Cp4.1LG00g04650 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g04650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Cp4.1LG00 : 17672464 .. 17673552 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTTTTTTCTCCCTTCTTCCACAGAAATCGATTGGCGAAAGGATTACAATTGACCCACAATCATTTGGGGAATCTTCAACTCGTTGCACAATATTTGACGATTCTCGGGAGCTTGGCACTTGCTCTACATGACACTGTGCAAGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAGCTCTATGACATCCCAACGCAGATCTGGGTGCTATCAGTTCTAACAAGTATGCATATCATAATTCTTCCTAGTTACTATAAACATTTTGGTAGATTTTCACAAGGCACCTAGACTGAAGAACACATGCTGCGAGCAACTGTCTCAGGACATTTTTTCTTGCATATTTGGATAAAGGTTATGAGCGTAAACGTGGGAATAAGGGAGCGAGTGTGTGAAGGGTTATTATAGGGGTGATGTTTGTGAGAGGAGCATATCATTTTTCTGCACGAACATTCTATTACATTAGTACACATACAAATTTACCTTTTTTTCTTCATATATTTATAGCTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAACGCAGAATATCAATCTAAAAAGGCAGATGATCTGCAAAAGAGACTCGTCGATGCTCATTCATCCATTCATCACATCGATTTAGTAAGCCATTCATGTTGATCTAATCTTTCTTTCTGTTCTTTTTAAGAGAATGTTGTTCTAATCGTTTGATGAATACAGATCGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGGTCGATATGAAGCGTGCAATAGGTGGCCNTCGTCGATGCTCATTCATCCATTCATCACATCGATTTAGTAGGCCATTCATGTTGCTCTAATCTTTCTTTCTGTTCTTTTTTAGAGAATGTTGTTCTAATCGTTTGATGAATACAGATTGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGGTCGATATGAAGCGTGCAATAGGTGGCCCGTCGCTTGGGGTTAATCTTGATATCCCAGAATCCATTGGGGTATCAGTTTCATTGCCTACTTCGTCGTTGAAGCTTATGGATATGGACACAGGGAGACGTGGGAAGAGGAAACTTTAG

mRNA sequence

ATGGTGTTTTTTTCTCCCTTCTTCCACAGAAATCGATTGGCGAAAGGATTACAATTGACCCACAATCATTTGGGGAATCTTCAACTCGTTGCACAATATTTGACGATTCTCGGGAGCTTGGCACTTGCTCTACATGACACTGTGCAAGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAGCTCTATGACATCCCAACGCAGATCTGGGTGCTATCAGTTCTAACAACTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAACGCAGAATATCAATCTAAAAAGGCAGATGATCTGCAAAAGAGACTCGTCGATGCTCATTCATCCATTCATCACATCGATTTAATCGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGATTGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGGTCGATATGAAGCGTGCAATAGGTGGCCCGTCGCTTGGGGTTAATCTTGATATCCCAGAATCCATTGGGGTATCAGTTTCATTGCCTACTTCGTCGTTGAAGCTTATGGATATGGACACAGGGAGACGTGGGAAGAGGAAACTTTAG

Coding sequence (CDS)

ATGGTGTTTTTTTCTCCCTTCTTCCACAGAAATCGATTGGCGAAAGGATTACAATTGACCCACAATCATTTGGGGAATCTTCAACTCGTTGCACAATATTTGACGATTCTCGGGAGCTTGGCACTTGCTCTACATGACACTGTGCAAGCCAGAGAGATATTGAGATCATCTTTAACATTGGCAAAGAAGCTCTATGACATCCCAACGCAGATCTGGGTGCTATCAGTTCTAACAACTTTATACCAAGAATTGGGTGAAAAGGGAAATGAGATGGAGAACGCAGAATATCAATCTAAAAAGGCAGATGATCTGCAAAAGAGACTCGTCGATGCTCATTCATCCATTCATCACATCGATTTAATCGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGATTGAAAAAGTACGGCGTGAAATTCAGCAACTTAAGGAGGTCGATATGAAGCGTGCAATAGGTGGCCCGTCGCTTGGGGTTAATCTTGATATCCCAGAATCCATTGGGGTATCAGTTTCATTGCCTACTTCGTCGTTGAAGCTTATGGATATGGACACAGGGAGACGTGGGAAGAGGAAACTTTAG

Protein sequence

MVFFSPFFHRNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQQLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRGKRKL

Homology

[Close]

BLAST of Cp4.1LG00g04650 vs. TrEMBL
Match: A0A0A0L1H4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G000020 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.7e-70
Identity = 154/184 (83.70%), Postives = 162/184 (88.04%), Query Frame = 1


Query: 11  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 70
           NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ
Sbjct: 14  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 73

Query: 71  IWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQQ 130
           IWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+L          
Sbjct: 74  IWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIEL---------- 133

Query: 131 LKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRG 190
              I+KVR EIQQLK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRRG
Sbjct: 134 ---IDKVRLEIQQLKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRRG 181

Query: 191 KRKL 195
           KRK+
Sbjct: 194 KRKI 181

[Close]

BLAST of Cp4.1LG00g04650 vs. TrEMBL
Match: A0A059AEJ6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01848 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.8e-66
Identity = 139/185 (75.14%), Postives = 156/185 (84.32%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLA+GLQLTH+HLGNLQLVAQYLTILGSLALALHDT QAREILRSSLTLAKKL DIPT
Sbjct: 552 RNRLARGLQLTHSHLGNLQLVAQYLTILGSLALALHDTAQAREILRSSLTLAKKLTDIPT 611

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLT LYQELGE+GNEMENAEYQ KK +DLQKRL DAHSSIHHI+LI+K + E+Q
Sbjct: 612 QIWVLSVLTALYQELGERGNEMENAEYQRKKVEDLQKRLADAHSSIHHIELIDKAKLELQ 671

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRR 189
              E+             D+KRA+G  S+GVNLDIPES+G+S  LPTSS +L+D+DTGRR
Sbjct: 672 NYHEL-------------DVKRALGS-SMGVNLDIPESVGLSTPLPTSSSRLVDLDTGRR 722

Query: 190 GKRKL 195
           GKRKL
Sbjct: 732 GKRKL 722

[Close]

BLAST of Cp4.1LG00g04650 vs. TrEMBL
Match: W9QXY9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022693 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-64
Identity = 135/185 (72.97%), Postives = 152/185 (82.16%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLA+GLQLTHNHLGNLQLV+QYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 551 RNRLARGLQLTHNHLGNLQLVSQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 610

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVL+TLY ELGEKGNEMEN EYQ KK +DLQKRL DAHSSIHH++LI+KV+ E  
Sbjct: 611 QIWVLSVLSTLYHELGEKGNEMENTEYQRKKMEDLQKRLADAHSSIHHLELIDKVKFEFH 670

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRR 189
           Q  ++             D+KRA+G PS  V+LDIPESIG S  LP    +L+D+DTGRR
Sbjct: 671 QFHDL-------------DIKRAVGDPSTRVDLDIPESIGFSTPLPNFQSRLVDLDTGRR 722

Query: 190 GKRKL 195
           G+RKL
Sbjct: 731 GRRKL 722

[Close]

BLAST of Cp4.1LG00g04650 vs. TrEMBL
Match: D7SJG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g08370 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.3e-63
Identity = 136/186 (73.12%), Postives = 155/186 (83.33%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           R RLA GLQ+THNHLGNLQLV+QYLTILGSLALALHDT QAREILRSSLTLAKKL DIPT
Sbjct: 550 RIRLATGLQITHNHLGNLQLVSQYLTILGSLALALHDTGQAREILRSSLTLAKKLCDIPT 609

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLT LYQELGE+GNEMEN+EYQ +KADDLQKRLVDAHSSIHHI+LIEKVR E++
Sbjct: 610 QIWVLSVLTALYQELGERGNEMENSEYQRRKADDLQKRLVDAHSSIHHIELIEKVRLEVR 669

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPT-SSLKLMDMDTGR 189
           QL E+             D+KRA+ G S+ V+LDIPES+G+    P  SS +L+D+DTGR
Sbjct: 670 QLHEL-------------DIKRAVAGSSMRVSLDIPESVGLLTPSPAPSSSRLVDLDTGR 722

Query: 190 RGKRKL 195
           RGKRK+
Sbjct: 730 RGKRKI 722

[Close]

BLAST of Cp4.1LG00g04650 vs. TrEMBL
Match: A5AMD4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031635 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.3e-63
Identity = 136/186 (73.12%), Postives = 155/186 (83.33%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           R RLA GLQ+THNHLGNLQLV+QYLTILGSLALALHDT QAREILRSSLTLAKKL DIPT
Sbjct: 207 RIRLATGLQITHNHLGNLQLVSQYLTILGSLALALHDTGQAREILRSSLTLAKKLCDIPT 266

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLT LYQELGE+GNEMEN+EYQ +KADDLQKRLVDAHSSIHHI+LIEKVR E++
Sbjct: 267 QIWVLSVLTALYQELGERGNEMENSEYQRRKADDLQKRLVDAHSSIHHIELIEKVRLEVR 326

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPT-SSLKLMDMDTGR 189
           QL E+             D+KRA+ G S+ V+LDIPES+G+    P  SS +L+D+DTGR
Sbjct: 327 QLHEL-------------DIKRAVAGSSMRVSLDIPESVGLLTPSPAPSSSRLVDLDTGR 379

Query: 190 RGKRKL 195
           RGKRK+
Sbjct: 387 RGKRKI 379

[Close]

BLAST of Cp4.1LG00g04650 vs. TAIR10
Match: AT5G51340.1 (AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 205.3 bits (521), Expect = 3.4e-53
Identity = 112/187 (59.89%), Postives = 138/187 (73.80%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQ+ HNH+GNLQLVAQYLT+LG+LAL+LHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 551 RNRLAKGLQIAHNHMGNLQLVAQYLTLLGNLALSLHDTVQAREILRSSLTLAKKLYDIPT 610

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           Q+WVLS+ T LYQ+LGEKGNEMEN E++ KK D+LQ RL +A  SIHHI+L+ K R E+ 
Sbjct: 611 QLWVLSIFTALYQQLGEKGNEMENEEFRKKKWDELQSRLAEARGSIHHIELVAKARIELY 670

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPT-SSLKLMDMDTGR 189
           Q+                +        S+  NLDIPES+G+    P  SS +L+ +DTG+
Sbjct: 671 QIDN-----------NPQEQSLVASAQSMQGNLDIPESVGIEGPSPAPSSSRLVGLDTGK 726

Query: 190 R-GKRKL 195
           R GKR++
Sbjct: 731 RWGKRRM 726

[Close]

BLAST of Cp4.1LG00g04650 vs. NCBI nr
Match: gi|449456905|ref|XP_004146189.1| (PREDICTED: MAU2 chromatid cohesion factor homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 2.9e-70
Identity = 155/185 (83.78%), Postives = 163/185 (88.11%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 550 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 609

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+L         
Sbjct: 610 QIWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIEL--------- 669

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRR 189
               I+KVR EIQQLK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRR
Sbjct: 670 ----IDKVRLEIQQLKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRR 718

Query: 190 GKRKL 195
           GKRK+
Sbjct: 730 GKRKI 718

[Close]

BLAST of Cp4.1LG00g04650 vs. NCBI nr
Match: gi|778674503|ref|XP_011650234.1| (PREDICTED: MAU2 chromatid cohesion factor homolog isoform X2 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 2.9e-70
Identity = 155/185 (83.78%), Postives = 163/185 (88.11%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 537 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 596

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+L         
Sbjct: 597 QIWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIEL--------- 656

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRR 189
               I+KVR EIQQLK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRR
Sbjct: 657 ----IDKVRLEIQQLKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRR 705

Query: 190 GKRKL 195
           GKRK+
Sbjct: 717 GKRKI 705

[Close]

BLAST of Cp4.1LG00g04650 vs. NCBI nr
Match: gi|659095143|ref|XP_008448423.1| (PREDICTED: LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 8.4e-70
Identity = 154/185 (83.24%), Postives = 162/185 (87.57%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT
Sbjct: 550 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 609

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+L         
Sbjct: 610 QIWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIEL--------- 669

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRR 189
               I+KVR EIQQLK VD+KRA G  SLGV+LDIP SIG SVS  TSSLKLMD+D+GRR
Sbjct: 670 ----IDKVRLEIQQLKGVDIKRA-GSISLGVDLDIPGSIGASVS--TSSLKLMDIDSGRR 718

Query: 190 GKRKL 195
           GKRK+
Sbjct: 730 GKRKI 718

[Close]

BLAST of Cp4.1LG00g04650 vs. NCBI nr
Match: gi|700200445|gb|KGN55578.1| (hypothetical protein Csa_3G000020 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 154/184 (83.70%), Postives = 162/184 (88.04%), Query Frame = 1


Query: 11  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 70
           NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ
Sbjct: 14  NRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPTQ 73

Query: 71  IWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQQ 130
           IWVLSVLTTLYQELGEKGNEMENAEYQ KKADDLQ+RLVDAHSSIHHI+L          
Sbjct: 74  IWVLSVLTTLYQELGEKGNEMENAEYQCKKADDLQRRLVDAHSSIHHIEL---------- 133

