Cp4.1LG03g07180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g07180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	ATP synthase mitochondrial F1 complex assembly factor 2
Location	Cp4.1LG03 : 3591606 .. 3594669 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAGATCGTCCAGAGCACAGAAACGGGGGAAGAAGCAAGACAATGGCGAGCTCAATTCTTGCAAAAATGGCGAAATCAATCAGAATCGCCAATCCCACGCTAATTCCATCTCATTCGTTTCGCTGGCGTACGCTTACTACCAGTGTCGCCACCGCCGCCGAACAATCTCAAGCCGACGCCGCCTCCTTCACATTCTCCGAGGACAGTACTAGAGAAGATCCTATATTCGTCAAGGCTCCAAACACGAAATCCGGAGCTGATTCTTCATCCTATTCCAGTTCTTCGGTGACGATGCCGACCTCGTTCATGACTGGTTCTGTCGTAGGCAAGCGGTTTTACAAGCAAGTGACTACGAGAGAGGCAGATGATCGGAATGGATGGACGGTGATGCTTGATTACCGGACGCTGAAGACTCCTTCGAAGAGGCCGCTGAAGCTACCGACTCTTGGCCTTGCCAAGGCAGTTGCGGCTGAGTGGGAATATCAGGTGATTTCTCTCATCTTTTGCTCCTGAAGTTATCCTCATCCTTTTTGGAAGGTTATTGAAATTTCGTTTGTCTGGATTGAAATGAAGATTTGATCGATGTAGGAAACCGATGGGATTAGACCTTTCTCAATGCCTCTAATGAAACTTGCCTGTACCGCATTGGAAAGAGTGCCTCTTACCAGGCCCAAGATTATCGAACATTTAGTGCAGAAATTCAATCAGGATCTGGTTTTCTGTCGTGCTCCGGATGACAATGTTCTAACAAGTGGAGTTTATGGTATGTCAAGTAATCCTATGAGTCCAAACTTTACTAGATGCATTGAGCACGAGATTTACTTGAATTTCCATTCACTAGTTCGTCAAACGGCTGATCAACAGAATATGATCTATAGATTGAGTGGTCTTTTAGGTTTTCTCATTTGGATTTGGTTAGTTTAAGTTCATAACTCCTGTGTAGTTCATAACTCCTGATATCACTAAATCAACCACTTTTCCTTTGGTAGATTTTCGCGACATTTATGGTTATAGCTGCAATAACATCAATATCCTGATTGAGGGATCAACCACAATTTTTTGTTATAGCTGCAAAAACATCTGCATCATGATATGAGTGATCCCCGGGTTTTCTTAGTTGAAACTTCCAAAATTTTTGGCTGTAGCTGCAATAAGATCTAGATCCTGAATTATGTGATAAATCACTTTCTTATTATTATTATTGGTAAGAGGTCATGTCTAGATCCAGAAATTTTGAATGCCAGACCATGCATGTTGCAACATAGCTAAANTCTTTAGTTGAAACTTCCAAAATTTTTGGCTTTAGCTGCAATAAGATCTAGATCCTGAATTATGTGATAAATCACTTTCTTCTTATTATTATTATTGGTAAGAGGTCATGTCTAGATCCATAAATTTTGAATGCCAGACCATGCATGTTGCAACATAGCTAAAATATTGCATGTAAACATGGAATAGTAAGATATATATCCTGTATCTCTTTGCATCTCCTGTTGGAAGTTGATGATACTTTCTTGACAATTGCTTGACCTACTTTTTTGCAATTCAAAAACATAAAGAACTAGAATTGAAGATTGACCAATTTGTTTGATGAAAGAGATTATTATCTAGGACTGAATATTCATAAAGGTTGAATAAGGTTTCAGTACATAATTGGTGTTACATTTTCCTTGTAGAACGACAAGTGGAGAAAATCGATCCTTTACTCGACTGGGTGCGCTTAGAATTTGGCTTTAAGCCTATTGTATATTCCAGCTTTTTTGGTGGGAAACAGGAGGATGGTCTTATAAAGGCTGTTGAAGATCTTCTGAGGAAAACAGATGACTGTGAATTGGCATCAATTGATGCCATTGCATCAGCTGCACACTCTTTAGTAATTGCTATTGCAATTTTTCGTGGAAAGTTGCAGATTGAAGAAGCAATCGAGTTGATTAGACTCGAAGAAGATCTACAGGTTTAACTTCTTTTCCCTCATTCTTTATCATACATATACTTATTCCGAGTTGCAAGAGTCTAGGATAATGTCACATTAAGAAGCAAATGTCATAACATATTCTGAACCAAAAAGAACCTGCTCGAACATTTGCAGGTGGATAAATGGGGTCTGGTCGAAGGTGGTCACGATGTCGATATTGCTGATCTACGGGTTCAGATCTCATCTGCCGCAGTATTTCTTGCTCTTTCAAGGAGGTTTTGAATCCATTAATCTGATTACTTTCTTATCCTACCCTATCAGCTAGGATGTGCCTTTTTTTGGTTTTTTTTTTTTGTTGTAGATCCAAAGGGCCTTTCTAAATTATACTCCAAGACTGTTTATAAGACATCTTGTAGCTGTGAGCAGTTGAGAAAATAAGGAAGAGATTGTTTCTGTAAACACTTCCCTCTGGCCAAGAAAGAACCAAGTATTTAGATGTCACGCATTCAATCTTAGCTTAGGTTTGCGGGAATAAATCGAGATCACANGCATTCAATCTTAGCTTAGGTTTGCGGGAATAAATCGAGATCACATACAAAATAATGCATAAAAGGAGTGAAGTAGTAGTAGTAGCTGAGCATGTTTAGTAGGCATTGGCATTGTCAAGGCTCTTGGCAGCATTGCACGCAGAGAGGTGGTTGTTTATTGATATCACAGTTGCAGCAGGCAGTGTCACAGTCGTTATTGCACCCTACATTAGACATTTTCTGATATTAGAAAGCTCCTCTCTGGTTAAGATTTCATAATTGTTTAGTCAAGATTTGGCTGTCTCAATTCCTGACAAGTCTATGTTNATTCAAGATTTGGCCGTCTCAATTCCTGACAAGTCTATGTTCTCCTTTTATTAATTCACTATCTATTTTGATCATTGACAGAAAAATCACAGTTATTATCAAGAGTTTTGTTGATATTATGTGAAAATCNAGTCAAGATTTGGCTGTCTCAATTCCTGACAAGTCTATGTTCTTTTATTAATTCACTATCTATTTTGATCATTGACAGAAAAATCACAGTTATTATCAAGAGTTTTGTTGATATTATGTGAAAATTTCAAATTTATGAAAAATGTTGATAGCCATTGATATTTTG

