Cp4.1LG02g16780 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g16780
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionE3 ubiquitin-protein ligase
LocationCp4.1LG02 : 12627720 .. 12630480 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTAAAATGAACCTTTATTGATACGACCGCAGATAAAGTAGAAAAGAAATGAGAAATATAAAAATGTTTTTTTAAAATCAAATGACGAAACTACCCCTCAATTTCGGAATAAAACTGTTTTTTTCACGACGGAAAGACTTAGATGATCTGCCAAGTCTTCGTCCTCACGGTCTGACGAAGAGCAGAGACTAACTTGAAGAAGAACAAATGGCGGATTCTCGATCATCGGACGGCGAAAAGGAGAGGCGACGTTCGGTCAACTGTAGCAGAGGGAAGAATGAGGCGATGAAAGTCATATTCACTGATCCTCAAATTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGGTCCGATTAAGCTTTTTGATCGCCTGTATTTTGCTTGCAATTATCGTTATTATTTATCTGTTTGTCTCTGATGCTTTGTTCTTCTCGTCTTTTTTGTTTTAGTTTGTATTTTTAAAATGTTATTTTTTGTTTATTTTGTTTANCTACTGTAGTTCACTTAGTGTTTTTGCTGGAATTGACGATTTTGGAATCCTCCTTTCTATGAGGTTTTTACCTTACCGTTTTGATTTTTTTTTTTGTGTAAATCCACAGAAGTTATGGATTATGATAACAATTGAAGAAATATAGCGAAGTTTTGAACGGTTATTCATTGCAACGTTGTCTAATTTGAGCATAAGCTCTCGGACCTTGTTTTTGGTTTTCCAAAAGGCCTCGTACCAACGGAAATAGTGTTACTTACCTGTAAAGTCATGATTTTCCTCTTAATTAGCTAATCTAGACTACTCCTTTCAATAATCCTCAACAATCCTCCCATCGAACAAACGACACCATAGAGTCTCCTCTGAGGCCTATAGAGCCATCGAACAACCTCTCTTTAATTGAGGCTGGACTCCTTTCTTTGGAGCCTCTAAACAAAATACACCTTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAAACTCACTTCTTTGTTCGACACTTGAGGATTCTATTGATATAGCCAAGTTAAGGGCATAACTCTTATATAATGTTAGGAATCACGAACCTCCACAATGATATGATATTGTCCACTCTGAGCATAAGCTCTCGACTTTACTTTTGGTTTCTCCAAAAGGGCTCGTACCATGGAAAACCATGAAAATTTACTTATAAACTCATGATCTTACTCTTAATTAGCCAACGTGAGACTTCCAATAATCTTGAAAACTGAAGTTATTAAAGGTTTTGATTCAAATAATCTTTGAACATGGAGATTATTCTGGATATTACGGGGACAGAGTTGTTAAATGGATGGGATTGAAATGAAATCTTGACCTGAATTGCTTATCTTGTTACATTGTCTCGAGAAAATGTCAGAATCAAGTGGTGCTTGATATTCTTTTCACCTTTCTGTGCCTGACTTGGGGTTCAATCGTGTGGACTGTGGTGTTGGATGAGGGAAGTCCCACATCGACTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTAACTCCATTGGAATGAGGCATTTTGGAGAAGCCCAAAACAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATGTGAGATTTTCTTCATTGTTTACAAACATGAATTTGAAAGGGATGAATCTAGAAGAAAATAAGCTTATATCTCATTTTGTTTTCTATGAGTCTATTTTATTTCATAACATATACTCTGGTGTTGAGATGTTGGTTGTTGGATGAATTAGTGCGAGAACGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCAAGCTGCAGCTTGGCCATCGGCTACATACGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATCAAGATACCATGCCAAAACTCAACATATGGATGCAAAATCACAATGAATTTGAACCAGATAAACGAGCACGAGACATCGTGCCCATATGAACCCTGTTCGTGCCCTATATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCAAGACTCAGCCAAAAGCTTCTTATACAATTCAAGGTTCACAATATGCTTGAACAGTGGTGATAGATATCGTATCTTTCAAGCAGAGAACGATGATGCTTTGTTTGTCCTGTCTTACTCCTTTGAAATCTTTGGCAATGCGGTTACTTTGAGCCGGATTGGATCTCCGTTGTGTGAGAAGAAGTTTTGTTATGATATCAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCAATCAGTGGCGAATGAGATCCGACGTTGGATTGAAGATCCTCCTTTCAAGGGGTCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAAGATCAACACTGGGGATCAACACAGGTGCACATACATTTTTTTTGAAACAAAGCTGAATTATTGTTTGAACTGAGTTAATCTTTGCATCTGTGTTTTCTTTGTTTTTTTGGGAAGGACTTGGTGCATACTTTTGTGCATATATATCTATATGGGTTTGTTGAACTTTTAATCTTGTATGGAATAGAACACTAATGTTGAGTGGGTCTATGGCCGATATCGCTTAGTTGTTGGTAGAGCAAATGACTCAAAATCTGCCTTATAGGGAAAGTAAAATATTTATTGAAACAAAGTGGAAGCTAAATTTATAGTTACCTATTT

mRNA sequence

TTTTTAAAATGAACCTTTATTGATACGACCGCAGATAAAGTAGAAAAGAAATGAGAAATATAAAAATGTTTTTTTAAAATCAAATGACGAAACTACCCCTCAATTTCGGAATAAAACTGTTTTTTTCACGACGGAAAGACTTAGATGATCTGCCAAGTCTTCGTCCTCACGGTCTGACGAAGAGCAGAGACTAACTTGAAGAAGAACAAATGGCGGATTCTCGATCATCGGACGGCGAAAAGGAGAGGCGACGTTCGGTCAACTGTAGCAGAGGGAAGAATGAGGCGATGAAAGTCATATTCACTGATCCTCAAATTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGTGCGAGAACGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCAAGCTGCAGCTTGGCCATCGGCTACATACGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATCAAGATACCATGCCAAAACTCAACATATGGATGCAAAATCACAATGAATTTGAACCAGATAAACGAGCACGAGACATCGTGCCCATATGAACCCTGTTCGTGCCCTATATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCAAGACTCAGCCAAAAGCTTCTTATACAATTCAAGGTTCACAATATGCTTGAACAGTGGTGATAGATATCGTATCTTTCAAGCAGAGAACGATGATGCTTTGTTTGTCCTGTCTTACTCCTTTGAAATCTTTGGCAATGCGGTTACTTTGAGCCGGATTGGATCTCCGTTGTGTGAGAAGAAGTTTTGTTATGATATCAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCAATCAGTGGCGAATGAGATCCGACGTTGGATTGAAGATCCTCCTTTCAAGGGGTCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAAGATCAACACTGGGGATCAACACAGGTGCACATACATTTTTTTTGAAACAAAGCTGAATTATTGTTTGAACTGAGTTAATCTTTGCATCTGTGTTTTCTTTGTTTTTTTGGGAAGGACTTGGTGCATACTTTTGTGCATATATATCTATATGGGTTTGTTGAACTTTTAATCTTGTATGGAATAGAACACTAATGTTGAGTGGGTCTATGGCCGATATCGCTTAGTTGTTGGTAGAGCAAATGACTCAAAATCTGCCTTATAGGGAAAGTAAAATATTTATTGAAACAAAGTGGAAGCTAAATTTATAGTTACCTATTT

Coding sequence (CDS)

ATGGCGGATTCTCGATCATCGGACGGCGAAAAGGAGAGGCGACGTTCGGTCAACTGTAGCAGAGGGAAGAATGAGGCGATGAAAGTCATATTCACTGATCCTCAAATTCTCGATTGCTATATTTGTTGCGAGCCCTTGTCCGTTCCTGTTTACCAGTGCGAGAACGGGCATATTTCTTGCTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCAAGCTGCAGCTTGGCCATCGGCTACATACGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATCAAGATACCATGCCAAAACTCAACATATGGATGCAAAATCACAATGAATTTGAACCAGATAAACGAGCACGAGACATCGTGCCCATATGAACCCTGTTCGTGCCCTATATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCAAGACTCAGCCAAAAGCTTCTTATACAATTCAAGGTTCACAATATGCTTGAACAGTGGTGATAGATATCGTATCTTTCAAGCAGAGAACGATGATGCTTTGTTTGTCCTGTCTTACTCCTTTGAAATCTTTGGCAATGCGGTTACTTTGAGCCGGATTGGATCTCCGTTGTGTGAGAAGAAGTTTTGTTATGATATCAAAGCCAAATCACAGGGGAGTGTTCTTTCTTTGCAATCAGTGGCGAATGAGATCCGACGTTGGATTGAAGATCCTCCTTTCAAGGGGTCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGA

Protein sequence

MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILEIRIWPSR
Homology
[Close]
BLAST of Cp4.1LG02g16780 vs. Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.1e-49
Identity = 108/280 (38.57%), Postives = 153/280 (54.64%), Query Frame = 1 

Query: 4   SRSSDGE---KERR-----RSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCEN 63
           S  SD E   +ERR      S + S  K+  + V   DP +LDC ICCEPL +P++QC+N
Sbjct: 70  SDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQCDN 129

Query: 64  GHISCSSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINE 123
           GH++C+ CC+KV N+CPSC+L IGY+RCRA+EKV+E+ ++ C N+ YGCK + +      
Sbjct: 130 GHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFS 189

Query: 124 HETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIF 183
           HE  C + PCSCPI DC Y    + L +H R  H+D   SF++N+R TI L+   +  I 
Sbjct: 190 HEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKTTIL 249

Query: 184 QAENDDALFVLSYSFEIFGNAVTLS-------RIGSPLCE-KKFCYDIKAKSQGSVLSLQ 243
           Q END  + V+     +    V++S        +G   C   K   D   K    V ++Q
Sbjct: 250 QEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQ 309

Query: 244 SVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILEIRIW 268
            V NE        P  G +LIP+  F   S    L ++IW
Sbjct: 310 KVTNE-------HPEDGFMLIPSYLF---SGNDNLNLQIW 339

[Close]
BLAST of Cp4.1LG02g16780 vs. Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37
Identity = 88/263 (33.46%), Postives = 143/263 (54.37%), Query Frame = 1 

Query: 12  ERRRSVNCSRGKNEAMK--VIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHN 71
           ++R+  +    K +A K   +  D +ILDC IC E  ++P++QC+NGH++CSSCC K++N
Sbjct: 22  QKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNN 81

Query: 72  KCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPI 131
           KCP+C+  +G+ RCRA+E VLESI IPC N+  GCK  ++  +   HE  C +  C+CP 
Sbjct: 82  KCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPA 141

Query: 132 SDCSYVDSAEHLGSHFRKRHQD--SAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLS 191
            DC+Y  S + L +H+R  H +     +F+ +   ++ +N   +  I      + LF + 
Sbjct: 142 LDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQ 201

Query: 192 YSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFK 251
              E +G  VT+S I     E  ++ Y +     G  +  QS   E++R ++     P +
Sbjct: 202 CFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQS--PEVKRVLKLSFQTPQE 261

Query: 252 GSLLIPNEFFGSSSAQTILEIRI 267
             +LIPN          +LE+RI
Sbjct: 262 NFMLIPNSLLRGD----VLEMRI 278

[Close]
BLAST of Cp4.1LG02g16780 vs. Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-35
Identity = 85/255 (33.33%), Postives = 136/255 (53.33%), Query Frame = 1 

Query: 4   SRSSDGEKERRRSVNCSRGKNEAMKV---IFTDPQILDCYICCEPLSVPVYQCENGHISC 63
           S  +  +K    S++   G+    K    + TD  ILDC IC + L +PV+QC NGH++C
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 64  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 123
           SSCC K+ NKCP+C+L +G+IRCRA+E+VLES+ +PC+ +  GC  T+   + + HE  C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 124 PYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYN--SRFTICLNSGDRYRIFQAE 183
            + PCSCP+  C+Y  S + L  H+   H   + ++ +N  S     +   D+  I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 184 NDDALFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKS-QGSVLSLQS-VANEIRR 243
               LFV+    E  G  V++S I     E  +F Y +   + +G  ++ QS    ++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLK 246

Query: 244 WIEDPPFKGSLLIPN 251
                P    +LIP+
Sbjct: 247 VSSQRPKDSFMLIPH 261

[Close]
BLAST of Cp4.1LG02g16780 vs. Swiss-Prot
Match: SIL11_ARATH (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE=2 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-35
Identity = 91/270 (33.70%), Postives = 135/270 (50.00%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGK----NEAMKVIFTDPQILDCYICCEPLSVPVYQCENG 60
           M DS S    +  +R  +  + K    NE       D  +LDC +C EPL++P +QC++G
Sbjct: 1   MEDSNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDG 60

Query: 61  HISCSSCCSKVHNKCPS--CSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQIN 120
           HI C+ C +KV NKCP   C L IG  RC A+E+VLES  +PCQN+ +GC  +++  +++
Sbjct: 61  HIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVS 120

Query: 121 EHETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFT----------I 180
            HE  C Y  CSCP  +C+Y  S   +  HF +RH       LYNS             +
Sbjct: 121 SHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRH-------LYNSTIVSSKWGYSTVDV 180

Query: 181 CLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSV 240
            +N  ++  +        LFV+    E  G  VT+ RI  P  E KKF Y +     G  
Sbjct: 181 LINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHN 240

Query: 241 LSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           ++ +S   E++R +E     P    + +PN
Sbjct: 241 VTYES--PEVKRLLEVNSQIPDDSFMFVPN 261

[Close]
BLAST of Cp4.1LG02g16780 vs. Swiss-Prot
Match: SINL9_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g37910 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.5e-35
Identity = 82/236 (34.75%), Postives = 125/236 (52.97%), Query Frame = 1 

Query: 23  KNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIR 82
           K +   ++  D  ILDC ICCE L+ P++QC+NGH++C SCC K+ NKCP+C+L +G+ R
Sbjct: 22  KRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSR 81

Query: 83  CRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLG 142
            RA+E VLESI IPC N  +GC  +    + + HE  C +  CSCP S C Y  S + L 
Sbjct: 82  SRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLY 141

Query: 143 SHFRKRHQD----SAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVT 202
           +H++  H      + K F   + FT  +   D+  I +      L  +    E  G  VT
Sbjct: 142 AHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVT 201

Query: 203 LSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           +S I     E  +F Y +     G  ++ +S   E++R  +   + P +  +LIP+
Sbjct: 202 VSFIAPSAPEVGEFSYQLSYNVDGHTVTYES--PEVKRVCKVSIETPQENFMLIPH 255

