Cp4.1LG02g11320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g11320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
LocationCp4.1LG02 : 10154885 .. 10155789 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTTTTTTCTCCCTTCTTCCACAGAAATCGATTGGCGAAAGGATTACAATTGACCCACAATCATTTGGGGAATCTTCAACTCGTTGCACAATATTTGACGATTCTCGGGAGCTTGGCACTTGCTCTACATGACACTGTGCAAGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAGCTCTATGACATCCCAACGCAGATCTGGGTGCTATCAGTTCTAACAAGTATGCATATCATAATTCTTCCTAGTTACTATAAACATTTTGGTAGATTTTCACAAGGCACCTAGACTGAAGAACACATGCTGCGAGCAACTGTCTCAGGACATTTTTTCTTGCATATTTGGATAAAGGTTACAAGCGTAAACGTGGGAAGAAGGGAGCGAGTGTGTGAAGGGTTATTATAGGGGTGATGTTTGTGAGAGGAGCATATCATTTTTCTGCACGAACATTCTATTACATTAGTACACATACAAATTTACCTTTTTTTCTTCATATATTTATAGCTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAACGCAGAATATCAATCTAAAAAGGCAGATGATCTGCAAAAGAGACTCGTCGATGCTCATTCATCCATTCATCACATCGATTTAGTAAGCCATTCATGTTGATCTAATCTTTCTTTCTGTTCTTTTTAAGAGAATGTTGTTCTAATCGTTTGATGAATACAGATCGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGGTCGATATGAAGCGTGCAATAGGTGGCCCGTCGCTTGGGGTTAATCTTGATATCCCAGAATCCATTGGGGTATCAGTTTCATTGCCTACTTCGTCGTTGAAGCTTATGGATATGGACACAGGGAGACGTGGGAAGAGGAAACTTTAG

mRNA sequence

ATGGTGTTTTTTTCTCCCTTCTTCCACAGAAATCGATTGGCGAAAGGATTACAATTGACCCACAATCATTTGGGGAATCTTCAACTCGTTGCACAATATTTGACGATTCTCGGGAGCTTGGCACTTGCTCTACATGACACTGTGCAAGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAGCTCTATGACATCCCAACGCAGATCTGGGTGCTATCAGTTCTAACAACTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAACGCAGAATATCAATCTAAAAAGGCAGATGATCTGCAAAAGAGACTCGTCGATGCTCATTCATCCATTCATCACATCGATTTAATCGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGGTCGATATGAAGCGTGCAATAGGTGGCCCGTCGCTTGGGGTTAATCTTGATATCCCAGAATCCATTGGGGTATCAGTTTCATTGCCTACTTCGTCGTTGAAGCTTATGGATATGGACACAGGGAGACGTGGGAAGAGGAAACTTTAG

Coding sequence (CDS)

ATGGTGTTTTTTTCTCCCTTCTTCCACAGAAATCGATTGGCGAAAGGATTACAATTGACCCACAATCATTTGGGGAATCTTCAACTCGTTGCACAATATTTGACGATTCTCGGGAGCTTGGCACTTGCTCTACATGACACTGTGCAAGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAGCTCTATGACATCCCAACGCAGATCTGGGTGCTATCAGTTCTAACAACTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAACGCAGAATATCAATCTAAAAAGGCAGATGATCTGCAAAAGAGACTCGTCGATGCTCATTCATCCATTCATCACATCGATTTAATCGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGGTCGATATGAAGCGTGCAATAGGTGGCCCGTCGCTTGGGGTTAATCTTGATATCCCAGAATCCATTGGGGTATCAGTTTCATTGCCTACTTCGTCGTTGAAGCTTATGGATATGGACACAGGGAGACGTGGGAAGAGGAAACTTTAG

Protein sequence

MVFFSPFFHRNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL
Homology
[Close]
BLAST of Cp4.1LG02g11320 vs. TrEMBL
Match: A0A0A0L1H4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G000020 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.0e-73
Identity = 154/171 (90.06%), Postives = 162/171 (94.74%), Query Frame = 1 

Query: 11  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 70
           NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ
Sbjct: 14  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 73

Query: 71  IWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQQ 130
           IWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+LI+KVR EIQQ
Sbjct: 74  IWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIELIDKVRLEIQQ 133

Query: 131 LKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL 182
           LK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRRGKRK+
Sbjct: 134 LKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRRGKRKI 181

[Close]
BLAST of Cp4.1LG02g11320 vs. TrEMBL
Match: A0A059AEJ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01848 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.5e-69
Identity = 139/172 (80.81%), Postives = 156/172 (90.70%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLA+GLQLTH+HLGNLQLVAQYLTILGSLALALHDT QAREILRSSLTLAKKL DIPT
Sbjct: 552 RNRLARGLQLTHSHLGNLQLVAQYLTILGSLALALHDTAQAREILRSSLTLAKKLTDIPT 611

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLT LYQELGE+GNEMENAEYQ KK +DLQKRL DAHSSIHHI+LI+K + E+Q
Sbjct: 612 QIWVLSVLTALYQELGERGNEMENAEYQRKKVEDLQKRLADAHSSIHHIELIDKAKLELQ 671

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL 182
              E+D+KRA+G  S+GVNLDIPES+G+S  LPTSS +L+D+DTGRRGKRKL
Sbjct: 672 NYHELDVKRALGS-SMGVNLDIPESVGLSTPLPTSSSRLVDLDTGRRGKRKL 722

[Close]
BLAST of Cp4.1LG02g11320 vs. TrEMBL
Match: W9QXY9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022693 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.1e-68
Identity = 135/172 (78.49%), Postives = 152/172 (88.37%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLA+GLQLTHNHLGNLQLV+QYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 551 RNRLARGLQLTHNHLGNLQLVSQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 610

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVL+TLY ELGEKGNEMEN EYQ KK +DLQKRL DAHSSIHH++LI+KV+ E  
Sbjct: 611 QIWVLSVLSTLYHELGEKGNEMENTEYQRKKMEDLQKRLADAHSSIHHLELIDKVKFEFH 670

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL 182
           Q  ++D+KRA+G PS  V+LDIPESIG S  LP    +L+D+DTGRRG+RKL
Sbjct: 671 QFHDLDIKRAVGDPSTRVDLDIPESIGFSTPLPNFQSRLVDLDTGRRGRRKL 722

[Close]
BLAST of Cp4.1LG02g11320 vs. TrEMBL
Match: D7SJG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g08370 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.2e-66
Identity = 136/173 (78.61%), Postives = 155/173 (89.60%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           R RLA GLQ+THNHLGNLQLV+QYLTILGSLALALHDT QAREILRSSLTLAKKL DIPT
Sbjct: 550 RIRLATGLQITHNHLGNLQLVSQYLTILGSLALALHDTGQAREILRSSLTLAKKLCDIPT 609

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLT LYQELGE+GNEMEN+EYQ +KADDLQKRLVDAHSSIHHI+LIEKVR E++
Sbjct: 610 QIWVLSVLTALYQELGERGNEMENSEYQRRKADDLQKRLVDAHSSIHHIELIEKVRLEVR 669

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPT-SSLKLMDMDTGRRGKRKL 182
           QL E+D+KRA+ G S+ V+LDIPES+G+    P  SS +L+D+DTGRRGKRK+
Sbjct: 670 QLHELDIKRAVAGSSMRVSLDIPESVGLLTPSPAPSSSRLVDLDTGRRGKRKI 722

[Close]
BLAST of Cp4.1LG02g11320 vs. TrEMBL
Match: A5AMD4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031635 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.2e-66
Identity = 136/173 (78.61%), Postives = 155/173 (89.60%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           R RLA GLQ+THNHLGNLQLV+QYLTILGSLALALHDT QAREILRSSLTLAKKL DIPT
Sbjct: 207 RIRLATGLQITHNHLGNLQLVSQYLTILGSLALALHDTGQAREILRSSLTLAKKLCDIPT 266

