Cp4.1LG03g03810 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g03810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Outer envelope pore 16-3, chloroplastic/mitochondrial-like protein
Location	Cp4.1LG03 : 2054420 .. 2058907 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATCTAAACGCATGTATTTGGCTTAGGTTTCGAATTGTTCGTTATCTAGCGGGTTATTGGTTCGAATTGACGATGTAGATTGCCCTACTCTTTTTGCAGTTCCATTAGGATGTTTGCATCTAGCTGCTCGTTCTTCACAGGAAGTTAGAAATTCCTGATTTTTTTTTTTTTAATGCACGTCTTTTTCTGCTGAGAAAACGTAAAGGAATGGGATACATACATGTTTCGTTATTATTTCACCTAATTAATTTTCCGCTTAAGTGAATGATTTCACAAAAAAAAAAAAAAAAAAAAAAAAGTTTCTTTCGACGTGGTTTTTGAGACCTGAGTCTTGCATCTTTTCTTTCTGCAGCTTTGGTCATTGCCAGTAACTTGAAAAAAAAAAAAACCCATGGATGCTTCAGAGCGTAGGTACTTGGAGGATGATGATACGTCAATAATGAAAACGATCAAAGGTGCTACTACAGGATTTGTTTCAGGGACCATTTTTGGGACAATTGCTGCCACTTGGTATGATGTGCCCCGTGTTGAGAGAAATGTTGCTCTGCCCGGGCTTGTGAGAACCTTGAAAATGATGGGAAACTATGGGATGACATTTGCTGCTATTGGAGGGGTATACATTGGCGTTGAGCAGCTTGTCCAGAATTATAGAATGAAAAGAGACTTCGTTAATGGAGCTATAGGTGGTTTTGCAGCTGGAGCATCTGTTCTCGGATATAAAGGTGAAACTTTGTACTCTTTCTAGTTCTTGATACGGTCGCAGTTTGAATTCTTAAATTAGCAAACGTGAACAAAGTTCTGTTAACATGTTTTATAAGTGTTGTTTCTCCTTTTCTCTGCTTGCCTGTCATAGAGGATGGAATGAAGTTTTATTTTATGAATGTGGAGAGTTTTTTTTCTTTTCTCCTAACTGAAGTTTATGTGGCATGTTTTCATCTGTTGATATTTAAATGCTAACTCCAAAAAAGTTAACACCATTTATCATTAATTTAATGCACTCATTATTGTGTTCCGTCTAACCTTTTTGGTTTTCTTACTCTCAACCTTTTTATGAAAAGTGGAACTGGTGCACTGGATGGGGATTGTAAGTATGTTATTTAAGCTCGGGTTACTGTAGGTTACAGTAGGCATATGCTTCAGCAGAAGCGCCCTCCTACTGTGATTTTTGCATCCATCTGGTGTTCTCTCTCTAAGTATTTTTGTGACTATTATGGTGTGCATATTTCAGCTAATTTGGAGTCTTTTTTTTTTAACACTTTGGTCTAGCATGACTTTCTTGCTATTGATATATTCTTTGTTTCTTGTAAAAAACAAAGAGAAAAATTATGAAAGATTACTGTTATTCTGAAGTTCAATACTGGCATGGTTACGGACTAAGCAAATGGAAGTAGCACTATTGCATAACTGTGTGAAACTGATACAGAGTACTCTAGACTTTAAGAGGCCTGGAACCCCCCCTCCCGATTCCAAAGCAAAACTAATGTACCTTTATTTTAAGGAATTTTTTTTACAATATAGAAACAACAAGTTTTCTTTATTATTATTATTGTTTAGTATGCCTCACTACTTTAAGTGAGAAAGGTCATGTGTTGTGGTAAGCAAGATTTCTTGCTATTGTTTGGGGTATTTGACTAGAGAGGAACACTAGAATTTTTAGGAAGGTTGGGAGTTCGAATGAGGAGGTCTTGGAGGGGGCTCAATTTAATGCCTCCCCATGGGCGTTTATTAATAACCTCTTTTGTGATTATGATCTTGATTCGATTTTATTAGATTAGAGACATTTTTTAGTTGGTTTGAGGTTCCCTTCACTTTTTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATTCATCTTTTCTATCATTATTTCACAATGAAACTTTGGTTTCTTAAAAAAAGAAAAGTTTTAAGTATATGTTGCCTTGCATAATGTCAACAAGTCAAAATGCTCATGTGGAAGGATTGCAACTAATTGATTCTATCCATGCTCAGACTGAAGGAATGTAAGATTATATAAATTAGAAAAAGTGGGAATGGATACTTAAGTCTACTTTGAGAAAGCCATATAGTTGATTAGGAATTTTTGCTAATGGCGTTTAAAAGCAAAGGCCTGGGCATGAGATGGATAAAATGGACTAACAAATTCTTGGATCGTGTGATTGCAAACACTAGCTCCCGTTAATGGAATAAAACTCTGTTATTTTTCTTAATGGTAGACTAAGAGGGCTGTTGAGGGCTACATTTAAAAGGACAGATTTTTTTGTCATTTTGTTTCTTTCTTGATTGGAAATGTGTTGAGTAGTTTGATTGAACATGGTATTTGTGGGGTTTTCTTGAACATTTTTATTCCTTGAGGAGAACCAGGAGCATTTTCACATATTCATTTTATGGAGAGTAATTTACTTATATGCAAAGATGATAGGAAAGTGTTAGAGCATTTACTTAAGGTACATTGGATTTTTTATATTTCTTTGAACCTAAAAATAAATGCGAAAACTTCAGGTTTGTGGTCTAGAATATTCCTTTTGCTGAAGTGAGGGCTTCTGCAAAGAAAATGGTGTTTGACCTTGTAACATGTCAATTTCTTACTCGGGGATGCCTGTGCATGATAAATTCATAAGGCTAGAGTTTCGGAAGCCCATGGAAGAAGATGAAGTCCTTTATAAGTTTGAAAAATGGAAGTCTTACCTTTCTAACGGGGGAGATTGGCTCTTTGACAAGCAGGTCTTCCCACCTTACCTACCTATTTCATGTCATATTTTCCTGTGTTTAGGTAAATAAAAGTGGTAAGTTTGGAAAAAATGTTGAGGAATTTTTGTATGGCTGATAGATAATTCAGACAGGAACCTAAGCCATCTTGTACACTGGAATGTGTTGTCTTTGCCTATTGATTGTGGTGGGCTGGGGCTACTTGAGAAAGAAAAAATAGTACTGGTCGCAATGGGTATGGCACTTTTTCAGTGAATCAAATCAAATTTGGCATGAAGTGGTATCTAGCATTTATAGAAGAAAGGAAGGCGAGTGTTTACCTATTTAGACTTCATTGTCCACGATATCTAAAAATGGATAAACCATTCAACCTGCATACCTCTAGCCGGTAGCCCAATTCAGAATAACTTAGATCACAGTAAAAGTTCAACATTGAACGCCTATTAGAATCATTCCATAATTGCTAGCAAGCATAGAGTCTAGTAGATAAAAGGAGAGAGTAGTCTTGTCCAGATGTCATTCCAAAATTTAACTCTACTGCCTTCTCCCACCTAAAACATGCAACCAAAGGCTGCAGTATCCAAAATATATCTAAGCTTGGAAATATGCAAGCAACTGCTGCAGGACATTTCTGCACCTGGTGATACACCTGACTTATCCTTCCCATACCTACCATGGTGCATTACTTTCTAAAAGGAACCACAATATGCATTTGGTTAAAAATGTGTCATTTCACTTAGCTATATTTATGACGCCAAGACCTCTGTGTTCCAAAGAGCGAGAGACCTCTGTGTACTTTATTAATAGGCAGCCTCCATCCTAGTCTGCACCTCCCTAAAGAATTCTCCTCTCCTATGTTTATCAAAGTTTCTACCTTAAAGACAAATAATTAGTCTGCATCTTAGTAACAACCTCTTAGGCAGGACAGAGGCTTAAGTTTGGACTTGGACTGCAAAAGTTTGCATTCCAACTAAATTAAATGGCGCAAATTGGAGGGAAGTGCTATTTAATACACACACACACAAACACACACAAAATCTAAGACAAAGGAGGGAGGGAGAGAATTTCAAACACTCTTGTAATACCTACTTTCTCCGCTAAAGCTATGACCTTTTCTTCATAATTGTTTTTAATAATTCTAGACCTCATGTCACTCTGAATTAATCCCTACTTGGCTGAATGAATGAAAGTCATATCCACACTATGTAGTACTCGAAATTGTCTCACAAGAGGTGGCAATTGCCTGATATGGGTATAGCTTGATTGTTATATTTGTCACAATAATCCCTATCAGCACATTTTTGTAAAGTGAAGTGTCATTCTCATCTTTCTGATCCGTTGCTTTAGGATGTGTTCCTAATCTGTTTTCTTTTCATGTCCCTAATAAGTAAACTTGGTCTGAAAGTGGTTAACTGTTTCTATTGTTTTCTTTCAGGAAAAAGTATTCCAACAGCCATTTCTGCTGGAGCTGCTTTGGCAGTTACTTCTGCACTAATTGATGTTGGTGGTCAGACCACAAGAATTGACAATGGCAAGGAGTACTACCCTTACACCACCAAGAAGAGATCCCACATCGAGTAGCATTACTAATATTTGCAGCAATTGGTTGGCTTTCTCTTTTGGTTTTCCAGAGATGTAATTATACTCTCAGTTCTCTTGAGCGAGCTTAACAGCGATGGTTGTATGAATAAAAAGGTACTCTCAATTTGTTCAACTTGTTTTTATGGTTAGTTTCGGATTTATCACCATTAATATGT

