Cp4.1LG03g08050 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g08050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG03 : 3057455 .. 3057931 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAAGCAGTTGAAAGAGAATCAAGAACCATTCATCTCCGGCACCGGCGAAGACGAGTTTCCGTCGGCGGAGGCAGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACTCTTCGAAGACGTGCAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACTGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAAATGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGTGAAGACATCGGCGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATCGGAGATTGGTGCGATGTTCGACATAATCCTCCTCACTCTTATCATAATGATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCTAGCTCGCCGCTCAGCGGGAAGAACAAATACAGAACTATAAGTTAA

mRNA sequence

ATGACGAAGCAGTTGAAAGAGAATCAAGAACCATTCATCTCCGGCACCGGCGAAGACGAGTTTCCGTCGGCGGAGGCAGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACTCTTCGAAGACGTGCAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACTGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAAATGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGTGAAGACATCGGCGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATCGGAGATTGGTGCGATGTTCGACATAATCCTCCTCACTCTTATCATAATGATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCTAGCTCGCCGCTCAGCGGGAAGAACAAATACAGAACTATAAGTTAA

Coding sequence (CDS)

ATGACGAAGCAGTTGAAAGAGAATCAAGAACCATTCATCTCCGGCACCGGCGAAGACGAGTTTCCGTCGGCGGAGGCAGAGTCGATGAGGTCGATTTGTAATCCTTGTGATTTTCACTCTTCGAAGACGTGCAAGGAAGTGGAAACGGATCAGGAAAGTATAGGATCGTCGGAGGAAACTGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAAATGGCGTATGTTCATTACCAGATTCGGAGAATCAGAGAGGAGGATTTGCATCTTGGTGAAGACATCGGCGAAGGCTTCAACGCGAAAGAGAAGATTAATTCGATCGGAGATTGGTGCGATGTTCGACATAATCCTCCTCACTCTTATCATAATGATCGCGTTAGTTCTCAGATGAATGTTGTAATTTTCTCGAGGCCGATCTTGCCTAGCTCGCCGCTCAGCGGGAAGAACAAATACAGAACTATAAGTTAA

Protein sequence

MTKQLKENQEPFISGTGEDEFPSAEAESMRSICNPCDFHSSKTCKEVETDQESIGSSEETESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS
Homology
[Close]
BLAST of Cp4.1LG03g08050 vs. TrEMBL
Match: A0A0A0LFA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G827220 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.5e-65
Identity = 135/165 (81.82%), Postives = 143/165 (86.67%), Query Frame = 1 

Query: 1   MTKQLKENQEPFISGTGEDEFPSAEA-ESMRSICNPCDFHSSKTCKEVETDQESIGSSEE 60
           MTKQLKENQEP ISG    +F +AE  ESMRSICNPCDFH+ KT KEVETDQESIGSSEE
Sbjct: 23  MTKQLKENQEPLISG---GDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEE 82

Query: 61  TESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSI-GDWCDVRH 120
           TESPKSVAKVADWRKK+AYVHYQ+RRIREEDLHLGEDIGEGFNAKEKINSI GDWCDV H
Sbjct: 83  TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH 142

Query: 121 N----PPH-SYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS 159
           N    PPH S+HN RV SQMNVVIFSRPILPSSPL GKN +R +S
Sbjct: 143 NNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 184

[Close]
BLAST of Cp4.1LG03g08050 vs. TrEMBL
Match: F6H5R5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g00450 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.4e-23
Identity = 66/107 (61.68%), Postives = 74/107 (69.16%), Query Frame = 1 

Query: 50  DQESIGSSEETESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINS 109
           DQES GSSEE ESPKSVAKV  W K  A VH Q+ RIREEDLHLGEDIGEG +AK+K++ 
Sbjct: 47  DQESGGSSEEFESPKSVAKVGKWTKNNACVHSQVLRIREEDLHLGEDIGEGLSAKDKVS- 106

Query: 110 IGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRT 157
                     P H      VSSQM+VV+ SRPILPSSPLSGK   +T
Sbjct: 107 ---------GPLH-----HVSSQMDVVLLSRPILPSSPLSGKTPIKT 138