mRNA sequence

ACAGATCGTCCAGAGCACAGAAACGGGGGAAGAAGCAAGACAATGGCGAGCTCAATTCTTGCAAAAATGGCGAAATCAATCAGAATCGCCAATCCCACGCTAATTCCATCTCATTCGTTTCGCTGGCGTACGCTTACTACCAGTGTCGCCACCGCCGCCGAACAATCTCAAGCCGACGCCGCCTCCTTCACATTCTCCGAGGACAGTACTAGAGAAGATCCTATATTCGTCAAGGCTCCAAACACGAAATCCGGAGCTGATTCTTCATCCTATTCCAGTTCTTCGGTGACGATGCCGACCTCGTTCATGACTGGTTCTGTCGTAGGCAAGCGGTTTTACAAGCAAGTGACTACGAGAGAGGCAGATGATCGGAATGGATGGACGGTGATGCTTGATTACCGGACGCTGAAGACTCCTTCGAAGAGGCCGCTGAAGCTACCGACTCTTGGCCTTGCCAAGGCAGTTGCGGCTGAGTGGGAATATCAGGAAACCGATGGGATTAGACCTTTCTCAATGCCTCTAATGAAACTTGCCTGTACCGCATTGGAAAGAGTGCCTCTTACCAGGCCCAAGATTATCGAACATTTAGTGCAGAAATTCAATCAGGATCTGGTTTTCTGTCGTGCTCCGGATGACAATGTTCTAACAAGTGGAGTTTATGGTATGTCAAGTAATCCTATGAGTCCAAACTTTACTAGATGCATTGAGCACGAGATTTACTTGAATTTCCATTCACTAGTTCGTCAAACGGCTGATCAACAGAATATGATCTATAGATTGAGTGGTCTTTTAGAACGACAAGTGGAGAAAATCGATCCTTTACTCGACTGGGTGCGCTTAGAATTTGGCTTTAAGCCTATTGTATATTCCAGCTTTTTTGGTGGGAAACAGGAGGATGGTCTTATAAAGGCTGTTGAAGATCTTCTGAGGAAAACAGATGACTGTGAATTGGCATCAATTGATGCCATTGCATCAGCTGCACACTCTTTAGTAATTGCTATTGCAATTTTTCGTGGAAAGTTGCAGATTGAAGAAGCAATCGAGTTGATTAGACTCGAAGAAGATCTACAGGTGGATAAATGGGGTCTGGTCGAAGGTGGTCACGATGTCGATATTGCTGATCTACGGGTTCAGATCTCATCTGCCGCAGTATTTCTTGCTCTTTCAAGGAGGTTTTGAATCCATTAATCTGATTACTTTCTTATCCTACCCTATCAGCTAGGATGTGCCTTTTTTTGGTTTTTTTTTTTTGTTGTAGATCCAAAGGGCCTTTCTAAATTATACTCCAAGACTGTTTATAAGACATCTTGTAGCTGTGAGCAGTTGAGAAAATAAGGAAGAGATTGTTTCTGTAAACACTTCCCTCTGGCCAAGAAAGAACCAAGTATTTAGATGTCACGCATTCAATCTTAGCTTAGGTTTGCGGGAATAAATCGAGATCACANGCATTCAATCTTAGCTTAGGTTTGCGGGAATAAATCGAGATCACATACAAAATAATGCATAAAAGGAGTGAAGTAGTAGTAGTAGCTGAGCATGTTTAGTAGGCATTGGCATTGTCAAGGCTCTTGGCAGCATTGCACGCAGAGAGGTGGTTGTTTATTGATATCACAGTTGCAGCAGGCAGTGTCACAGTCGTTATTGCACCCTACATTAGACATTTTCTGATATTAGAAAGCTCCTCTCTGGTTAAGATTTCATAATTGTTTAGTCAAGATTTGGCTGTCTCAATTCCTGACAAGTCTATGTTNATTCAAGATTTGGCCGTCTCAATTCCTGACAAGTCTATGTTCTCCTTTTATTAATTCACTATCTATTTTGATCATTGACAGAAAAATCACAGTTATTATCAAGAGTTTTGTTGATATTATGTGAAAATCNAGTCAAGATTTGGCTGTCTCAATTCCTGACAAGTCTATGTTCTTTTATTAATTCACTATCTATTTTGATCATTGACAGAAAAATCACAGTTATTATCAAGAGTTTTGTTGATATTATGTGAAAATTTCAAATTTATGAAAAATGTTGATAGCCATTGATATTTTG

Coding sequence (CDS)

ATGGCGAGCTCAATTCTTGCAAAAATGGCGAAATCAATCAGAATCGCCAATCCCACGCTAATTCCATCTCATTCGTTTCGCTGGCGTACGCTTACTACCAGTGTCGCCACCGCCGCCGAACAATCTCAAGCCGACGCCGCCTCCTTCACATTCTCCGAGGACAGTACTAGAGAAGATCCTATATTCGTCAAGGCTCCAAACACGAAATCCGGAGCTGATTCTTCATCCTATTCCAGTTCTTCGGTGACGATGCCGACCTCGTTCATGACTGGTTCTGTCGTAGGCAAGCGGTTTTACAAGCAAGTGACTACGAGAGAGGCAGATGATCGGAATGGATGGACGGTGATGCTTGATTACCGGACGCTGAAGACTCCTTCGAAGAGGCCGCTGAAGCTACCGACTCTTGGCCTTGCCAAGGCAGTTGCGGCTGAGTGGGAATATCAGGAAACCGATGGGATTAGACCTTTCTCAATGCCTCTAATGAAACTTGCCTGTACCGCATTGGAAAGAGTGCCTCTTACCAGGCCCAAGATTATCGAACATTTAGTGCAGAAATTCAATCAGGATCTGGTTTTCTGTCGTGCTCCGGATGACAATGTTCTAACAAGTGGAGTTTATGGTATGTCAAGTAATCCTATGAGTCCAAACTTTACTAGATGCATTGAGCACGAGATTTACTTGAATTTCCATTCACTAGTTCGTCAAACGGCTGATCAACAGAATATGATCTATAGATTGAGTGGTCTTTTAGAACGACAAGTGGAGAAAATCGATCCTTTACTCGACTGGGTGCGCTTAGAATTTGGCTTTAAGCCTATTGTATATTCCAGCTTTTTTGGTGGGAAACAGGAGGATGGTCTTATAAAGGCTGTTGAAGATCTTCTGAGGAAAACAGATGACTGTGAATTGGCATCAATTGATGCCATTGCATCAGCTGCACACTCTTTAGTAATTGCTATTGCAATTTTTCGTGGAAAGTTGCAGATTGAAGAAGCAATCGAGTTGATTAGACTCGAAGAAGATCTACAGGTGGATAAATGGGGTCTGGTCGAAGGTGGTCACGATGTCGATATTGCTGATCTACGGGTTCAGATCTCATCTGCCGCAGTATTTCTTGCTCTTTCAAGGAGGTTTTGA

Protein sequence

MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQADAASFTFSEDSTREDPIFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERVPLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFHSLVRQTADQQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIADLRVQISSAAVFLALSRRF

Homology

[Close]

BLAST of Cp4.1LG03g07180 vs. Swiss-Prot
Match: ATPF2_HUMAN (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens GN=ATPAF2 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.9e-10
Identity = 37/140 (26.43%), Postives = 72/140 (51.43%), Query Frame = 1


Query: 238 DQQNMIYRLSG---LLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDL 297
           D   + YR+     L+E Q  + DP+++W    +G +    +S  G        + +   
Sbjct: 136 DTDTICYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIPAKTREVLVSH 195

Query: 298 LRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGH 357
           L   +   L  I+ +A+   S+V+ + +   +L +E+A+ L RLEE+ Q+ KWG +E  H
Sbjct: 196 LASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAH 255

Query: 358 DVDIADLRVQISSAAVFLAL 375
           D ++ +LR + ++  +F+ L
Sbjct: 256 DYELQELRARTAAGTLFIHL 275

[Close]

BLAST of Cp4.1LG03g07180 vs. Swiss-Prot
Match: ATPF2_MOUSE (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus musculus GN=Atpaf2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.2e-09
Identity = 35/140 (25.00%), Postives = 71/140 (50.71%), Query Frame = 1


Query: 238 DQQNMIYRLSG---LLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDL 297
           D   + YR+     L+E Q  + DP+++W    +G +    +S  G        + +   
Sbjct: 136 DTDTICYRVEEPETLVELQKNEWDPVIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSH 195

Query: 298 LRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGH 357
           L   +   L  I+ + +   S+++ + +   +L +E+A+ L RLEE+ Q+ KWG +E  H
Sbjct: 196 LSSYNMWALQGIEFVVAQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAH 255

Query: 358 DVDIADLRVQISSAAVFLAL 375
           D ++ +LR + ++  +F+ L
Sbjct: 256 DYELQELRARTAAGTLFVHL 275

[Close]

BLAST of Cp4.1LG03g07180 vs. Swiss-Prot
Match: ATPF2_BOVIN (ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos taurus GN=ATPAF2 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-08
Identity = 37/140 (26.43%), Postives = 70/140 (50.00%), Query Frame = 1


Query: 238 DQQNMIYRLSG---LLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDL 297
           D   + YR+     L+E Q  + DP++ W    +G +    +S  G        + +   
Sbjct: 136 DTDTVCYRVEEPETLVELQRNEWDPVISWAEKRYGVEIGSSTSITGPSIPARTREVLVSH 195

Query: 298 LRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGH 357
           L   +   L  I+ + +   SLV+ + +   +L +E+A+ L RLEE+ Q+ KWG +E  H
Sbjct: 196 LASYNMWALQGIEFVVTQLKSLVLTLGLTDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAH 255

Query: 358 DVDIADLRVQISSAAVFLAL 375
           D ++ +LR + ++  +F+ L
Sbjct: 256 DYELQELRARTAAGTLFVHL 275

[Close]

BLAST of Cp4.1LG03g07180 vs. Swiss-Prot
Match: ATP12_YEAST (Protein ATP12, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATP12 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06
Identity = 65/310 (20.97%), Postives = 121/310 (39.03%), Query Frame = 1


Query: 85  PTSFMTGSVVGKRFYKQVTTREADDRNGWTVMLDYRTLKTPSKRPLKLPTLG--LAKAVA 144
           PT     S   ++F+++V+     ++    + LD RT+KTP    + +      LA  + 
Sbjct: 41  PTETNRLSKTSQKFWEKVSLNRDVEKGKIALQLDGRTIKTPLGNGIIVDNAKSLLAYLLK 100

Query: 145 AEWEYQETDGIRPFSMPLMKLACTALERVPLTRPKIIEHLVQKF--NQDLV---FCRAPD 204
            EW    +  I+  S+PL  L    ++      P     LV K   N D++     R  D
Sbjct: 101 LEWSSLSSLSIKTHSLPLTSLVARCIDLQMTNEPGCDPQLVAKIGGNSDVIKNQLLRYLD 160

Query: 205 DNVLTSGVYGMSSNPMSP--NFTRCIEHEIYL----NFHSLVRQTADQQNMIYRLSGLLE 264
            + L      +  +PM+      R  ++E+Y+         +R  + + N+         
Sbjct: 161 TDTL------LVFSPMNEFEGRLRNAQNELYIPIIKGMEEFLRNFSSESNI--------- 220

Query: 265 RQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDLLRKTDDCELASIDAIAS 324
            +++ +D  +  +R              G +Q D +  A +  +      +LA ++    
Sbjct: 221 -RLQILDADIHGLR--------------GNQQSDIVKNAAKKYMSSLSPWDLAILEKTVL 280

Query: 325 AAHSLVIAIAIFRGKLQIEEAIELIRLEED-----------LQVDKWGLVEGGHDVDIAD 371
              S +  + +   K      I  ++ + D            QV+KWG VE  HDVD  D
Sbjct: 281 TTKSFICGVLLLENKKDTANLIPALKTDMDNIVRAATLETIFQVEKWGEVEDTHDVDKRD 320

[Close]

BLAST of Cp4.1LG03g07180 vs. Swiss-Prot
Match: ATP12_SCHPO (Protein atp12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atp12 PE=3 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 3.4e-06
Identity = 36/129 (27.91%), Postives = 62/129 (48.06%), Query Frame = 1


Query: 249 LLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGG-------KQEDGLIKAVEDLLRKTDDC 308
           LLE Q E   PL +    + G    V  S+  G       KQ     + + + L   +  
Sbjct: 150 LLEEQKENWWPLKETFENKLG----VQLSYLDGDAGIIAHKQTQETHERIRNWLSSLNSW 209