[Close]
BLAST of Cp4.1LG02g16780 vs. TrEMBL
Match: A0A0A0L9Z6_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.6e-110
Identity = 192/269 (71.38%), Postives = 224/269 (83.27%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISC 60
           M DSRSSDG  ERR SV   RG N  + VIFTDPQILDCYICCEPLS+PV+QCENGHI+C
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 120
           SSCC+K  NKCPSC+LAIGYIRCRAIEKVLESIK+PCQN+ YGCK  M LN IN+HE+ C
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 PYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAEND 180
            YEPCSCP+ +C++V S E LG HF K+H+DSAK F YN+RFTICLN+GD +RI +AEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 DALFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDP 240
             LF LSY+FEIFGNAVT++RIG    EKKFCY+IKAK+ GSVLSLQS+A EI+  I+ P
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PFKGSLLIPNEFFGSSSAQTILEIRIWPS 270
           P KGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]
BLAST of Cp4.1LG02g16780 vs. TrEMBL
Match: V4UW18_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.3e-63
Identity = 120/254 (47.24%), Postives = 162/254 (63.78%), Query Frame = 1 

Query: 3   DSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSS 62
           +S  + G  E+         +N    V  TDP++ DC IC E L+ PV+QCENGHI+CS+
Sbjct: 52  ESVDNGGNGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACST 111

Query: 63  CCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPY 122
           CCSK+ NKCPSC   IGY RCRAIEKVLES+K+ C+NS YGCK+TM+  + ++HE  CP+
Sbjct: 112 CCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPH 171

Query: 123 EPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDA 182
            PCSCPI DC++V SA HL  HF  +H++SA  FLYN    + LN  +R+ + Q E D  
Sbjct: 172 VPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVKNRFIVLQEEGDGV 231

Query: 183 LFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPF 242
           LF+LS   E  G+ +++S I +P C+    Y I A   GS +  QS    I+  +++PP 
Sbjct: 232 LFILSSRSETLGHVISVSCI-APSCKGCLFYSIFAGPAGSTVRFQSFTKNIQNRVDNPPS 291

Query: 243 KGSLLIPNEFFGSS 257
            G LL+P E FGSS
Sbjct: 292 TGFLLVPIESFGSS 304

[Close]
BLAST of Cp4.1LG02g16780 vs. TrEMBL
Match: A0A067FAH4_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.3e-63
Identity = 120/254 (47.24%), Postives = 162/254 (63.78%), Query Frame = 1 

Query: 3   DSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSS 62
           +S  + G  E+         +N    V  TDP++ DC IC E L+ PV+QCENGHI+CS+
Sbjct: 52  ESVDNGGNGEKADLDLAGPSRNGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACST 111

Query: 63  CCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPY 122
           CCSK+ NKCPSC   IGY RCRAIEKVLES+K+ C+NS YGCK+TM+  + ++HE  CP+
Sbjct: 112 CCSKIMNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPH 171

Query: 123 EPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDA 182
            PCSCPI DC++V SA HL  HF  +H++SA  FLYN    + LN  +R+ + Q E D  
Sbjct: 172 VPCSCPIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVKNRFIVLQEEGDGV 231

Query: 183 LFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPF 242
           LF+LS   E  G+ +++S I +P C+    Y I A   GS +  QS    I+  +++PP 
Sbjct: 232 LFILSSRSETLGHVISVSCI-APSCKGCLFYSIFAGPAGSTVRFQSFTKNIQNRVDNPPS 291

Query: 243 KGSLLIPNEFFGSS 257
            G LL+P E FGSS
Sbjct: 292 TGFLLVPIESFGSS 304

[Close]
BLAST of Cp4.1LG02g16780 vs. TrEMBL
Match: W9S0Z7_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.6e-62
Identity = 124/254 (48.82%), Postives = 166/254 (65.35%), Query Frame = 1 

Query: 3   DSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSS 62
           DS S+D  +E  R +  S   + ++ V  TDP +LDC IC E L+VPV+QCENGHI+CSS
Sbjct: 90  DSISADANQEDPRPL--STNSDRSISVFLTDPDVLDCCICFEALTVPVFQCENGHIACSS 149

Query: 63  CCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPY 122
           CC+K+ NKCPSCS  IGY RCRAIEKVLES+KI CQN  YGCK  ++ ++I +HET+C +
Sbjct: 150 CCTKLGNKCPSCSWPIGYNRCRAIEKVLESVKIACQNKQYGCKEMVSYSEIKDHETTCTH 209

Query: 123 EPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDA 182
            PCSCP++ C+++ SA+ L  HFR +H DSA  F YN  FT+ LN GD++ + Q  +   
Sbjct: 210 APCSCPLTSCNFISSAKQLYQHFRSQHADSAVLFQYNCDFTVTLNEGDKFLVLQERDGGG 269

Query: 183 LFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPF 242
           LF+L+   E  GN V++S IG P    K  Y++ AK  G+ L L+S A   +   +    
Sbjct: 270 LFILNNETETLGNLVSVSCIG-PYSFGKSYYNLLAKCDGNTLRLESFATCTQGQADYSLS 329