[Close]
BLAST of Cp4.1LG03g08050 vs. TrEMBL
Match: A0A067LAJ8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09745 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-14
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 1 

Query: 42  KTCKEVETDQESIGSSEETE-SPKSVAKVADWR--KKMAYVHYQIRRIREEDLHLGEDIG 101
           K   E E D+ES GSSE+ E SPKSV K   WR  +K+ +VH Q+ +IREED HLGED  
Sbjct: 44  KVFTESEMDRESGGSSEDVEDSPKSVGK---WRNMEKLGFVHSQVLKIREEDSHLGEDFV 103

Query: 102 EGFNAKEKINSIGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGK 152
           EG +AK+K+ + G   +++          RV+S ++VV F+RP+LP SPL GK
Sbjct: 104 EGLSAKDKVINGGFGQNIQFR--------RVASAVDVVFFTRPVLPCSPLGGK 145

[Close]
BLAST of Cp4.1LG03g08050 vs. TrEMBL
Match: A0A059AQC8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01937 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-13
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1 

Query: 45  KEVETDQESIGSSEETESPKSVAKVADW----RKKMAYVHYQIRRIREEDLHLGEDIGEG 104
           +E  TD ES GS  E ESP+S+A    W     K++A +H Q+ RIREEDLHLGEDIGEG
Sbjct: 57  EEAATDAESGGSPVEVESPRSLA--GKWMRRAEKELARLHSQVLRIREEDLHLGEDIGEG 116

Query: 105 FNAKEKINSIGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGK 152
            +AK+K++S         +   +      +S+ +VV+FSRP LP SPLSGK
Sbjct: 117 LSAKDKVSSSSS------SGGAAVAVAVAASRADVVVFSRPNLPCSPLSGK 159

[Close]
BLAST of Cp4.1LG03g08050 vs. TrEMBL
Match: A0A061EM83_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_018487 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 9.5e-10
Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 1 

Query: 42  KTCKEVETDQESIGSSE-ETESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEG 101
           K+  EVE+ + S   +E E+ESP+SV  V + +KK+  VH QI RIREE+ HLGED   G
Sbjct: 21  KSVMEVESGESSTEEAEPESESPRSV--VMEMKKKVERVHSQILRIREEESHLGEDFVGG 80

Query: 102 FNAKEKINSIGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYR 156
              K+  N +     V       +H  R   ++NV++ SRP+LP SPLSGKN  R
Sbjct: 81  --DKKNKNDV-----VCGGGGEDFHEKR-RRRVNVLVVSRPVLPCSPLSGKNNVR 125

[Close]
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: gi|659085439|ref|XP_008443420.1| (PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 1.0e-65
Identity = 136/164 (82.93%), Postives = 143/164 (87.20%), Query Frame = 1 

Query: 1   MTKQLKENQEPFISGTGEDEFPSAEA-ESMRSICNPCDFHSSKTCKEVETDQESIGSSEE 60
           MTKQLKENQEP +SG    EFP+ EA ESMR ICNPCDFH+ KT KEVETDQESIGSSEE
Sbjct: 1   MTKQLKENQEPLVSG---GEFPATEAEESMRLICNPCDFHTPKTYKEVETDQESIGSSEE 60

Query: 61  TESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSI-GDWCDVRH 120
           TESPKSVAKVADWRKK+AYVHYQ+RRIREEDLHLGEDIGEGFNAKEKINSI GDWCDVR 
Sbjct: 61  TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVRD 120

Query: 121 N---PPH-SYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS 159
           N   PPH S+HN RV SQMNVVIFSRPILPSSPL GKN +R IS
Sbjct: 121 NNNPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRAIS 161

[Close]
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: gi|700204446|gb|KGN59579.1| (hypothetical protein Csa_3G827220 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 5.1e-65
Identity = 135/165 (81.82%), Postives = 143/165 (86.67%), Query Frame = 1 

Query: 1   MTKQLKENQEPFISGTGEDEFPSAEA-ESMRSICNPCDFHSSKTCKEVETDQESIGSSEE 60
           MTKQLKENQEP ISG    +F +AE  ESMRSICNPCDFH+ KT KEVETDQESIGSSEE
Sbjct: 23  MTKQLKENQEPLISG---GDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEE 82