Query: 309 ELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIADL 368
           +LA+ +   S   S +++  I +G L  E+A  L  LE   Q ++WG +E  H++D  DL
Sbjct: 210 QLAAFERSVSCCKSFIVSFMILKGYLNSEKAAALTNLELQYQTNRWGSLEDAHEIDNEDL 269

Query: 369 RVQISSAAV 371
           + +++S+A+
Sbjct: 270 KNKLASSAI 274

[Close]

BLAST of Cp4.1LG03g07180 vs. TrEMBL
Match: A0A0A0L8R2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595240 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.8e-107
Identity = 235/377 (62.33%), Postives = 262/377 (69.50%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQADAASFTFSEDSTREDP 60
           M+SSIL+KMAKSIRI NPTL PSHSFR+R L TSVATAAEQS  D  SFTFS D+ R++P
Sbjct: 1   MSSSILSKMAKSIRITNPTLSPSHSFRYRMLCTSVATAAEQSPLDDTSFTFSNDNPRDEP 60

Query: 61  IFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWTVMLDYR 120
           +FVKAP +    +SSS SSSSVTMPTSFMTGS+VGKRFY++VTTREADDRNGW VMLDYR
Sbjct: 61  VFVKAPRS----NSSSRSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDRNGWAVMLDYR 120

Query: 121 TLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERVPLTRPKIIE 180
           TLKTP+KR                          P  +P + LA              I 
Sbjct: 121 TLKTPTKR--------------------------PLKLPTLGLAKAVAAEWEYQETDGIR 180

Query: 181 HLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFHSLVRQTADQQ 240
                  +  + C A +   LT                  IEH I      LV   A ++
Sbjct: 181 PFTMPLMK--LACTALERVPLTRHTI--------------IEHLIKKFNSDLVFCRAPEE 240

Query: 241 NMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDLLRKTDD 300
           N++   SG+ ERQVEKIDPLLDWV  EFGFKPIVYSSFFGG QEDGLIKAVEDLL+KT+D
Sbjct: 241 NVL--TSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSFFGGNQEDGLIKAVEDLLKKTND 300

Query: 301 CELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD 360
           CELASIDAIASAAHSL+IAI IFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD
Sbjct: 301 CELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD 329

Query: 361 LRVQISSAAVFLALSRR 378
           L+VQISSA VFLALSRR
Sbjct: 361 LQVQISSATVFLALSRR 329

[Close]

BLAST of Cp4.1LG03g07180 vs. TrEMBL
Match: E5GCD8_CUCME (ATP12-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 7.6e-106
Identity = 233/378 (61.64%), Postives = 261/378 (69.05%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQADAASFTFSEDSTREDP 60
           M++SIL+ MAKSIRI NPTL PSHSFR+R L TSVATA EQS +DAASFTFS D+ RE+P
Sbjct: 1   MSTSILSIMAKSIRITNPTLTPSHSFRYRMLCTSVATAPEQSPSDAASFTFSNDNPREEP 60

Query: 61  IFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWTVMLDYR 120
           +F+KAP +    +SSS SSSSVTMPTSFMTGS+VGKRFY++VTTREADD NGWTVMLDYR
Sbjct: 61  VFIKAPRS----NSSSPSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDGNGWTVMLDYR 120

Query: 121 TLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERVPLTRPKIIE 180
           TLKTP+KR                          P  +P + LA              I 
Sbjct: 121 TLKTPTKR--------------------------PLKLPTLGLAKAVAAEWEYQETDGIR 180

Query: 181 HLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFHSLVRQTADQQ 240
                  +  + C A +   LT                + IEH +      LV   A + 
Sbjct: 181 PFTMPLMK--LACTALERVPLTR--------------PKIIEHLMGKFNRDLVFCRAPED 240

Query: 241 NMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDLLRKTDD 300
           ++    SG+ ERQVEKIDPLLDWV  EFGFKPIVYSS FGG QEDGLIKAVEDLLRKTDD
Sbjct: 241 DLT---SGVYERQVEKIDPLLDWVHSEFGFKPIVYSSLFGGNQEDGLIKAVEDLLRKTDD 300

Query: 301 CELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD 360
           CELASIDAIASAAHSL+IAI IFRGKLQIEEAIELIRLEED QVDKWGLVEGGHDVDIAD
Sbjct: 301 CELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDFQVDKWGLVEGGHDVDIAD 329

Query: 361 LRVQISSAAVFLALSRRF 379
           L+VQISSA VFLALSRRF
Sbjct: 361 LQVQISSATVFLALSRRF 329

[Close]

BLAST of Cp4.1LG03g07180 vs. TrEMBL
Match: A9PI48_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36070g PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.3e-89
Identity = 212/390 (54.36%), Postives = 254/390 (65.13%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLT---TSVATAAEQSQADAASFTF------ 60
           MA+S++ K   SI+  NP L+       R LT   TS+AT   QS+  ++SFTF      
Sbjct: 1   MATSLITKTLNSIK--NPKLL-------RPLTRQFTSIATV--QSENPSSSFTFADSDSN 60

Query: 61  SEDSTREDPIFVKA--PNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADD 120
           S  S  +  I+++   PN     +  S   SSVTMP S MTGS+VGKRFYKQVTTREADD
Sbjct: 61  SSSSCNDSNIYMRKGPPNCNVKGEKDS---SSVTMPMSSMTGSIVGKRFYKQVTTREADD 120

Query: 121 RNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPF--SMPLMKLACTA 180
            NGW VMLDYRTLKTPSKRPLKLPTL LAKA+AAEW+YQ+TDGIR    +MPLMKL    
Sbjct: 121 GNGWNVMLDYRTLKTPSKRPLKLPTLALAKAIAAEWDYQQTDGIR--PFTMPLMKL---- 180

Query: 181 LERVPLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYL 240
                                    C A D   LT                + IEH +  
Sbjct: 181 ------------------------ACTALDRVPLTR--------------PKIIEHLMKK 240

Query: 241 NFHSLVRQTADQQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGL 300
               LV   A + N++   SG+ ERQVEK DPL+ W++ EFGFKP+V+S  FGGKQE+GL
Sbjct: 241 FSQDLVFCRAPEDNVL--TSGVYERQVEKFDPLIGWIKSEFGFKPVVHSCLFGGKQEEGL 300

Query: 301 IKAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKW 360
           +KA+E+LL++TDDC+LA IDAIASAAHSL+IA+ I +GKL IEEAIELIRLEED QVD W
Sbjct: 301 VKAIENLLKQTDDCQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRLEEDFQVDTW 330

Query: 361 GLVEGGHDVDIADLRVQISSAAVFLALSRR 378
           GLVEGGHD+DIADLRVQISSAAVFL LSR+
Sbjct: 361 GLVEGGHDIDIADLRVQISSAAVFLGLSRK 330

[Close]

BLAST of Cp4.1LG03g07180 vs. TrEMBL
Match: A0A067LGA4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10198 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 9.6e-85
Identity = 203/378 (53.70%), Postives = 246/378 (65.08%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQAD-AASFTFSEDSTRE- 60
           MA+S++ +  KSI+  NP L+   S       TS+ATA +    D ++SFTF+ ++T   
Sbjct: 1   MATSLINRTLKSIK--NPKLLSPLSSSLTRHFTSIATAQQSPSDDPSSSFTFTGNATATT 60

Query: 61  DPIFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWTVMLD 120
           D IF+KAPN+ +  D++   SSSVTMP SFMTGS+VGKRFYKQVTTREADD NGWTVMLD
Sbjct: 61  DSIFLKAPNSNAKLDAAP--SSSVTMPMSFMTGSIVGKRFYKQVTTREADDGNGWTVMLD 120

Query: 121 YRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERVPLTRPKI 180
           YRTLKTPSK                          RP  +P + LA          +   
Sbjct: 121 YRTLKTPSK--------------------------RPLKLPTLALAKAIAAEWEYQQLDG 180

Query: 181 IEHLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFHSLVRQTAD 240
           I   +    +  + C A +   LT                + IEH +      LV   A 
Sbjct: 181 IRPFMMPLMK--LACTALERVPLTR--------------PKIIEHLMKKFNQDLVFCRAP 240

Query: 241 QQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDLLRKT 300
           + N + R  G+ ERQVEKIDPLLDWV+ EFGFKP+V+SSFFGGKQE+GL+KA+EDLL+KT
Sbjct: 241 EDNDLTR--GVYERQVEKIDPLLDWVKSEFGFKPVVHSSFFGGKQEEGLVKAIEDLLQKT 300

Query: 301 DDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDI 360
           D+ ELASIDAIA+AAHSLVIA+ IFRGKL IEEAI+LIRLEEDLQVDKWGLVEGGHDVDI
Sbjct: 301 DNFELASIDAIAAAAHSLVIAVGIFRGKLDIEEAIQLIRLEEDLQVDKWGLVEGGHDVDI 330

Query: 361 ADLRVQISSAAVFLALSR 377
           ADLRVQ+SSAAVFL LSR
Sbjct: 361 ADLRVQVSSAAVFLGLSR 330

[Close]

BLAST of Cp4.1LG03g07180 vs. TrEMBL
Match: B9SLS3_RICCO (ATP synthase mitochondrial F1 complex assembly factor 2, mitochondrial, putative OS=Ricinus communis GN=RCOM_0530930 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.0e-82
Identity = 200/388 (51.55%), Postives = 248/388 (63.92%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQADAAS--FTFSEDSTR- 60
           MA+S++ K   SI+  NP L+   S       T+ ATAA  +Q+D  S  FTF++ +T  
Sbjct: 1   MATSLITKTLNSIK--NPRLLSPLSSSVTHHFTTAATAATAAQSDGPSSPFTFTDTATST 60

Query: 61  EDPIFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWTVML 120
            + I +K PN  +  +++S+SSSSVTMP SFMTGS+VGKRFYK+VTTREADD  G+TVML
Sbjct: 61  NNSIHMKTPNPDARGEATSFSSSSVTMPMSFMTGSIVGKRFYKKVTTREADDGIGYTVML 120

Query: 121 DYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLA--------CTALE 180
           DYRTLKTPSK+PL                           +P + LA        C   +
Sbjct: 121 DYRTLKTPSKKPL--------------------------KLPTLSLAKAIAAEWDCQQTD 180

Query: 181 RV-PLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLN 240
            + P T P +            + C A +   LT                + IE+ +   
Sbjct: 181 GIRPFTMPLM-----------KLACTALERVPLTR--------------LKIIENLMKKF 240

Query: 241 FHSLVRQTADQQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLI 300
              LV   A + N +   SG+ ERQVEKIDPLLDWV+ EFGFKP+VYSSFFGGKQE+GL+
Sbjct: 241 NQDLVFCRAPEDNDL--TSGVYERQVEKIDPLLDWVKSEFGFKPVVYSSFFGGKQEEGLV 300

Query: 301 KAVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWG 360
           KA+EDLL+KTD+CELA+IDAIA++AHSLVIAI I RGKL IEEAI+LIRLEEDLQVD+WG
Sbjct: 301 KAIEDLLKKTDNCELAAIDAIAASAHSLVIAIGIVRGKLDIEEAIQLIRLEEDLQVDRWG 333

Query: 361 LVEGGHDVDIADLRVQISSAAVFLALSR 377
           LVEGGHD+DIADLRVQISSAAVFL LSR
Sbjct: 361 LVEGGHDIDIADLRVQISSAAVFLGLSR 333

[Close]

BLAST of Cp4.1LG03g07180 vs. TAIR10
Match: AT5G40660.1 (AT5G40660.1 ATP12 protein-related)

HSP 1 Score: 278.1 bits (710), Expect = 8.1e-75
Identity = 187/384 (48.70%), Postives = 238/384 (61.98%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQAD------AASFTFSED 60
           MA+ ++ +  KS R +N  +      R R+L T+  +AA Q  +D      ++SFTF ++
Sbjct: 1   MAAMLIGRAFKSARNSNLAI------RARSLCTT--SAARQPDSDTQPSESSSSFTFEKE 60

Query: 61  STREDPIFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWT 120
           +  E PI VKAPN++   +S S     VTMPTSFMTGS+VGKRFYK+VTTREADD NGWT
Sbjct: 61  N--EKPILVKAPNSRRKNESDS-----VTMPTSFMTGSIVGKRFYKKVTTREADDGNGWT 120

Query: 121 VMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERVPLT 180
           VMLDYRTLKTPSKRP                       ++  S+ L K A  A     LT
Sbjct: 121 VMLDYRTLKTPSKRP-----------------------LKLRSLALAK-AIAAEWEYQLT 180

Query: 181 RPKIIEHLVQKFNQDLV--FCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFHSL 240
                   ++ F   L+   C A +   LT               ++ IEH        L
Sbjct: 181 EG------IRPFTMPLMRLACTALERVPLTR--------------SKIIEHLSRKIHQDL 240

