Cp4.1LG03g02140 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAAGCATGTTTCCGTTCGGCTACGACTTCGCTCCCACAGATGAAGAACTATTGATCTATTATTTGTTTCACAAGATTGTTGGAGACATTGTTCCGTCAATTTCGTTGCCTGTGATCGATATTTACTCCCATGAACCTGCTATGATATGGCAACAATGCGGAGGAATGGAGGATAAAGACATCTACTTTTTCACGACCCTAAAAAAGAAGAAATCTCGTATCATCAGGAAGGTCGGTATTAATGGTGGCACTTGGAGTGGGGAGAGCAAAGGTCATAAAGTATTTTCTTCCGCTAACAATGCTCCCATTGGTACTATTAAACGTTTCCATTATGAGACTTCTGGAGGAGTGAATGCTAACGATGACGATTGTTCCTGGATAATGCATGAATACACACTTGATCCTACCGTCCTAACCAATGGGTTTGTACATGATTCGTATGTAGTTTGTCTGATTCGAAAAAGAATATTGAAAAAGGTAAGAAATACAGTCTCGTCAACCATACAAGCACCCTTTGTTTTTAATGGCCCTACAACAACACAAACAGATGCCCTCTACATGGATGGGGTCAATAAATGGTACATATCATTTCTTATCGATCAAAATTATATATATTTTAACATTGTTCATAATAATTATTATTTTTTTCATTTTTACAGTCCAGCACAAATGATAGAATCACAAGATGATATAATATTTGCAAATGAGCTTGAAGAGCAACTAGAAGAATTAAATCCAGAACATTCTGATAATATAATGTTCGCAAATGAGCTTGAGAACCAATTAGAAGAATTAGATGCGGAACATTCTGATGATATAATGTTCGCAAATGAGCCTGAGAACCAATTAGAAGAATTAAATGCGGAACATTCTGATGATATAATGTTCGCAACTGAGATTGAGAATCAACTAGAAGAATTAGATGCGGAACATTATGATGATATAATGTTAGCAAATAATTTTGAGAACCAACGGGAAGAATTAAATGCCGAACATTACGACATAGAAAAAGATTCAAGCAAGGACTTTGAATGGTAG ATGGATTCAAGCATGTTTCCGTTCGGCTACGACTTCGCTCCCACAGATGAAGAACTATTGATCTATTATTTGTTTCACAAGATTGTTGGAGACATTGTTCCGTCAATTTCGTTGCCTGTGATCGATATTTACTCCCATGAACCTGCTATGATATGGCAACAATGCGGAGGAATGGAGGATAAAGACATCTACTTTTTCACGACCCTAAAAAAGAAGAAATCTCGTATCATCAGGAAGGTCGGTATTAATGGTGGCACTTGGAGTGGGGAGAGCAAAGGTCATAAAGTATTTTCTTCCGCTAACAATGCTCCCATTGGTACTATTAAACGTTTCCATTATGAGACTTCTGGAGGAGTGAATGCTAACGATGACGATTGTTCCTGGATAATGCATGAATACACACTTGATCCTACCGTCCTAACCAATGGGTTTGTACATGATTCGTATGTAGTTTGTCTGATTCGAAAAAGAATATTGAAAAAGGTAAGAAATACAGTCTCGTCAACCATACAAGCACCCTTTGTTTTTAATGGCCCTACAACAACACAAACAGATGCCCTCTACATGGATGGGGTCAATAAATGGTACATATCATTTCTTATCGATCAAAATTATATATATTTTAACATTGTTCATAATAATTATTATTTTTTTCATTTTTACAGTCCAGCACAAATGATAGAATCACAAGATGATATAATATTTGCAAATGAGCTTGAAGAGCAACTAGAAGAATTAAATCCAGAACATTCTGATAATATAATGTTCGCAAATGAGCTTGAGAACCAATTAGAAGAATTAGATGCGGAACATTCTGATGATATAATGTTCGCAAATGAGCCTGAGAACCAATTAGAAGAATTAAATGCGGAACATTCTGATGATATAATGTTCGCAACTGAGATTGAGAATCAACTAGAAGAATTAGATGCGGAACATTATGATGATATAATGTTAGCAAATAATTTTGAGAACCAACGGGAAGAATTAAATGCCGAACATTACGACATAGAAAAAGATTCAAGCAAGGACTTTGAATGGTAG ATGGATTCAAGCATGTTTCCGTTCGGCTACGACTTCGCTCCCACAGATGAAGAACTATTGATCTATTATTTGTTTCACAAGATTGTTGGAGACATTGTTCCGTCAATTTCGTTGCCTGTGATCGATATTTACTCCCATGAACCTGCTATGATATGGCAACAATGCGGAGGAATGGAGGATAAAGACATCTACTTTTTCACGACCCTAAAAAAGAAGAAATCTCGTATCATCAGGAAGGTCGGTATTAATGGTGGCACTTGGAGTGGGGAGAGCAAAGGTCATAAAGTATTTTCTTCCGCTAACAATGCTCCCATTGGTACTATTAAACGTTTCCATTATGAGACTTCTGGAGGAGTGAATGCTAACGATGACGATTGTTCCTGGATAATGCATGAATACACACTTGATCCTACCGTCCTAACCAATGGGTTTGTACATGATTCGTATGTAGTTTGTCTGATTCGAAAAAGAATATTGAAAAAGGTAAGAAATACAGTCTCGTCAACCATACAAGCACCCTTTGTTTTTAATGGCCCTACAACAACACAAACAGATGCCCTCTACATGGATGGGGTCAATAAATGGTACATATCATTTCTTATCGATCAAAATTATATATATTTTAACATTGTTCATAATAATTATTATTTTTTTCATTTTTACAGTCCAGCACAAATGATAGAATCACAAGATGATATAATATTTGCAAATGAGCTTGAAGAGCAACTAGAAGAATTAAATCCAGAACATTCTGATAATATAATGTTCGCAAATGAGCTTGAGAACCAATTAGAAGAATTAGATGCGGAACATTCTGATGATATAATGTTCGCAAATGAGCCTGAGAACCAATTAGAAGAATTAAATGCGGAACATTCTGATGATATAATGTTCGCAACTGAGATTGAGAATCAACTAGAAGAATTAGATGCGGAACATTATGATGATATAATGTTAGCAAATAATTTTGAGAACCAACGGGAAGAATTAAATGCCGAACATTACGACATAGAAAAAGATTCAAGCAAGGACTTTGAATGGTAG