Query: 61  TESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSI-GDWCDVRH 120
           TESPKSVAKVADWRKK+AYVHYQ+RRIREEDLHLGEDIGEGFNAKEKINSI GDWCDV H
Sbjct: 83  TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH 142

Query: 121 N----PPH-SYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS 159
           N    PPH S+HN RV SQMNVVIFSRPILPSSPL GKN +R +S
Sbjct: 143 NNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 184

[Close]
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: gi|778685575|ref|XP_011652239.1| (PREDICTED: uncharacterized protein LOC105435002 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 5.1e-65
Identity = 135/165 (81.82%), Postives = 143/165 (86.67%), Query Frame = 1 

Query: 1   MTKQLKENQEPFISGTGEDEFPSAEA-ESMRSICNPCDFHSSKTCKEVETDQESIGSSEE 60
           MTKQLKENQEP ISG    +F +AE  ESMRSICNPCDFH+ KT KEVETDQESIGSSEE
Sbjct: 1   MTKQLKENQEPLISG---GDFSAAEPEESMRSICNPCDFHTPKTYKEVETDQESIGSSEE 60

Query: 61  TESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSI-GDWCDVRH 120
           TESPKSVAKVADWRKK+AYVHYQ+RRIREEDLHLGEDIGEGFNAKEKINSI GDWCDV H
Sbjct: 61  TESPKSVAKVADWRKKLAYVHYQVRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVPH 120

Query: 121 N----PPH-SYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRTIS 159
           N    PPH S+HN RV SQMNVVIFSRPILPSSPL GKN +R +S
Sbjct: 121 NNPPPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS 162

[Close]
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: gi|731419518|ref|XP_010661048.1| (PREDICTED: uncharacterized protein LOC100242238 [Vitis vinifera])

HSP 1 Score: 115.9 bits (289), Expect = 6.3e-23
Identity = 66/107 (61.68%), Postives = 74/107 (69.16%), Query Frame = 1 

Query: 50  DQESIGSSEETESPKSVAKVADWRKKMAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINS 109
           DQES GSSEE ESPKSVAKV  W K  A VH Q+ RIREEDLHLGEDIGEG +AK+K++ 
Sbjct: 47  DQESGGSSEEFESPKSVAKVGKWTKNNACVHSQVLRIREEDLHLGEDIGEGLSAKDKVS- 106

Query: 110 IGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGKNKYRT 157
                     P H      VSSQM+VV+ SRPILPSSPLSGK   +T
Sbjct: 107 ---------GPLH-----HVSSQMDVVLLSRPILPSSPLSGKTPIKT 138

[Close]
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match: gi|802544745|ref|XP_012083107.1| (PREDICTED: uncharacterized protein LOC105642775 [Jatropha curcas])

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-14
Identity = 54/113 (47.79%), Postives = 73/113 (64.60%), Query Frame = 1 

Query: 42  KTCKEVETDQESIGSSEETE-SPKSVAKVADWR--KKMAYVHYQIRRIREEDLHLGEDIG 101
           K   E E D+ES GSSE+ E SPKSV K   WR  +K+ +VH Q+ +IREED HLGED  
Sbjct: 44  KVFTESEMDRESGGSSEDVEDSPKSVGK---WRNMEKLGFVHSQVLKIREEDSHLGEDFV 103

Query: 102 EGFNAKEKINSIGDWCDVRHNPPHSYHNDRVSSQMNVVIFSRPILPSSPLSGK 152
           EG +AK+K+ + G   +++          RV+S ++VV F+RP+LP SPL GK
Sbjct: 104 EGLSAKDKVINGGFGQNIQFR--------RVASAVDVVFFTRPVLPCSPLGGK 145