Query: 241 VRQTADQQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVE 300
           V   A + N +   S + + QVE IDPLL+W+  EF  KP VYSS FGGKQ+D L+KAVE
Sbjct: 241 VFFRAPEDNDL--TSDVHDIQVESIDPLLEWIESEFRVKPKVYSSIFGGKQDDKLVKAVE 300

Query: 301 DLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEG 360
           +LL+KT+D ELASIDA+ ++AHS+VIA+ IF GKLQI++AI+LIRLEEDLQVDKWGLVEG
Sbjct: 301 ELLKKTNDGELASIDALQASAHSIVIALGIFCGKLQIDDAIKLIRLEEDLQVDKWGLVEG 323

Query: 361 GHDVDIADLRVQISSAAVFLALSR 377
           GHD+D+ADL+VQISSA VFLALSR
Sbjct: 361 GHDIDVADLKVQISSATVFLALSR 323

[Close]

BLAST of Cp4.1LG03g07180 vs. NCBI nr
Match: gi|449455898|ref|XP_004145687.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 9.8e-107
Identity = 235/377 (62.33%), Postives = 262/377 (69.50%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQADAASFTFSEDSTREDP 60
           M+SSIL+KMAKSIRI NPTL PSHSFR+R L TSVATAAEQS  D  SFTFS D+ R++P
Sbjct: 1   MSSSILSKMAKSIRITNPTLSPSHSFRYRMLCTSVATAAEQSPLDDTSFTFSNDNPRDEP 60

Query: 61  IFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWTVMLDYR 120
           +FVKAP +    +SSS SSSSVTMPTSFMTGS+VGKRFY++VTTREADDRNGW VMLDYR
Sbjct: 61  VFVKAPRS----NSSSRSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDRNGWAVMLDYR 120

Query: 121 TLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERVPLTRPKIIE 180
           TLKTP+KR                          P  +P + LA              I 
Sbjct: 121 TLKTPTKR--------------------------PLKLPTLGLAKAVAAEWEYQETDGIR 180

Query: 181 HLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFHSLVRQTADQQ 240
                  +  + C A +   LT                  IEH I      LV   A ++
Sbjct: 181 PFTMPLMK--LACTALERVPLTRHTI--------------IEHLIKKFNSDLVFCRAPEE 240

Query: 241 NMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDLLRKTDD 300
           N++   SG+ ERQVEKIDPLLDWV  EFGFKPIVYSSFFGG QEDGLIKAVEDLL+KT+D
Sbjct: 241 NVL--TSGVYERQVEKIDPLLDWVHSEFGFKPIVYSSFFGGNQEDGLIKAVEDLLKKTND 300

Query: 301 CELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD 360
           CELASIDAIASAAHSL+IAI IFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD
Sbjct: 301 CELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD 329

Query: 361 LRVQISSAAVFLALSRR 378
           L+VQISSA VFLALSRR
Sbjct: 361 LQVQISSATVFLALSRR 329

[Close]

BLAST of Cp4.1LG03g07180 vs. NCBI nr
Match: gi|659098220|ref|XP_008450034.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 isoform X1 [Cucumis melo])

HSP 1 Score: 392.1 bits (1006), Expect = 1.1e-105
Identity = 233/378 (61.64%), Postives = 261/378 (69.05%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQADAASFTFSEDSTREDP 60
           M++SIL+ MAKSIRI NPTL PSHSFR+R L TSVATA EQS +DAASFTFS D+ RE+P
Sbjct: 1   MSTSILSIMAKSIRITNPTLTPSHSFRYRMLCTSVATAPEQSPSDAASFTFSNDNPREEP 60

Query: 61  IFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDRNGWTVMLDYR 120
           +F+KAP +    +SSS SSSSVTMPTSFMTGS+VGKRFY++VTTREADD NGWTVMLDYR
Sbjct: 61  VFIKAPRS----NSSSPSSSSVTMPTSFMTGSIVGKRFYQKVTTREADDGNGWTVMLDYR 120

Query: 121 TLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALERVPLTRPKIIE 180
           TLKTP+KR                          P  +P + LA              I 
Sbjct: 121 TLKTPTKR--------------------------PLKLPTLGLAKAVAAEWEYQETDGIR 180

Query: 181 HLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFHSLVRQTADQQ 240
                  +  + C A +   LT                + IEH +      LV   A + 
Sbjct: 181 PFTMPLMK--LACTALERVPLTR--------------PKIIEHLMGKFNRDLVFCRAPED 240

Query: 241 NMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKAVEDLLRKTDD 300
           ++    SG+ ERQVEKIDPLLDWV  EFGFKPIVYSS FGG QEDGLIKAVEDLLRKTDD
Sbjct: 241 DLT---SGVYERQVEKIDPLLDWVHSEFGFKPIVYSSLFGGNQEDGLIKAVEDLLRKTDD 300

Query: 301 CELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLVEGGHDVDIAD 360
           CELASIDAIASAAHSL+IAI IFRGKLQIEEAIELIRLEED QVDKWGLVEGGHDVDIAD
Sbjct: 301 CELASIDAIASAAHSLIIAIGIFRGKLQIEEAIELIRLEEDFQVDKWGLVEGGHDVDIAD 329

Query: 361 LRVQISSAAVFLALSRRF 379
           L+VQISSA VFLALSRRF
Sbjct: 361 LQVQISSATVFLALSRRF 329

[Close]

BLAST of Cp4.1LG03g07180 vs. NCBI nr
Match: gi|658025204|ref|XP_008348009.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2-like [Malus domestica])

HSP 1 Score: 365.5 bits (937), Expect = 1.1e-97
Identity = 223/387 (57.62%), Postives = 262/387 (67.70%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQAD--AASFTFSED---- 60
           MA+ ++ +  KS+   N  LI S S R R  +++     EQ Q+D  ++SFTFS D    
Sbjct: 1   MANLLINRTLKSV--GNLKLIGSLSSRARPFSSTATATFEQPQSDGPSSSFTFSSDGKED 60

Query: 61  ----STREDPIFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDR 120
               S  +D I+VK+P++ S   S S ++SSVTMP SFMTGS+VGKRFYKQVTTR ADD 
Sbjct: 61  KNNSSAHDDSIYVKSPSSSS---SKSEAASSVTMPMSFMTGSIVGKRFYKQVTTRPADDG 120

Query: 121 NGWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALER 180
           NGWTVMLDYRTLKTPSKRPLKLPTL LAKA+AAEWEYQETDGIR                
Sbjct: 121 NGWTVMLDYRTLKTPSKRPLKLPTLALAKAIAAEWEYQETDGIR---------------- 180

Query: 181 VPLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFH 240
            P T P +++H           C A +   LT            P    C+  +      
Sbjct: 181 -PFTMP-LMKHA----------CTALERVPLTR-----------PKVIDCLMKKFN---Q 240

Query: 241 SLVRQTADQQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKA 300
            LV   A   N I   S + +RQVEK+DPLLDWV+ EFGFKP VYSSFFGGKQEDGL KA
Sbjct: 241 DLVFCRAPNDNDI--TSVVHDRQVEKMDPLLDWVKSEFGFKPAVYSSFFGGKQEDGLTKA 300

Query: 301 VEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLV 360
           +E LL++T+DCELA+IDAIAS+AHSL+IAI IFRGKLQIEEAIELIRLEED+QVD+WGLV
Sbjct: 301 IETLLKQTBDCELAAIDAIASSAHSLIIAIGIFRGKLQIEEAIELIRLEEDIQVDRWGLV 338

Query: 361 EGGHDVDIADLRVQISSAAVFLALSRR 378
           EGGHDVD ADLRVQISSAAVFL LSRR
Sbjct: 361 EGGHDVDAADLRVQISSAAVFLGLSRR 338

[Close]

BLAST of Cp4.1LG03g07180 vs. NCBI nr
Match: gi|694426339|ref|XP_009340852.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2-like [Pyrus x bretschneideri])

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-95
Identity = 221/387 (57.11%), Postives = 262/387 (67.70%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLTTSVATAAEQSQADA--ASFTFSED---- 60
           MA+ ++ +  +S+   N  LI S S R R  ++S    AEQ Q+DA  +SFTFS +    
Sbjct: 1   MANLLINRTLRSV--GNLKLIGSLSSRARHFSSSATATAEQPQSDAPSSSFTFSSEGKED 60

Query: 61  ----STREDPIFVKAPNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADDR 120
               S  +D I+VK+P++ S   S S ++SSVTMP SFMTGS+VGKRFYKQVTTR ADD 
Sbjct: 61  KNYSSAHDDSIYVKSPSSSS---SKSEAASSVTMPMSFMTGSIVGKRFYKQVTTRPADDG 120

Query: 121 NGWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALER 180
           NGWTVMLDYRTLKTPSKRPLKLPTL LAKA+AAEWEYQETDGI                 
Sbjct: 121 NGWTVMLDYRTLKTPSKRPLKLPTLALAKAIAAEWEYQETDGI----------------- 180

Query: 181 VPLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNFH 240
            P T P +++H           C A +   LT                + I++ +     
Sbjct: 181 RPFTMP-LMKHA----------CTALERVPLTR--------------PKVIDYLMKKFNQ 240

Query: 241 SLVRQTADQQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIKA 300
            LV   A   N I   S + +RQVEK+DPLL+WV+ EFGFKP VYSSFFGGKQEDGL +A
Sbjct: 241 DLVFCRAPNDNDI--TSVVHDRQVEKMDPLLEWVKSEFGFKPAVYSSFFGGKQEDGLTRA 300

Query: 301 VEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGLV 360
           +E LL +TDDCELA+IDAIAS+AHSL+IAI IFRGKLQIEEAIELIRLEED+QVD+WGLV
Sbjct: 301 IETLLIQTDDCELAAIDAIASSAHSLIIAIGIFRGKLQIEEAIELIRLEEDIQVDRWGLV 338

Query: 361 EGGHDVDIADLRVQISSAAVFLALSRR 378
           EGGHDVD ADLRVQISSAAVFL LSRR
Sbjct: 361 EGGHDVDAADLRVQISSAAVFLGLSRR 338

[Close]

BLAST of Cp4.1LG03g07180 vs. NCBI nr
Match: gi|743903757|ref|XP_011045235.1| (PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 [Populus euphratica])

HSP 1 Score: 350.1 bits (897), Expect = 4.7e-93
Identity = 214/388 (55.15%), Postives = 257/388 (66.24%), Query Frame = 1


Query: 1   MASSILAKMAKSIRIANPTLIPSHSFRWRTLT---TSVATAAEQSQADAASFTF------ 60
           MA+S++ K   SI+  NP L+       R LT   TS+AT   QS+  ++SFT+      
Sbjct: 1   MATSLITKTLNSIK--NPKLL-------RPLTRQFTSIATV--QSENPSSSFTYADSDSN 60

Query: 61  SEDSTREDPIFVKA--PNTKSGADSSSYSSSSVTMPTSFMTGSVVGKRFYKQVTTREADD 120
           S  S  +  I+++   PN     +  S   SSVTMP S MTGS+VG+RFYKQVTTREADD
Sbjct: 61  SSSSCNDSNIYMRKGPPNCNVRGEKDS---SSVTMPMSSMTGSIVGRRFYKQVTTREADD 120

Query: 121 RNGWTVMLDYRTLKTPSKRPLKLPTLGLAKAVAAEWEYQETDGIRPFSMPLMKLACTALE 180
            NGW VMLDYRTLKTPSKRPLKLPTL LAKA+AAEW+YQ+TDGIRPF+MPLMKL      
Sbjct: 121 GNGWNVMLDYRTLKTPSKRPLKLPTLALAKAIAAEWDYQQTDGIRPFTMPLMKL------ 180

Query: 181 RVPLTRPKIIEHLVQKFNQDLVFCRAPDDNVLTSGVYGMSSNPMSPNFTRCIEHEIYLNF 240
                                  C A D   LT         PM       IEH +    
Sbjct: 181 ----------------------ACTALDRVPLT--------RPM------IIEHLMKKFS 240

Query: 241 HSLVRQTADQQNMIYRLSGLLERQVEKIDPLLDWVRLEFGFKPIVYSSFFGGKQEDGLIK 300
             LV   A + N++   SG+ ERQVEK DPL+DW++ EFGFKP+V+S  FGGKQE+GL+K
Sbjct: 241 QDLVFCRAPEDNVL--TSGVYERQVEKFDPLIDWIKSEFGFKPVVHSCLFGGKQEEGLVK 300

Query: 301 AVEDLLRKTDDCELASIDAIASAAHSLVIAIAIFRGKLQIEEAIELIRLEEDLQVDKWGL 360
           A+E+LL++TDD +LA IDAIASAAHSL+IA+ I +GKL IEEAIELIRLEED QVD WGL
Sbjct: 301 AIENLLKQTDDYQLAVIDAIASAAHSLIIAVGIVKGKLDIEEAIELIRLEEDFQVDTWGL 330

