Cp4.1LG02g11770 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g11770
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING finger protein
LocationCp4.1LG02 : 10696056 .. 10698444 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAAGCTGAGAAAAACCGGCGTTTGCTTGTGCTTTTGCTTGATCAGTTCGAAAGAATTTCGGATTATTGATTACGAGATTTTGTTTTTTGGTTGATTTTTTTTATGTTAGATTATGAGGATAATCTGTAGGGTTTCGGTTCGAGATTTTGATTCTACTTGATCGATCATTCGTTTTCGTTGGATTGGATTTTTCTTTCCCGGGAAATTTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTGTAACTTTCTTCCTCATTCTCTTTGAGAAACGAAATTTTCGATTTGTATGGAGAATCTTTGTTTCTGCAACTTTTGGCCATAAATTCCACTCTGAAAACGCCGACGAGTTAATAAACTGATTCTGGCATGTTTACTGCTTGATTTTTCTTGTTAATTGTTTCTTTCTCTGGTTTTGTCTAGAAGGTACATATTCTACTGGCGACAGTACAAGGGACTGTTTACTTTTTGAAACTATCTACATTGTTGAGTGTTGGATGAGCAATATAAATATCTTTCAGTGAATTGTCCAGTCAAATTAAGAATGATTTAGCTTCTGTACTGCTATTGAATTTCATTACTGTTTTGTGTTTTTTTGTTTTTCAATTGTTTTTTTGTATCAGTGAATAGGGAAGAAATTGCATCGTTGATTGATCTTTCTGTCTCTGTGTAAAAGTTGAGCAGTACGGGACTGAAGAAATATCTGAGATGAGAAAGAGGGGGGATATCAGATTGATAGCAAATTCATATGAATTAGCATTAACAAATTGTTGTGGTCAAATTTTCTCTGAGCCCTGTTTTTCTTGTTTAACCATTCCTCTTTTGTTTGCAGCGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATATCTTTGTGGTATGCCTTTTACATTTTGGTACTATTTGGCAATAGTTACCAGTTAGCAGCTTTTTTTGTTTGTTTATCTGCTTGATATTTTCTCCATGGAAGGCATTATCTGTTCTAACTTTATAAGAGGTCTGATGTTCTATTACTTGACAATGAAGGTCAATATAGTTTAATTACTTCTTGTCGTGTAATGTTATGATGCAGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGGTGAGTGAGATTCTCAGATTGCATCTTAAGTATTGGAACTTCGCTTTCTGGTCTTGTTCTTGTTCTTTTCTGGTAAGGGTGTTAATGGGGGTGTTAATGGATTGTTCTTCTCATCAACAGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAAAAAGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGTAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCAACCATTCTTTATGCTTGAAATGTTATCGAGATTGGTAAGTTTTAGACTATGATTTTACTTTTCAATTGATCATAATCTATCCCCAGACCCCTTATTCTGAAAATAAGATAGAATCAGAAGTGATTTCAAGAAAGTATACTAAGTTTGAAATCAAATTATCCGTTGGATCTAAAAATCTTCATAACTATCCTGATATGTTTAGTTTGCATTCACTGCTAGCACTATTCTTAGACTCATATTCAACCTTATCTTGTCTGTCTGTTTCATCGTCCAGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCCGGCGACCTATGGATCTACACAGACAGGAATGAAACAATTGATCTTACTTCAATTTTGCAGGAGAACCGGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGAAGAATGGGGGACGCACCTCTTCAATCTGTGAGTAGTATTTTCAACTTTCTGTGTAGATAATCGATTGTAGGTTGATATGATAGGGATTGTAGAAGGGATGTTTGCCAAATTTCATTTTCTTAGTTTATCAAAGTAAATGCTTTTGGTTCACCCAATGCATAAGTTTGTTGAAATATCAGCAAATGAAATTAGTGATAGGGACAGAGATGGGCTTTGAAATCTTATGTGGGTGCTGCTTGCTAGGATATTTTAGGGTTGATGTAACGACTCAGATTGACCGCGAGCAGATATTGTC

mRNA sequence

CGAAGCTGAGAAAAACCGGCGTTTGCTTGTGCTTTTGCTTGATCAGTTCGAAAGAATTTCGGATTATTGATTACGAGATTTTGTTTTTTGGTTGATTTTTTTTATGTTAGATTATGAGGATAATCTGTAGGGTTTCGGTTCGAGATTTTGATTCTACTTGATCGATCATTCGTTTTCGTTGGATTGGATTTTTCTTTCCCGGGAAATTTCGACCGCCATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTCGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATATCTTTGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAAAAAGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGTAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCAACCATTCTTTATGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCCGGCGACCTATGGATCTACACAGACAGGAATGAAACAATTGATCTTACTTCAATTTTGCAGGAGAACCGGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGAAGAATGGGGGACGCACCTCTTCAATCTGATATTTTAGGGTTGATGTAACGACTCAGATTGACCGCGAGCAGATATTGTC

Coding sequence (CDS)

ATGGGAAAGCTTTCGTTCAAGGATTCGCTCAAAGCGCTTGAAGCCGATGTACAGCATGCCAATACTCTCGCTTTAGACTGTCCAAGAGAGAGTGATGGAGCTTGTGTTCAAATGAGAATATCTTACAGTCCTGCCGCTCCCTTTTTCCTTTTTCTTGTTCAATGGACTGACTGCCGCCTTGCTGGTGCCTTGGGGCTGCTAAGAATCCATATCTTTGTGACTTATCCAGATGGAAAGACCACCATGTCCATTTATGAGCGAAAATCTAGCATTAGAGAATTTTATGTGGTAATCTTCCCTTCTCTTCTGCAACTTCAAAAGGGCATCACAGAATTGGAAGATAGGAAACAAAAAGAGGTTTGCAATGCCAGATACAAAAGAAGGGATGAATTTGTAAGGGGAAAACTGTCAGAAATCGACAAAGAAAGAGAAAAGGAGTGTGGAATTTGCATGGAGGTTAACAGCATTGTTGTTTTGCCTCATTGCAACCATTCTTTATGCTTGAAATGTTATCGAGATTGGCGCAGTCGTTCTCAGTCGTGTCCCTTCTGTCGGGATAGCCTCAAGCGAGTGAACTCCGGCGACCTATGGATCTACACAGACAGGAATGAAACAATTGATCTTACTTCAATTTTGCAGGAGAACCGGAAGAGACTATTTATGTACATTAATAAGTTGCCATTGGTTGTTCCAGATCCAGTGTTTCTTCCTCTTGATTCTCATATTAGATGA

Protein sequence

MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDSHIR
Homology
[Close]
BLAST of Cp4.1LG02g11770 vs. Swiss-Prot
Match: MKRN4_HUMAN (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens GN=MKRN4P PE=5 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.7e-07
Identity = 27/76 (35.53%), Postives = 39/76 (51.32%), Query Frame = 1 

Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + + ++K CGICMEV         +   +L +CNH+ CLKC R WRS  +       SCP
Sbjct: 308 VQRSKDKVCGICMEVVYEKANPNEHRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCP 367

[Close]
BLAST of Cp4.1LG02g11770 vs. Swiss-Prot
Match: MKRN3_HUMAN (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens GN=MKRN3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06
Identity = 32/98 (32.65%), Postives = 46/98 (46.94%), Query Frame = 1 

Query: 127 RRDEFVRGKLSEIDKERE----------KECGICMEV---------NSIVVLPHCNHSLC 186
           +R+E +R  +   +K+ E          K CGICMEV             +L +CNHS C
Sbjct: 281 QREEHMRACIEAHEKDMELSFAVQRGMDKVCGICMEVVYEKANPNDRRFGILSNCNHSFC 340

Query: 187 LKCYRDWRSRSQ-------SCPFCRDSLKRVNSGDLWI 199
           ++C R WRS  Q       SCP CR + + V   + W+
Sbjct: 341 IRCIRRWRSARQFENRIVKSCPQCRVTSELVIPSEFWV 378

[Close]
BLAST of Cp4.1LG02g11770 vs. Swiss-Prot
Match: MKRN1_MACEU (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-06
Identity = 27/76 (35.53%), Postives = 37/76 (48.68%), Query Frame = 1 

Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + + ++  CGICMEV             +L +CNH+ CLKC R WRS  Q       SCP
Sbjct: 269 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 328

[Close]
BLAST of Cp4.1LG02g11770 vs. Swiss-Prot
Match: MKRN1_HUMAN (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1 SV=3)

HSP 1 Score: 54.3 bits (129), Expect = 2.2e-06
Identity = 27/76 (35.53%), Postives = 37/76 (48.68%), Query Frame = 1 

Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + + ++  CGICMEV             +L +CNH+ CLKC R WRS  Q       SCP
Sbjct: 273 VQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332

[Close]
BLAST of Cp4.1LG02g11770 vs. Swiss-Prot
Match: MKRN1_MOUSE (E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 27/76 (35.53%), Postives = 37/76 (48.68%), Query Frame = 1 

Query: 139 IDKEREKECGICMEV---------NSIVVLPHCNHSLCLKCYRDWRSRSQ-------SCP 198
           + + ++  CGICMEV             +L +CNH+ CLKC R WRS  Q       SCP
Sbjct: 273 VQRTKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCP 332

[Close]
BLAST of Cp4.1LG02g11770 vs. TrEMBL
Match: A0A0A0LY84_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G530140 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 9.4e-126
Identity = 220/243 (90.53%), Postives = 231/243 (95.06%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI I+VTYPDGKTTMSIYERK+SIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CNARY RRDEF RGKLSEID EREKECGICME N +VVLP+CNHSLCLKCYRDWR RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDL SIL +NRKRLF YI+KLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]
BLAST of Cp4.1LG02g11770 vs. TrEMBL
Match: A0A061GW91_THECC (RING/U-box superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_041631 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.6e-115
Identity = 200/243 (82.30%), Postives = 225/243 (92.59%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGK SFKDSLKALEAD+QHANTLALD PRE DGA +QMR+SYSPAA FFLFLVQWTDC+L
Sbjct: 1   MGKSSFKDSLKALEADIQHANTLALDHPREKDGARLQMRLSYSPAAQFFLFLVQWTDCQL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI I++TY DGKTTMS+YERK+SIREFY VIFPSLLQLQ+GIT+LEDRKQKEV
Sbjct: 61  AGALGLLRILIYMTYADGKTTMSVYERKASIREFYAVIFPSLLQLQRGITDLEDRKQKEV 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           C  RY+R+DEF RGKLSEID ERE+ECGICME+NS+VVLP+C+HSLCLKCYRDWR RSQS
Sbjct: 121 CTMRYRRKDEFERGKLSEIDIEREEECGICMEMNSMVVLPNCSHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTD+++ +DL+SIL+EN KRLFMYI KLPLVVPDPVF+P D 
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDKSDLVDLSSILRENCKRLFMYIEKLPLVVPDPVFVPYDV 240

Query: 241 HIR 244
           H+R
Sbjct: 241 HVR 243

[Close]
BLAST of Cp4.1LG02g11770 vs. TrEMBL
Match: A0A061GV85_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_041631 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.0e-112
Identity = 200/257 (77.82%), Postives = 225/257 (87.55%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGK SFKDSLKALEAD+QHANTLALD PRE DGA +QMR+SYSPAA FFLFLVQWTDC+L
Sbjct: 1   MGKSSFKDSLKALEADIQHANTLALDHPREKDGARLQMRLSYSPAAQFFLFLVQWTDCQL 60

Query: 61  AGALGLLRIHIFV--------------TYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQ 120
           AGALGLLRI I++              TY DGKTTMS+YERK+SIREFY VIFPSLLQLQ
Sbjct: 61  AGALGLLRILIYMLLTIGLWQSGELMQTYADGKTTMSVYERKASIREFYAVIFPSLLQLQ 120

Query: 121 KGITELEDRKQKEVCNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSL 180
           +GIT+LEDRKQKEVC  RY+R+DEF RGKLSEID ERE+ECGICME+NS+VVLP+C+HSL
Sbjct: 121 RGITDLEDRKQKEVCTMRYRRKDEFERGKLSEIDIEREEECGICMEMNSMVVLPNCSHSL 180

Query: 181 CLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKL 240
           CLKCYRDWR RSQSCPFCRDSLKRVNSGDLWIYTD+++ +DL+SIL+EN KRLFMYI KL
Sbjct: 181 CLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIYTDKSDLVDLSSILRENCKRLFMYIEKL 240

Query: 241 PLVVPDPVFLPLDSHIR 244
           PLVVPDPVF+P D H+R
Sbjct: 241 PLVVPDPVFVPYDVHVR 257

[Close]
BLAST of Cp4.1LG02g11770 vs. TrEMBL
Match: A0A067LPP1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08476 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.7e-112
Identity = 192/243 (79.01%), Postives = 221/243 (90.95%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSF+DSLKALEAD+QHANTLALD PRE+DGA +QMR+SYSPAA FFLFLVQWTDC L
Sbjct: 1   MGKLSFRDSLKALEADIQHANTLALDYPRENDGARLQMRLSYSPAAQFFLFLVQWTDCHL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI I++TY DGKTTMS+YERK+S+REFY VIFPS++QLQKGIT+LED+KQ E+
Sbjct: 61  AGALGLLRILIYLTYADGKTTMSVYERKASLREFYAVIFPSIMQLQKGITDLEDKKQNEI 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN RYKR+DE  RGKLSEID ERE+ECGICME+ S  VLP+CNHSLCLKC+RDWR RSQS
Sbjct: 121 CNIRYKRKDELERGKLSEIDIEREEECGICMEIGSKAVLPNCNHSLCLKCFRDWRERSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTD+ +T+DL+ IL+EN KRLFMYI+KLPL+VPD V +P DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDKCDTVDLSLILRENSKRLFMYIDKLPLIVPDSVIVPYDS 240

Query: 241 HIR 244
           H+R
Sbjct: 241 HVR 243

[Close]
BLAST of Cp4.1LG02g11770 vs. TrEMBL
Match: A0A0B0P6K7_GOSAR (RING finger protein OS=Gossypium arboreum GN=F383_07518 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.3e-111
Identity = 193/243 (79.42%), Postives = 221/243 (90.95%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEAD+QHANTLALD PRE DGA +QMR+SYSPAA FFLFLVQWTDC+L
Sbjct: 1   MGKLSFKDSLKALEADIQHANTLALDYPREKDGARLQMRLSYSPAAQFFLFLVQWTDCQL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI I++TY DGKTTMS+YERK+SIREFY VIFPSLLQLQKGIT LEDRKQKEV
Sbjct: 61  AGALGLLRILIYMTYADGKTTMSVYERKASIREFYAVIFPSLLQLQKGITSLEDRKQKEV 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           C  RY+++DE  RGKLSEID ERE+ECGIC+E++S+VVLP+C+HSLCLKCYRDW  RSQS
Sbjct: 121 CTMRYRKKDESERGKLSEIDLEREEECGICLEMSSMVVLPNCSHSLCLKCYRDWHGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNS DLWIYT+++E +DL+ IL+EN  RLFMYI+KLPL+VPDPVF+P D 
Sbjct: 181 CPFCRDSLKRVNSCDLWIYTEKSEIVDLSLILRENSNRLFMYIDKLPLIVPDPVFVPYDV 240

Query: 241 HIR 244
           H+R
Sbjct: 241 HVR 243

[Close]
BLAST of Cp4.1LG02g11770 vs. TAIR10
Match: AT5G58787.1 (AT5G58787.1 RING/U-box superfamily protein)

HSP 1 Score: 374.4 bits (960), Expect = 5.3e-104
Identity = 177/245 (72.24%), Postives = 212/245 (86.53%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           M KLSFKDSLKALEAD+QHANTLALD PRE DGA VQMR+SYSP A FFLFLVQWTDC+L
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AG LGLLR+ I++TY DGKTTMS+YERK+SIREF  VI PSL QLQ+G+T+++D KQKEV
Sbjct: 61  AGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEV 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           C  RY+++DE    ++SEI+ ERE+ECGICME+NS VVLP+C HSLC+KCYRDWR RSQS
Sbjct: 121 CKMRYRKKDE---SEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFL--PL 240
           CPFCRDSLKRV+SGDLW++ D+N+T++LT+I +EN+KRLFMYI KLPLVVPD V+   P 
Sbjct: 181 CPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPY 240

Query: 241 DSHIR 244
           D H+R
Sbjct: 241 DFHVR 242

[Close]
BLAST of Cp4.1LG02g11770 vs. TAIR10
Match: AT3G47160.2 (AT3G47160.2 RING/U-box superfamily protein)

HSP 1 Score: 365.2 bits (936), Expect = 3.2e-101
Identity = 173/257 (67.32%), Postives = 213/257 (82.88%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTL------------ALDCPRESDGACVQMRISYSPAAPF 60
           M K+SFKDSLKALEAD+QHANT+            ALD PRE DGA VQMR+SY+PAA F
Sbjct: 1   MAKVSFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQF 60

Query: 61  FLFLVQWTDCRLAGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKG 120
            LFLVQWTDC LAG LGLLR+ I++TY DGKTTMS+YERK+SI++FY VIFPSLLQL++G
Sbjct: 61  LLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERG 120

Query: 121 ITELEDRKQKEVCNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCL 180
           IT+L+DRKQKEVC  RY+ +DE  + KLSEID ERE+ECGICME+N++VVLP+C HSLC+
Sbjct: 121 ITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCI 180

Query: 181 KCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPL 240
           KCYRDW  RS+SCPFCRDSLKRVNSGDLW+  ++++T+++ +I +EN+KRLF+YI KLPL
Sbjct: 181 KCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPL 240

Query: 241 VVPDPVFL--PLDSHIR 244
           VVPD VF   P D H++
Sbjct: 241 VVPDQVFASSPYDCHVK 257

[Close]
BLAST of Cp4.1LG02g11770 vs. TAIR10
Match: AT5G01520.1 (AT5G01520.1 RING/U-box superfamily protein)

HSP 1 Score: 337.0 bits (863), Expect = 9.4e-93
Identity = 160/233 (68.67%), Postives = 192/233 (82.40%), Query Frame = 1 

Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRLAGAL 64
           SFKDSLKALEAD+Q ANTLA + P E DG  VQMR+SYSPAA  FLFL+QWTDC  AGAL
Sbjct: 4   SFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL 63

Query: 65  GLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEVCNAR 124
           GLLRI I+  Y DGKTTMS++ERK+SIREFY V+FPSLLQL  GIT++E+RKQKE+C+ R
Sbjct: 64  GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEICDKR 123

Query: 125 YKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQSCPFC 184
           Y+++D   +GK+SEID ERE+ECGIC+E+ + VVLP CNHS+C+ CYR+WR+RSQSCPFC
Sbjct: 124 YRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFC 183

Query: 185 RDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLP 238
           R SLKRVNSGDLWIYT   E  DL +I +EN KRL +YI+KLPLV  DP  +P
Sbjct: 184 RGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVP 236

[Close]
BLAST of Cp4.1LG02g11770 vs. TAIR10
Match: AT1G24440.1 (AT1G24440.1 RING/U-box superfamily protein)

HSP 1 Score: 204.9 bits (520), Expect = 5.6e-53
Identity = 105/254 (41.34%), Postives = 153/254 (60.24%), Query Frame = 1 

Query: 3   KLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTD--CRL 62
           K S++DSLK LEAD++HAN LA + P    G  +QM++  S  APFF+FL+QW D  C L
Sbjct: 7   KSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWMDFSCLL 66

