Cp4.1LG02g13070 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAACGCTTACTTTCCTGTTCTATCTCTCTTCATTCACATTTCTTTCCATCGTCCGAGCTGAAGGCAGAGCCCCTCATGGCCTGGTATACGAGAACCCGGTGGCGTTCTCTCCAATGGCATATGATTTCTTCCATCCAAGAACCCGGAGTCCCAATGCCGAAGACCCATGTGGTGCATCCAAATGCTCCCCTTTGCCCCTTGCAGCTCAACTGCAATCTAAACCTGCACAAGAAAGCAAATACTCCACAACAACTCAGAAAGGTGAGGGGGTTGGTGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTGTTTTTGGCGATGGGGGTGTACTATGTACTACGTACCCGCCTAGCCAACGCAAACCGAGCCATGTCTGCAAAACCTGGTGCTTGA ATGGCTCAAACGCTTACTTTCCTGTTCTATCTCTCTTCATTCACATTTCTTTCCATCGTCCGAGCTGAAGGCAGAGCCCCTCATGGCCTGGTATACGAGAACCCGGTGGCGTTCTCTCCAATGGCATATGATTTCTTCCATCCAAGAACCCGGAGTCCCAATGCCGAAGACCCATGTGGTGCATCCAAATGCTCCCCTTTGCCCCTTGCAGCTCAACTGCAATCTAAACCTGCACAAGAAAGCAAATACTCCACAACAACTCAGAAAGGTGAGGGGGTTGGTGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTGTTTTTGGCGATGGGGGTGTACTATGTACTACGTACCCGCCTAGCCAACGCAAACCGAGCCATGTCTGCAAAACCTGGTGCTTGA ATGGCTCAAACGCTTACTTTCCTGTTCTATCTCTCTTCATTCACATTTCTTTCCATCGTCCGAGCTGAAGGCAGAGCCCCTCATGGCCTGGTATACGAGAACCCGGTGGCGTTCTCTCCAATGGCATATGATTTCTTCCATCCAAGAACCCGGAGTCCCAATGCCGAAGACCCATGTGGTGCATCCAAATGCTCCCCTTTGCCCCTTGCAGCTCAACTGCAATCTAAACCTGCACAAGAAAGCAAATACTCCACAACAACTCAGAAAGGTGAGGGGGTTGGTGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCTGTGTTTTTGGCGATGGGGGTGTACTATGTACTACGTACCCGCCTAGCCAACGCAAACCGAGCCATGTCTGCAAAACCTGGTGCTTGA MAQTLTFLFYLSSFTFLSIVRAEGRAPHGLVYENPVAFSPMAYDFFHPRTRSPNAEDPCGASKCSPLPLAAQLQSKPAQESKYSTTTQKGEGVGGILGIVFGITFAVFLAMGVYYVLRTRLANANRAMSAKPGA
BLAST of Cp4.1LG02g13070 vs. TrEMBL
Match: A0A0A0LV85_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G495260 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 3.6e-50 Identity = 105/133 (78.95%), Postives = 115/133 (86.47%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. TrEMBL
Match: A0A061GY53_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_042052 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 1.2e-34 Identity = 78/130 (60.00%), Postives = 95/130 (73.08%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. TrEMBL
Match: A0A0D2QDG4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G107100 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 5.2e-33 Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. TrEMBL
Match: U5GGS3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s22050g PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.2e-32 Identity = 78/131 (59.54%), Postives = 91/131 (69.47%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. TrEMBL
Match: F6GU05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02860 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.8e-31 Identity = 75/134 (55.97%), Postives = 92/134 (68.66%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. TAIR10
Match: AT2G28410.1 (AT2G28410.1 unknown protein) HSP 1 Score: 95.1 bits (235), Expect = 3.4e-20 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. TAIR10
Match: AT5G60650.1 (AT5G60650.1 unknown protein) HSP 1 Score: 77.8 bits (190), Expect = 5.7e-15 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. NCBI nr
Match: gi|659115379|ref|XP_008457527.1| (PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]) HSP 1 Score: 210.3 bits (534), Expect = 2.1e-51 Identity = 107/133 (80.45%), Postives = 117/133 (87.97%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. NCBI nr
Match: gi|778661360|ref|XP_011657962.1| (PREDICTED: uncharacterized protein LOC105435923 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 5.1e-50 Identity = 105/133 (78.95%), Postives = 115/133 (86.47%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. NCBI nr
Match: gi|590590455|ref|XP_007016739.1| (Uncharacterized protein TCM_042052 [Theobroma cacao]) HSP 1 Score: 154.1 bits (388), Expect = 1.8e-34 Identity = 78/130 (60.00%), Postives = 95/130 (73.08%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. NCBI nr
Match: gi|657952768|ref|XP_008359212.1| (PREDICTED: uncharacterized protein LOC103422926 [Malus domestica]) HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33 Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 1
BLAST of Cp4.1LG02g13070 vs. NCBI nr
Match: gi|694382081|ref|XP_009367075.1| (PREDICTED: uncharacterized protein LOC103956771 [Pyrus x bretschneideri]) HSP 1 Score: 149.4 bits (376), Expect = 4.3e-33 Identity = 75/134 (55.97%), Postives = 97/134 (72.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |