Cp4.1LG02g11250 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g11250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein LURP-one-related 7
LocationCp4.1LG02 : 10319510 .. 10322009 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATTTTCCTCTTCTCTTAATTTTCTTCCAAAATTTTCATTTCATTTTCTTGCAAATCTAATTGATTATGGCTAATTCTTCAGATCCCGCCATCTGCGCCGCACCTCTCCCCATTCCCGTCGATTTGTTCCTATCCAAAAAACATCCCGACCACGTAACTACTTCCTCCGGCAATATCATTTTTCGACTCAGTCGTCAATCTTTGAAATCGTCGTCAATTGACAAGATTGTGCTGCACGACGCCGCCGCCGCCGCCGCCGCCGCCGGTCCTCTCATTTCCATTCATCGCGTTAACGTGAGTAATTCAGTCTACTTTTATCCTAACTTTCACTGNGACAAGATTGTGCTGCACGACGCCGCCGCCGCCGCCGCCGCCGGTCCTCTCATTTCCATTCATCGCGTTAACGTGAGTAATTCAGTCTACTTTTATCCTAACTTTCACTGCTATTGCTGTGTTTAGTATACTGCTGTGATTCACAAGTTCCTAATCATGTGAAGAGTTGGAAGCTTCCAATTCTAGGAAGCTCTGTATTATCGGTTAATTTTGTCTCGATCGTATGAATAAACAATTAGACAAGATTCAGCATGACAACAACATTTTTCCTTTTTTTTACTCTGCCTTCAGGAATTAGATCCATTAAATTAATACGAAAAAATTGGGAGAAGTTTTGCTAGTGTATAGGTTCTAGTGTTCTNGATCCATTAAATTAATACGAAAAAATTGGGAGAAGTTTTGCTACTGTATTACTTACGTGGTTCCAGTGTTCCTGTTCGTAGCTGTTNAGTGTTCTTGTTCGTAGCTGTTACTGTTACAGAATGCTTTAGAATTTTAGGTCATTCAGTTTGTCTATCGATCCTTTCTTGTACGGTTTTTTACTGTTATGTTCCTTATTCTTGTTTAAGATTTTAGGATTGTGATCGCTGGGACTTGCTAATAATTACTTTGCATTTGGTCATTATCATTCCATATGAACTCGTGAAATAGTTGCAAGATAGTATTCTGCTAGAGTTGTTAAAGCGCAGGAAGGCTTCCTTTTTGCTGTTTTTCTGAAATAATGTGAACAAGTTTGCGTTGGTCACAGAAAGAATCTTGGCAAGGCTTCAAGGGGGATATTGGCGAGCAGGACTTGCTCTTCAAAGTGGAAAGAACACTCAACAAACTTAGAAGAACTGAATTCAAAGTCTTCCTTGTGGGTGAAAATTCAGACGACTCAAATGCTAGCTTGGAGATGAAAGGCTTTCCTTTCCAGAGATCCTGTACTATATATAAAGGCAACACTATAGTGGCTCAGGTACTGTATAGCAATAAACATAAGGAAGAATGTTCTTATAAGGCTGTTCATTTCATCCCTAAGCATGTTGCTAACTTGATGCTTGCTAATTGCTATAGCCTAGTTACTATAACATTCAAAGAGTTATAATTGATTAGATCATTTTTAATTTTAGTTTCATTTTCAACTTAAACACCAATGCCCATCATTTAGATTGCCCATCAGAAGCTCATAATTGTTCTTATAAGGAAGAATGTTCTTATAAGGCTGTTCATTTCATCCCTAAGCATGTTGCTAACTTGATGCTTGCTAATTGCTATAGCCTAGTTACTATAACATTCAAAGAGTTATAATTGATTAGATCATTTTTAATTTTAGTTTCATTTTCAACTTAAACACCAATGCCCATCATTTAGATTGCCCATCAGAAGCTCATAATTGTTCTTATAAGGAAGAATGTTCTTATAAGGCTGTTCATTTCATCCCTAAGCATGTTGCTAACTTGATGCTTGCTAATTGCTATAGCCTAGTTACTATTAACATTCAAAGAGTTATAATTGATTAGATCATTTTTAATTTTGGTTTCATATTCAACTAAACACCAATGCCCATCAGAAGCTCATAATTGTTTTGTTACTTAATCACCAATGCCATTCAAATTAGATTGAGCATTCAACAAAGATACCAACACTTTCAAAATAGTGTGCAACTTATGCAAGGTGAAAGCCTTATGGATGGTGAAATCTGTAAATAAATCATCAATACCTCTCCTCTGAGTCTATGTTAGTGTCTTTCATTTGACACATCTTAGAAAGCTATGGTTCATTGGCAAAAAGGGGGGAAATTCTTGTGAAATAAACTGAATTCTTATTGCATTGACATTGCATTCCTTCGTGCATAAACTCCAAAGGGTCATTTGCATTGGTAACTAAAGAGTTGTGGTGATTATTGCTTTTTTGATGCAGACAAGCCTGATGCACAAGCTTCACCAAATTTGCGTCAGAAGAGGAAGATTTCGACTAACCATTTTTCCTGGCACTGTAGATCCATCCTTGATCGTGGCTTTGATTGTAATATTCTTTGATGGACGAATATAACAGAACTGAGCCATAATTCAGAAGATGCTCATCTTTATGATGTTTGAAAAGGAAGATTGAATGCAAGAAGAAAAGAACCAAAATCTTGCCAACTAAAAAGGCAGCTCCAGAATAAAGATGCAAAAACAAAT

