGCTGGTTCGATTCAATTAGATTTTGTTGACTTAATTCAATCCGTTCTCGGAAATTTAGGTTTCTTTTCTCCTTTGATTTTCCTGATTTGTGGGCTTTGTGGGTTCCTCTGTTTAAGATGTTCTTGATTCTCATGAAGATTTTGGATTCCTATTTGATACTCAATTTTGACCTATTTAGTGATGTGGGTACTCTTTCTTTTGCTGTAATTTCCATAATTGGCTATGTAGAATTGATGGTTTCGGAATTTGGGGTTTGATTACTGATATCTTTTAGGCTGGTTGCTTGGTTTTGGTAATGTATGTTCATAAGGAGATTTGTGTTTTGGTGTATTAGGAGATTATAGGAGGGAAATCAAATGGAACTAATATGGAGGATCTTGATGGAGATGGAGATGAAAACTTGTCTAATTTGGAGAGTTCTAAAGTGGTTTGTGGTGAGGAAAGTAATCCCTCAAGTACTACCAAGAATGATGAACAGAATGAAACAAGTAACTCACAAGAGAAGACACTCAAGAAACCCGACAAGATACTTCCCTGCCCTCGTTGTAACAGCATGGATACCAAGTTCTGTTACTATAATAACTACAATGTTAATCAGCCACGCCACTTTTGTAAGAACTGTCAGAGGTATTGGACTGCTGGTGGGACGATGAGGAACGTTCCTGTGGGTGCAGGGCGTCGTAAGAACAAGAATTCTGCTTCTCATAACCGGCAGATTATTGTTTCGGAGGCATTTCAGCATGCTCGAACTGATGTTTCTAATGTTATGAGTCATTCTAGTCTTAGGCCTAATGGGAATGTGTTGGCATTTGGTTTGGATACGCCTCTTTGTGAATCAATGACTTCGATTTTGAACATTGCTGATCAAACAAGACAGAATGGCAGTAGAAATGGATTTAAGAAACCTGAAGCTTTGAAAATTCCTGTGGCTTATGAGAATGGAGAACATGATCATCATCAGTCTCAGGAATGTTGTGCTAATGAAGAAGCTAAAAGTGGAAGACAAGATCAAGTGATTCATGATTGTCAAGGCTTTTTACCTCAGATTCCATTCTTCCCTCCTGGGGCTCCTTGGCCTTACCCTTGGCATTCACCACAATGGAGCTCTCCTGTTCCTCCTCCTCCTAATTTCTATCCACCAGGCATTCCTGTGCCATTCTACCCGGCTGCTCCGTTTTGGGGTTGTACCGTTCCGAACCCCTGGACCCTCCCGTGGCTTCCGCAACCACCCTCTCTGAGCCCCATTACTCCAAACTCTCCAACCTTGGGGAAACATTCAAGAGATGAGAATGTGAGCAAACAGAGTGATTCTCGAGACGCCGTGCAGGAAAAAGACAACAAAGCTGAGAGATGTCTTTGGATACCGAAAACACTGAGAATCGACGACCCTGGCGAGGCAGCGAAAAGCTCCATATGGGCAACTCTAGGAATCAAGAATGACAAAACTGATTCAGTTAGTGAAGGGCTTTTCAAAGCCTTTGAATCGAAGAAGGGCGACGAAAAGAATCACAAAACCGAATCTTCTCCAGTGTTGCAAGTCAATCCAGCTGCATTGTCGAGATCTATCAAATTCCACGAAAGCTCGTAAAAAGGATCCAAAAAGTCTGATCATCAAACGTTATTTGGACAACACAAGTTGAAACCAAGTTAGAACTTCTATGTGTTCATCACTCAGTTCCGAAACTGTATAAATCTTTCAACCCATCCCACAGCTTGAGTTCGGTAGCGGAACACGAAAATGAGTTGATTTTATGTTGTATTTGTAGTGTTGAAGAAGTAGGAGGCATTTTGTTTGTAGTCTGGAAGTTTGTCTGAATGATGATGTAAATAGATATACATATATATGATATATATGATATATATGTAAATGTATGGGATGAAGGAAGAGTTAGTTAGTAGCAGAAGTAAGTGAGGTGTAGTAGTAGTACAAATAATGACTAAATGTGTACTTCAATAAATTCTTAGAAATCAATAATTGATCTTGCTTGTTATGGAAACGAAATTTGTGAGATCTCACGTCGAAGGGTGTGGAAGCCCGAAAGGGAAAAACTCAAAAAGAACAATATCTGTTAACAGTGGACTTGTGCTGTTAAA

mRNA sequence

ATGTCGGAGTTGAAGGATCCGGCGATCAAGCTCTTTGGGAAGACGATTCCCTTGCCGGAGGCTTCTCCGGCCTCTCCTCTGCCGTCTTCTTTACCTATTGACGATAGCACTGCCACTGTTAATCACGACCGCGATTCTCCTTCTTCAACCGTCTCGCCGGAAGCCAATATCGATGGCGACGATGACGACGACGACGACGACGGTGAAGATCTGGAGGCTGATAAGGAGATTATAGGAGGGAAATCAAATGGAACTAATATGGAGGATCTTGATGGAGATGGAGATGAAAACTTGTCTAATTTGGAGAGTTCTAAAGTGGTTTGTGGTGAGGAAAGTAATCCCTCAAGTACTACCAAGAATGATGAACAGAATGAAACAAGTAACTCACAAGAGAAGACACTCAAGAAACCCGACAAGATACTTCCCTGCCCTCGTTGTAACAGCATGGATACCAAGTTCTGTTACTATAATAACTACAATGTTAATCAGCCACGCCACTTTTGTAAGAACTGTCAGAGGTATTGGACTGCTGGTGGGACGATGAGGAACGTTCCTGTGGGTGCAGGGCGTCGTAAGAACAAGAATTCTGCTTCTCATAACCGGCAGATTATTGTTTCGGAGGCATTTCAGCATGCTCGAACTGATGTTTCTAATGTTATGAGTCATTCTAGTCTTAGGCCTAATGGGAATGTGTTGGCATTTGGTTTGGATACGCCTCTTTGTGAATCAATGACTTCGATTTTGAACATTGCTGATCAAACAAGACAGAATGGCAGTAGAAATGGATTTAAGAAACCTGAAGCTTTGAAAATTCCTGTGGCTTATGAGAATGGAGAACATGATCATCATCAGTCTCAGGAATGTTGTGCTAATGAAGAAGCTAAAAGTGGAAGACAAGATCAAGTGATTCATGATTGTCAAGGCTTTTTACCTCAGATTCCATTCTTCCCTCCTGGGGCTCCTTGGCCTTACCCTTGGCATTCACCACAATGGAGCTCTCCTGTTCCTCCTCCTCCTAATTTCTATCCACCAGGCATTCCTGTGCCATTCTACCCGGCTGCTCCGTTTTGGGGTTGTACCGTTCCGAACCCCTGGACCCTCCCGTGGCTTCCGCAACCACCCTCTCTGAGCCCCATTACTCCAAACTCTCCAACCTTGGGGAAACATTCAAGAGATGAGAATGTGAGCAAACAGAGTGATTCTCGAGACGCCGTGCAGGAAAAAGACAACAAAGCTGAGAGATGTCTTTGGATACCGAAAACACTGAGAATCGACGACCCTGGCGAGGCAGCGAAAAGCTCCATATGGGCAACTCTAGGAATCAAGAATGACAAAACTGATTCAGTTAGTGAAGGGCTTTTCAAAGCCTTTGAATCGAAGAAGGGCGACGAAAAGAATCACAAAACCGAATCTTCTCCAGTGTTGCAAGTCAATCCAGCTGCATTGTCGAGATCTATCAAATTCCACGAAAGCTCGTAAAAAGGATCCAAAAAGTCTGATCATCAAACGTTATTTGGACAACACAAGTTGAAACCAAGTTAGAACTTCTATGTGTTCATCACTCAGTTCCGAAACTGTATAAATCTTTCAACCCATCCCACAGCTTGAGTTCGGTAGCGGAACACGAAAATGAGTTGATTTTATGTTGTATTTGTAGTGTTGAAGAAGTAGGAGGCATTTTGTTTGTAGTCTGGAAGTTTGTCTGAATGATGATGTAAATAGATATACATATATATGATATATATGATATATATGTAAATGTATGGGATGAAGGAAGAGTTAGTTAGTAGCAGAAGTAAGTGAGGTGTAGTAGTAGTACAAATAATGACTAAATGTGTACTTCAATAAATTCTTAGAAATCAATAATTGATCTTGCTTGTTATGGAAACGAAATTTGTGAGATCTCACGTCGAAGGGTGTGGAAGCCCGAAAGGGAAAAACTCAAAAAGAACAATATCTGTTAACAGTGGACTTGTGCTGTTAAA