MDSSMFPFGYDFAPTDEELLIYYLFHKIVGDIVPSISLPVIDIYSHEPAMIWQQCGGMEDKDIYFFTTLKKKKSRIIRKVGINGGTWSGESKGHKVFSSANNAPIGTIKRFHYETSGGVNANDDDCSWIMHEYTLDPTVLTNGFVHDSYVVCLIRKRILKKVRNTVSSTIQAPFVFNGPTTTQTDALYMDGVNKWYISFLIDQNYIYFNIVHNNYYFFHFYSPAQMIESQDDIIFANELEEQLEELNPEHSDNIMFANELENQLEELDAEHSDDIMFANEPENQLEELNAEHSDDIMFATEIENQLEELDAEHYDDIMLANNFENQREELNAEHYDIEKDSSKDFEW
BLAST of Cp4.1LG03g02140 vs. Swiss-Prot
Match: NAC82_ARATH (NAC domain-containing protein 82 OS=Arabidopsis thaliana GN=NAC082 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.2e-10 Identity = 53/155 (34.19%), Postives = 75/155 (48.39%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. Swiss-Prot
Match: NAC83_ARATH (NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.3e-09 Identity = 54/203 (26.60%), Postives = 88/203 (43.35%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. Swiss-Prot
Match: NC101_ARATH (NAC domain-containing protein 101 OS=Arabidopsis thaliana GN=NAC101 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 5.1e-09 Identity = 60/184 (32.61%), Postives = 83/184 (45.11%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. Swiss-Prot
Match: NAC37_ARATH (NAC domain-containing protein 37 OS=Arabidopsis thaliana GN=NAC037 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 8.7e-09 Identity = 53/169 (31.36%), Postives = 72/169 (42.60%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. Swiss-Prot
Match: NAC29_ARATH (NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08 Identity = 47/162 (29.01%), Postives = 72/162 (44.44%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TrEMBL
Match: A0A0A0LWA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G224380 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45 Identity = 121/291 (41.58%), Postives = 169/291 (58.08%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TrEMBL
Match: A0A0A0L807_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110040 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43 Identity = 95/186 (51.08%), Postives = 124/186 (66.67%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TrEMBL
Match: V4TFZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033957mg PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.7e-22 Identity = 69/160 (43.12%), Postives = 89/160 (55.62%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TrEMBL
