Cp4.1LG02g15310 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g15310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGermin-like protein subfamily 3 member 4
LocationCp4.1LG02 : 13447851 .. 13451085 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGCGAGGAAGAAGAATACGACCCATCTGGACCCGAGTGGTCTCGAAATATCCGCCATTGGAGATGGATAGGTAGATTCCTCATGACAATTTATCTTCTTTTTCGTTCACTCTTTTTTTCTTTTTCTTTTTTTTTCCGGAAATTTGTTTGACGTTTCATGATTCATCGTAAATAATTGCAATGATTATATATATAATATTAAAATACTTCTCCACAGTATTTTTACTTTCAAATATCTAATATTAATCCGAAAATTCGACCCCACTTATTTTAATGAATGTTTAACCTAAAGTATTCTCGGAGAATATGCCTCCTAACTTAGTGCTACGTGACGAATTTCATTCAAAGGAATCCAGTAAAGAAAAGCATGTAATTTTAGTAATTAAAAGGTTTATTGAGATGAATTAAATAATATTAATAATTTTCATACAAATATTTATTTTTTGACAAAGCTAATAATAAAATTAAAATACAAGAACTAACATGTTATTTTAATATTTAATTTTAGTCTATGTAGGTTGATAAATCAAGAAATTAATTCTTTAAGGTAAATTTTAAGATTAATTTTTTATTTTTTTTAAAAAGATTGGAAATATAATCAAATAAATTTATTAAAAGTACAATATGTTGATTATAGGAGGAAAATCGTATTTTATAATTATTATTTTATTTTATTTTATTCTGTTGGTTTTTAAATTTGAGTGAGAAATCCAGTTGGAATTGGGACCAGTTGATCGCTAGAACCTTCCAATTATAGCGACGCGTTTGGTTCATAAAATTCGAATTTCTCATCTTTTTCTCCAATTATCTTTTTTCTTTTTCAGGATTTATTATCTTTTTCCCGTTCTCTCTCTCTCTCTCTCTCTGAAAAAGACAGATTAGCGTGGGCTTCACCCAATTTTTATGAGTGGGCCTTTTGTTTCTTACAGTATTAACATGGGCTCGGCCCACAATTTCACTAACCAATACATTAATTTTTACGATTGGACCTTTTGTTTGTTACTGAATTAACTTGGGCTCGGCCCAACTTTTTATTAATCAATTCATTAATTTTTACGATTGGGCCTTTTGTTTGTTACTGAATTAACTTGGGCTCGGCCCATATTTTCATTAACCAATTCATTAATTTTTACGATTGGGCCTTTCGTTTGTTACTGTATTAACTTGGGCTCGGCCCACAATTTCATTAACCGATTCATTAATTTTTACAATTGGGCCGTTTGTTTGTTACTGTATTAACTTGGGCTCGGCCCACATATTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTTTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTCTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTCTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTCTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTCTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTCTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTCTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTCTCTTACTGTATTCACTTGGGCTCGGCCCACATTTTAATTAACCAATTCATTAATTTTTACGATTGGGCCTTTTGTTTGTTACTGTATTAACATGGGCTCGGCCCACATTTTCATTAACCAATTATTTACTTTACGATTGGGCCTTTTGTTTGTTACTGTATTAACATGGGCTTGGCCCACATATTTATTAATGAATTTATTAATTTTTATGATTGGGCCTTTTGTTTGTTACTTTATTAACTTGGGCTTGGCCCACATTTTCATTAACTTTTGTGATTGGGCCTTGTGTTTGTTACTGTATTTACTTGGGCTTGGCCCACATATTTATTAATCAATTCATTAATTTGTGATTGGGCTTTTTGTTTGTTACTGTATTACCTTGGGCTTGGCCCACAATCAACTACTTTTTGAAATTATAATTAATCAGAATTAATAAATTATTAATTTAGAAGGAAAAATATTTATTCATATTACCCATCACTAAATTTCATATTAATTTTGCTTTAAGCAATGCAGAAATCCAGTAGTAAACTCCAAGAATTAGGAAATTAATATCTTCCACTGTTGGCAACCTCAAAAACCTTACAATTCAAGCATATTTATATGTTTCATCCTAAATTCTCAGCTCGAACACATGAACTCAAAATGAACAAACCATCATCTTCCTTAATTTTCCTTCTGGTTGTGTTATTTTCTTGTCTTGGAATCTCAGTTGCTGATTCTCATAATGTCTTTGATTCTTGTCCAACAGCCACTGATAGAATTGACTTCATCAATGGCTTCCCTTGCAAGAACCCCACCATTGTTAGGACGGATGACTTCACCTCAGCAAAGTTAACGGGACCGGTCAATACCGATGATCGGTTCAGCTCGTTGGTGAAGGTCGTCACGGCTGCAGACTTCCCTGGCTTGAATTCACTCGGGCTATCTATCTCTAGAACTGATTTGGGCACGGATGCCATCATTTCTCCTCACTCGCATCCAAGAGCCACAGAGATGTTCTTTGTGAATCAAGGTACGTATTGGGTTGAGCGGTGATTTAACATGGTATTAGAGTAAGGAGTTGTGTGTTTGTCTTCCTTGCAGGCATCGTTCTAGCTGGATTCATTGACACCAAAAACCGACTCTTTCAGGAGTTTTTAAAACCAGGCGACGTAATCGTATTTCCAAAGGGGTTGTTGCACTTCTGTCTAAATTCTGGTTACGAGACCGCCACCATTTTCTCTGTGTATAACAGTCAGAACCCAGGAGTTGTGAATGTCAATGGTGCCATGTTCGAGCCTGCTGATTCAAGTCATTTCATAGACAAGTTCCTCGACAAATTAAAAGCTCTTTCTTCACTACCAAATCTCAAATTCAACCCAAATGTAACCCTACCCAGATACATAAGCTTGTAA