Query: 131 LKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSLKLMDMDTGRRG 190
              I+KVR EIQQLK VD+KRA G  SLGV+LDIP SIGVSVS  TSSLKLMD+D+GRRG
Sbjct: 134 ---IDKVRLEIQQLKGVDIKRA-GSISLGVDLDIPGSIGVSVS--TSSLKLMDIDSGRRG 181

Query: 191 KRKL 195
           KRK+
Sbjct: 194 KRKI 181

[Close]

BLAST of Cp4.1LG00g04650 vs. NCBI nr
Match: gi|1009180235|ref|XP_015871514.1| (PREDICTED: uncharacterized protein LOC107408622, partial [Ziziphus jujuba])

HSP 1 Score: 259.2 bits (661), Expect = 5.6e-66
Identity = 140/186 (75.27%), Postives = 156/186 (83.87%), Query Frame = 1


Query: 10  RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDIPT 69
           RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYD+PT
Sbjct: 125 RNRLAKGLQLTHNHLGNLQLVAQYLTILGSLALALHDTVQAREILRSSLTLAKKLYDVPT 184

Query: 70  QIWVLSVLTTLYQELGEKGNEMENAEYQSKKADDLQKRLVDAHSSIHHIDLIEKVRREIQ 129
           QIWVLSVLTTLYQELGE+GNEMEN +YQ KK DDLQKRL DA SSIHHI+L         
Sbjct: 185 QIWVLSVLTTLYQELGERGNEMENIDYQRKKMDDLQKRLADALSSIHHIEL--------- 244

Query: 130 QLKEIEKVRREIQQLKEVDMKRAIGGPSLGVNLDIPESIGVSVSLPTSSL-KLMDMDTGR 189
               I+KV+ ++QQ  EVD+KRAI GPS+ +NLDIPESIG+S  LP SS  +L+D+D GR
Sbjct: 245 ----IDKVKLQVQQFHEVDIKRAIAGPSMSINLDIPESIGLSAPLPGSSTSRLVDLDIGR 297

Query: 190 RGKRKL 195
            GKRK+
Sbjct: 305 LGKRKI 297

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g04650 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG00g04650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1H4_CUCSA	7.7e-70	83.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G000020 PE=4 SV=1	[more]
A0A059AEJ6_EUCGR	8.8e-66	75.14	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01848 PE=4 SV=1	[more]
W9QXY9_9ROSA	1.3e-64	72.97	Uncharacterized protein OS=Morus notabilis GN=L484_022693 PE=4 SV=1	[more]
D7SJG2_VITVI	5.3e-63	73.12	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g08370 PE=4 SV=...	[more]
A5AMD4_VITVI	5.3e-63	73.12	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031635 PE=4 SV=1	[more]

BLAST of Cp4.1LG00g04650 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51340.1	3.4e-53	59.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Cp4.1LG00g04650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456905\|ref\|XP_004146189.1\|	2.9e-70	83.78	PREDICTED: MAU2 chromatid cohesion factor homolog isoform X1 [Cucumis sativus]	[more]
gi\|778674503\|ref\|XP_011650234.1\|	2.9e-70	83.78	PREDICTED: MAU2 chromatid cohesion factor homolog isoform X2 [Cucumis sativus]	[more]
gi\|659095143\|ref\|XP_008448423.1\|	8.4e-70	83.24	PREDICTED: LOW QUALITY PROTEIN: MAU2 chromatid cohesion factor homolog [Cucumis ...	[more]
gi\|700200445\|gb\|KGN55578.1\|	1.1e-69	83.70	hypothetical protein Csa_3G000020 [Cucumis sativus]	[more]
gi\|1009180235\|ref\|XP_015871514.1\|	5.6e-66	75.27	PREDICTED: uncharacterized protein LOC107408622, partial [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007064	mitotic sister chromatid cohesion

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR019440	MAU2
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g04650.1	Cp4.1LG00g04650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 13..87 score: 3.
IPR019440	Chromatid cohesion factor MAU2	PANTHER	PTHR21394	UNCHARACTERIZED	coord: 10..165 score: 2.5
None	No IPR available	unknown	Coil	Coil	coord: 124..147 scor
None	No IPR available	PANTHER	PTHR21394:SF0	MAU2 CHROMATID COHESION FACTOR HOMOLOG	coord: 10..165 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG00g04650	Cp4.1LG02g11320	Cucurbita pepo (Zucchini)	cpecpeB009

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g04650	Silver-seed gourd	carcpeB0730