Query: 243 KGSLLIPNEFFGSS 257
              LLIP  FFGSS
Sbjct: 330 SVYLLIPPGFFGSS 340

[Close]
BLAST of Cp4.1LG02g16780 vs. TrEMBL
Match: A0A061EGM7_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.2e-62
Identity = 113/254 (44.49%), Postives = 169/254 (66.54%), Query Frame = 1 

Query: 16  SVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCS 75
           +++    ++ ++ +  TDP++LDC IC E L++PV+QCENGHI+CS CC K+ NKCPSC+
Sbjct: 82  AMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQCENGHIACSICCIKIRNKCPSCA 141

Query: 76  LAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYV 135
             IGY RCRAIEKVLES+K+ CQN+ YGC+     +   +HE  CPY PCSCP++DC++ 
Sbjct: 142 TPIGYSRCRAIEKVLESVKVSCQNTKYGCREAFRYSIKQKHEKICPYAPCSCPLADCNFE 201

Query: 136 DSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGN 195
            S++ L  HFR +H+ SA  F Y+   +I +   +R+ I Q E D +LF+L+   E  GN
Sbjct: 202 GSSKELYEHFRDKHKYSATRFQYDRTISITVGIDERFCILQEEQDGSLFILNNKVETLGN 261

Query: 196 AVTLSRIGSPLCEKKFCYDIKAK--SQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFF 255
            VTLSRIG P  E+ F YD+ AK  ++ S + LQS      + +++PP  G LL+P++ F
Sbjct: 262 VVTLSRIG-PSEERGFFYDLMAKALTEASTVRLQSFTKSTPKQVDNPPSLGFLLVPSQ-F 321

Query: 256 GSSSAQTILEIRIW 268
             +S +  +++R+W
Sbjct: 322 SCNSRKLKMDLRLW 333

[Close]
BLAST of Cp4.1LG02g16780 vs. TAIR10
Match: AT5G37930.1 (AT5G37930.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-50
Identity = 108/280 (38.57%), Postives = 153/280 (54.64%), Query Frame = 1 

Query: 4   SRSSDGE---KERR-----RSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCEN 63
           S  SD E   +ERR      S + S  K+  + V   DP +LDC ICCEPL +P++QC+N
Sbjct: 70  SDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQCDN 129

Query: 64  GHISCSSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINE 123
           GH++C+ CC+KV N+CPSC+L IGY+RCRA+EKV+E+ ++ C N+ YGCK + +      
Sbjct: 130 GHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFS 189

Query: 124 HETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIF 183
           HE  C + PCSCPI DC Y    + L +H R  H+D   SF++N+R TI L+   +  I 
Sbjct: 190 HEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKTTIL 249

Query: 184 QAENDDALFVLSYSFEIFGNAVTLS-------RIGSPLCE-KKFCYDIKAKSQGSVLSLQ 243
           Q END  + V+     +    V++S        +G   C   K   D   K    V ++Q
Sbjct: 250 QEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVKNIQ 309

Query: 244 SVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILEIRIW 268
            V NE        P  G +LIP+  F   S    L ++IW
Sbjct: 310 KVTNE-------HPEDGFMLIPSYLF---SGNDNLNLQIW 339

[Close]
BLAST of Cp4.1LG02g16780 vs. TAIR10
Match: AT5G37890.1 (AT5G37890.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 88/263 (33.46%), Postives = 143/263 (54.37%), Query Frame = 1 

Query: 12  ERRRSVNCSRGKNEAMK--VIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHN 71
           ++R+  +    K +A K   +  D +ILDC IC E  ++P++QC+NGH++CSSCC K++N
Sbjct: 22  QKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNN 81

Query: 72  KCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPI 131
           KCP+C+  +G+ RCRA+E VLESI IPC N+  GCK  ++  +   HE  C +  C+CP 
Sbjct: 82  KCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPA 141

Query: 132 SDCSYVDSAEHLGSHFRKRHQD--SAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLS 191
            DC+Y  S + L +H+R  H +     +F+ +   ++ +N   +  I      + LF + 
Sbjct: 142 LDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQ 201

Query: 192 YSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFK 251
              E +G  VT+S I     E  ++ Y +     G  +  QS   E++R ++     P +
Sbjct: 202 CFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQS--PEVKRVLKLSFQTPQE 261

Query: 252 GSLLIPNEFFGSSSAQTILEIRI 267
             +LIPN          +LE+RI
Sbjct: 262 NFMLIPNSLLRGD----VLEMRI 278

[Close]
BLAST of Cp4.1LG02g16780 vs. TAIR10
Match: AT5G37870.1 (AT5G37870.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 151.8 bits (382), Expect = 6.2e-37
Identity = 85/255 (33.33%), Postives = 136/255 (53.33%), Query Frame = 1 

Query: 4   SRSSDGEKERRRSVNCSRGKNEAMKV---IFTDPQILDCYICCEPLSVPVYQCENGHISC 63
           S  +  +K    S++   G+    K    + TD  ILDC IC + L +PV+QC NGH++C
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 64  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 123
           SSCC K+ NKCP+C+L +G+IRCRA+E+VLES+ +PC+ +  GC  T+   + + HE  C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 124 PYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYN--SRFTICLNSGDRYRIFQAE 183
            + PCSCP+  C+Y  S + L  H+   H   + ++ +N  S     +   D+  I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 184 NDDALFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKS-QGSVLSLQS-VANEIRR 243
               LFV+    E  G  V++S I     E  +F Y +   + +G  ++ QS    ++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLK 246

Query: 244 WIEDPPFKGSLLIPN 251
                P    +LIP+
Sbjct: 247 VSSQRPKDSFMLIPH 261

[Close]
BLAST of Cp4.1LG02g16780 vs. TAIR10
Match: AT5G62800.1 (AT5G62800.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 151.4 bits (381), Expect = 8.1e-37
Identity = 91/270 (33.70%), Postives = 135/270 (50.00%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGK----NEAMKVIFTDPQILDCYICCEPLSVPVYQCENG 60
           M DS S    +  +R  +  + K    NE       D  +LDC +C EPL++P +QC++G
Sbjct: 1   MEDSNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDG 60

Query: 61  HISCSSCCSKVHNKCPS--CSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQIN 120
           HI C+ C +KV NKCP   C L IG  RC A+E+VLES  +PCQN+ +GC  +++  +++
Sbjct: 61  HIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVS 120

Query: 121 EHETSCPYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFT----------I 180
            HE  C Y  CSCP  +C+Y  S   +  HF +RH       LYNS             +
Sbjct: 121 SHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRH-------LYNSTIVSSKWGYSTVDV 180

Query: 181 CLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIGSPLCE-KKFCYDIKAKSQGSV 240
            +N  ++  +        LFV+    E  G  VT+ RI  P  E KKF Y +     G  
Sbjct: 181 LINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHN 240

Query: 241 LSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           ++ +S   E++R +E     P    + +PN
Sbjct: 241 VTYES--PEVKRLLEVNSQIPDDSFMFVPN 261

[Close]
BLAST of Cp4.1LG02g16780 vs. TAIR10
Match: AT5G37910.1 (AT5G37910.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36
Identity = 82/236 (34.75%), Postives = 125/236 (52.97%), Query Frame = 1 

Query: 23  KNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIR 82
           K +   ++  D  ILDC ICCE L+ P++QC+NGH++C SCC K+ NKCP+C+L +G+ R
Sbjct: 22  KRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSR 81

Query: 83  CRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLG 142
            RA+E VLESI IPC N  +GC  +    + + HE  C +  CSCP S C Y  S + L 
Sbjct: 82  SRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLY 141

Query: 143 SHFRKRHQD----SAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVT 202
           +H++  H      + K F   + FT  +   D+  I +      L  +    E  G  VT
Sbjct: 142 AHYKLTHSTNIFWNIKRFRCANFFTTSMLISDKILIKRVHEKKLLLAVQCFREPCGVYVT 201

Query: 203 LSRIGSPLCE-KKFCYDIKAKSQGSVLSLQSVANEIRRWIE---DPPFKGSLLIPN 251
           +S I     E  +F Y +     G  ++ +S   E++R  +   + P +  +LIP+
Sbjct: 202 VSFIAPSAPEVGEFSYQLSYNVDGHTVTYES--PEVKRVCKVSIETPQENFMLIPH 255

[Close]
BLAST of Cp4.1LG02g16780 vs. NCBI nr
Match: gi|778679778|ref|XP_004140738.2| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 2.3e-110
Identity = 192/269 (71.38%), Postives = 224/269 (83.27%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISC 60
           M DSRSSDG  ERR SV   RG N  + VIFTDPQILDCYICCEPLS+PV+QCENGHI+C
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 120
           SSCC+K  NKCPSC+LAIGYIRCRAIEKVLESIK+PCQN+ YGCK  M LN IN+HE+ C
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 PYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAEND 180
            YEPCSCP+ +C++V S E LG HF K+H+DSAK F YN+RFTICLN+GD +RI +AEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 DALFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDP 240
             LF LSY+FEIFGNAVT++RIG    EKKFCY+IKAK+ GSVLSLQS+A EI+  I+ P
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PFKGSLLIPNEFFGSSSAQTILEIRIWPS 270
           P KGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]
BLAST of Cp4.1LG02g16780 vs. NCBI nr
Match: gi|659114528|ref|XP_008457096.1| (PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 1.2e-79
Identity = 144/215 (66.98%), Postives = 170/215 (79.07%), Query Frame = 1 

Query: 1   MADSRSSDGEKERRRSVNCSRGKNEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISC 60
           MADS+SSDG  ERR SV   RG N  M VIFTDPQILDCYIC   LS+P++QCEN HI+C
Sbjct: 1   MADSQSSDGGSERRSSVISRRGTNGTMNVIFTDPQILDCYICWNXLSIPIFQCENXHIAC 60

Query: 61  SSCCSKVHNKCPSCSLAIGYIRCRAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSC 120
           SSCC+KV NKCPSC LAIGYIRCRAIEKVLESIK+PC+N+ Y CK  M+LN IN+ ET C
Sbjct: 61  SSCCTKVQNKCPSCILAIGYIRCRAIEKVLESIKLPCKNAIYRCKTAMDLNLINDQETLC 120

Query: 121 PYEPCSCPISDCSYVDSAEHLGSHFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAEND 180
            YEPCSCP+ +C++V  AE L  HF +RH++SAK F YN+RFTICLN+GD YRI +AE+D
Sbjct: 121 RYEPCSCPLDNCTFVGLAEQLYLHFSRRHKNSAKHFSYNTRFTICLNNGDTYRILKAEDD 180

Query: 181 DALFVLSYSFEIFGNAVTLSRIGSPLCEKKFCYDI 216
             LF LSY+FEIFGNA+T++ IG    EKKF Y I
Sbjct: 181 GVLFFLSYTFEIFGNAITVNWIGPLSSEKKFSYKI 215

[Close]
BLAST of Cp4.1LG02g16780 vs. NCBI nr
Match: gi|470135025|ref|XP_004303331.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 256.5 bits (654), Expect = 5.1e-65
Identity = 126/244 (51.64%), Postives = 156/244 (63.93%), Query Frame = 1 

Query: 24  NEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRC 83
           + ++ +   DP +LDC ICCE L+VPV+QCENGHI+CSSC +KV NKCPSCS  IGY RC
Sbjct: 106 DRSISITLADPDVLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRC 165

Query: 84  RAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGS 143
           RAIEKVLESI+I CQN  YGCK  M  +  NEHE  C + PCSCP S C++V S + L  
Sbjct: 166 RAIEKVLESIRISCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQ 225

Query: 144 HFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIG 203
           HF   H +SA  FLYN  F+I +N  D++ + Q END  LF+L    EI GN V LS I 
Sbjct: 226 HFSSNHLNSATRFLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSI- 285

Query: 204 SPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILE 263
            P     F YD+ AK +G +L LQS     +  +  P   GSL+IP +FF SS  Q  L+
Sbjct: 286 QPRFMGGFFYDLTAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFF-SSCGQLKLD 345

Query: 264 IRIW 268
           I IW
Sbjct: 346 ICIW 347

[Close]
BLAST of Cp4.1LG02g16780 vs. NCBI nr
Match: gi|764606792|ref|XP_011467109.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 256.5 bits (654), Expect = 5.1e-65
Identity = 126/244 (51.64%), Postives = 156/244 (63.93%), Query Frame = 1 

Query: 24  NEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRC 83
           + ++ +   DP +LDC ICCE L+VPV+QCENGHI+CSSC +KV NKCPSCS  IGY RC
Sbjct: 106 DRSISITLADPDVLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRC 165

Query: 84  RAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGS 143
           RAIEKVLESI+I CQN  YGCK  M  +  NEHE  C + PCSCP S C++V S + L  
Sbjct: 166 RAIEKVLESIRISCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQ 225

Query: 144 HFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIG 203
           HF   H +SA  FLYN  F+I +N  D++ + Q END  LF+L    EI GN V LS I 
Sbjct: 226 HFSSNHLNSATRFLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSI- 285

Query: 204 SPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILE 263
            P     F YD+ AK +G +L LQS     +  +  P   GSL+IP +FF SS  Q  L+
Sbjct: 286 QPRFMGGFFYDLTAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFF-SSCGQLKLD 345

Query: 264 IRIW 268
           I IW
Sbjct: 346 ICIW 347

[Close]
BLAST of Cp4.1LG02g16780 vs. NCBI nr
Match: gi|764606798|ref|XP_011467110.1| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 256.5 bits (654), Expect = 5.1e-65
Identity = 126/244 (51.64%), Postives = 156/244 (63.93%), Query Frame = 1 

Query: 24  NEAMKVIFTDPQILDCYICCEPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLAIGYIRC 83
           + ++ +   DP +LDC ICCE L+VPV+QCENGHI+CSSC +KV NKCPSCS  IGY RC
Sbjct: 106 DRSISITLADPDVLDCPICCESLTVPVFQCENGHIACSSCSTKVKNKCPSCSWPIGYNRC 165

Query: 84  RAIEKVLESIKIPCQNSTYGCKITMNLNQINEHETSCPYEPCSCPISDCSYVDSAEHLGS 143
           RAIEKVLESI+I CQN  YGCK  M  +  NEHE  C + PCSCP S C++V S + L  
Sbjct: 166 RAIEKVLESIRISCQNIKYGCKEWMTCDNKNEHEKGCMHSPCSCPHSGCNFVSSTKQLYQ 225

Query: 144 HFRKRHQDSAKSFLYNSRFTICLNSGDRYRIFQAENDDALFVLSYSFEIFGNAVTLSRIG 203
           HF   H +SA  FLYN  F+I +N  D++ + Q END  LF+L    EI GN V LS I 
Sbjct: 226 HFSSNHLNSATRFLYNCSFSITINFNDKFVVLQEENDGMLFILDNESEIIGNMVRLSSI- 285

Query: 204 SPLCEKKFCYDIKAKSQGSVLSLQSVANEIRRWIEDPPFKGSLLIPNEFFGSSSAQTILE 263
            P     F YD+ AK +G +L LQS     +  +  P   GSL+IP +FF SS  Q  L+
Sbjct: 286 QPRFMGGFFYDLTAKRKGCLLRLQSFTTSTQSHVRSPTSSGSLIIPGDFF-SSCGQLKLD 345

Query: 264 IRIW 268
           I IW
Sbjct: 346 ICIW 347

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g16780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SIL10_ARATH5.1e-4938.57E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE... [more]
SINL7_ARATH2.6e-3733.46E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=... [more]
SINL6_ARATH1.1e-3533.33Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g... [more]
SIL11_ARATH1.4e-3533.70E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE... [more]
SINL9_ARATH5.5e-3534.75Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g... [more]
BLAST of Cp4.1LG02g16780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9Z6_CUCSA1.6e-11071.38E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1[more]
V4UW18_9ROSI3.3e-6347.24E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1[more]
A0A067FAH4_CITSI3.3e-6347.24E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020280mg PE=3 SV=1[more]
W9S0Z7_9ROSA1.6e-6248.82E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1[more]
A0A061EGM7_THECC2.2e-6244.49E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1[more]
BLAST of Cp4.1LG02g16780 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37930.12.9e-5038.57 Protein with RING/U-box and TRAF-like domains[more]
AT5G37890.11.5e-3833.46 Protein with RING/U-box and TRAF-like domains[more]
AT5G37870.16.2e-3733.33 Protein with RING/U-box and TRAF-like domains[more]
AT5G62800.18.1e-3733.70 Protein with RING/U-box and TRAF-like domains[more]
AT5G37910.13.1e-3634.75 Protein with RING/U-box and TRAF-like domains[more]
BLAST of Cp4.1LG02g16780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778679778|ref|XP_004140738.2|2.3e-11071.38PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus][more]
gi|659114528|ref|XP_008457096.1|1.2e-7966.98PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumi... [more]
gi|470135025|ref|XP_004303331.1|5.1e-6551.64PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X3 [Fragaria vesca s... [more]
gi|764606792|ref|XP_011467109.1|5.1e-6551.64PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X1 [Fragaria vesca s... [more]
gi|764606798|ref|XP_011467110.1|5.1e-6551.64PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 isoform X2 [Fragaria vesca s... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO:0007275multicellular organism development
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR0181217-in-absentia-prot_TRAF-dom
IPR013323SIAH-type domain
IPR013083Znf_RING/FYVE/PHD
IPR013010Znf_SIAH
IPR008974TRAF-like
IPR004162SINA-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g16780.1Cp4.1LG02g16780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315SEVEN IN ABSENTIA HOMOLOGcoord: 10..267
score: 8.0
IPR008974TRAF-likeunknownSSF49599TRAF domain-likecoord: 92..254
score: 9.81
IPR013010Zinc finger, SIAH-typePROFILEPS51081ZF_SIAHcoord: 92..150
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 34..104
score: 1.
IPR013323SIAH-type domainGENE3DG3DSA:3.90.890.10coord: 105..145
score: 2.1
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 81..239
score: 1.2
NoneNo IPR availablePANTHERPTHR10315:SF43E3 UBIQUITIN-PROTEIN LIGASEcoord: 10..267
score: 8.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g16780Cla013155Watermelon (97103) v1cpewmB568
Cp4.1LG02g16780ClCG05G010790Watermelon (Charleston Gray)cpewcgB518
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g16780Cucurbita pepo (Zucchini)cpecpeB449
Cp4.1LG02g16780Cucumber (Gy14) v1cgycpeB0242
Cp4.1LG02g16780Cucumber (Gy14) v1cgycpeB0531
Cp4.1LG02g16780Cucurbita maxima (Rimu)cmacpeB279
Cp4.1LG02g16780Cucurbita maxima (Rimu)cmacpeB491
Cp4.1LG02g16780Cucurbita moschata (Rifu)cmocpeB241
Cp4.1LG02g16780Cucurbita moschata (Rifu)cmocpeB449
Cp4.1LG02g16780Wild cucumber (PI 183967)cpecpiB551
Cp4.1LG02g16780Cucumber (Chinese Long) v2cpecuB550
Cp4.1LG02g16780Bottle gourd (USVL1VR-Ls)cpelsiB470
Cp4.1LG02g16780Melon (DHL92) v3.5.1cpemeB529
Cp4.1LG02g16780Cucumber (Gy14) v2cgybcpeB380
Cp4.1LG02g16780Cucumber (Gy14) v2cgybcpeB383
Cp4.1LG02g16780Melon (DHL92) v3.6.1cpemedB630
Cp4.1LG02g16780Silver-seed gourdcarcpeB0256
Cp4.1LG02g16780Silver-seed gourdcarcpeB1072
Cp4.1LG02g16780Cucumber (Chinese Long) v3cpecucB0686
Cp4.1LG02g16780Cucumber (Chinese Long) v3cpecucB0689
Cp4.1LG02g16780Wax gourdcpewgoB0681