mRNA sequence

ATGGGCAGCGAGGAAGAAGAATACGACCCATCTGGACCCGAGTGGTCTCGAAATATCCGCCATTGGAGATGGATAGTTGCTGATTCTCATAATGTCTTTGATTCTTGTCCAACAGCCACTGATAGAATTGACTTCATCAATGGCTTCCCTTGCAAGAACCCCACCATTGTTAGGACGGATGACTTCACCTCAGCAAAGTTAACGGGACCGGTCAATACCGATGATCGGTTCAGCTCGTTGGTGAAGGAGTTTTTAAAACCAGGCGACGTAATCGTATTTCCAAAGGGGTTGTTGCACTTCTGTCTAAATTCTGGTTACGAGACCGCCACCATTTTCTCTGTGTATAACAGTCAGAACCCAGGAGTTGTGAATGTCAATGGTGCCATGTTCGAGCCTGCTGATTCAAGTCATTTCATAGACAAGTTCCTCGACAAATTAAAAGCTCTTTCTTCACTACCAAATCTCAAATTCAACCCAAATGTAACCCTACCCAGATACATAAGCTTGTAA

Coding sequence (CDS)

ATGGGCAGCGAGGAAGAAGAATACGACCCATCTGGACCCGAGTGGTCTCGAAATATCCGCCATTGGAGATGGATAGTTGCTGATTCTCATAATGTCTTTGATTCTTGTCCAACAGCCACTGATAGAATTGACTTCATCAATGGCTTCCCTTGCAAGAACCCCACCATTGTTAGGACGGATGACTTCACCTCAGCAAAGTTAACGGGACCGGTCAATACCGATGATCGGTTCAGCTCGTTGGTGAAGGAGTTTTTAAAACCAGGCGACGTAATCGTATTTCCAAAGGGGTTGTTGCACTTCTGTCTAAATTCTGGTTACGAGACCGCCACCATTTTCTCTGTGTATAACAGTCAGAACCCAGGAGTTGTGAATGTCAATGGTGCCATGTTCGAGCCTGCTGATTCAAGTCATTTCATAGACAAGTTCCTCGACAAATTAAAAGCTCTTTCTTCACTACCAAATCTCAAATTCAACCCAAATGTAACCCTACCCAGATACATAAGCTTGTAA