Coding sequence (CDS)

ATGTCGGAGTTGAAGGATCCGGCGATCAAGCTCTTTGGGAAGACGATTCCCTTGCCGGAGGCTTCTCCGGCCTCTCCTCTGCCGTCTTCTTTACCTATTGACGATAGCACTGCCACTGTTAATCACGACCGCGATTCTCCTTCTTCAACCGTCTCGCCGGAAGCCAATATCGATGGCGACGATGACGACGACGACGACGACGGTGAAGATCTGGAGGCTGATAAGGAGATTATAGGAGGGAAATCAAATGGAACTAATATGGAGGATCTTGATGGAGATGGAGATGAAAACTTGTCTAATTTGGAGAGTTCTAAAGTGGTTTGTGGTGAGGAAAGTAATCCCTCAAGTACTACCAAGAATGATGAACAGAATGAAACAAGTAACTCACAAGAGAAGACACTCAAGAAACCCGACAAGATACTTCCCTGCCCTCGTTGTAACAGCATGGATACCAAGTTCTGTTACTATAATAACTACAATGTTAATCAGCCACGCCACTTTTGTAAGAACTGTCAGAGGTATTGGACTGCTGGTGGGACGATGAGGAACGTTCCTGTGGGTGCAGGGCGTCGTAAGAACAAGAATTCTGCTTCTCATAACCGGCAGATTATTGTTTCGGAGGCATTTCAGCATGCTCGAACTGATGTTTCTAATGTTATGAGTCATTCTAGTCTTAGGCCTAATGGGAATGTGTTGGCATTTGGTTTGGATACGCCTCTTTGTGAATCAATGACTTCGATTTTGAACATTGCTGATCAAACAAGACAGAATGGCAGTAGAAATGGATTTAAGAAACCTGAAGCTTTGAAAATTCCTGTGGCTTATGAGAATGGAGAACATGATCATCATCAGTCTCAGGAATGTTGTGCTAATGAAGAAGCTAAAAGTGGAAGACAAGATCAAGTGATTCATGATTGTCAAGGCTTTTTACCTCAGATTCCATTCTTCCCTCCTGGGGCTCCTTGGCCTTACCCTTGGCATTCACCACAATGGAGCTCTCCTGTTCCTCCTCCTCCTAATTTCTATCCACCAGGCATTCCTGTGCCATTCTACCCGGCTGCTCCGTTTTGGGGTTGTACCGTTCCGAACCCCTGGACCCTCCCGTGGCTTCCGCAACCACCCTCTCTGAGCCCCATTACTCCAAACTCTCCAACCTTGGGGAAACATTCAAGAGATGAGAATGTGAGCAAACAGAGTGATTCTCGAGACGCCGTGCAGGAAAAAGACAACAAAGCTGAGAGATGTCTTTGGATACCGAAAACACTGAGAATCGACGACCCTGGCGAGGCAGCGAAAAGCTCCATATGGGCAACTCTAGGAATCAAGAATGACAAAACTGATTCAGTTAGTGAAGGGCTTTTCAAAGCCTTTGAATCGAAGAAGGGCGACGAAAAGAATCACAAAACCGAATCTTCTCCAGTGTTGCAAGTCAATCCAGCTGCATTGTCGAGATCTATCAAATTCCACGAAAGCTCGTAA

Protein sequence

MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSPSSTVSPEANIDGDDDDDDDDGEDLEADKEIIGGKSNGTNMEDLDGDGDENLSNLESSKVVCGEESNPSSTTKNDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQDQVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPPPPNFYPPGIPVPFYPAAPFWGCTVPNPWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNPAALSRSIKFHESS

Homology

[Close]

BLAST of Carg22887 vs. NCBI nr
Match: XP_023007572.1 (cyclic dof factor 2-like [Cucurbita maxima])

HSP 1 Score: 771.2 bits (1990), Expect = 2.2e-219
Identity = 467/492 (94.92%), Postives = 470/492 (95.53%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSPXXXXXXXXXXXXX 60
           MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSP        XXXXX
Sbjct: 1   MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSPSSTVSPDGXXXXX 60

Query: 61  XXXXXXXXXXLEADKEIIGGKSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXX  ADKEIIGGKSNG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 61  XXXXXXXXXXXXADKEIIGGKSNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKN 120

Query: 121 XXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGT 180
              NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGT
Sbjct: 121 DEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGT 180

Query: 181 MRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPL 240
           MRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAF  DTPL
Sbjct: 181 MRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFSSDTPL 240

Query: 241 CESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQD 300
           CESMTSILNIADQTRQ G+RNGFKKPEALKIPVAYENGEHDHHQSQE CANEEAKSGRQD
Sbjct: 241 CESMTSILNIADQTRQKGTRNGFKKPEALKIPVAYENGEHDHHQSQESCANEEAKSGRQD 300

Query: 301 QVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX 360
           QVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 QVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPK 420
           XXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDA QEKDNK+ERCLWIPK
Sbjct: 361 XXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAAQEKDNKSERCLWIPK 420

Query: 421 TLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNPA 480
           TLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKT+SSPVLQVNPA
Sbjct: 421 TLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTKSSPVLQVNPA 480

Query: 481 ALSRSIKFHESS 493
           ALSRSIKFHESS
Sbjct: 481 ALSRSIKFHESS 492

[Close]

BLAST of Carg22887 vs. NCBI nr
Match: XP_022933574.1 (cyclic dof factor 2-like [Cucurbita moschata])

HSP 1 Score: 770.0 bits (1987), Expect = 4.9e-219
Identity = 435/492 (88.41%), Postives = 437/492 (88.82%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSPXXXXXXXXXXXXX 60
           MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSP          XXX
Sbjct: 1   MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSPSSTVSPEGNIXXX 60

Query: 61  XXXXXXXXXXLEADKEIIGGKSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXX  ADKEI+GGKSNG                                    
Sbjct: 61  XXXXXXXXXXXXADKEIVGGKSNG-----TNVEDLDGDGDENLSKVVCGEESNPSSTTKN 120

Query: 121 XXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGT 180
              NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGT
Sbjct: 121 DEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGT 180

Query: 181 MRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPL 240
           MRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFG D PL
Sbjct: 181 MRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGSDKPL 240