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g08050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g08050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFA4_CUCSA3.5e-6581.82Uncharacterized protein OS=Cucumis sativus GN=Csa_3G827220 PE=4 SV=1[more]
F6H5R5_VITVI4.4e-2361.68Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g00450 PE=4 SV=... [more]
A0A067LAJ8_JATCU2.2e-1447.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09745 PE=4 SV=1[more]
A0A059AQC8_EUCGR1.1e-1347.75Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01937 PE=4 SV=1[more]
A0A061EM83_THECC9.5e-1043.48Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_018487 PE=4 SV=1[more]
BLAST of Cp4.1LG03g08050 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g08050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085439|ref|XP_008443420.1|1.0e-6582.93PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo][more]
gi|700204446|gb|KGN59579.1|5.1e-6581.82hypothetical protein Csa_3G827220 [Cucumis sativus][more]
gi|778685575|ref|XP_011652239.1|5.1e-6581.82PREDICTED: uncharacterized protein LOC105435002 [Cucumis sativus][more]
gi|731419518|ref|XP_010661048.1|6.3e-2361.68PREDICTED: uncharacterized protein LOC100242238 [Vitis vinifera][more]
gi|802544745|ref|XP_012083107.1|3.1e-1447.79PREDICTED: uncharacterized protein LOC105642775 [Jatropha curcas][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g08050.1Cp4.1LG03g08050.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g08050CmaCh11G010320Cucurbita maxima (Rimu)cmacpeB146
Cp4.1LG03g08050CmaCh14G005990Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g08050CmoCh11G010520Cucurbita moschata (Rifu)cmocpeB123
Cp4.1LG03g08050CmoCh14G006070Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g08050Cla017016Watermelon (97103) v1cpewmB597
Cp4.1LG03g08050Csa3G827220Cucumber (Chinese Long) v2cpecuB597
Cp4.1LG03g08050MELO3C009881Melon (DHL92) v3.5.1cpemeB572
Cp4.1LG03g08050ClCG10G014960Watermelon (Charleston Gray)cpewcgB546
Cp4.1LG03g08050CSPI03G39110Wild cucumber (PI 183967)cpecpiB599
Cp4.1LG03g08050Lsi03G014720Bottle gourd (USVL1VR-Ls)cpelsiB503
Cp4.1LG03g08050MELO3C009881.2Melon (DHL92) v3.6.1cpemedB679
Cp4.1LG03g08050CsaV3_3G041560Cucumber (Chinese Long) v3cpecucB0747
Cp4.1LG03g08050Bhi11G002509Wax gourdcpewgoB0743
Cp4.1LG03g08050CsGy3G036690Cucumber (Gy14) v2cgybcpeB395
Cp4.1LG03g08050Carg09780Silver-seed gourdcarcpeB0613
Cp4.1LG03g08050Carg22898Silver-seed gourdcarcpeB0301
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g08050Cp4.1LG04g01490Cucurbita pepo (Zucchini)cpecpeB475
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g08050Wax gourdcpewgoB0768
Cp4.1LG03g08050Wax gourdcpewgoB0824
Cp4.1LG03g08050Cucurbita pepo (Zucchini)cpecpeB218
Cp4.1LG03g08050Cucurbita pepo (Zucchini)cpecpeB397
Cp4.1LG03g08050Cucumber (Gy14) v1cgycpeB0426
Cp4.1LG03g08050Cucumber (Gy14) v1cgycpeB0888
Cp4.1LG03g08050Cucurbita maxima (Rimu)cmacpeB327
Cp4.1LG03g08050Wild cucumber (PI 183967)cpecpiB623
Cp4.1LG03g08050Cucumber (Chinese Long) v2cpecuB621
Cp4.1LG03g08050Bottle gourd (USVL1VR-Ls)cpelsiB496
Cp4.1LG03g08050Watermelon (Charleston Gray)cpewcgB541
Cp4.1LG03g08050Watermelon (97103) v1cpewmB592
Cp4.1LG03g08050Cucumber (Gy14) v2cgybcpeB108
Cp4.1LG03g08050Melon (DHL92) v3.6.1cpemedB652
Cp4.1LG03g08050Melon (DHL92) v3.6.1cpemedB670
Cp4.1LG03g08050Silver-seed gourdcarcpeB0378
Cp4.1LG03g08050Silver-seed gourdcarcpeB0968
Cp4.1LG03g08050Cucumber (Chinese Long) v3cpecucB0740
Cp4.1LG03g08050Cucumber (Chinese Long) v3cpecucB0775