Carg07298 (gene) Silver-seed gourd

Overview
NameCarg07298
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGermin
LocationCucurbita_argyrosperma_scaffold_019 : 13405 .. 14176 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAACCATTATCTTCCTTAATTTTCCTTCTGGTTGTGTTTTTTTCTTGTCTTGGAATCTCGGTTGCTGATTCTCATAATGTCTTTGATTCTTGTCCAACAGCCACTGATAGAATTGACTTCATCAATGGCTTCCCTTGCAAGAACCCCACCATTGTTAGGACCGATGACTTCACCTCAGCAAAGTTAACGGGACCGGTCAATACTGATGATCGGTTCAGCTCGTTGGTGAAGGTCGTCACGGCTGCAGACTTCCCTGGCTTGAATTCGCTCGGGCTATCTATCTCTAGAACTGATTTGGGCACCGATGCCATCGTTTCTCCTCACTCACATCCGAGAGCCACGGAGATGTTCTTTGTGAATCAAGGTACGTATTGGGTTGAGCGGTGATTTAACATGGTATTAGAGTAAGGAGTTGTGTGTTTGTCTTCCTTGCAGGCATCGTTCTAGCTGGATTCATTGACACCAAAAACCGACTCTTTCAAGAGTTTTTAAAACCAGGCGACGTAATCGTATTTCCAAAGGGGTTGTTGCACTTCTGTCTGAATTCTGGTTATGAGACCGCCACCATTTTCTCTGTGTATAACAGTCAGAACCCAGGAGTTGTGAACGTCAATGGTGCCATGTTCGAGCCCGCTGATTCAAGTCATTTCATAGACAAGTTCCTCGACAAATTAAAAGCTCTTTCTTCACTACCCGATCTCAAATTCAACCCAAATGTAACTCTACCCAGATACATAAGCTTGTAAAATTATAGATTCGTTTGGAA

mRNA sequence

ATGAACAAACCATTATCTTCCTTAATTTTCCTTCTGGTTGTGTTTTTTTCTTGTCTTGGAATCTCGGTTGCTGATTCTCATAATGTCTTTGATTCTTGTCCAACAGCCACTGATAGAATTGACTTCATCAATGGCTTCCCTTGCAAGAACCCCACCATTGTTAGGACCGATGACTTCACCTCAGCAAAGTTAACGGGACCGGTCAATACTGATGATCGGTTCAGCTCGTTGGTGAAGGTCGTCACGGCTGCAGACTTCCCTGGCTTGAATTCGCTCGGGCTATCTATCTCTAGAACTGATTTGGGCACCGATGCCATCGTTTCTCCTCACTCACATCCGAGAGCCACGGAGATGTTCTTTGTGAATCAAGGCATCGTTCTAGCTGGATTCATTGACACCAAAAACCGACTCTTTCAAGAGTTTTTAAAACCAGGCGACGTAATCGTATTTCCAAAGGGGTTGTTGCACTTCTGTCTGAATTCTGGTTATGAGACCGCCACCATTTTCTCTGTGTATAACAGTCAGAACCCAGGAGTTGTGAACGTCAATGGTGCCATGTTCGAGCCCGCTGATTCAAGTCATTTCATAGACAAGTTCCTCGACAAATTAAAAGCTCTTTCTTCACTACCCGATCTCAAATTCAACCCAAATGTAACTCTACCCAGATACATAAGCTTGTAAAATTATAGATTCGTTTGGAA

Coding sequence (CDS)

ATGAACAAACCATTATCTTCCTTAATTTTCCTTCTGGTTGTGTTTTTTTCTTGTCTTGGAATCTCGGTTGCTGATTCTCATAATGTCTTTGATTCTTGTCCAACAGCCACTGATAGAATTGACTTCATCAATGGCTTCCCTTGCAAGAACCCCACCATTGTTAGGACCGATGACTTCACCTCAGCAAAGTTAACGGGACCGGTCAATACTGATGATCGGTTCAGCTCGTTGGTGAAGGTCGTCACGGCTGCAGACTTCCCTGGCTTGAATTCGCTCGGGCTATCTATCTCTAGAACTGATTTGGGCACCGATGCCATCGTTTCTCCTCACTCACATCCGAGAGCCACGGAGATGTTCTTTGTGAATCAAGGCATCGTTCTAGCTGGATTCATTGACACCAAAAACCGACTCTTTCAAGAGTTTTTAAAACCAGGCGACGTAATCGTATTTCCAAAGGGGTTGTTGCACTTCTGTCTGAATTCTGGTTATGAGACCGCCACCATTTTCTCTGTGTATAACAGTCAGAACCCAGGAGTTGTGAACGTCAATGGTGCCATGTTCGAGCCCGCTGATTCAAGTCATTTCATAGACAAGTTCCTCGACAAATTAAAAGCTCTTTCTTCACTACCCGATCTCAAATTCAACCCAAATGTAACTCTACCCAGATACATAAGCTTGTAA

Protein sequence

MNKPLSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL
Homology
[Close]
BLAST of Carg07298 vs. NCBI nr
Match: XP_022948659.1 (germin-like protein subfamily 3 member 4 [Cucurbita moschata] >XP_022948660.1 germin-like protein subfamily 3 member 4 [Cucurbita moschata])

HSP 1 Score: 452.2 bits (1162), Expect = 1.0e-123
Identity = 223/226 (98.67%), Postives = 225/226 (99.56%), Query Frame = 0 

Query: 1   MNKPLSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60
           MNKP SSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT
Sbjct: 1   MNKPSSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60

Query: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120
           SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF
Sbjct: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120

Query: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180

Query: 181 NVNGAMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL 227
           NVNGAMF+PADSSHFIDKFLDKLKALSSLP+LKFNPNVTLPRYISL
Sbjct: 181 NVNGAMFKPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]
BLAST of Carg07298 vs. NCBI nr
Match: XP_023522282.1 (germin-like protein subfamily 3 member 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.1 bits (1159), Expect = 2.3e-123
Identity = 222/226 (98.23%), Postives = 224/226 (99.12%), Query Frame = 0 

Query: 1   MNKPLSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60
           MNKP SSLIFLLVV FSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT
Sbjct: 15  MNKPSSSLIFLLVVLFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 74

Query: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120
           SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAI+SPHSHPRATEMFF
Sbjct: 75  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIISPHSHPRATEMFF 134

Query: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 135 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 194

Query: 181 NVNGAMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL 227
           NVNGAMFEPADSSHFIDKFLDKLKALSSLP+LKFNPNVTLPRYISL
Sbjct: 195 NVNGAMFEPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 240

[Close]
BLAST of Carg07298 vs. NCBI nr
Match: XP_022998490.1 (germin-like protein subfamily 3 member 4 [Cucurbita maxima])

HSP 1 Score: 448.4 bits (1152), Expect = 1.5e-122
Identity = 219/226 (96.90%), Postives = 224/226 (99.12%), Query Frame = 0 

Query: 1   MNKPLSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60
           MNKP SSLIFLL+VFFSCLGI+VADSHNVFDSCPTATDRIDF+NGFPCKNPT+VRTDDFT
Sbjct: 1   MNKPSSSLIFLLLVFFSCLGIAVADSHNVFDSCPTATDRIDFVNGFPCKNPTVVRTDDFT 60

Query: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120
           SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF
Sbjct: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120

Query: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV
Sbjct: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180

Query: 181 NVNGAMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL 227
           NVNGAMFEPADSSHFID FLDKLKALSSLP+LKFNPNVTLPRYISL
Sbjct: 181 NVNGAMFEPADSSHFIDMFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]
BLAST of Carg07298 vs. NCBI nr
Match: XP_022153439.1 (germin-like protein subfamily 3 member 4 [Momordica charantia])

HSP 1 Score: 369.8 bits (948), Expect = 6.7e-99
Identity = 183/228 (80.26%), Postives = 205/228 (89.91%), Query Frame = 0 

Query: 1   MNKP-LSSLIFLLV-VFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDD 60
           M KP  SSLIFLL+ V FSCLGISVADS+NVFD+CPTAT++ +FINGFPCKNPTIV T D
Sbjct: 1   MKKPSSSSLIFLLLFVLFSCLGISVADSNNVFDTCPTATNKSEFINGFPCKNPTIVTTSD 60

Query: 61  FTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEM 120
           F SAKLTGPV+TDD+F S V ++TAA+F GLN+LGLSISRTDLGTDAIVSPHSHPRATE+
Sbjct: 61  FNSAKLTGPVDTDDQFISSVNILTAAEFSGLNTLGLSISRTDLGTDAIVSPHSHPRATEI 120

Query: 121 FFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPG 180
           FFVNQGIVLAGF+DTKNRLFQ FLK GDV+VFPKGLLHFCLNSGYE A IFSV+NSQNPG
Sbjct: 121 FFVNQGIVLAGFLDTKNRLFQSFLKAGDVMVFPKGLLHFCLNSGYEPAIIFSVFNSQNPG 180

Query: 181 VVNVNGAMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL 227
           VVN+NGAMFEPADS+H + KFL++LK+LSSL  LKFNPNVTL  YISL
Sbjct: 181 VVNINGAMFEPADSNHLVHKFLERLKSLSSLSSLKFNPNVTLTTYISL 228

[Close]
BLAST of Carg07298 vs. NCBI nr
Match: XP_008465454.1 (PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92
Identity = 173/222 (77.93%), Postives = 194/222 (87.39%), Query Frame = 0 

Query: 6   SSLIFLLV-VFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFTSAKL 65
           SSLIFLL+ V FSCLGIS+ADS+NVFD+CPTATDRI+FING+ CK+PT+V T DF SAKL
Sbjct: 8   SSLIFLLLFVLFSCLGISLADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTSDFNSAKL 67

Query: 66  TGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQG 125
           T PVNTDDR + +VK+VTAADF GLN+LGLSISRTDL  DAIVSPHSHPRATEMFF+NQG
Sbjct: 68  TEPVNTDDRINLVVKIVTAADFHGLNTLGLSISRTDLVIDAIVSPHSHPRATEMFFLNQG 127

Query: 126 IVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNG 185
           IVLAGFIDT+N+LFQ  LK GDVIVFPKGLLHFCLNSGYE A  FSVYNSQNPGVVN+NG
Sbjct: 128 IVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVNING 187

Query: 186 AMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL 227
           A+F+PADSSHFI+KFL +L   SS  + K NPNVTL RY SL
Sbjct: 188 AVFDPADSSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

[Close]
BLAST of Carg07298 vs. TAIR10
Match: AT5G61750.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-53
Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 0 

Query: 10  FLLVVFFSCLGISVA-DSHNVFDSCPTA--TDRIDFINGFPCKNPTIVRTDDFTSAKLTG 69
           F +V+ F  + +SV+ DS N+ D+CPTA     I FING+PCKNPT +   DF S KLT 
Sbjct: 3   FFVVIVFCAIFLSVSGDSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTE 62

Query: 70  PVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQGIV 129
             +TD+   S V ++TA +FPGLN+LGLS+SRTDL  D  V  HSHPR++EM FV +G+V
Sbjct: 63  AGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVV 122

Query: 130 LAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNV 183
            AGF+DT N++FQ  L+ GDV VFPKGLLHFCL+ G+E AT FS YNSQNPGVVN+
Sbjct: 123 FAGFVDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNI 178

[Close]
BLAST of Carg07298 vs. TAIR10
Match: AT1G09560.1 (germin-like protein 5)

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-32
Identity = 77/189 (40.74%), Postives = 105/189 (55.56%), Query Frame = 0 

Query: 1   MNKPLSSLIFLL--VVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDD 60
           M  P  +L+ LL  V FF     S AD   + D C         INGFPCK+   V + D
Sbjct: 1   MASPTLTLLLLLTTVSFFIS---SSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSAD 60

Query: 61  FTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEM 120
           F S  L  P  T++ F +LV        PGLN+LG+S+SR D     +  PH+HPRATE+
Sbjct: 61  FFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEV 120

Query: 121 FFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPG 180
            FV +G +  GF+ T N+L  + LK GDV  FPKGL+HF  N+G   A++ + +NSQ PG
Sbjct: 121 VFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPG 180

Query: 181 VVNVNGAMF 188
             ++   +F
Sbjct: 181 TQSLGATLF 186

[Close]
BLAST of Carg07298 vs. TAIR10
Match: AT1G72610.1 (germin-like protein 1)

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-31
Identity = 71/179 (39.66%), Postives = 103/179 (57.54%), Query Frame = 0 

Query: 9   IFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFTSAKLTGPV 68
           IFLL + F+    SV       D C     R +   G+PC  P  V+  DF  + L  P 
Sbjct: 5   IFLLSLLFALSNASVQ------DFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPG 64

Query: 69  NTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQGIVLA 128
           NT +  ++ V    AA FPGLN LGLS +R DL    ++  H+HP A+E+ FV  G + A
Sbjct: 65  NTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITA 124

Query: 129 GFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 188
           GF+ + N ++ + LKPG V+VFP+GLLHF +N+G  +A+    +NS NPG+  ++ A+F
Sbjct: 125 GFVSSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALF 177

[Close]
BLAST of Carg07298 vs. TAIR10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor)

HSP 1 Score: 127.9 bits (320), Expect = 8.1e-30
Identity = 74/213 (34.74%), Postives = 109/213 (51.17%), Query Frame = 0 

Query: 1   MNKPLSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFT 60
           MN  +S +I L  +  +   I   D   + D C         +NGFPCK    +   DF 
Sbjct: 2   MNSRISIIIALSCIMIT--SIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFF 61

Query: 61  SAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFF 120
            A ++ P   +    S V        PGLN+L +S++R D     +  PH+HPRATE+ +
Sbjct: 62  FAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVY 121

Query: 121 VNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVV 180
           V +G +  GFI T N+LF + +K G+V VFP+GL+HF  N+G   A++ S +NSQ PG  
Sbjct: 122 VLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTA 181

Query: 181 NVNGAMF--EPADSSHFI-------DKFLDKLK 205
           +V   +F  EPA     +        K +DK+K
Sbjct: 182 SVAATLFAAEPALPEDVLTKTFQVGSKMVDKIK 212

[Close]
BLAST of Carg07298 vs. TAIR10
Match: AT3G05950.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29
Identity = 69/171 (40.35%), Postives = 95/171 (55.56%), Query Frame = 0 

Query: 21  ISVADSHNVFDSCPTATDRID-FINGFPCKNPTIVRTDDFTSAKLTGPVNTDDRFSSLVK 80
           +S  D   + D C    D    F+NG  CK+P  V+ +DF ++ L    NT +R  S V 
Sbjct: 22  VSCYDPSPLQDFCVAVDDASGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVT 81

Query: 81  VVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQGIVLAGFIDT---KNR 140
            V     PGLN+LG+S+ R D        PH+HPRATE+  V +G +L GF+ +    NR
Sbjct: 82  NVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNR 141

Query: 141 LFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 188
           LF + L PGDV VFP G++HF +N G   A  F+   SQNPG + +  A+F
Sbjct: 142 LFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVF 192

[Close]
BLAST of Carg07298 vs. Swiss-Prot
Match: sp|Q9FLT3|GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana OX=3702 GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.2e-52
Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 0 

Query: 10  FLLVVFFSCLGISVA-DSHNVFDSCPTA--TDRIDFINGFPCKNPTIVRTDDFTSAKLTG 69
           F +V+ F  + +SV+ DS N+ D+CPTA     I FING+PCKNPT +   DF S KLT 
Sbjct: 3   FFVVIVFCAIFLSVSGDSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTE 62

Query: 70  PVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQGIV 129
             +TD+   S V ++TA +FPGLN+LGLS+SRTDL  D  V  HSHPR++EM FV +G+V
Sbjct: 63  AGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVV 122

Query: 130 LAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNV 183
            AGF+DT N++FQ  L+ GDV VFPKGLLHFCL+ G+E AT FS YNSQNPGVVN+
Sbjct: 123 FAGFVDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNI 178

[Close]
BLAST of Carg07298 vs. Swiss-Prot
Match: sp|Q2R352|GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0537350 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.7e-43
Identity = 84/169 (49.70%), Postives = 114/169 (67.46%), Query Frame = 0 

Query: 23  VADSHNVFDSCPTAT--DRIDFINGFPCKNPTIVRTDDFTSAKLTGPVNTDDRFSSLVKV 82
           ++DS  + D CP A   +R  F+NGF CK+P+ +   DF +  L    + D+   S   +
Sbjct: 22  ISDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANI 81

Query: 83  VTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQGIVLAGFIDTKNRLFQE 142
           +TA +FPGLN+LG+S++RTD+     V PHSHPRA+EM FV+ G V+AGF DTK +LFQ+
Sbjct: 82  ITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGKLFQK 141

Query: 143 FLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMFEP 190
            L  GDV +FP+GL+HF +N G+  AT FSV NSQNPGVV +  AMF P
Sbjct: 142 TLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAP 190

[Close]
BLAST of Carg07298 vs. Swiss-Prot
Match: sp|P45852|GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-31
Identity = 70/160 (43.75%), Postives = 93/160 (58.13%), Query Frame = 0 

Query: 42  FINGFPCKNPTIVRTDDFTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDL 101
           F+NG  CK+P  V  DDF    L  P NTD+       +VTAA+ PGLN+LG+S++R D 
Sbjct: 43  FVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDF 102

Query: 102 GTDAIVSPHSHPRATEMFFVNQGIVLAGFI-----DTKNRLFQEFLKPGDVIVFPKGLLH 161
               +  PH+HPRATE+F V +G    GF+     D  N+LF + L  GDV VFP+GL+H
Sbjct: 103 APHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIH 162

Query: 162 FCLNSGYETATIFSVYNSQNPGVVNVNGAMFEPADSSHFI 197
           F LN G       S  +SQNPGV+ +  A+F P   S  +
Sbjct: 163 FQLNIGNYPGVGISGLSSQNPGVITIANAVFGPEHLSQLM 202

[Close]
BLAST of Carg07298 vs. Swiss-Prot
Match: sp|P94014|GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 9.1e-31
Identity = 77/189 (40.74%), Postives = 105/189 (55.56%), Query Frame = 0 

Query: 1   MNKPLSSLIFLL--VVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDD 60
           M  P  +L+ LL  V FF     S AD   + D C         INGFPCK+   V + D
Sbjct: 1   MASPTLTLLLLLTTVSFFIS---SSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSAD 60

Query: 61  FTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEM 120
           F S  L  P  T++ F +LV        PGLN+LG+S+SR D     +  PH+HPRATE+
Sbjct: 61  FFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEV 120

Query: 121 FFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPG 180
            FV +G +  GF+ T N+L  + LK GDV  FPKGL+HF  N+G   A++ + +NSQ PG
Sbjct: 121 VFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPG 180

Query: 181 VVNVNGAMF 188
             ++   +F
Sbjct: 181 TQSLGATLF 186

[Close]
BLAST of Carg07298 vs. Swiss-Prot
Match: sp|P94040|GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.5e-30
Identity = 71/179 (39.66%), Postives = 103/179 (57.54%), Query Frame = 0 

Query: 9   IFLLVVFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFTSAKLTGPV 68
           IFLL + F+    SV       D C     R +   G+PC  P  V+  DF  + L  P 
Sbjct: 5   IFLLSLLFALSNASVQ------DFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPG 64

Query: 69  NTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQGIVLA 128
           NT +  ++ V    AA FPGLN LGLS +R DL    ++  H+HP A+E+ FV  G + A
Sbjct: 65  NTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITA 124

Query: 129 GFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNGAMF 188
           GF+ + N ++ + LKPG V+VFP+GLLHF +N+G  +A+    +NS NPG+  ++ A+F
Sbjct: 125 GFVSSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALF 177

[Close]
BLAST of Carg07298 vs. TrEMBL
Match: tr|A0A1S3CNX7|A0A1S3CNX7_CUCME (germin-like protein subfamily 3 member 4 OS=Cucumis melo OX=3656 GN=LOC103503059 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.4e-92
Identity = 173/222 (77.93%), Postives = 194/222 (87.39%), Query Frame = 0 

Query: 6   SSLIFLLV-VFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTDDFTSAKL 65
           SSLIFLL+ V FSCLGIS+ADS+NVFD+CPTATDRI+FING+ CK+PT+V T DF SAKL
Sbjct: 8   SSLIFLLLFVLFSCLGISLADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTSDFNSAKL 67

Query: 66  TGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVNQG 125
           T PVNTDDR + +VK+VTAADF GLN+LGLSISRTDL  DAIVSPHSHPRATEMFF+NQG
Sbjct: 68  TEPVNTDDRINLVVKIVTAADFHGLNTLGLSISRTDLVIDAIVSPHSHPRATEMFFLNQG 127

Query: 126 IVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNVNG 185
           IVLAGFIDT+N+LFQ  LK GDVIVFPKGLLHFCLNSGYE A  FSVYNSQNPGVVN+NG
Sbjct: 128 IVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVNING 187

Query: 186 AMFEPADSSHFIDKFLDKLKALSSLPDLKFNPNVTLPRYISL 227
           A+F+PADSSHFI+KFL +L   SS  + K NPNVTL RY SL
Sbjct: 188 AVFDPADSSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

[Close]
BLAST of Carg07298 vs. TrEMBL
Match: tr|A0A2N9ENN9|A0A2N9ENN9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4091 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.1e-60
Identity = 123/205 (60.00%), Postives = 154/205 (75.12%), Query Frame = 0 

Query: 5   LSSLIFLLVVFFSCLGISVADSHNVFDSCPTAT--DRIDFINGFPCKNPTIVRTDDFTSA 64
           ++S I L +V FSC+GIS+AD  N+ D+CPTAT   +  FINGF CKNP  V   DF ++
Sbjct: 1   MNSCIPLCIVIFSCIGISLADFDNLQDTCPTATPGKQTVFINGFACKNPANVTASDFKTS 60

Query: 65  KLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVN 124
            L  P +T + +SS V +VTAADFPGLN+LGLSI+RTD+    +V PHSHPRA+E+FFV+
Sbjct: 61  NLNHPGDTSNFYSSAVTIVTAADFPGLNTLGLSIARTDIEAAGLVLPHSHPRASELFFVS 120

Query: 125 QGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNV 184
           QG V+AGFIDT N++FQ  LK GDV VFP+GLLHFC N G+E ATIFSV NSQNPGVV +
Sbjct: 121 QGNVVAGFIDTNNKVFQRVLKEGDVFVFPRGLLHFCYNLGFELATIFSVLNSQNPGVVTL 180

Query: 185 NGAMFEPADSSHFIDKFLDKLKALS 208
           NGAMFE + S   +DK L +L +LS
Sbjct: 181 NGAMFE-SHSDIVLDKQLRRLLSLS 204

[Close]
BLAST of Carg07298 vs. TrEMBL
Match: tr|A0A2P5FRQ5|A0A2P5FRQ5_9ROSA (Germin OS=Trema orientalis OX=63057 GN=TorRG33x02_035690 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58
Identity = 129/232 (55.60%), Postives = 157/232 (67.67%), Query Frame = 0 

Query: 4   PLSSLIFLLVVFFSCLGISVADSHNVFDSCPTATDRID-----FINGFPCKNPTIVRTDD 63
           PLS  IF L   FS + + +AD  N+ D+CP AT  +D     FING PCKNPT +   D
Sbjct: 7   PLS--IFFL---FSMIKLCLADCDNLQDTCPAATTPLDKKQTVFINGHPCKNPTTISAPD 66

Query: 64  FTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEM 123
           F S++L  P  TD    S VK+VTAADFPGLN+LGLSI+RTDL  D +V PHSHPRATEM
Sbjct: 67  FKSSELINPGATDIFARSSVKIVTAADFPGLNTLGLSIARTDLELDGLVIPHSHPRATEM 126

Query: 124 FFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPG 183
           FFV +GIVLAGFIDTK+ +FQ  LK GDVIVFP+GLLHFC N G++ A +FSV NSQNPG
Sbjct: 127 FFVKKGIVLAGFIDTKSNVFQNVLKEGDVIVFPRGLLHFCFNIGFDDAIVFSVLNSQNPG 186

Query: 184 VVNVNGAMFEPADSSHFIDKFLDKLKALSSLPDLKFN----PNVTLPRYISL 227
           VV+++GAMFEP        K   +L + S    L+       NVTL ++ SL
Sbjct: 187 VVSISGAMFEPDHDFELTGKLAKRLISFSKRGPLENQSNSYQNVTLLKFPSL 233

[Close]
BLAST of Carg07298 vs. TrEMBL
Match: tr|A0A2P5FRW5|A0A2P5FRW5_9ROSA (Germin OS=Trema orientalis OX=63057 GN=TorRG33x02_035730 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 123/228 (53.95%), Postives = 156/228 (68.42%), Query Frame = 0 

Query: 10  FLLVVFF--SCLGISVADSHNVFDSCPTAT-----DRIDFINGFPCKNPTIVRTDDFTSA 69
           F L +FF  S + + +AD  N+ D+CP AT      +  FING PCK+PT +   DF S+
Sbjct: 6   FPLSIFFLLSMIKLCLADCDNLQDTCPAATTPPGKKQAVFINGLPCKHPTTISAPDFKSS 65

Query: 70  KLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVN 129
           +L  P  TD    S VK+VTAADFPGLN+LGLSI+RTDL  D +V PHSHPRATEMFFV 
Sbjct: 66  ELINPGATDIFARSSVKIVTAADFPGLNTLGLSIARTDLELDGLVMPHSHPRATEMFFVK 125

Query: 130 QGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNV 189
           +GIVLAGFIDTK+ +FQ  LK GDVIVFP+GLLHFC N+G++ A +FSV NSQNPGVV +
Sbjct: 126 KGIVLAGFIDTKSNVFQNVLKEGDVIVFPRGLLHFCFNTGFDDAIVFSVLNSQNPGVVGI 185

Query: 190 NGAMFEPADSSHFIDKFLDKLKALSSLPDLKFNP----NVTLPRYISL 227
           +GA FEP  +   + K   +L + S    L+  P    NVT+ ++ SL
Sbjct: 186 SGAFFEPDHNFEIMGKLAKRLISFSKRDLLENQPNYYQNVTMLKFPSL 233

[Close]
BLAST of Carg07298 vs. TrEMBL
Match: tr|A0A2K1XLD4|A0A2K1XLD4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G109600v3 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.2e-57
Identity = 110/203 (54.19%), Postives = 153/203 (75.37%), Query Frame = 0 

Query: 5   LSSLIFLLVVFFSCLGISVADSHNVFDSCPTAT--DRIDFINGFPCKNPTIVRTDDFTSA 64
           ++S +F  +   +C+ I +AD+ N+ D+CPTAT   +  FINGFPCKNP  +   DF S+
Sbjct: 1   MNSALFFCIFLSTCINICLADTDNLQDTCPTATTDKQTVFINGFPCKNPNSIVASDFKSS 60

Query: 65  KLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATEMFFVN 124
           KL+ P +TD+   S V   TAADFPGLN+LGLSI+RTDL  D ++ PHSHPRA+EMFFV+
Sbjct: 61  KLSRPGDTDNYLHSSVTFNTAADFPGLNTLGLSIARTDLEFDGLMMPHSHPRASEMFFVS 120

Query: 125 QGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNPGVVNV 184
           +G+V+AGFIDT+N+LFQ+ L+PG+V VFP+GLLHFC+N+G+ +A +FSV NSQNPG VN+
Sbjct: 121 KGVVIAGFIDTQNKLFQKTLQPGEVFVFPQGLLHFCVNNGFNSAVVFSVLNSQNPGTVNI 180

Query: 185 NGAMFEPADSSHFIDKFLDKLKA 206
             AM E  D +  ++K + K+K+
Sbjct: 181 ADAMLEFDDDT--LNKLVRKIKS 201

The following BLAST results are available for this feature:
BLAST of Carg07298 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948659.11.0e-12398.67germin-like protein subfamily 3 member 4 [Cucurbita moschata] >XP_022948660.1 ge... [more]
XP_023522282.12.3e-12398.23germin-like protein subfamily 3 member 4 [Cucurbita pepo subsp. pepo][more]
XP_022998490.11.5e-12296.90germin-like protein subfamily 3 member 4 [Cucurbita maxima][more]
XP_022153439.16.7e-9980.26germin-like protein subfamily 3 member 4 [Momordica charantia][more]
XP_008465454.12.1e-9277.93PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis melo][more]
BLAST of Carg07298 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G61750.11.8e-5357.95RmlC-like cupins superfamily protein[more]
AT1G09560.15.0e-3240.74germin-like protein 5[more]
AT1G72610.12.5e-3139.66germin-like protein 1[more]
AT1G02335.18.1e-3034.74germin-like protein subfamily 2 member 2 precursor[more]
AT3G05950.12.3e-2940.35RmlC-like cupins superfamily protein[more]
BLAST of Carg07298 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FLT3|GL34_ARATH3.2e-5257.95Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana OX=3702 GN=At5g... [more]
sp|Q2R352|GL111_ORYSJ2.7e-4349.70Germin-like protein 11-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g053735... [more]
sp|P45852|GLP1_MESCR1.1e-3143.75Germin-like protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1[more]
sp|P94014|GL21_ARATH9.1e-3140.74Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4... [more]
sp|P94040|GL31_ARATH4.5e-3039.66Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP1... [more]
BLAST of Carg07298 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CNX7|A0A1S3CNX7_CUCME1.4e-9277.93germin-like protein subfamily 3 member 4 OS=Cucumis melo OX=3656 GN=LOC103503059... [more]
tr|A0A2N9ENN9|A0A2N9ENN9_FAGSY4.1e-6060.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4091 PE=3 SV=1[more]
tr|A0A2P5FRQ5|A0A2P5FRQ5_9ROSA1.0e-5855.60Germin OS=Trema orientalis OX=63057 GN=TorRG33x02_035690 PE=3 SV=1[more]
tr|A0A2P5FRW5|A0A2P5FRW5_9ROSA1.1e-5753.95Germin OS=Trema orientalis OX=63057 GN=TorRG33x02_035730 PE=3 SV=1[more]
tr|A0A2K1XLD4|A0A2K1XLD4_POPTR7.2e-5754.19Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G109600v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
GO:0030145manganese ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR006045Cupin_1
IPR001929Germin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg07298-RACarg07298-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 173..188
score: 41.42
coord: 140..160
score: 51.38
coord: 110..130
score: 53.38
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 75..188
e-value: 3.5E-19
score: 79.7
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 69..185
e-value: 6.2E-30
score: 103.7
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 24..206
e-value: 8.6E-53
score: 180.8
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 6..208
NoneNo IPR availablePANTHERPTHR31238:SF3GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4coord: 6..208
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
IPR011051RmlC-like cupin domain superfamilySUPERFAMILYSSF51182RmlC-like cupinscoord: 58..184