Query: 63  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELED------ 122
                   I I+    DG+   S Y RK++IREFY VI PSL +L     +L D      
Sbjct: 67  PRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADLPDESLWYP 126

Query: 123 ------RKQKEVCNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCL 182
                 +KQ ++  +RY          ++ ID ERE ECGIC+E  + +VLP+C H++C+
Sbjct: 127 NPKAITKKQYDIEGSRY----------MNSIDLEREDECGICLEPCTKMVLPNCCHAMCI 186

Query: 183 KCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPL 242
           KCYR+W ++S+SCPFCR S+KRVNS DLW+ T   + +D  ++ +E+  R +++IN LP 
Sbjct: 187 KCYRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPK 246

[Close]
BLAST of Cp4.1LG02g11770 vs. TAIR10
Match: AT1G13195.1 (AT1G13195.1 RING/U-box superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-47
Identity = 97/237 (40.93%), Postives = 142/237 (59.92%), Query Frame = 1 

Query: 5   SFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTD----CRL 64
           S+ +SLK LEADVQHAN+LA   P   +   +QM++ +S  A   LFL++W D    C +
Sbjct: 15  SYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLI 74

Query: 65  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQK-E 124
              L L  + ++    DG+  ++ + RK++I EFY VI PSL  L   + ELE      +
Sbjct: 75  PRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDIGFD 134

Query: 125 VCNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQ 184
           +     K   E    + S    ERE+ECGIC+E  + +VLP+C HS+C+KCYR+W  +SQ
Sbjct: 135 LKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQ 194

Query: 185 SCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFL 237
           SCPFCR S+KRVNS DLW+    N+ +D  +  +E+  R ++YIN LP   P+ +F+
Sbjct: 195 SCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFV 251

[Close]
BLAST of Cp4.1LG02g11770 vs. NCBI nr
Match: gi|778661695|ref|XP_011658560.1| (PREDICTED: uncharacterized protein LOC101203772 [Cucumis sativus])

HSP 1 Score: 457.6 bits (1176), Expect = 1.4e-125
Identity = 220/243 (90.53%), Postives = 231/243 (95.06%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAPFFLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI I+VTYPDGKTTMSIYERK+SIREFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRILIYVTYPDGKTTMSIYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CNARY RRDEF RGKLSEID EREKECGICME N +VVLP+CNHSLCLKCYRDWR RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDL SIL +NRKRLF YI+KLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]
BLAST of Cp4.1LG02g11770 vs. NCBI nr
Match: gi|659115083|ref|XP_008457378.1| (PREDICTED: uncharacterized protein LOC103497086 [Cucumis melo])

HSP 1 Score: 450.3 bits (1157), Expect = 2.2e-123
Identity = 216/243 (88.89%), Postives = 229/243 (94.24%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMR+SYSPAAP FLFLVQWTDC L
Sbjct: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRLSYSPAAPLFLFLVQWTDCYL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI ++VTYPDGKTTMSIYERK+SI+EFYVVIFPSLLQLQKGITELEDRKQKEV
Sbjct: 61  AGALGLLRILLYVTYPDGKTTMSIYERKASIKEFYVVIFPSLLQLQKGITELEDRKQKEV 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CNARY RRDEF RGKLSEID EREKECGICME N +VVLP+CNHSLCLKCYRDWR RSQS
Sbjct: 121 CNARYSRRDEFGRGKLSEIDIEREKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWI+TD++E IDL SIL +N KRLF YI+KLPLVVPDPVFLP+DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIFTDKSEMIDLNSILHDNCKRLFAYIDKLPLVVPDPVFLPIDS 240