Query: 241 CESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQD 300
           CESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQ  CANEEAKSGRQD
Sbjct: 241 CESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQGSCANEEAKSGRQD 300

Query: 301 QVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX 360
           QVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 QVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPK 420
           XXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDS+DAVQEKDNKAERCLWIPK
Sbjct: 361 XXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSQDAVQEKDNKAERCLWIPK 420

Query: 421 TLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNPA 480
           TLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNPA
Sbjct: 421 TLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNPA 480

Query: 481 ALSRSIKFHESS 493
           ALSRSIKFHESS
Sbjct: 481 ALSRSIKFHESS 487

[Close]

BLAST of Carg22887 vs. NCBI nr
Match: XP_023531538.1 (cyclic dof factor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 766.5 bits (1978), Expect = 5.4e-218
Identity = 443/493 (89.86%), Postives = 443/493 (89.86%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSP-XXXXXXXXXXXX 60
           MSELKDPAIKLFGKTIPLPE SPASPLPS LPIDDSTATVNHDRDSP    XXXXXXXXX
Sbjct: 1   MSELKDPAIKLFGKTIPLPEPSPASPLPSYLPIDDSTATVNHDRDSPSSTVXXXXXXXXX 60

Query: 61  XXXXXXXXXXXLEADKEIIGGKSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXX  ADKEIIGGKSNG                                   
Sbjct: 61  XXXXXXXXXXXXXADKEIIGGKSNG-----TNMEDLDGDGDENLSKVVCGEESNPSSTTK 120

Query: 121 XXXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG 180
               NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG
Sbjct: 121 NDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG 180

Query: 181 TMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTP 240
           TMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFG DTP
Sbjct: 181 TMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGSDTP 240

Query: 241 LCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQ 300
           LCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQE CANEEAKSGRQ
Sbjct: 241 LCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQESCANEEAKSGRQ 300

Query: 301 DQVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXX 360
           DQVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 DQVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIP 420
           XXXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDA QEKDNKAERCLWIP
Sbjct: 361 XXXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAAQEKDNKAERCLWIP 420

Query: 421 KTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNP 480
           KTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNP
Sbjct: 421 KTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQVNP 480

Query: 481 AALSRSIKFHESS 493
           AALSRSIKFHESS
Sbjct: 481 AALSRSIKFHESS 488

[Close]

BLAST of Carg22887 vs. NCBI nr
Match: XP_022156784.1 (cyclic dof factor 2 [Momordica charantia])

HSP 1 Score: 590.1 bits (1520), Expect = 6.9e-165
Identity = 355/520 (68.27%), Postives = 384/520 (73.85%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEASPASPLPSS------LPIDDSTATVNHDRDSPXXXXXXX 60
           MSE KDPAIKLFGKTI  PEASPA+P PSS         D + A V+HD DSP       
Sbjct: 1   MSEPKDPAIKLFGKTIAPPEASPATPPPSSSLATLVSAADGNYAAVSHDHDSP------- 60

Query: 61  XXXXXXXXXXXXXXXXLEADKEIIGGKSNG----------XXXXXXXXXXXXXXXXXXXX 120
                           LEA+KE +GGKS G                              
Sbjct: 61  SSRLSPEGNTDGDGEDLEAEKEPMGGKSGGTEQEDGDRAMSVSTEEFTNSDTSAVRSENS 120

Query: 121 XXXXXXXXXXXXXXXXXXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQP 180
                              NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQP
Sbjct: 121 KVPSGEESNLSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQP 180

Query: 181 RHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSS 240
           RHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASH RQIIVSEA QH+R +V+NV+ HS+
Sbjct: 181 RHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHQRQIIVSEALQHSRNNVTNVIHHSA 240

Query: 241 LRPNGNVLAFGLDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKIPV-AYENGEHDHH 300
           L+PNGNVLAFG DTPLCESM SILN+AD+TRQNG+RNGF KPEALKIP    +NGE+D  
Sbjct: 241 LKPNGNVLAFGSDTPLCESMASILNLADKTRQNGTRNGFHKPEALKIPAPPNQNGEND-D 300

Query: 301 QSQECCA------NEEAKSGRQDQVIHDCQGFL-PQIPFFPPGAPWPYPWHSPQWSSPVP 360
           QSQE  A      +EE K+G Q+QVIH+CQGFL PQIPFF PGAPWPYPW+SP+WSSP  
Sbjct: 301 QSQESAATPSFINSEEGKAGPQEQVIHNCQGFLPPQIPFF-PGAPWPYPWNSPRWSSP-X 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWTLPWLPQPPSLSPI----TPNSPTLGKHSRD 420
           XXXXXXXXXXXXXXXXXXXXXXXXXX  WT+PWLPQPPSL+ +     PNSPTLGKHSRD
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXGAWTIPWLPQPPSLNLVAQNHAPNSPTLGKHSRD 420

Query: 421 ENVSKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEG 480
           ENV+K SDS +  Q+ +NKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEG
Sbjct: 421 ENVNKPSDSGEDEQQNENKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEG 480

Query: 481 LFKAFESKKGDEKNHKTESSPVLQVNPAALSRSIKFHESS 493
           LFKAF   KGDEKNHK E SPVLQVNPAALSRSIKFHESS
Sbjct: 481 LFKAFHQPKGDEKNHKAEPSPVLQVNPAALSRSIKFHESS 510

[Close]

BLAST of Carg22887 vs. NCBI nr
Match: XP_004147502.1 (PREDICTED: cyclic dof factor 2-like [Cucumis sativus] >KGN59557.1 hypothetical protein Csa_3G825020 [Cucumis sativus])

HSP 1 Score: 578.6 bits (1490), Expect = 2.1e-161
Identity = 364/507 (71.79%), Postives = 394/507 (77.71%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEASPASP-LPSSLPIDDSTATVNHDRDSPXXXXXXXXXXXX 60
           MSE KDPAIKLFGKTIPLP+ SPA+P LPSSLPI    +  +H    P XXXXXXXXXXX
Sbjct: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPI---LSPPHHTTPLPNXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXLEADKEIIGGKSNG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXX  ++K +     NG                                   
Sbjct: 61  XXXXXXXXXXXAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPS 120

Query: 121 XXXXXXXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYW 180
                   NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYW
Sbjct: 121 TTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYW 180

Query: 181 TAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFG 240
           TAGGTMRNVPVGAGRRKNK+SASH+RQIIVSEA QHARTDV N + HS+L+PN NVLAFG
Sbjct: 181 TAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFG 240

Query: 241 LDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQEC-----CA 300
            D PLCESM SILNIADQTRQN +RNGF+KPEA KIPVAYENGE+D    +         
Sbjct: 241 SDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFIN 300

Query: 301 NEEAKSGRQDQVIHDCQGFL-PQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXX 360
           NEE K+G QDQVIH+CQGFL P +PFF PG PWPYPW+SPQWSSP  XXXXXXXXXXXXX
Sbjct: 301 NEEGKTGPQDQVIHNCQGFLPPHVPFF-PGTPWPYPWNSPQWSSP-XXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXWTLPWLPQPPSLSPI----TPNSPTLGKHSRDENVSKQSDSRDAV 420
           XXXXXXXXXXXXX  W +PW+ QPPSLSP+     PNSPTLGKHSRDENV++QSD  +  
Sbjct: 361 XXXXXXXXXXXXXGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDE 420

Query: 421 QEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEK 480
           Q+KD K E+CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK F+SKK DEK
Sbjct: 421 QQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEK 480