Match: V4TL36_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033436mg PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.8e-22 Identity = 68/160 (42.50%), Postives = 89/160 (55.62%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TrEMBL
Match: V4TL27_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10033346mg PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.8e-22 Identity = 69/160 (43.12%), Postives = 89/160 (55.62%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TAIR10
Match: AT1G65910.1 (AT1G65910.1 NAC domain containing protein 28) HSP 1 Score: 75.9 bits (185), Expect = 5.6e-14 Identity = 60/196 (30.61%), Postives = 92/196 (46.94%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TAIR10
Match: AT5G09330.1 (AT5G09330.1 NAC domain containing protein 82) HSP 1 Score: 68.9 bits (167), Expect = 6.8e-12 Identity = 53/155 (34.19%), Postives = 75/155 (48.39%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TAIR10
Match: AT5G46590.1 (AT5G46590.1 NAC domain containing protein 96) HSP 1 Score: 68.9 bits (167), Expect = 6.8e-12 Identity = 54/161 (33.54%), Postives = 77/161 (47.83%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TAIR10
Match: AT5G13180.1 (AT5G13180.1 NAC domain containing protein 83) HSP 1 Score: 65.5 bits (158), Expect = 7.5e-11 Identity = 54/203 (26.60%), Postives = 88/203 (43.35%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. TAIR10
Match: AT3G10490.2 (AT3G10490.2 NAC domain containing protein 52) HSP 1 Score: 64.7 bits (156), Expect = 1.3e-10 Identity = 48/154 (31.17%), Postives = 67/154 (43.51%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. NCBI nr
Match: gi|659085728|ref|XP_008443570.1| (PREDICTED: NAC domain-containing protein 55-like [Cucumis melo]) HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54 Identity = 136/354 (38.42%), Postives = 209/354 (59.04%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. NCBI nr
Match: gi|778664815|ref|XP_011660358.1| (PREDICTED: uncharacterized protein LOC105436381 [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 1.6e-50 Identity = 101/183 (55.19%), Postives = 135/183 (73.77%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. NCBI nr
Match: gi|700210011|gb|KGN65107.1| (hypothetical protein Csa_1G224380 [Cucumis sativus]) HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45 Identity = 121/291 (41.58%), Postives = 169/291 (58.08%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. NCBI nr
Match: gi|700201123|gb|KGN56256.1| (hypothetical protein Csa_3G110040 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43 Identity = 95/186 (51.08%), Postives = 124/186 (66.67%), Query Frame = 1
BLAST of Cp4.1LG03g02140 vs. NCBI nr
Match: gi|567889569|ref|XP_006437305.1| (hypothetical protein CICLE_v10033957mg [Citrus clementina]) HSP 1 Score: 114.0 bits (284), Expect = 5.2e-22 Identity = 69/160 (43.12%), Postives = 89/160 (55.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |