Carg21028 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCAAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTCACATTTCTTTCCATCGCCCAAGCCGAAGGCAGAGCCCCGCACGGCTTGGTATACGAGAGCCCGGTTGCCTTCTCCCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGACTCCCAATGCCAAAGATCCATGTGGTGCATCCAAATGCTCCCCACTGCCCCTTGCAGCTCAAGTGCAATCTACTCCTGCAAAAGAAAGCAAATACTCCACAACAATCCAGAAAGGCACGCACCGTGTCGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCAGTGTTTTTGGCAATGGGAGTATACTATGTACTACGTACTCGCCAAGCCAACGCAAACCGAGCTATGTCAGCACAACCTAGTGTTTGA ATGACTCAAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTCACATTTCTTTCCATCGCCCAAGCCGAAGGCAGAGCCCCGCACGGCTTGGTATACGAGAGCCCGGTTGCCTTCTCCCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGACTCCCAATGCCAAAGATCCATGTGGTGCATCCAAATGCTCCCCACTGCCCCTTGCAGCTCAAGTGCAATCTACTCCTGCAAAAGAAAGCAAATACTCCACAACAATCCAGAAAGGCACGCACCGTGTCGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCAGTGTTTTTGGCAATGGGAGTATACTATGTACTACGTACTCGCCAAGCCAACGCAAACCGAGCTATGTCAGCACAACCTAGTGTTTGA ATGACTCAAATGCTTACTTTCCTGTTCTGTCTCTCTTCCTTCACATTTCTTTCCATCGCCCAAGCCGAAGGCAGAGCCCCGCACGGCTTGGTATACGAGAGCCCGGTTGCCTTCTCCCCAATGGCATATGATTTCTTCCATCCAAGCACCCAGACTCCCAATGCCAAAGATCCATGTGGTGCATCCAAATGCTCCCCACTGCCCCTTGCAGCTCAAGTGCAATCTACTCCTGCAAAAGAAAGCAAATACTCCACAACAATCCAGAAAGGCACGCACCGTGTCGGGGCTGGGGGGATTCTGGGAATTGTGTTTGGCATCACATTTGCAGTGTTTTTGGCAATGGGAGTATACTATGTACTACGTACTCGCCAAGCCAACGCAAACCGAGCTATGTCAGCACAACCTAGTGTTTGA MTQMLTFLFCLSSFTFLSIAQAEGRAPHGLVYESPVAFSPMAYDFFHPSTQTPNAKDPCGASKCSPLPLAAQVQSTPAKESKYSTTIQKGTHRVGAGGILGIVFGITFAVFLAMGVYYVLRTRQANANRAMSAQPSV
BLAST of Carg21028 vs. NCBI nr
Match: XP_008457527.1 (PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]) HSP 1 Score: 245.7 bits (626), Expect = 8.9e-62 Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of Carg21028 vs. NCBI nr
Match: XP_022158643.1 (uncharacterized protein LOC111025099 [Momordica charantia]) HSP 1 Score: 233.8 bits (595), Expect = 3.5e-58 Identity = 116/135 (85.93%), Postives = 124/135 (91.85%), Query Frame = 0
BLAST of Carg21028 vs. NCBI nr
Match: XP_023524574.1 (uncharacterized protein LOC111788471 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.3 bits (560), Expect = 4.0e-54 Identity = 114/135 (84.44%), Postives = 122/135 (90.37%), Query Frame = 0
BLAST of Carg21028 vs. NCBI nr
Match: XP_022949574.1 (uncharacterized protein LOC111452884 [Cucurbita moschata]) HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53 Identity = 112/135 (82.96%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Carg21028 vs. NCBI nr
Match: XP_022998560.1 (uncharacterized protein LOC111493157 [Cucurbita maxima]) HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52 Identity = 111/135 (82.22%), Postives = 119/135 (88.15%), Query Frame = 0
BLAST of Carg21028 vs. TAIR10
Match: AT2G28410.1 (unknown protein) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 0
BLAST of Carg21028 vs. TAIR10
Match: AT5G60650.1 (unknown protein) HSP 1 Score: 74.7 bits (182), Expect = 4.9e-14 Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0
BLAST of Carg21028 vs. TrEMBL
Match: tr|A0A1S3C6E2|A0A1S3C6E2_CUCME (uncharacterized protein LOC103497198 OS=Cucumis melo OX=3656 GN=LOC103497198 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 5.9e-62 Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of Carg21028 vs. TrEMBL
Match: tr|A0A0A0LV85|A0A0A0LV85_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G495260 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 6.1e-43 Identity = 102/137 (74.45%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of Carg21028 vs. TrEMBL
Match: tr|A0A1R3HAW4|A0A1R3HAW4_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20504 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 7.7e-38 Identity = 85/135 (62.96%), Postives = 100/135 (74.07%), Query Frame = 0
BLAST of Carg21028 vs. TrEMBL
Match: tr|A0A1U8JED3|A0A1U8JED3_GOSHI (uncharacterized protein LOC107906223 OS=Gossypium hirsutum OX=3635 GN=LOC107906223 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 7.2e-36 Identity = 81/137 (59.12%), Postives = 102/137 (74.45%), Query Frame = 0
BLAST of Carg21028 vs. TrEMBL
Match: tr|A0A061GY53|A0A061GY53_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_042052 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-35 Identity = 77/128 (60.16%), Postives = 96/128 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|