mRNA sequence

TTGATCTAAACGCATGTATTTGGCTTAGGTTTCGAATTGTTCGTTATCTAGCGGGTTATTGGTTCGAATTGACGATGTAGATTGCCCTACTCTTTTTGCAGTTCCATTAGGATGTTTGCATCTAGCTGCTCGTTCTTCACAGGAAGTTAGAAATTCCTGATTTTTTTTTTTTTAATGCACGTCTTTTTCTGCTGAGAAAACGTAAAGGAATGGGATACATACATGTTTCGTTATTATTTCACCTAATTAATTTTCCGCTTAAGTGAATGATTTCACAAAAAAAAAAAAAAAAAAAAAAAAGTTTCTTTCGACGTGGTTTTTGAGACCTGAGTCTTGCATCTTTTCTTTCTGCAGCTTTGGTCATTGCCAGTAACTTGAAAAAAAAAAAAACCCATGGATGCTTCAGAGCGTAGGTACTTGGAGGATGATGATACGTCAATAATGAAAACGATCAAAGGTGCTACTACAGGATTTGTTTCAGGGACCATTTTTGGGACAATTGCTGCCACTTGGTATGATGTGCCCCGTGTTGAGAGAAATGTTGCTCTGCCCGGGCTTGTGAGAACCTTGAAAATGATGGGAAACTATGGGATGACATTTGCTGCTATTGGAGGGGTATACATTGGCGTTGAGCAGCTTGTCCAGAATTATAGAATGAAAAGAGACTTCGTTAATGGAGCTATAGGTGGTTTTGCAGCTGGAGCATCTGTTCTCGGATATAAAGGAAAAAGTATTCCAACAGCCATTTCTGCTGGAGCTGCTTTGGCAGTTACTTCTGCACTAATTGATGTTGGTGGTCAGACCACAAGAATTGACAATGGCAAGGAGTACTACCCTTACACCACCAAGAAGAGATCCCACATCGAGTAGCATTACTAATATTTGCAGCAATTGGTTGGCTTTCTCTTTTGGTTTTCCAGAGATGTAATTATACTCTCAGTTCTCTTGAGCGAGCTTAACAGCGATGGTTGTATGAATAAAAAGGTACTCTCAATTTGTTCAACTTGTTTTTATGGTTAGTTTCGGATTTATCACCATTAATATGT

Coding sequence (CDS)

ATGGATGCTTCAGAGCGTAGGTACTTGGAGGATGATGATACGTCAATAATGAAAACGATCAAAGGTGCTACTACAGGATTTGTTTCAGGGACCATTTTTGGGACAATTGCTGCCACTTGGTATGATGTGCCCCGTGTTGAGAGAAATGTTGCTCTGCCCGGGCTTGTGAGAACCTTGAAAATGATGGGAAACTATGGGATGACATTTGCTGCTATTGGAGGGGTATACATTGGCGTTGAGCAGCTTGTCCAGAATTATAGAATGAAAAGAGACTTCGTTAATGGAGCTATAGGTGGTTTTGCAGCTGGAGCATCTGTTCTCGGATATAAAGGAAAAAGTATTCCAACAGCCATTTCTGCTGGAGCTGCTTTGGCAGTTACTTCTGCACTAATTGATGTTGGTGGTCAGACCACAAGAATTGACAATGGCAAGGAGTACTACCCTTACACCACCAAGAAGAGATCCCACATCGAGTAG

Protein sequence

MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLKMMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISAGAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE

Homology

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BLAST of Cp4.1LG03g03810 vs. Swiss-Prot
Match: OP163_ARATH (Outer envelope pore protein 16-3, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=OEP163 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-65
Identity = 121/158 (76.58%), Postives = 140/158 (88.61%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           MD +E RYLE++D  +MKTIKG+ TGF +GTI+GTI ATW DVPRVERNVALPGL+RTLK
Sbjct: 1   MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 60

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMG +G+TFAAIGGVYIGVEQLVQN+R KRDF NGAIGGF AGASVLGY+ +SIPTAI+A
Sbjct: 61  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYRARSIPTAIAA 120

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE 159
           GA LAVTSALID GGQTTR+DNG+EYYPYT +KR+  +
Sbjct: 121 GATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEAD 158

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BLAST of Cp4.1LG03g03810 vs. TrEMBL
Match: A0A0A0LBC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809960 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-75
Identity = 143/158 (90.51%), Postives = 152/158 (96.20%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           MDASERRYLEDDDTS+MKTIKGAT GFVSGTIFGTI ATW+DVPRVERNVALPGLVRTLK
Sbjct: 1   MDASERRYLEDDDTSLMKTIKGATMGFVSGTIFGTIVATWHDVPRVERNVALPGLVRTLK 60

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           +MGNYGMTFAAIGGVYIGVEQL+QNYRMKRDFVNGA+GGF AGASVLGYKGKSI TA+SA
Sbjct: 61  IMGNYGMTFAAIGGVYIGVEQLLQNYRMKRDFVNGAVGGFTAGASVLGYKGKSISTALSA 120

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE 159
           GAALA TS++ID+GGQTTRID GKEYYPYTTKKRSHIE
Sbjct: 121 GAALAFTSSVIDIGGQTTRIDTGKEYYPYTTKKRSHIE 158

[Close]

BLAST of Cp4.1LG03g03810 vs. TrEMBL
Match: M5VRA9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012593mg PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 7.4e-71
Identity = 132/155 (85.16%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           +D +ERRYLED+D+  MKTIKGAT GFV+GTIFGTI ATWYDVPRVER+VALPGL+RTLK
Sbjct: 4   LDPAERRYLEDEDSPTMKTIKGATNGFVTGTIFGTIVATWYDVPRVERSVALPGLIRTLK 63

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMGNYG+TFAAIGGVYIGVEQ+VQNYRMKRDF+NGA+GGF AG+++LGYKGKSI TAISA
Sbjct: 64  MMGNYGITFAAIGGVYIGVEQIVQNYRMKRDFINGAVGGFVAGSTILGYKGKSISTAISA 123

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRS 156
           GAALAVTS+LID GGQTTRIDNGKEYYPYTTKKRS
Sbjct: 124 GAALAVTSSLIDAGGQTTRIDNGKEYYPYTTKKRS 158

[Close]

BLAST of Cp4.1LG03g03810 vs. TrEMBL
Match: V4T0M9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012973mg PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.2e-70
Identity = 135/155 (87.10%), Postives = 144/155 (92.90%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           MD SE RYLED+DT +MKTIKGAT G VSGTIFGT+ ATW DVPRVER VALPGL+RTLK
Sbjct: 1   MDPSELRYLEDEDTPMMKTIKGATFGLVSGTIFGTVVATWQDVPRVERRVALPGLIRTLK 60

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMGNYGMTFAAIGGVYIGVEQLVQ+YRMKRDFVNGA+GGF AGA+VLGYKGKSI +AISA
Sbjct: 61  MMGNYGMTFAAIGGVYIGVEQLVQHYRMKRDFVNGAVGGFVAGATVLGYKGKSISSAISA 120

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRS 156
           GAALAVTS+LID GGQTTRIDNGKEYYPYTTKKRS
Sbjct: 121 GAALAVTSSLIDAGGQTTRIDNGKEYYPYTTKKRS 155

[Close]

BLAST of Cp4.1LG03g03810 vs. TrEMBL
Match: A0A067EH04_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031437mg PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.2e-70
Identity = 135/155 (87.10%), Postives = 144/155 (92.90%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           MD SE RYLED+DT +MKTIKGAT G VSGTIFGT+ ATW DVPRVER VALPGL+RTLK
Sbjct: 1   MDPSELRYLEDEDTPMMKTIKGATFGLVSGTIFGTVVATWQDVPRVERRVALPGLIRTLK 60

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMGNYGMTFAAIGGVYIGVEQLVQ+YRMKRDFVNGA+GGF AGA+VLGYKGKSI +AISA
Sbjct: 61  MMGNYGMTFAAIGGVYIGVEQLVQHYRMKRDFVNGAVGGFVAGATVLGYKGKSISSAISA 120

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRS 156
           GAALAVTS+LID GGQTTRIDNGKEYYPYTTKKRS
Sbjct: 121 GAALAVTSSLIDAGGQTTRIDNGKEYYPYTTKKRS 155

[Close]

BLAST of Cp4.1LG03g03810 vs. TrEMBL
Match: W9SWA5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_028046 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 8.1e-70
Identity = 129/158 (81.65%), Postives = 147/158 (93.04%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           +D +ERRYLED+DT +MKTIKGAT G VSGTIFGT+ ATWYDVPRVER+VALPGL+RTLK
Sbjct: 2   VDPAERRYLEDEDTPVMKTIKGATMGLVSGTIFGTVVATWYDVPRVERSVALPGLIRTLK 61

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMGNYG+TFAAIGGVY+GVEQLVQ+YRMKRDF+NGA+GGF AG+++LGYKG+S+ TAISA
Sbjct: 62  MMGNYGLTFAAIGGVYVGVEQLVQHYRMKRDFINGAVGGFVAGSTILGYKGRSLSTAISA 121

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE 159
           GAALAVTSA+ID GGQTTRID GKEYYPYTTKKRS  E
Sbjct: 122 GAALAVTSAVIDAGGQTTRIDTGKEYYPYTTKKRSSAE 159

[Close]

BLAST of Cp4.1LG03g03810 vs. TAIR10
Match: AT2G42210.2 (AT2G42210.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 249.6 bits (636), Expect = 1.3e-66
Identity = 121/158 (76.58%), Postives = 140/158 (88.61%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           MD +E RYLE++D  +MKTIKG+ TGF +GTI+GTI ATW DVPRVERNVALPGL+RTLK
Sbjct: 15  MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 74

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMG +G+TFAAIGGVYIGVEQLVQN+R KRDF NGAIGGF AGASVLGY+ +SIPTAI+A
Sbjct: 75  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYRARSIPTAIAA 134

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE 159
           GA LAVTSALID GGQTTR+DNG+EYYPYT +KR+  +
Sbjct: 135 GATLAVTSALIDSGGQTTRVDNGREYYPYTVEKRAEAD 172

[Close]

BLAST of Cp4.1LG03g03810 vs. NCBI nr
Match: gi|659084796|ref|XP_008443078.1| (PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 2.6e-77
Identity = 147/158 (93.04%), Postives = 153/158 (96.84%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           MDASERRYLEDDDTS+MKTIKGAT GFVSGTIFGTI ATWYDVPRVERNVALPGLVRTLK
Sbjct: 1   MDASERRYLEDDDTSLMKTIKGATMGFVSGTIFGTIVATWYDVPRVERNVALPGLVRTLK 60

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           +MGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGA+GGFAAGASVLGYKGKSI TA+SA
Sbjct: 61  LMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAVGGFAAGASVLGYKGKSISTALSA 120

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE 159
           GAALA TSA+ID+GGQTTRID GKEYYPYTTKKRSHIE
Sbjct: 121 GAALAFTSAVIDIGGQTTRIDTGKEYYPYTTKKRSHIE 158

[Close]

BLAST of Cp4.1LG03g03810 vs. NCBI nr
Match: gi|449437597|ref|XP_004136578.1| (PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-75
Identity = 143/158 (90.51%), Postives = 152/158 (96.20%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           MDASERRYLEDDDTS+MKTIKGAT GFVSGTIFGTI ATW+DVPRVERNVALPGLVRTLK
Sbjct: 1   MDASERRYLEDDDTSLMKTIKGATMGFVSGTIFGTIVATWHDVPRVERNVALPGLVRTLK 60

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           +MGNYGMTFAAIGGVYIGVEQL+QNYRMKRDFVNGA+GGF AGASVLGYKGKSI TA+SA
Sbjct: 61  IMGNYGMTFAAIGGVYIGVEQLLQNYRMKRDFVNGAVGGFTAGASVLGYKGKSISTALSA 120

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE 159
           GAALA TS++ID+GGQTTRID GKEYYPYTTKKRSHIE
Sbjct: 121 GAALAFTSSVIDIGGQTTRIDTGKEYYPYTTKKRSHIE 158

[Close]

BLAST of Cp4.1LG03g03810 vs. NCBI nr
Match: gi|658001057|ref|XP_008392994.1| (PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial-like [Malus domestica])

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-71
Identity = 132/155 (85.16%), Postives = 148/155 (95.48%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           +D +ERRYLED+DT +MKT+KGAT GFV+GTIFGTI ATWYDVPRVERNVALPGL+RTL+
Sbjct: 4   LDPAERRYLEDEDTPLMKTLKGATNGFVTGTIFGTIVATWYDVPRVERNVALPGLIRTLR 63

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMGNYG+TFAAIGGVYIGVEQLVQNYRMKRDF+NGA+GGF AG+++LGY+GKSI TAISA
Sbjct: 64  MMGNYGVTFAAIGGVYIGVEQLVQNYRMKRDFINGAVGGFVAGSTILGYRGKSISTAISA 123

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRS 156
           GAALAVTS+LID GGQTTRIDNGKEYYPYTTKKRS
Sbjct: 124 GAALAVTSSLIDAGGQTTRIDNGKEYYPYTTKKRS 158

[Close]

BLAST of Cp4.1LG03g03810 vs. NCBI nr
Match: gi|658062908|ref|XP_008367365.1| (PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial-like [Malus domestica])

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-71
Identity = 133/155 (85.81%), Postives = 148/155 (95.48%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           +D +ERRYLED+DT ++KT+KGAT GFV+GTIFGTI ATWYDVPRVERNVALPGL+RTL+
Sbjct: 4   LDPAERRYLEDEDTPLVKTLKGATNGFVTGTIFGTIVATWYDVPRVERNVALPGLIRTLR 63

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMGNYG+TFAAIGGVYIGVEQLVQNYRMKRDF+NGA+GGF AG++VLGY+GKSI TAISA
Sbjct: 64  MMGNYGVTFAAIGGVYIGVEQLVQNYRMKRDFINGAVGGFVAGSTVLGYRGKSISTAISA 123

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRS 156
           GAALAVTSALID GGQTTRIDNGKEYYPYTTKKRS
Sbjct: 124 GAALAVTSALIDAGGQTTRIDNGKEYYPYTTKKRS 158

[Close]

BLAST of Cp4.1LG03g03810 vs. NCBI nr
Match: gi|694314136|ref|XP_009369818.1| (PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-70
Identity = 131/155 (84.52%), Postives = 147/155 (94.84%), Query Frame = 1


Query: 1   MDASERRYLEDDDTSIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLK 60
           +D +ERRYLED+DT +MKT+KGAT GFV+GTIFGTI ATWYDVPRVERNVALPGL+RTL+
Sbjct: 4   LDPAERRYLEDEDTPLMKTLKGATNGFVTGTIFGTIVATWYDVPRVERNVALPGLIRTLR 63

Query: 61  MMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKGKSIPTAISA 120
           MMGNYG+TFAAIGGVYIGVEQLVQNYRMK DF+NGA+GGF AG+++LGY+GKSI TAISA
Sbjct: 64  MMGNYGVTFAAIGGVYIGVEQLVQNYRMKTDFINGAVGGFVAGSTILGYRGKSISTAISA 123

Query: 121 GAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRS 156
           GAALAVTS+LID GGQTTRIDNGKEYYPYTTKKRS
Sbjct: 124 GAALAVTSSLIDAGGQTTRIDNGKEYYPYTTKKRS 158

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g03810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OP163_ARATH	2.3e-65	76.58	Outer envelope pore protein 16-3, chloroplastic/mitochondrial OS=Arabidopsis tha...	[more]

BLAST of Cp4.1LG03g03810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBC6_CUCSA	1.3e-75	90.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G809960 PE=4 SV=1	[more]
M5VRA9_PRUPE	7.4e-71	85.16	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012593mg PE=4 SV=1	[more]
V4T0M9_9ROSI	6.2e-70	87.10	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012973mg PE=4 SV=1	[more]
A0A067EH04_CITSI	6.2e-70	87.10	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031437mg PE=4 SV=1	[more]
W9SWA5_9ROSA	8.1e-70	81.65	Uncharacterized protein OS=Morus notabilis GN=L484_028046 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g03810 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42210.2	1.3e-66	76.58	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/...	[more]

BLAST of Cp4.1LG03g03810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084796\|ref\|XP_008443078.1\|	2.6e-77	93.04	PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Cucumi...	[more]
gi\|449437597\|ref\|XP_004136578.1\|	1.9e-75	90.51	PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Cucumi...	[more]
gi\|658001057\|ref\|XP_008392994.1\|	2.1e-71	85.16	PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial-like [M...	[more]
gi\|658062908\|ref\|XP_008367365.1\|	2.1e-71	85.81	PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial-like [M...	[more]
gi\|694314136\|ref\|XP_009369818.1\|	1.1e-70	84.52	PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial-like [P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0045039	protein import into mitochondrial inner membrane
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0006544	glycine metabolic process
cellular_component	GO:0042721	mitochondrial inner membrane protein insertion complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004609	phosphatidylserine decarboxylase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g03810.1	Cp4.1LG03g03810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	PFAM	PF02466	Tim17	coord: 18..127 score: 3.9
None	No IPR available	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 1..158 score: 4.7E
None	No IPR available	PANTHER	PTHR14110:SF4	OUTER ENVELOPE PORE PROTEIN 16-3, CHLOROPLASTIC/MITOCHONDRIAL	coord: 1..158 score: 4.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g03810	Cucsa.242840	Cucumber (Gy14) v1	cgycpeB0644
Cp4.1LG03g03810	CmaCh14G004330	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g03810	CmoCh06G000800	Cucurbita moschata (Rifu)	cmocpeB788
Cp4.1LG03g03810	Cla017524	Watermelon (97103) v1	cpewmB597
Cp4.1LG03g03810	Csa3G809960	Cucumber (Chinese Long) v2	cpecuB597
Cp4.1LG03g03810	MELO3C009644	Melon (DHL92) v3.5.1	cpemeB571
Cp4.1LG03g03810	ClCG10G017380	Watermelon (Charleston Gray)	cpewcgB546
Cp4.1LG03g03810	CSPI03G36650	Wild cucumber (PI 183967)	cpecpiB599
Cp4.1LG03g03810	Lsi03G017200	Bottle gourd (USVL1VR-Ls)	cpelsiB503
Cp4.1LG03g03810	MELO3C009644.2	Melon (DHL92) v3.6.1	cpemedB678
Cp4.1LG03g03810	CsaV3_3G039010	Cucumber (Chinese Long) v3	cpecucB0747
Cp4.1LG03g03810	Bhi11G002210	Wax gourd	cpewgoB0746
Cp4.1LG03g03810	CsGy3G034110	Cucumber (Gy14) v2	cgybcpeB395
Cp4.1LG03g03810	Carg03557	Silver-seed gourd	carcpeB0353
Cp4.1LG03g03810	Carg01235	Silver-seed gourd	carcpeB0229

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g03810	Cp4.1LG08g13930	Cucurbita pepo (Zucchini)	cpecpeB489

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g03810	Cucurbita pepo (Zucchini)	cpecpeB484
Cp4.1LG03g03810	Cucurbita maxima (Rimu)	cmacpeB838
Cp4.1LG03g03810	Cucurbita moschata (Rifu)	cmocpeB245