Protein sequence

MGSEEEEYDPSGPEWSRNIRHWRWIVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFTSAKLTGPVNTDDRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL
Homology
[Close]
BLAST of Cp4.1LG02g15310 vs. Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.4e-12
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNV 126
           D  + + +  L+ GDV VFPKGLLHFCL+ G+E AT FS YNSQNPGVVN+
Sbjct: 128 DTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNI 178

[Close]
BLAST of Cp4.1LG02g15310 vs. Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537350 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.9e-11
Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEP 133
           D    L ++ L  GDV +FP+GL+HF +N G+  AT FSV NSQNPGVV +  AMF P
Sbjct: 133 DTKGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAP 190

[Close]
BLAST of Cp4.1LG02g15310 vs. Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.8e-07
Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 1 

Query: 54  PTIVRTDDFTSAKLTGPVNTDDRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFS 113
           PT++    +    ++ P N       L  + L  GDV VFP+GL+HF  N+G   A   +
Sbjct: 124 PTVLEGSLYVGFVISNPEN------KLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALA 183

Query: 114 VYNSQNPGVVNVNGAMF--EPADSSHFIDK 142
             +SQNPGV+ V  A+F  +P+ S   + K
Sbjct: 184 ALSSQNPGVITVGNAVFGSKPSISDDILAK 207

[Close]
BLAST of Cp4.1LG02g15310 vs. Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1 

Query: 83  EFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 131
           + L PGDV VFP+GL+HF LN+G   A   +  +SQNPGV+ +  A+F
Sbjct: 150 KLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVF 197

[Close]
BLAST of Cp4.1LG02g15310 vs. Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 6.7e-07
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 1 

Query: 78  SSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 131
           + L+ + +  G+  VFPKGL+HF  N+G+E AT+ + +NSQ PG VN+   +F
Sbjct: 132 NQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLF 184

[Close]
BLAST of Cp4.1LG02g15310 vs. TrEMBL
Match: A0A0B2QBK6_GLYSO (Germin-like protein subfamily 3 member 4 OS=Glycine soja GN=glysoja_010641 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 66/170 (38.82%), Postives = 83/170 (48.82%), Query Frame = 1 

Query: 28  DSHNVFDSCPTA--TDRIDFINGFPCKNPTIVRTDDFTSAKLTGPVNTDDRFSSL----- 87
           D  N+ D+CP      +I FING  CKNP  V   DF + KL+    TD   +SL     
Sbjct: 16  DCDNLQDTCPAVPPNKQIIFINGLQCKNPVNVAAQDFRTTKLSKADLTDIFGASLKIVSA 75

Query: 88  ------------------------VKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYN 147
                                    ++FLK GDV VF K L HFCLN+G+E AT+FSVYN
Sbjct: 76  AEFNGLNTHGLSIGKTDLDGKGLYFQKFLKVGDVFVFHKALFHFCLNTGFEEATVFSVYN 135

Query: 148 SQNPGVVNVNGAMFEP---------ADSSHFID-KFLDKLKALSSLPNLK 157
           SQN G V+++   F+           DSSHF+  K   KL  +SSL N K
Sbjct: 136 SQNLGFVSLSPTTFDQHWSHWTRSRKDSSHFLPLKLKLKLSTVSSLQNWK 185

[Close]
BLAST of Cp4.1LG02g15310 vs. TrEMBL
Match: B9RA36_RICCO (Rhicadhesin receptor, putative OS=Ricinus communis GN=RCOM_1503010 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.5e-16
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 1 

Query: 63  TSAKLTGPVNTDDRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGV 122
           T   + G V+T+++   L + FLK GDV V P+GLLHFCLN+G + AT++SV NSQNPGV
Sbjct: 121 TGVVIAGFVDTNNQ---LFQSFLKEGDVFVVPRGLLHFCLNAGNDAATVYSVLNSQNPGV 180

Query: 123 VNVNGAMFEPADSSHFIDKFLDKLKALSSLPNLKFNPNVT 163
           VNV GAMFE       I+K ++++K+LS+   +K   NVT
Sbjct: 181 VNVAGAMFE--TEPDIINKLVERIKSLSA-SAIKAMENVT 214

[Close]
BLAST of Cp4.1LG02g15310 vs. TrEMBL
Match: W9QMR7_9ROSA (Germin-like protein subfamily 3 member 4 OS=Morus notabilis GN=L484_004627 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPAD 134
           D  S++ ++ L  GDVIVFPKGLLHFC N G++ AT FSV N QNPGVV+++GAM EP  
Sbjct: 133 DTKSNVFQDVLNEGDVIVFPKGLLHFCFNFGFDVATAFSVLNCQNPGVVSISGAMIEPDR 192

Query: 135 SSHFIDKFLDKLKALSSLPNLKFN---PNVTLPRYISL 170
               + + +  L +LS    L+ +    NVTLP++  L
Sbjct: 193 DVDTLGRLVKSLISLSKHNMLERHSNYQNVTLPKFPGL 230

[Close]
BLAST of Cp4.1LG02g15310 vs. TrEMBL
Match: B9I438_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s11330g PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14
Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPAD 134
           D  S L  + LKPG+V V P+GLLHF +N+G E A IFSV NSQNPGVV ++GA FEP D
Sbjct: 130 DTQSKLFSKILKPGEVFVVPQGLLHFFINTGDEAAVIFSVLNSQNPGVVKISGASFEP-D 189

Query: 135 SSHFIDKFLDKLKALSSL 153
               +DK + K+K+ ++L
Sbjct: 190 DEEMVDKLVRKIKSAAAL 206

[Close]
BLAST of Cp4.1LG02g15310 vs. TrEMBL
Match: V4TKE3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032668mg PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-14
Identity = 71/205 (34.63%), Postives = 93/205 (45.37%), Query Frame = 1 

Query: 27  ADSHNVFDSCPTATDRID--FINGFPCKNP---------------------------TIV 86
           AD  N+ D CPT T +    FING PCK+P                           T++
Sbjct: 20  ADFDNLQDICPTDTTKKQTIFINGLPCKSPDRIFASDFKSTKLRDAGDTDKFPYSSLTLL 79

Query: 87  RTDDF------------TSAKLTGPV--NTDDRFSSLVKEF------------------- 146
              DF            T   + G V  +T  R S ++  F                   
Sbjct: 80  TAADFPGLNTLGLSVARTDLDVDGMVVPHTHPRASEMLFVFKGVVIAGFVDTNRQVFQVM 139

Query: 147 LKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPADSSHFIDKFLD 170
           LK G+V VFP+GLLHF  N GYE AT+FSV NSQNPGVV+++ A F   D+   ID  + 
Sbjct: 140 LKAGEVCVFPRGLLHFGFNVGYEFATVFSVLNSQNPGVVSISDAAFSDFDT---IDDLVR 199

[Close]
BLAST of Cp4.1LG02g15310 vs. TAIR10
Match: AT5G61750.1 (AT5G61750.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNV 126
           D  + + +  L+ GDV VFPKGLLHFCL+ G+E AT FS YNSQNPGVVN+
Sbjct: 128 DTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNI 178

[Close]
BLAST of Cp4.1LG02g15310 vs. TAIR10
Match: AT3G04180.1 (AT3G04180.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 1 

Query: 69  GPVNTDDRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGA 128
           G V++++   +L  + L PGDV VFPKGL+HF  N G   A + S   SQ+PG + +  A
Sbjct: 131 GFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDA 190

Query: 129 MF 131
           +F
Sbjct: 191 VF 192

[Close]
BLAST of Cp4.1LG02g15310 vs. TAIR10
Match: AT5G38940.1 (AT5G38940.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1 

Query: 72  NTDDRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 131
           N D+R  S V   L  GDV VFP+GL+HF  N G   A  F+  +SQNPGV+ +   +F
Sbjct: 137 NPDNRLFSKV---LNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVF 192

[Close]
BLAST of Cp4.1LG02g15310 vs. TAIR10
Match: AT3G04200.1 (AT3G04200.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 34/93 (36.56%), Postives = 48/93 (51.61%), Query Frame = 1 

Query: 42  RIDFINGF---PCKNPTIVRTDDFTSAKL-TGPVNTDDRFSSLVKEFLKPGDVIVFPKGL 101
           R+DF  G    P  +P        T  KL  G V+++   + L  + LK GDV VFP GL
Sbjct: 101 RLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGL 160

Query: 102 LHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 131
           +HF +N     A  F+ + SQNPG + +  A+F
Sbjct: 161 IHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVF 193

[Close]
BLAST of Cp4.1LG02g15310 vs. TAIR10
Match: AT5G38960.1 (AT5G38960.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 1 

Query: 80  LVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 131
           L  + L  GDV VFP+GL+HF +N G + A  F+  +SQNPGV+ +   +F
Sbjct: 141 LFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLF 191

[Close]
BLAST of Cp4.1LG02g15310 vs. NCBI nr
Match: gi|659130983|ref|XP_008465454.1| (PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-30
Identity = 68/95 (71.58%), Postives = 75/95 (78.95%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPAD 134
           D  + L +  LK GDVIVFPKGLLHFCLNSGYE A  FSVYNSQNPGVVN+NGA+F+PAD
Sbjct: 135 DTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVNINGAVFDPAD 194

Query: 135 SSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 170
           SSHFI+KFL +L   SS  N K NPNVTL RY SL
Sbjct: 195 SSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

[Close]
BLAST of Cp4.1LG02g15310 vs. NCBI nr
Match: gi|778730818|ref|XP_004137644.2| (PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 5.7e-30
Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPAD 134
           D  + L +  LK GDVIVFPKGLLHF LNSGYE A  FSVYNSQNPGVVNVNGA+F+PAD
Sbjct: 135 DTRNQLFQTILKAGDVIVFPKGLLHFSLNSGYEPAIGFSVYNSQNPGVVNVNGAVFDPAD 194

Query: 135 SSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYIS 169
           SSHFI+KFL +LK  SS  N KFNPNVTL RY S
Sbjct: 195 SSHFIEKFLKRLKVPSSQSNFKFNPNVTLSRYTS 228

[Close]
BLAST of Cp4.1LG02g15310 vs. NCBI nr
Match: gi|734364281|gb|KHN17182.1| (Germin-like protein subfamily 3 member 4 [Glycine soja])

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17
Identity = 66/170 (38.82%), Postives = 83/170 (48.82%), Query Frame = 1 

Query: 28  DSHNVFDSCPTA--TDRIDFINGFPCKNPTIVRTDDFTSAKLTGPVNTDDRFSSL----- 87
           D  N+ D+CP      +I FING  CKNP  V   DF + KL+    TD   +SL     
Sbjct: 16  DCDNLQDTCPAVPPNKQIIFINGLQCKNPVNVAAQDFRTTKLSKADLTDIFGASLKIVSA 75

Query: 88  ------------------------VKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYN 147
                                    ++FLK GDV VF K L HFCLN+G+E AT+FSVYN
Sbjct: 76  AEFNGLNTHGLSIGKTDLDGKGLYFQKFLKVGDVFVFHKALFHFCLNTGFEEATVFSVYN 135