Query: 481 NHKTESSPVLQVNPAALSRSIKFHESS 493
           NHKTE+SPVLQVNPAALSRSIKFHESS
Sbjct: 481 NHKTEASPVLQVNPAALSRSIKFHESS 502

[Close]

BLAST of Carg22887 vs. TAIR10
Match: AT3G47500.1 (cycling DOF factor 3)

HSP 1 Score: 265.8 bits (678), Expect = 5.4e-71
Identity = 185/380 (48.68%), Postives = 212/380 (55.79%), Query Frame = 0


Query: 132 KTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRR 191
           KTLKKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAGGTMRNVPVGAGRR
Sbjct: 101 KTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR 160

Query: 192 KNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTP---LCESMTSIL 251
           KNK+S+SH R I +SEA + AR D         L+ N  VL+FGL+     +   MT ++
Sbjct: 161 KNKSSSSHYRHITISEALEAARLD-------PGLQANTRVLSFGLEAQQQHVAAPMTPVM 220

Query: 252 NI-ADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQDQVIHDCQ 311
            +  DQ   NG+RN F      ++    ENG+                            
Sbjct: 221 KLQEDQKVSNGARNRFHGLADQRLVARVENGDDCXXXXXXXXXXXXXXXXXXXXXXXXXX 280

Query: 312 GFLPQIPFFP-------PGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX 371
                            PG PWPY W+                     XXXXXXXXXXXX
Sbjct: 281 XXXXXXXXXXXNGYACIPGVPWPYTWNPAM----------------PPXXXXXXXXXXXX 340

Query: 372 XXXXWTLPWLPQPPSLSPIT-----PNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAER- 431
           XXXXWT+P LP   S SPI+      NSPTLGKH RDE  SK          KDN+ ER 
Sbjct: 341 XXXXWTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGSSK----------KDNETERK 400

Query: 432 ----CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTE 491
               C+ +PKTLRIDDP EAAKSSIW TLGIKN+       G+FK F+ K     N K E
Sbjct: 401 QKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIKNEAMCKAG-GMFKGFDHKTKMYNNDKAE 446

[Close]

BLAST of Carg22887 vs. TAIR10
Match: AT5G39660.1 (cycling DOF factor 2)

HSP 1 Score: 265.8 bits (678), Expect = 5.4e-71
Identity = 194/376 (51.60%), Postives = 225/376 (59.84%), Query Frame = 0


Query: 126 TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVP 185
           T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGGTMRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 186 VGAGRRKNKNSASH-NRQIIV--SEAFQH-ARTDVSNVMSHSSLRPNG-NVLAFGLDTPL 245
           VGAGRRKNK+ ASH NR + +  +EA Q  ARTD+ +        PNG N+L FG D+ L
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQH--------PNGANLLTFGSDSVL 242

Query: 246 CESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQD 305
           CESM S LN+ +++         +  E LKI V                 NEEA +    
Sbjct: 243 CESMASGLNLVEKSLLKTQTVLQEPNEGLKITVPLNQ------------TNEEAGTVSP- 302

Query: 306 QVIHDCQGFLPQIPFFP-PGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXX 365
                    LP++P FP P   WPY W+              XXXXXXXXXXXXXXXXXX
Sbjct: 303 ---------LPKVPCFPGPPPTWPYAWNG-----------VSXXXXXXXXXXXXXXXXXX 362

Query: 366 XXXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQS---DSRDAVQEKDNKAERCL 425
           XXXXX                PNSPTLGKHSRDEN ++     D  +++  + +K ERCL
Sbjct: 363 XXXXXXXXXXXXXXXXXXGSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKPERCL 422

Query: 426 WIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQ 485
           W+PKTLRIDDP EAAKSSIW TLGIK D+          + + K    +       P LQ
Sbjct: 423 WVPKTLRIDDPEEAAKSSIWETLGIKKDENADTFGAFRSSTKEKSSLSEGRLPGRRPELQ 457

Query: 486 VNPAALSRSIKFHESS 493
            NPAALSRS  FHESS
Sbjct: 483 ANPAALSRSANFHESS 457

[Close]

BLAST of Carg22887 vs. TAIR10
Match: AT5G62430.1 (cycling DOF factor 1)

HSP 1 Score: 196.1 bits (497), Expect = 5.2e-50
Identity = 143/367 (38.96%), Postives = 177/367 (48.23%), Query Frame = 0


Query: 128 NSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVG 187
           + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWT+GGTMR+VP+G
Sbjct: 41  SEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIG 100

Query: 188 AGRRKNKNSA--SHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPLCESMT 247
           AGRRKNKN++  SH   + +SE                    NG VL+F L         
Sbjct: 101 AGRRKNKNNSPTSHYHHVTISET-------------------NGPVLSFSL--------- 160

Query: 248 SILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQDQVIHD 307
                 D  + + +R G +     K+    EN +          +N    +G       +
Sbjct: 161 -----GDDQKVSSNRFGNQ-----KLVARIENNDER--------SNNNTSNGL------N 220

Query: 308 CQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 367
           C           PG  WPY W +P +    P                             
Sbjct: 221 CF----------PGVSWPYTW-NPAFYPVYPY---------------------------- 280

Query: 368 TLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPKTLRID 427
              W                LGKHSRDE+        + V++K       + +PKTLRID
Sbjct: 281 ---WSMXXXXXXXXXXXXXXLGKHSRDED--------ETVKQKQRNGS--VLVPKTLRID 296

Query: 428 DPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHK--TESSPVLQVNPAALS 487
           DP EAAKSSIW TLGIKN       E +F  F SKK  + ++K  TE+S VL  NPAALS
Sbjct: 341 DPNEAAKSSIWTTLGIKN-------EVMFNGFGSKKEVKLSNKEETETSLVLCANPAALS 296

Query: 488 RSIKFHE 491
           RSI FHE
Sbjct: 401 RSINFHE 296

[Close]

BLAST of Carg22887 vs. TAIR10
Match: AT1G69570.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 157.1 bits (396), Expect = 2.7e-38
Identity = 122/364 (33.52%), Postives = 173/364 (47.53%), Query Frame = 0


Query: 134 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 193
           LKKPDK++PCPRC S +TKFCYYNNYNVNQPR+FC+NCQRYWTAGG+MRNVPVG+GRRKN
Sbjct: 125 LKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184

Query: 194 KNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPLCESMTSILNIADQ 253
           K   S N  + V+        D  N         +G +L+FG       S +S+      
Sbjct: 185 KGWPSSNHYLQVTS------EDCDN-------NNSGTILSFG------SSESSVT----- 244

Query: 254 TRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQDQVIHDCQGFLPQI 313
                                 E G+H    + +  A+  ++  +        QGFLP  
Sbjct: 245 ----------------------ETGKHQSGDTAKISADSVSQENK------SYQGFLPPQ 304

Query: 314 PFFP-PGAPWPYPWHSPQWSS----PVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTLP 373
              P   +PWPY W SP   +    PVP                             T+P
Sbjct: 305 VMLPNNSSPWPYQW-SPTGPNASFYPVPFYWGC------------------------TVP 364

Query: 374 WLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPG 433
                  + P +  S  LGK SRD+   + +D+   +        R   + ++LR++   
Sbjct: 365 -------IYPTSETSSCLGKRSRDQTEGRINDTNTTI-----TTTRARLVSESLRMNI-- 396

Query: 434 EAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNH-KTESSPVLQVNPAALSRSIK 492
           EA+KS++W+ L  K +K  +    LF  F++K    ++   +E+S  LQ NPAA+SR++ 
Sbjct: 425 EASKSAVWSKLPTKPEK-KTQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMN 396