Query: 241 HIR 244
           HIR
Sbjct: 241 HIR 243

[Close]
BLAST of Cp4.1LG02g11770 vs. NCBI nr
Match: gi|590588079|ref|XP_007016117.1| (RING/U-box superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 422.9 bits (1086), Expect = 3.7e-115
Identity = 200/243 (82.30%), Postives = 225/243 (92.59%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGK SFKDSLKALEAD+QHANTLALD PRE DGA +QMR+SYSPAA FFLFLVQWTDC+L
Sbjct: 1   MGKSSFKDSLKALEADIQHANTLALDHPREKDGARLQMRLSYSPAAQFFLFLVQWTDCQL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI I++TY DGKTTMS+YERK+SIREFY VIFPSLLQLQ+GIT+LEDRKQKEV
Sbjct: 61  AGALGLLRILIYMTYADGKTTMSVYERKASIREFYAVIFPSLLQLQRGITDLEDRKQKEV 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           C  RY+R+DEF RGKLSEID ERE+ECGICME+NS+VVLP+C+HSLCLKCYRDWR RSQS
Sbjct: 121 CTMRYRRKDEFERGKLSEIDIEREEECGICMEMNSMVVLPNCSHSLCLKCYRDWRGRSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTD+++ +DL+SIL+EN KRLFMYI KLPLVVPDPVF+P D 
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDKSDLVDLSSILRENCKRLFMYIEKLPLVVPDPVFVPYDV 240

Query: 241 HIR 244
           H+R
Sbjct: 241 HVR 243

[Close]
BLAST of Cp4.1LG02g11770 vs. NCBI nr
Match: gi|590588054|ref|XP_007016116.1| (RING/U-box superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 413.3 bits (1061), Expect = 2.9e-112
Identity = 200/257 (77.82%), Postives = 225/257 (87.55%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGK SFKDSLKALEAD+QHANTLALD PRE DGA +QMR+SYSPAA FFLFLVQWTDC+L
Sbjct: 1   MGKSSFKDSLKALEADIQHANTLALDHPREKDGARLQMRLSYSPAAQFFLFLVQWTDCQL 60

Query: 61  AGALGLLRIHIFV--------------TYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQ 120
           AGALGLLRI I++              TY DGKTTMS+YERK+SIREFY VIFPSLLQLQ
Sbjct: 61  AGALGLLRILIYMLLTIGLWQSGELMQTYADGKTTMSVYERKASIREFYAVIFPSLLQLQ 120

Query: 121 KGITELEDRKQKEVCNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSL 180
           +GIT+LEDRKQKEVC  RY+R+DEF RGKLSEID ERE+ECGICME+NS+VVLP+C+HSL
Sbjct: 121 RGITDLEDRKQKEVCTMRYRRKDEFERGKLSEIDIEREEECGICMEMNSMVVLPNCSHSL 180

Query: 181 CLKCYRDWRSRSQSCPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKL 240
           CLKCYRDWR RSQSCPFCRDSLKRVNSGDLWIYTD+++ +DL+SIL+EN KRLFMYI KL
Sbjct: 181 CLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIYTDKSDLVDLSSILRENCKRLFMYIEKL 240

Query: 241 PLVVPDPVFLPLDSHIR 244
           PLVVPDPVF+P D H+R
Sbjct: 241 PLVVPDPVFVPYDVHVR 257

[Close]
BLAST of Cp4.1LG02g11770 vs. NCBI nr
Match: gi|802538353|ref|XP_012067675.1| (PREDICTED: LON peptidase N-terminal domain and RING finger protein 1 [Jatropha curcas])

HSP 1 Score: 412.9 bits (1060), Expect = 3.8e-112
Identity = 192/243 (79.01%), Postives = 221/243 (90.95%), Query Frame = 1 

Query: 1   MGKLSFKDSLKALEADVQHANTLALDCPRESDGACVQMRISYSPAAPFFLFLVQWTDCRL 60
           MGKLSF+DSLKALEAD+QHANTLALD PRE+DGA +QMR+SYSPAA FFLFLVQWTDC L
Sbjct: 1   MGKLSFRDSLKALEADIQHANTLALDYPRENDGARLQMRLSYSPAAQFFLFLVQWTDCHL 60

Query: 61  AGALGLLRIHIFVTYPDGKTTMSIYERKSSIREFYVVIFPSLLQLQKGITELEDRKQKEV 120
           AGALGLLRI I++TY DGKTTMS+YERK+S+REFY VIFPS++QLQKGIT+LED+KQ E+
Sbjct: 61  AGALGLLRILIYLTYADGKTTMSVYERKASLREFYAVIFPSIMQLQKGITDLEDKKQNEI 120

Query: 121 CNARYKRRDEFVRGKLSEIDKEREKECGICMEVNSIVVLPHCNHSLCLKCYRDWRSRSQS 180
           CN RYKR+DE  RGKLSEID ERE+ECGICME+ S  VLP+CNHSLCLKC+RDWR RSQS
Sbjct: 121 CNIRYKRKDELERGKLSEIDIEREEECGICMEIGSKAVLPNCNHSLCLKCFRDWRERSQS 180

Query: 181 CPFCRDSLKRVNSGDLWIYTDRNETIDLTSILQENRKRLFMYINKLPLVVPDPVFLPLDS 240
           CPFCRDSLKRVNSGDLWIYTD+ +T+DL+ IL+EN KRLFMYI+KLPL+VPD V +P DS
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDKCDTVDLSLILRENSKRLFMYIDKLPLIVPDSVIVPYDS 240

Query: 241 HIR 244
           H+R
Sbjct: 241 HVR 243

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g11770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MKRN4_HUMAN5.7e-0735.53Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens GN=MKRN4P PE=5 SV... [more]
MKRN3_HUMAN1.7e-0632.65Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens GN=MKRN3 PE=1 SV=... [more]
MKRN1_MACEU2.2e-0635.53E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1 PE=2 SV=1[more]
MKRN1_HUMAN2.2e-0635.53E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1 SV=3[more]
MKRN1_MOUSE2.8e-0635.53E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=1 SV=1[more]
BLAST of Cp4.1LG02g11770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY84_CUCSA9.4e-12690.53Uncharacterized protein OS=Cucumis sativus GN=Csa_1G530140 PE=4 SV=1[more]
A0A061GW91_THECC2.6e-11582.30RING/U-box superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_041631 PE=4 S... [more]
A0A061GV85_THECC2.0e-11277.82RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_041631 PE=4 S... [more]
A0A067LPP1_JATCU2.7e-11279.01Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08476 PE=4 SV=1[more]
A0A0B0P6K7_GOSAR2.3e-11179.42RING finger protein OS=Gossypium arboreum GN=F383_07518 PE=4 SV=1[more]
BLAST of Cp4.1LG02g11770 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58787.15.3e-10472.24 RING/U-box superfamily protein[more]
AT3G47160.23.2e-10167.32 RING/U-box superfamily protein[more]
AT5G01520.19.4e-9368.67 RING/U-box superfamily protein[more]
AT1G24440.15.6e-5341.34 RING/U-box superfamily protein[more]
AT1G13195.11.2e-4740.93 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG02g11770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778661695|ref|XP_011658560.1|1.4e-12590.53PREDICTED: uncharacterized protein LOC101203772 [Cucumis sativus][more]
gi|659115083|ref|XP_008457378.1|2.2e-12388.89PREDICTED: uncharacterized protein LOC103497086 [Cucumis melo][more]
gi|590588079|ref|XP_007016117.1|3.7e-11582.30RING/U-box superfamily protein isoform 2 [Theobroma cacao][more]
gi|590588054|ref|XP_007016116.1|2.9e-11277.82RING/U-box superfamily protein isoform 1 [Theobroma cacao][more]
gi|802538353|ref|XP_012067675.1|3.8e-11279.01PREDICTED: LON peptidase N-terminal domain and RING finger protein 1 [Jatropha c... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g11770.1Cp4.1LG02g11770.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 147..184
score: 6.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 147..185
score: 11
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 137..207
score: 2.7
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 162..171
scor
NoneNo IPR availablePANTHERPTHR15315RING FINGER PROTEIN 41, 151coord: 32..243
score: 4.9E
NoneNo IPR availablePANTHERPTHR15315:SF33SUBFAMILY NOT NAMEDcoord: 32..243
score: 4.9E
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 144..190
score: 2.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 130..190
score: 1.79