Query: 148 SQNPGVVNVNGAMFEP---------ADSSHFID-KFLDKLKALSSLPNLK 157
           SQN G V+++   F+           DSSHF+  K   KL  +SSL N K
Sbjct: 136 SQNLGFVSLSPTTFDQHWSHWTRSRKDSSHFLPLKLKLKLSTVSSLQNWK 185

[Close]
BLAST of Cp4.1LG02g15310 vs. NCBI nr
Match: gi|255539993|ref|XP_002511061.1| (PREDICTED: germin-like protein subfamily 3 member 4 [Ricinus communis])

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-15
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 1 

Query: 63  TSAKLTGPVNTDDRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGV 122
           T   + G V+T+++   L + FLK GDV V P+GLLHFCLN+G + AT++SV NSQNPGV
Sbjct: 121 TGVVIAGFVDTNNQ---LFQSFLKEGDVFVVPRGLLHFCLNAGNDAATVYSVLNSQNPGV 180

Query: 123 VNVNGAMFEPADSSHFIDKFLDKLKALSSLPNLKFNPNVT 163
           VNV GAMFE       I+K ++++K+LS+   +K   NVT
Sbjct: 181 VNVAGAMFE--TEPDIINKLVERIKSLSA-SAIKAMENVT 214

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BLAST of Cp4.1LG02g15310 vs. NCBI nr
Match: gi|1009136061|ref|XP_015885329.1| (PREDICTED: germin-like protein subfamily 3 member 4 [Ziziphus jujuba])

HSP 1 Score: 90.5 bits (223), Expect = 3.0e-15
Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 1 

Query: 75  DRFSSLVKEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPAD 134
           D  + L ++ L PGDV VFP+GLLHF LN+G++ AT FSV+NSQNPG V++NGAMF+P  
Sbjct: 205 DTNNQLFQKVLSPGDVFVFPRGLLHFSLNNGFDLATGFSVFNSQNPGKVSINGAMFQP-- 264

Query: 135 SSHFIDKFLDKLKALSSLPNLKFNPNVTLP 165
           +   IDK    + +LS +   +F  N+TLP
Sbjct: 265 NIEMIDKLKKTIISLSKIEANRFK-NLTLP 291