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLT LYQELGE+GNEMEN+EYQ +KADDLQKRLVDAHSSIHHI+LIEKVR E++
Sbjct: 267 QIWVLSVLTALYQELGERGNEMENSEYQRRKADDLQKRLVDAHSSIHHIELIEKVRLEVR 326

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPT-SSLKLMDMDTGRRGKRKL 182
           QL E+D+KRA+ G S+ V+LDIPES+G+    P  SS +L+D+DTGRRGKRK+
Sbjct: 327 QLHELDIKRAVAGSSMRVSLDIPESVGLLTPSPAPSSSRLVDLDTGRRGKRKI 379

[Close]
BLAST of Cp4.1LG02g11320 vs. TAIR10
Match: AT5G51340.1 (AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-55
Identity = 112/176 (63.64%), Postives = 141/176 (80.11%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQ+ HNH+GNLQLVAQYLT+LG+LAL+LHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 551 RNRLAKGLQIAHNHMGNLQLVAQYLTLLGNLALSLHDTVQAREILRSSLTLAKKLYDIPT 610

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           Q+WVLS+ T LYQ+LGEKGNEMEN E++ KK D+LQ RL +A  SIHHI+L+ K R E+ 
Sbjct: 611 QLWVLSIFTALYQQLGEKGNEMENEEFRKKKWDELQSRLAEARGSIHHIELVAKARIELY 670

Query: 130 QLKEVDMKRAI--GGPSLGVNLDIPESIGVSVSLPT-SSLKLMDMDTGRR-GKRKL 182
           Q+     ++++     S+  NLDIPES+G+    P  SS +L+ +DTG+R GKR++
Sbjct: 671 QIDNNPQEQSLVASAQSMQGNLDIPESVGIEGPSPAPSSSRLVGLDTGKRWGKRRM 726

[Close]
BLAST of Cp4.1LG02g11320 vs. NCBI nr
Match: gi|449456905|ref|XP_004146189.1| (PREDICTED: MAU2 chromatid cohesion factor homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 155/172 (90.12%), Postives = 163/172 (94.77%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 550 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 609

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+LI+KVR EIQ
Sbjct: 610 QIWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIELIDKVRLEIQ 669

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL 182
           QLK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRRGKRK+
Sbjct: 670 QLKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRRGKRKI 718

[Close]
BLAST of Cp4.1LG02g11320 vs. NCBI nr
Match: gi|778674503|ref|XP_011650234.1| (PREDICTED: MAU2 chromatid cohesion factor homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 155/172 (90.12%), Postives = 163/172 (94.77%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 537 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 596

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+LI+KVR EIQ
Sbjct: 597 QIWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIELIDKVRLEIQ 656

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL 182
           QLK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRRGKRK+
Sbjct: 657 QLKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRRGKRKI 705

[Close]
BLAST of Cp4.1LG02g11320 vs. NCBI nr
Match: gi|659095143|ref|XP_008448423.1| (PREDICTED: LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 4.4e-73
Identity = 154/172 (89.53%), Postives = 162/172 (94.19%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 550 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 609

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+LI+KVR EIQ
Sbjct: 610 QIWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIELIDKVRLEIQ 669

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL 182
           QLK VD+KRA G  SLGV+LDIP SIG SVS  TSSLKLMD+D+GRRGKRK+
Sbjct: 670 QLKGVDIKRA-GSISLGVDLDIPGSIGASVS--TSSLKLMDIDSGRRGKRKI 718

[Close]
BLAST of Cp4.1LG02g11320 vs. NCBI nr
Match: gi|700200445|gb|KGN55578.1| (hypothetical protein Csa_3G000020 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 5.8e-73
Identity = 154/171 (90.06%), Postives = 162/171 (94.74%), Query Frame = 1 

Query: 11  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 70
           NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ
Sbjct: 14  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 73

Query: 71  IWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQQ 130
           IWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+LI+KVR EIQQ
Sbjct: 74  IWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIELIDKVRLEIQQ 133

Query: 131 LKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL 182
           LK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRRGKRK+
Sbjct: 134 LKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRRGKRKI 181

[Close]
BLAST of Cp4.1LG02g11320 vs. NCBI nr
Match: gi|1009180235|ref|XP_015871514.1| (PREDICTED: uncharacterized protein LOC107408622, partial [Ziziphus jujuba])

HSP 1 Score: 270.0 bits (689), Expect = 3.0e-69
Identity = 140/173 (80.92%), Postives = 156/173 (90.17%), Query Frame = 1 

Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYD+PT
Sbjct: 125 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDVPT 184

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGE+GNEMEN +YQ KK DDLQKRL DA SSIHHI+LI+KV+ ++Q
Sbjct: 185 QIWVLSVLTTLYQELGERGNEMENIDYQRKKMDDLQKRLADALSSIHHIELIDKVKLQVQ 244

Query: 130 QLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSL-KLMDMDTGRRGKRKL 182
           Q  EVD+KRAI GPS+ +NLDIPESIG+S  LP SS  +L+D+D GR GKRK+
Sbjct: 245 QFHEVDIKRAIAGPSMSINLDIPESIGLSAPLPGSSTSRLVDLDIGRLGKRKI 297

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g11320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG02g11320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1H4_CUCSA4.0e-7390.06Uncharacterized protein OS=Cucumis sativus GN=Csa_3G000020 PE=4 SV=1[more]
A0A059AEJ6_EUCGR3.5e-6980.81Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01848 PE=4 SV=1[more]
W9QXY9_9ROSA5.1e-6878.49Uncharacterized protein OS=Morus notabilis GN=L484_022693 PE=4 SV=1[more]
D7SJG2_VITVI2.2e-6678.61Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g08370 PE=4 SV=... [more]
A5AMD4_VITVI2.2e-6678.61Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031635 PE=4 SV=1[more]
BLAST of Cp4.1LG02g11320 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51340.11.2e-5563.64 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cp4.1LG02g11320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456905|ref|XP_004146189.1|1.5e-7390.12PREDICTED: MAU2 chromatid cohesion factor homolog isoform X1 [Cucumis sativus][more]
gi|778674503|ref|XP_011650234.1|1.5e-7390.12PREDICTED: MAU2 chromatid cohesion factor homolog isoform X2 [Cucumis sativus][more]
gi|659095143|ref|XP_008448423.1|4.4e-7389.53PREDICTED: LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog [Cucumis ... [more]
gi|700200445|gb|KGN55578.1|5.8e-7390.06hypothetical protein Csa_3G000020 [Cucumis sativus][more]
gi|1009180235|ref|XP_015871514.1|3.0e-6980.92PREDICTED: uncharacterized protein LOC107408622, partial [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007064mitotic sister chromatid cohesion
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR019440MAU2
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007064 mitotic sister chromatid cohesion
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0006487 protein N-linked glycosylation
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0044238 primary metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g11320.1Cp4.1LG02g11320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 13..87
score: 2.
IPR019440Chromatid cohesion factor MAU2PANTHERPTHR21394UNCHARACTERIZEDcoord: 10..152
score: 7.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g11320Cp4.1LG00g04650Cucurbita pepo (Zucchini)cpecpeB009
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g11320Cucurbita pepo (Zucchini)cpecpeB010
Cp4.1LG02g11320Cucumber (Gy14) v1cgycpeB0261
Cp4.1LG02g11320Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g11320Cucurbita moschata (Rifu)cmocpeB448
Cp4.1LG02g11320Wild cucumber (PI 183967)cpecpiB535
Cp4.1LG02g11320Cucumber (Chinese Long) v2cpecuB533
Cp4.1LG02g11320Cucumber (Gy14) v2cgybcpeB098
Cp4.1LG02g11320Silver-seed gourdcarcpeB0738
Cp4.1LG02g11320Cucumber (Chinese Long) v3cpecucB0665