[Close]

BLAST of Carg22887 vs. TAIR10
Match: AT1G26790.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 132.1 bits (331), Expect = 9.3e-31
Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 134 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 193
           LKKPDKILPCPRCNS DTKFCYYNNYNVNQPRHFC+ CQRYWTAGG+MR VPVG+GRRKN
Sbjct: 128 LKKPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKN 187

Query: 194 KNSASHNRQI-IVSEAFQHARTDVSNVMSHSS 225
           K   S ++ + I SE   +  +  + ++S  S
Sbjct: 188 KGWVSSDQYLHITSEDTDNYNSSSTKILSFES 219

[Close]

BLAST of Carg22887 vs. Swiss-Prot
Match: sp|Q93ZL5|CDF2_ARATH (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 9.7e-70
Identity = 194/376 (51.60%), Postives = 225/376 (59.84%), Query Frame = 0


Query: 126 TSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVP 185
           T+ SQE  LKKPDKILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWTAGGTMRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 186 VGAGRRKNKNSASH-NRQIIV--SEAFQH-ARTDVSNVMSHSSLRPNG-NVLAFGLDTPL 245
           VGAGRRKNK+ ASH NR + +  +EA Q  ARTD+ +        PNG N+L FG D+ L
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSAEAMQKVARTDLQH--------PNGANLLTFGSDSVL 242

Query: 246 CESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQD 305
           CESM S LN+ +++         +  E LKI V                 NEEA +    
Sbjct: 243 CESMASGLNLVEKSLLKTQTVLQEPNEGLKITVPLNQ------------TNEEAGTVSP- 302

Query: 306 QVIHDCQGFLPQIPFFP-PGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXX 365
                    LP++P FP P   WPY W+              XXXXXXXXXXXXXXXXXX
Sbjct: 303 ---------LPKVPCFPGPPPTWPYAWNG-----------VSXXXXXXXXXXXXXXXXXX 362

Query: 366 XXXXXWTLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQS---DSRDAVQEKDNKAERCL 425
           XXXXX                PNSPTLGKHSRDEN ++     D  +++  + +K ERCL
Sbjct: 363 XXXXXXXXXXXXXXXXXXGSNPNSPTLGKHSRDENAAEPGTAFDETESLGREKSKPERCL 422

Query: 426 WIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSPVLQ 485
           W+PKTLRIDDP EAAKSSIW TLGIK D+          + + K    +       P LQ
Sbjct: 423 WVPKTLRIDDPEEAAKSSIWETLGIKKDENADTFGAFRSSTKEKSSLSEGRLPGRRPELQ 457

Query: 486 VNPAALSRSIKFHESS 493
            NPAALSRS  FHESS
Sbjct: 483 ANPAALSRSANFHESS 457

[Close]

BLAST of Carg22887 vs. Swiss-Prot
Match: sp|Q8LFV3|CDF3_ARATH (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 9.7e-70
Identity = 185/380 (48.68%), Postives = 212/380 (55.79%), Query Frame = 0


Query: 132 KTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRR 191
           KTLKKP KILPCPRC SM+TKFCYYNNYN+NQPRHFCK CQRYWTAGGTMRNVPVGAGRR
Sbjct: 101 KTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR 160

Query: 192 KNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTP---LCESMTSIL 251
           KNK+S+SH R I +SEA + AR D         L+ N  VL+FGL+     +   MT ++
Sbjct: 161 KNKSSSSHYRHITISEALEAARLD-------PGLQANTRVLSFGLEAQQQHVAAPMTPVM 220

Query: 252 NI-ADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQDQVIHDCQ 311
            +  DQ   NG+RN F      ++    ENG+                            
Sbjct: 221 KLQEDQKVSNGARNRFHGLADQRLVARVENGDDCXXXXXXXXXXXXXXXXXXXXXXXXXX 280

Query: 312 GFLPQIPFFP-------PGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXX 371
                            PG PWPY W+                     XXXXXXXXXXXX
Sbjct: 281 XXXXXXXXXXXNGYACIPGVPWPYTWNPAM----------------PPXXXXXXXXXXXX 340

Query: 372 XXXXWTLPWLPQPPSLSPIT-----PNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAER- 431
           XXXXWT+P LP   S SPI+      NSPTLGKH RDE  SK          KDN+ ER 
Sbjct: 341 XXXXWTIPMLPPHQSSSPISQKCSNTNSPTLGKHPRDEGSSK----------KDNETERK 400

Query: 432 ----CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTE 491
               C+ +PKTLRIDDP EAAKSSIW TLGIKN+       G+FK F+ K     N K E
Sbjct: 401 QKAGCVLVPKTLRIDDPNEAAKSSIWTTLGIKNEAMCKAG-GMFKGFDHKTKMYNNDKAE 446

[Close]

BLAST of Carg22887 vs. Swiss-Prot
Match: sp|Q8W1E3|CDF1_ARATH (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 9.5e-49
Identity = 143/367 (38.96%), Postives = 177/367 (48.23%), Query Frame = 0


Query: 128 NSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVG 187
           + ++KTLKKP KILPCPRCNSM+TKFCYYNNYNVNQPRHFCK CQRYWT+GGTMR+VP+G
Sbjct: 41  SEKDKTLKKPTKILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIG 100

Query: 188 AGRRKNKNSA--SHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPLCESMT 247
           AGRRKNKN++  SH   + +SE                    NG VL+F L         
Sbjct: 101 AGRRKNKNNSPTSHYHHVTISET-------------------NGPVLSFSL--------- 160

Query: 248 SILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQDQVIHD 307
                 D  + + +R G +     K+    EN +          +N    +G       +
Sbjct: 161 -----GDDQKVSSNRFGNQ-----KLVARIENNDER--------SNNNTSNGL------N 220

Query: 308 CQGFLPQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXW 367
           C           PG  WPY W +P +    P                             
Sbjct: 221 CF----------PGVSWPYTW-NPAFYPVYPY---------------------------- 280

Query: 368 TLPWLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPKTLRID 427
              W                LGKHSRDE+        + V++K       + +PKTLRID
Sbjct: 281 ---WSMXXXXXXXXXXXXXXLGKHSRDED--------ETVKQKQRNGS--VLVPKTLRID 296

Query: 428 DPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHK--TESSPVLQVNPAALS 487
           DP EAAKSSIW TLGIKN       E +F  F SKK  + ++K  TE+S VL  NPAALS
Sbjct: 341 DPNEAAKSSIWTTLGIKN-------EVMFNGFGSKKEVKLSNKEETETSLVLCANPAALS 296

Query: 488 RSIKFHE 491
           RSI FHE
Sbjct: 401 RSINFHE 296

[Close]

BLAST of Carg22887 vs. Swiss-Prot
Match: sp|Q9SEZ3|CDF5_ARATH (Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.9e-37
Identity = 122/364 (33.52%), Postives = 173/364 (47.53%), Query Frame = 0


Query: 134 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 193
           LKKPDK++PCPRC S +TKFCYYNNYNVNQPR+FC+NCQRYWTAGG+MRNVPVG+GRRKN
Sbjct: 125 LKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184

Query: 194 KNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPLCESMTSILNIADQ 253
           K   S N  + V+        D  N         +G +L+FG       S +S+      
Sbjct: 185 KGWPSSNHYLQVTS------EDCDN-------NNSGTILSFG------SSESSVT----- 244

Query: 254 TRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCANEEAKSGRQDQVIHDCQGFLPQI 313
                                 E G+H    + +  A+  ++  +        QGFLP  
Sbjct: 245 ----------------------ETGKHQSGDTAKISADSVSQENK------SYQGFLPPQ 304

Query: 314 PFFP-PGAPWPYPWHSPQWSS----PVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTLP 373
              P   +PWPY W SP   +    PVP                             T+P
Sbjct: 305 VMLPNNSSPWPYQW-SPTGPNASFYPVPFYWGC------------------------TVP 364

Query: 374 WLPQPPSLSPITPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPG 433
                  + P +  S  LGK SRD+   + +D+   +        R   + ++LR++   
Sbjct: 365 -------IYPTSETSSCLGKRSRDQTEGRINDTNTTI-----TTTRARLVSESLRMNI-- 396

Query: 434 EAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNH-KTESSPVLQVNPAALSRSIK 492
           EA+KS++W+ L  K +K  +    LF  F++K    ++   +E+S  LQ NPAA+SR++ 
Sbjct: 425 EASKSAVWSKLPTKPEK-KTQGFSLFNGFDTKGNSNRSSLVSETSHSLQANPAAMSRAMN 396

[Close]

BLAST of Carg22887 vs. Swiss-Prot
Match: sp|Q9LQX4|DOF13_ARATH (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-29
Identity = 61/92 (66.30%), Postives = 72/92 (78.26%), Query Frame = 0


Query: 134 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKN 193
           LKKPDKILPCPRCNS DTKFCYYNNYNVNQPRHFC+ CQRYWTAGG+MR VPVG+GRRKN
Sbjct: 98  LKKPDKILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKN 157

Query: 194 KNSASHNRQI-IVSEAFQHARTDVSNVMSHSS 225
           K   S ++ + I SE   +  +  + ++S  S
Sbjct: 158 KGWVSSDQYLHITSEDTDNYNSSSTKILSFES 189

[Close]

BLAST of Carg22887 vs. TrEMBL
Match: tr|A0A0A0LG12|A0A0A0LG12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825020 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.4e-161
Identity = 364/507 (71.79%), Postives = 394/507 (77.71%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEASPASP-LPSSLPIDDSTATVNHDRDSPXXXXXXXXXXXX 60
           MSE KDPAIKLFGKTIPLP+ SPA+P LPSSLPI    +  +H    P XXXXXXXXXXX
Sbjct: 1   MSEPKDPAIKLFGKTIPLPDPSPATPHLPSSLPI---LSPPHHTTPLPNXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXLEADKEIIGGKSNG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           XXXXXXXXXXX  ++K +     NG                                   
Sbjct: 61  XXXXXXXXXXXAVSEKSVGAKLENGDGGLSVSTEEFTNSDTSVVRSENSKVLSGDESNPS 120

Query: 121 XXXXXXXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYW 180
                   NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYW
Sbjct: 121 TTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYW 180

Query: 181 TAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFG 240
           TAGGTMRNVPVGAGRRKNK+SASH+RQIIVSEA QHARTDV N + HS+L+PN NVLAFG
Sbjct: 181 TAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNANVLAFG 240

Query: 241 LDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQEC-----CA 300
            D PLCESM SILNIADQTRQN +RNGF+KPEA KIPVAYENGE+D    +         
Sbjct: 241 SDAPLCESMASILNIADQTRQNSTRNGFQKPEAPKIPVAYENGENDDQSPESAPTPSFIN 300

Query: 301 NEEAKSGRQDQVIHDCQGFL-PQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXX 360
           NEE K+G QDQVIH+CQGFL P +PFF PG PWPYPW+SPQWSSP  XXXXXXXXXXXXX
Sbjct: 301 NEEGKTGPQDQVIHNCQGFLPPHVPFF-PGTPWPYPWNSPQWSSP-XXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXWTLPWLPQPPSLSPI----TPNSPTLGKHSRDENVSKQSDSRDAV 420
           XXXXXXXXXXXXX  W +PW+ QPPSLSP+     PNSPTLGKHSRDENV++QSD  +  
Sbjct: 361 XXXXXXXXXXXXXGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDE 420

Query: 421 QEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEK 480
           Q+KD K E+CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFK F+SKK DEK
Sbjct: 421 QQKDTKTEKCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKVFQSKKIDEK 480

Query: 481 NHKTESSPVLQVNPAALSRSIKFHESS 493
           NHKTE+SPVLQVNPAALSRSIKFHESS
Sbjct: 481 NHKTEASPVLQVNPAALSRSIKFHESS 502

[Close]

BLAST of Carg22887 vs. TrEMBL
Match: tr|A0A1S3B7G1|A0A1S3B7G1_CUCME (cyclic dof factor 2 OS=Cucumis melo OX=3656 GN=LOC103486992 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.6e-157
Identity = 315/379 (83.11%), Postives = 337/379 (88.92%), Query Frame = 0


Query: 124 NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRN 183
           NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRN
Sbjct: 139 NETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRN 198

Query: 184 VPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGNVLAFGLDTPLCES 243
           VPVGAGRRKNK+SASH+RQIIVSEA QHARTDV N + HS+L+PNGNVLAFG D PLCES
Sbjct: 199 VPVGAGRRKNKSSASHHRQIIVSEALQHARTDVPNGIHHSTLKPNGNVLAFGSDAPLCES 258

Query: 244 MTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDHHQSQECCA-----NEEAKSGR 303
           M SILNIAD+TRQN +RNGF+KPEALKIPVAYENGE+D  QSQE        NEE K+G 
Sbjct: 259 MASILNIADKTRQNSTRNGFQKPEALKIPVAYENGEND-DQSQESAPTPFINNEEGKTGP 318

Query: 304 QDQVIHDCQGFL-PQIPFFPPGAPWPYPWHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXX 363
           QDQVIH+CQGFL P +PFF PG PWPYPW+SPQWSSP  XXXXXXXXXXXXXXXXXXXXX
Sbjct: 319 QDQVIHNCQGFLPPHVPFF-PGTPWPYPWNSPQWSSP-XXXXXXXXXXXXXXXXXXXXXX 378

Query: 364 XXXXXXXWTLPWLPQPPSLSPI----TPNSPTLGKHSRDENVSKQSDSRDAVQEKDNKAE 423
           XXXXX  W +PW+ QPP LSP+     PNSPTLGKHSRDENV+KQSD  +  Q+KDNK E
Sbjct: 379 XXXXXGAWPIPWVSQPPPLSPVAQNHAPNSPTLGKHSRDENVTKQSDFGEHEQQKDNKTE 438

Query: 424 RCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFESKKGDEKNHKTESSP 483
           +CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAF+SKK DEKNHKTE+SP
Sbjct: 439 KCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEGLFKAFQSKKIDEKNHKTEASP 498

Query: 484 VLQVNPAALSRSIKFHESS 493
           VLQVNPAALSRSIKFHESS
Sbjct: 499 VLQVNPAALSRSIKFHESS 514

[Close]

BLAST of Carg22887 vs. TrEMBL
Match: tr|A0A2I4E3L9|A0A2I4E3L9_9ROSI (cyclic dof factor 2-like OS=Juglans regia OX=51240 GN=LOC108985957 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 303/529 (57.28%), Postives = 351/529 (66.35%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEA-------SPASPLPSSLPIDD------------STATVN 60
           MSE KDPAIKLFGKTIP+PE        S  +P PSS+P+ D            S+   N
Sbjct: 1   MSEAKDPAIKLFGKTIPVPEIPTNGSIDSSGAPAPSSVPVVDDNIDQDRACSTNSSPEAN 60

Query: 61  HDRDSPXXXXXXXXXXXXXXXXXXXXXXXLEADKEIIGGKSNG----------XXXXXXX 120
            DRD                           A+K+++G K +G                 
Sbjct: 61  TDRDGEER----------------------AAEKDVLGEKPSGNKQEGPGSPVSSEELTN 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNETSNSQEKTLKKPDKILPCPRCNSMDT 180
                                           +++SNSQEK LKKPDKILPCPRC+SMDT
Sbjct: 121 PDVTSGISENSKTLPVEKESATLKPSKSEEERSDSSNSQEKPLKKPDKILPCPRCSSMDT 180

Query: 181 KFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQH 240
           KFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKN+ASH R I VSEA Q+
Sbjct: 181 KFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNAASHYRHINVSEALQN 240

Query: 241 ARTDVSNVMSHSSLRPNGNVLAFGLDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKI 300
           A+TD+ N + H SLRP+G VL FG DTPLCESM S+LN+AD+T +N  +NGF +PE L+I
Sbjct: 241 AQTDLPNGVHHPSLRPDGTVLTFGSDTPLCESMASVLNLADKTMRNCKQNGFHRPEELRI 300

Query: 301 PVAYENGEHDHHQSQEC------CANEEAKSGRQDQVIHDCQGFLPQIPFFPPGAPWPYP 360
           PV+Y  GE+    S           +E  K+G Q+Q +  CQGF PQIP F PGAPWPYP
Sbjct: 301 PVSYGGGENGDDPSNGASVSTSNSTDEPGKTGSQEQAMRICQGFPPQIPCF-PGAPWPYP 360

Query: 361 WHSPQWSSPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTLPWLPQPPSLSPIT-PNSP 420
           W+S QWSSP  XXXXXXXXXXXXXXXXXXXXXXXXXX  W++PWLPQP S +P + PNSP
Sbjct: 361 WNSTQWSSP-XXXXXXXXXXXXXXXXXXXXXXXXXXXGAWSMPWLPQPTSPTPNSGPNSP 420

Query: 421 TLGKHSRDENVSKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKND 480
           TLGKHSRDENV K S+S +    K+N  ERCLWIPKTLRIDDPGEAAKSSIWATLGIKND
Sbjct: 421 TLGKHSRDENVLKSSNSGEGEPLKENNTERCLWIPKTLRIDDPGEAAKSSIWATLGIKND 480

Query: 481 KTDSVS-EGLFKAFESKKGDEKNHKTESSPVLQVNPAALSRSIKFHESS 493
           K +S+S  GLFKAF+S K D+KN+  E+SPVLQ NPAALSRS+ FHESS
Sbjct: 481 KANSISGGGLFKAFQS-KSDKKNNIAEASPVLQANPAALSRSLNFHESS 504

[Close]

BLAST of Carg22887 vs. TrEMBL
Match: tr|A0A2P4MRS9|A0A2P4MRS9_QUESU (Cyclic dof factor 2 OS=Quercus suber OX=58331 GN=CFP56_68894 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.3e-131
Identity = 307/521 (58.93%), Postives = 344/521 (66.03%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPE-----ASPASPLPSSLP---IDDSTATVNHDRDSPXXXXX 60
           MSE KDPAIKLFGKTIP+PE     +   S  PSS     +DD+   ++ DR S      
Sbjct: 1   MSEAKDPAIKLFGKTIPVPEVQANGSGDCSGAPSSCSGPLVDDN---IDQDRASSSSS-- 60

Query: 61  XXXXXXXXXXXXXXXXXXLEADKEIIGGKSNG----------XXXXXXXXXXXXXXXXXX 120
                               A+K+ IG K                               
Sbjct: 61  -------------------SAEKDTIGEKPTANKKEDGGLPVSSEESTNPDGASGISENP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVN 180
                                +E+SNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVN
Sbjct: 121 KTPSVEKESATLKASKTEEEHSESSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVN 180

Query: 181 QPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSH 240
           QPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASH R I VSEA Q+AR D+ N + H
Sbjct: 181 QPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITVSEALQNARVDLPNGVHH 240

Query: 241 SSLRPNGNVLAFGLDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEHDH 300
            SL  NG VL FG DTPLCESM S+LN+AD+T +N + NG  KPE L+IPV Y  GE+  
Sbjct: 241 PSLTSNGTVLTFGSDTPLCESMASVLNLADKTMRNCTPNGIHKPEELRIPVPYGGGENGD 300

Query: 301 HQSQECCA------NEEAKSGRQDQVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVP 360
            +S           +E  K G Q+QV+ + QGF PQIP F PGAPWPYPWHS QWSSP  
Sbjct: 301 DRSNGASVASSNQKDEPGKIGSQEQVMQNSQGFAPQIPCF-PGAPWPYPWHSAQWSSP-X 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWTLPWLPQPPSLSPIT----PNSPTLGKHSRD 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXW++PWLPQP S +       PNSPTLGKHSRD
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXWSIPWLPQPTSPNHTALSSGPNSPTLGKHSRD 420

Query: 421 ENVSKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVS-E 480
           EN+ K S+S D    K+N AERCLWIPKTLRIDDPGEAA+SSIWATLGIKNDK D++S  
Sbjct: 421 ENILKSSNSGDEEPLKENNAERCLWIPKTLRIDDPGEAARSSIWATLGIKNDKADTISGG 480

Query: 481 GLFKAFESKKGDEKNHKTESSPVLQVNPAALSRSIKFHESS 493
           GLFKAF+SK  DEKNH  E+SPVLQ NPAALSRS+ FHESS
Sbjct: 481 GLFKAFQSKT-DEKNHVAETSPVLQANPAALSRSLNFHESS 494

[Close]

BLAST of Carg22887 vs. TrEMBL
Match: tr|F6H5U5|F6H5U5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0108g00980 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.0e-128
Identity = 277/518 (53.47%), Postives = 316/518 (61.00%), Query Frame = 0


Query: 1   MSELKDPAIKLFGKTIPLPEASPASPLPSSLPIDDSTATVNHDRDSPXXXXXXXXXXXXX 60
           M+E KDPAIKLFGKTIPLPE + A+    S     S ATV    +               
Sbjct: 1   MAEAKDPAIKLFGKTIPLPEVATAAAGNDS----PSGATVGGGGED-WVDQNRATNSSPE 60

Query: 61  XXXXXXXXXXLEADKEIIGGK----------SNGXXXXXXXXXXXXXXXXXXXXXXXXXX 120
                      E DK+  GGK           +                           
Sbjct: 61  EDCVRAGEEGREVDKDTSGGKVTDTRQEDGARSSTSEEFTDPDANSGVNENPKTPSADKE 120

Query: 121 XXXXXXXXXXXXXNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKN 180
                        +ETS SQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKN
Sbjct: 121 TATLKCSKNEEEQSETSISQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKN 180

Query: 181 CQRYWTAGGTMRNVPVGAGRRKNKNSASHNRQIIVSEAFQHARTDVSNVMSHSSLRPNGN 240
           CQRYWTAGGTMRNVPVGAGRRKNKNS SH R I VSEA Q ARTDV N + H +L+ NG 
Sbjct: 181 CQRYWTAGGTMRNVPVGAGRRKNKNSTSHYRHITVSEALQSARTDVPNGIHHPALKTNGT 240

Query: 241 VLAFGLDTPLCESMTSILNIADQTRQNGSRNGFKKPEALKIPVAYENGEH-DHHQSQECC 300
           VL FG DTPLCESM S+LN+A++T +N + NGF KPE L+IPV Y  GE+ D H S+   
Sbjct: 241 VLTFGSDTPLCESMASVLNLAEKTMRNCTPNGFHKPEKLRIPVPYGGGENGDDHLSKSSV 300

Query: 301 A-----NEEAKSGRQDQVIHDCQGFLPQIPFFPPGAPWPYPWHSPQWSSPVP-----XXX 360
                  E  K+   DQV+ +C  F PQIP F PGAPWPYPW+S QWS PVP     XXX
Sbjct: 301 TASNSKEEAGKTALPDQVMRNCHAFPPQIPCF-PGAPWPYPWNSAQWSPPVPAIPPXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXWTLPWLPQPPSLSPIT----PNSPTLGKHSRDENV 420
           X      X                 W +PW+PQP +L+       PNSPTLGKHSRDEN+
Sbjct: 361 XFCPSGFXMPFYPAAAYWGCTVPGAWNIPWVPQPSALNHTAPSSGPNSPTLGKHSRDENM 420

Query: 421 SKQSDSRDAVQEKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSEG-LF 480
            K S+  +   +K+N +ERCLWIPKTLRIDDPGEAA+SSIWATLGIKNDK D +S G LF
Sbjct: 421 LKASNFGEEELQKENNSERCLWIPKTLRIDDPGEAARSSIWATLGIKNDKADPISGGRLF 480

Query: 481 KAFESKKGDEKNHKTESSPVLQVNPAALSRSIKFHESS 493
           K+F+S K DEKNH  E+SPVLQ NPAALSRS+ FHESS
Sbjct: 481 KSFQS-KADEKNHIAETSPVLQANPAALSRSLNFHESS 511

The following BLAST results are available for this feature:

BLAST of Carg22887 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023007572.1	2.2e-219	94.92	cyclic dof factor 2-like [Cucurbita maxima]	[more]
XP_022933574.1	4.9e-219	88.41	cyclic dof factor 2-like [Cucurbita moschata]	[more]
XP_023531538.1	5.4e-218	89.86	cyclic dof factor 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022156784.1	6.9e-165	68.27	cyclic dof factor 2 [Momordica charantia]	[more]
XP_004147502.1	2.1e-161	71.79	PREDICTED: cyclic dof factor 2-like [Cucumis sativus] >KGN59557.1 hypothetical p...	[more]

BLAST of Carg22887 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G47500.1	5.4e-71	48.68	cycling DOF factor 3	[more]
AT5G39660.1	5.4e-71	51.60	cycling DOF factor 2	[more]
AT5G62430.1	5.2e-50	38.96	cycling DOF factor 1	[more]
AT1G69570.1	2.7e-38	33.52	Dof-type zinc finger DNA-binding family protein	[more]
AT1G26790.1	9.3e-31	66.30	Dof-type zinc finger DNA-binding family protein	[more]

BLAST of Carg22887 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93ZL5\|CDF2_ARATH	9.7e-70	51.60	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
sp\|Q8LFV3\|CDF3_ARATH	9.7e-70	48.68	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]
sp\|Q8W1E3\|CDF1_ARATH	9.5e-49	38.96	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
sp\|Q9SEZ3\|CDF5_ARATH	4.9e-37	33.52	Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1	[more]
sp\|Q9LQX4\|DOF13_ARATH	1.7e-29	66.30	Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV...	[more]

BLAST of Carg22887 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LG12\|A0A0A0LG12_CUCSA	1.4e-161	71.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825020 PE=4 SV=1	[more]
tr\|A0A1S3B7G1\|A0A1S3B7G1_CUCME	1.6e-157	83.11	cyclic dof factor 2 OS=Cucumis melo OX=3656 GN=LOC103486992 PE=4 SV=1	[more]
tr\|A0A2I4E3L9\|A0A2I4E3L9_9ROSI	1.3e-132	57.28	cyclic dof factor 2-like OS=Juglans regia OX=51240 GN=LOC108985957 PE=4 SV=1	[more]
tr\|A0A2P4MRS9\|A0A2P4MRS9_QUESU	4.3e-131	58.93	Cyclic dof factor 2 OS=Quercus suber OX=58331 GN=CFP56_68894 PE=4 SV=1	[more]
tr\|F6H5U5\|F6H5U5_VITVI	2.0e-128	53.47	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0108g00980 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003851	Znf_Dof

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22887-RA	Carg22887-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 139..195 e-value: 3.9E-32 score: 110.1
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 143..179
IPR003851	Zinc finger, Dof-type	PRODOM	PD007478		coord: 134..194 e-value: 3.0E-31 score: 341.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 141..195 score: 28.975
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 458..478
None	No IPR available	PANTHER	PTHR31089	FAMILY NOT NAMED	coord: 1..491
None	No IPR available	PANTHER	PTHR31089:SF7	CYCLIC DOF FACTOR 1-RELATED	coord: 1..491

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22887	Cla010192	Watermelon (97103) v1	carwmB0202
Carg22887	Csa5G605720	Cucumber (Chinese Long) v2	carcuB0238
Carg22887	MELO3C012104	Melon (DHL92) v3.5.1	carmeB0217
Carg22887	ClCG05G024190	Watermelon (Charleston Gray)	carwcgB0209
Carg22887	CSPI05G23830	Wild cucumber (PI 183967)	carcpiB0245
Carg22887	Cucsa.284990	Cucumber (Gy14) v1	carcgyB0257
Carg22887	CmaCh11G010170	Cucurbita maxima (Rimu)	carcmaB0291
Carg22887	CmaCh14G005860	Cucurbita maxima (Rimu)	carcmaB0292
Carg22887	CmoCh14G005850	Cucurbita moschata (Rifu)	carcmoB0298
Carg22887	CmoCh11G010390	Cucurbita moschata (Rifu)	carcmoB0297
Carg22887	Cp4.1LG04g01610	Cucurbita pepo (Zucchini)	carcpeB0302
Carg22887	Cp4.1LG03g08220	Cucurbita pepo (Zucchini)	carcpeB0301
Carg22887	CsGy3G036390	Cucumber (Gy14) v2	carcgybB0226
Carg22887	CsGy5G023370	Cucumber (Gy14) v2	carcgybB0228
Carg22887	MELO3C009859.2	Melon (DHL92) v3.6.1	carmedB0225
Carg22887	MELO3C012104.2	Melon (DHL92) v3.6.1	carmedB0223
Carg22887	CsaV3_5G032810	Cucumber (Chinese Long) v3	carcucB0243
Carg22887	Bhi07G001269	Wax gourd	carwgoB0267

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22887	Carg09789	Silver-seed gourd	carcarB250

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22887	Silver-seed gourd	carcarB249
Carg22887	Silver-seed gourd	carcarB251
Carg22887	Cucumber (Gy14) v2	carcgybB0227
Carg22887	Cucumber (Gy14) v1	carcgyB0258
Carg22887	Wild cucumber (PI 183967)	carcpiB0243
Carg22887	Cucumber (Chinese Long) v2	carcuB0237
Carg22887	Cucumber (Chinese Long) v3	carcucB0241
Carg22887	Bottle gourd (USVL1VR-Ls)	carlsiB191
Carg22887	Melon (DHL92) v3.5.1	carmeB0219
Carg22887	Watermelon (Charleston Gray)	carwcgB0207
Carg22887	Watermelon (97103) v1	carwmB0201
Carg22887	Watermelon (97103) v2	carwmbB0215
Carg22887	Watermelon (97103) v2	carwmbB0217
Carg22887	Wax gourd	carwgoB0265
Carg22887	Wax gourd	carwgoB0266