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g15310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL34_ARATH2.4e-1262.75Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE... [more]
GL111_ORYSJ5.9e-1153.45Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537350 PE=2 SV... [more]
GL22_ORYSJ1.8e-0734.44Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700... [more]
GL41_ORYSJ5.2e-0750.00Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=... [more]
RHRE_PEA6.7e-0743.40Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2[more]
BLAST of Cp4.1LG02g15310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B2QBK6_GLYSO1.3e-1738.82Germin-like protein subfamily 3 member 4 OS=Glycine soja GN=glysoja_010641 PE=4 ... [more]
B9RA36_RICCO9.5e-1650.00Rhicadhesin receptor, putative OS=Ricinus communis GN=RCOM_1503010 PE=3 SV=1[more]
W9QMR7_9ROSA1.0e-1446.94Germin-like protein subfamily 3 member 4 OS=Morus notabilis GN=L484_004627 PE=3 ... [more]
B9I438_POPTR1.8e-1453.85Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s11330g PE=3 SV=1[more]
V4TKE3_9ROSI1.8e-1434.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032668mg PE=3 SV=1[more]
BLAST of Cp4.1LG02g15310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G61750.11.3e-1362.75 RmlC-like cupins superfamily protein[more]
AT3G04180.11.1e-0741.94 RmlC-like cupins superfamily protein[more]
AT5G38940.11.1e-0745.76 RmlC-like cupins superfamily protein[more]
AT3G04200.11.1e-0736.56 RmlC-like cupins superfamily protein[more]
AT5G38960.11.9e-0745.10 RmlC-like cupins superfamily protein[more]
BLAST of Cp4.1LG02g15310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130983|ref|XP_008465454.1|2.5e-3071.58PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis melo][more]
gi|778730818|ref|XP_004137644.2|5.7e-3073.40PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis sativus][more]
gi|734364281|gb|KHN17182.1|1.9e-1738.82Germin-like protein subfamily 3 member 4 [Glycine soja][more]
gi|255539993|ref|XP_002511061.1|1.4e-1550.00PREDICTED: germin-like protein subfamily 3 member 4 [Ricinus communis][more]
gi|1009136061|ref|XP_015885329.1|3.0e-1551.11PREDICTED: germin-like protein subfamily 3 member 4 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
GO:0030145manganese ion binding
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf
IPR006045Cupin_1
IPR001929Germin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g15310.1Cp4.1LG02g15310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 83..103
score: 7.7E-11coord: 116..131
score: 7.7
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 69..128
score: 4.7
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 83..131
score: 6.88
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 82..135
score: 3.3
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 19..131
score: 6.4
NoneNo IPR availablePANTHERPTHR31238:SF3GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4coord: 19..131
score: 6.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g15310Cucsa.177470Cucumber (Gy14) v1cgycpeB0487
Cp4.1LG02g15310CmaCh01G002020Cucurbita maxima (Rimu)cmacpeB491
Cp4.1LG02g15310CmoCh01G002100Cucurbita moschata (Rifu)cmocpeB449
Cp4.1LG02g15310Cla017228Watermelon (97103) v1cpewmB539
Cp4.1LG02g15310ClCG10G012770Watermelon (Charleston Gray)cpewcgB486
Cp4.1LG02g15310CSPI03G30140Wild cucumber (PI 183967)cpecpiB546
Cp4.1LG02g15310Lsi03G012430Bottle gourd (USVL1VR-Ls)cpelsiB452
Cp4.1LG02g15310CsaV3_3G032610Cucumber (Chinese Long) v3cpecucB0684
Cp4.1LG02g15310Bhi11G001232Wax gourdcpewgoB0668
Cp4.1LG02g15310CsGy3G027950Cucumber (Gy14) v2cgybcpeB378
Cp4.1LG02g15310Carg07298Silver-seed gourdcarcpeB1072
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g15310Cucumber (Gy14) v2cgybcpeB946
Cp4.1LG02g15310Melon (DHL92) v3.6.1cpemedB592
Cp4.1LG02g15310Melon (DHL92) v3.6.1cpemedB615
Cp4.1LG02g15310Silver-seed gourdcarcpeB0285
Cp4.1LG02g15310Silver-seed gourdcarcpeB0495
Cp4.1LG02g15310Silver-seed gourdcarcpeB0633
Cp4.1LG02g15310Silver-seed gourdcarcpeB1146
Cp4.1LG02g15310Cucumber (Chinese Long) v3cpecucB0726
Cp4.1LG02g15310Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG02g15310Cucurbita pepo (Zucchini)cpecpeB332
Cp4.1LG02g15310Cucurbita pepo (Zucchini)cpecpeB449
Cp4.1LG02g15310Cucurbita maxima (Rimu)cmacpeB279
Cp4.1LG02g15310Cucurbita maxima (Rimu)cmacpeB399
Cp4.1LG02g15310Cucurbita moschata (Rifu)cmocpeB241
Cp4.1LG02g15310Cucurbita moschata (Rifu)cmocpeB361
Cp4.1LG02g15310Cucumber (Chinese Long) v2cpecuB545
Cp4.1LG02g15310Bottle gourd (USVL1VR-Ls)cpelsiB443
Cp4.1LG02g15310Watermelon (Charleston Gray)cpewcgB483
Cp4.1LG02g15310Watermelon (97103) v1cpewmB536
Cp4.1LG02g15310Melon (DHL92) v3.5.1cpemeB517