Query: 361 VEGGHDVDIADLRVQISSAAVFLALSRR 378
           VEGGHD+DIADLRVQISSAAVFL LSR+
Sbjct: 361 VEGGHDIDIADLRVQISSAAVFLGLSRK 330

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g07180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATPF2_HUMAN	2.9e-10	26.43	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Homo sapiens GN=ATPAF...	[more]
ATPF2_MOUSE	3.2e-09	25.00	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Mus musculus GN=Atpaf...	[more]
ATPF2_BOVIN	1.2e-08	26.43	ATP synthase mitochondrial F1 complex assembly factor 2 OS=Bos taurus GN=ATPAF2 ...	[more]
ATP12_YEAST	1.2e-06	20.97	Protein ATP12, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...	[more]
ATP12_SCHPO	3.4e-06	27.91	Protein atp12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cp4.1LG03g07180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8R2_CUCSA	6.8e-107	62.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595240 PE=4 SV=1	[more]
E5GCD8_CUCME	7.6e-106	61.64	ATP12-like protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A9PI48_POPTR	1.3e-89	54.36	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s36070g PE=2 SV=1	[more]
A0A067LGA4_JATCU	9.6e-85	53.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10198 PE=4 SV=1	[more]
B9SLS3_RICCO	2.0e-82	51.55	ATP synthase mitochondrial F1 complex assembly factor 2, mitochondrial, putative...	[more]

BLAST of Cp4.1LG03g07180 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G40660.1	8.1e-75	48.70	ATP12 protein-related	[more]

BLAST of Cp4.1LG03g07180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455898\|ref\|XP_004145687.1\|	9.8e-107	62.33	PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 [Cucumis sati...	[more]
gi\|659098220\|ref\|XP_008450034.1\|	1.1e-105	61.64	PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 isoform X1 [C...	[more]
gi\|658025204\|ref\|XP_008348009.1\|	1.1e-97	57.62	PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2-like [Malus d...	[more]
gi\|694426339\|ref\|XP_009340852.1\|	1.0e-95	57.11	PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2-like [Pyrus x...	[more]
gi\|743903757\|ref\|XP_011045235.1\|	4.7e-93	55.15	PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 [Populus euph...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0043461	proton-transporting ATP synthase complex assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR023335	ATP12_ortho_dom_sf
IPR011419	ATP12_ATP_synth-F1-assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043461	proton-transporting ATP synthase complex assembly
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g07180.1	Cp4.1LG03g07180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011419	ATP12, ATPase F1F0-assembly protein	PANTHER	PTHR21013	ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR	coord: 249..375 score: 5.1E-102coord: 77..200 score: 5.1E
IPR011419	ATP12, ATPase F1F0-assembly protein	PFAM	PF07542	ATP12	coord: 96..264 score: 4.2
IPR023335	Orthogonal Bundle domain in ATP12	GENE3D	G3DSA:1.10.3580.10		coord: 158..199 score: 1.1E-48coord: 248..374 score: 1.1
None	No IPR available	GENE3D	G3DSA:3.30.2180.10		coord: 74..155 score: 4.4
None	No IPR available	unknown	SSF160909	ATP12-like	coord: 247..373 score: 1.44E-67coord: 83..198 score: 1.44

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g07180	Cucsa.156210	Cucumber (Gy14) v1	cgycpeB0415
Cp4.1LG03g07180	CmaCh14G006850	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g07180	CmoCh14G007020	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g07180	Csa3G595240	Cucumber (Chinese Long) v2	cpecuB610
Cp4.1LG03g07180	MELO3C014823	Melon (DHL92) v3.5.1	cpemeB582
Cp4.1LG03g07180	ClCG05G013000	Watermelon (Charleston Gray)	cpewcgB555
Cp4.1LG03g07180	CSPI03G26020	Wild cucumber (PI 183967)	cpecpiB612
Cp4.1LG03g07180	Lsi05G004730	Bottle gourd (USVL1VR-Ls)	cpelsiB509
Cp4.1LG03g07180	MELO3C014823.2	Melon (DHL92) v3.6.1	cpemedB695
Cp4.1LG03g07180	CsaV3_3G027540	Cucumber (Chinese Long) v3	cpecucB0760
Cp4.1LG03g07180	Bhi01G001556	Wax gourd	cpewgoB0772
Cp4.1LG03g07180	CsGy3G024370	Cucumber (Gy14) v2	cgybcpeB407
Cp4.1LG03g07180	Carg09693	Silver-seed gourd	carcpeB0613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g07180	Silver-seed gourd	carcpeB0518
Cp4.1LG03g07180	Silver-seed gourd	carcpeB0967
Cp4.1LG03g07180	Cucumber (Chinese Long) v3	cpecucB0739
Cp4.1LG03g07180	Cucumber (Chinese Long) v3	cpecucB0776
Cp4.1LG03g07180	Wax gourd	cpewgoB0769
Cp4.1LG03g07180	Cucurbita pepo (Zucchini)	cpecpeB358
Cp4.1LG03g07180	Cucurbita pepo (Zucchini)	cpecpeB396
Cp4.1LG03g07180	Cucurbita pepo (Zucchini)	cpecpeB477
Cp4.1LG03g07180	Cucumber (Gy14) v1	cgycpeB0525
Cp4.1LG03g07180	Cucurbita maxima (Rimu)	cmacpeB145
Cp4.1LG03g07180	Cucurbita moschata (Rifu)	cmocpeB124
Cp4.1LG03g07180	Cucurbita moschata (Rifu)	cmocpeB125
Cp4.1LG03g07180	Wild cucumber (PI 183967)	cpecpiB626
Cp4.1LG03g07180	Cucumber (Chinese Long) v2	cpecuB623
Cp4.1LG03g07180	Bottle gourd (USVL1VR-Ls)	cpelsiB495
Cp4.1LG03g07180	Watermelon (Charleston Gray)	cpewcgB538
Cp4.1LG03g07180	Watermelon (Charleston Gray)	cpewcgB563
Cp4.1LG03g07180	Watermelon (97103) v1	cpewmB591
Cp4.1LG03g07180	Melon (DHL92) v3.5.1	cpemeB550
Cp4.1LG03g07180	Melon (DHL92) v3.5.1	cpemeB564
Cp4.1LG03g07180	Cucumber (Gy14) v2	cgybcpeB106
Cp4.1LG03g07180	Cucumber (Gy14) v2	cgybcpeB676
Cp4.1LG03g07180	Melon (DHL92) v3.6.1	cpemedB669