mRNA sequence

TTTATTTTCCTCTTCTCTTAATTTTCTTCCAAAATTTTCATTTCATTTTCTTGCAAATCTAATTGATTATGGCTAATTCTTCAGATCCCGCCATCTGCGCCGCACCTCTCCCCATTCCCGTCGATTTGTTCCTATCCAAAAAACATCCCGACCACGTAACTACTTCCTCCGGCAATATCATTTTTCGACTCAGTCGTCAATCTTTGAAATCGTCGTCAATTGACAAGATTGTGCTGCACGACGCCGCCGCCGCCGCCGCCGCCGCCGGTCCTCTCATTTCCATTCATCGCGTTAACAAAGAATCTTGGCAAGGCTTCAAGGGGGATATTGGCGAGCAGGACTTGCTCTTCAAAGTGGAAAGAACACTCAACAAACTTAGAAGAACTGAATTCAAAGTCTTCCTTGTGGGTGAAAATTCAGACGACTCAAATGCTAGCTTGGAGATGAAAGGCTTTCCTTTCCAGAGATCCTGTACTATATATAAAGGCAACACTATAGTGGCTCAGACAAGCCTGATGCACAAGCTTCACCAAATTTGCGTCAGAAGAGGAAGATTTCGACTAACCATTTTTCCTGGCACTGTAGATCCATCCTTGATCGTGGCTTTGATTGTAATATTCTTTGATGGACGAATATAACAGAACTGAGCCATAATTCAGAAGATGCTCATCTTTATGATGTTTGAAAAGGAAGATTGAATGCAAGAAGAAAAGAACCAAAATCTTGCCAACTAAAAAGGCAGCTCCAGAATAAAGATGCAAAAACAAAT

Coding sequence (CDS)

ATGGCTAATTCTTCAGATCCCGCCATCTGCGCCGCACCTCTCCCCATTCCCGTCGATTTGTTCCTATCCAAAAAACATCCCGACCACGTAACTACTTCCTCCGGCAATATCATTTTTCGACTCAGTCGTCAATCTTTGAAATCGTCGTCAATTGACAAGATTGTGCTGCACGACGCCGCCGCCGCCGCCGCCGCCGCCGGTCCTCTCATTTCCATTCATCGCGTTAACAAAGAATCTTGGCAAGGCTTCAAGGGGGATATTGGCGAGCAGGACTTGCTCTTCAAAGTGGAAAGAACACTCAACAAACTTAGAAGAACTGAATTCAAAGTCTTCCTTGTGGGTGAAAATTCAGACGACTCAAATGCTAGCTTGGAGATGAAAGGCTTTCCTTTCCAGAGATCCTGTACTATATATAAAGGCAACACTATAGTGGCTCAGACAAGCCTGATGCACAAGCTTCACCAAATTTGCGTCAGAAGAGGAAGATTTCGACTAACCATTTTTCCTGGCACTGTAGATCCATCCTTGATCGTGGCTTTGATTGTAATATTCTTTGATGGACGAATATAA

Protein sequence

MANSSDPAICAAPLPIPVDLFLSKKHPDHVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAAAAAAAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI
Homology
[Close]
BLAST of Cp4.1LG02g11250 vs. Swiss-Prot
Match: LOR7_ARATH (Protein LURP-one-related 7 OS=Arabidopsis thaliana GN=At2g30270 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-30
Identity = 83/178 (46.63%), Postives = 113/178 (63.48%), Query Frame = 1 

Query: 16  IPVDLFLSKKHPDHVTTSSGNIIFRLSRQSL-----KSSSIDKIVLHDAAAAAAAAGPLI 75
           IPVDLF SKK P     SSG++ F  S + L     KSSS  K +L  +        PL 
Sbjct: 18  IPVDLFASKKLPG---LSSGDLGFADSSEHLVFILRKSSSSLKSLLDSSGV------PLF 77

Query: 76  SIHRVNKESWQGFKGDIGEQ-DLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKGF 135
           SI R++   W+  KGD+ ++ DL+  V+RT  +  +TE +V   GE+S++    L +KG 
Sbjct: 78  SISRLHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSEN----LVIKGV 137

Query: 136 PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDG 188
           PFQ+SCTIY  ++IVAQTSLM+KL QI V R +FRLTIFPG++D SL+VA++ IF  G
Sbjct: 138 PFQKSCTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

[Close]
BLAST of Cp4.1LG02g11250 vs. Swiss-Prot
Match: LOR15_ARATH (Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.1e-13
Identity = 58/192 (30.21%), Postives = 95/192 (49.48%), Query Frame = 1 

Query: 6   DPAICAAPLPIPVDLFLSKKHPDH------VTTSSGNIIFRLSRQSLKSSSIDKIVLHDA 65
           DP  CA   P P+D+ + +K          +T  +GN++F++          DK VL D 
Sbjct: 29  DPKYCA---PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLH--DKRVLLDG 88

Query: 66  AAAAAAA--GPLISIHRVNKESWQGFKGDIGEQ-DLLFKVERTLNKLRRTEFKVFLVGEN 125
           +          ++S+H    + WQ F+G   +Q DLL+ V+R+     +T+  VFL G N
Sbjct: 89  SGTPVVTLREKMVSMH----DRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHN 148

Query: 126 SDDSNASLEMKGFPFQRSCTIYKG--NTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDP 185
            D+      +KG   +RSC +Y G  + IVAQ    H +  + + +  F +T++P  VD 
Sbjct: 149 KDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP-NVDY 208

Query: 186 SLIVALIVIFFD 187
           + I +L+VI  D
Sbjct: 209 AFIASLVVILDD 209

[Close]
BLAST of Cp4.1LG02g11250 vs. TrEMBL
Match: A0A0A0K429_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238420 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.4e-76
Identity = 146/189 (77.25%), Postives = 168/189 (88.89%), Query Frame = 1 

Query: 1   MANSSDPAICAAPLPIPVDLFLSKKHPDHVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAA 60
           MAN SDPAIC+  LPIP+DLFLSK+HPD++T SSG+II+R++R +LKSSS+DKI+L  A 
Sbjct: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60

Query: 61  AAAAAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDS 120
           AA     PLISI RVNKESW+GFKGD+GE++LLFKV+RTLNKLRRTEFKVFLVG N DDS
Sbjct: 61  AA----DPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDS 120

Query: 121 NASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVAL 180
           NAS EMKG+PFQRSCT+Y GNTIVAQTSLMHKL QI VRRGRFRLTIFP +VDP+LIVAL
Sbjct: 121 NASFEMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVAL 180

Query: 181 IVIFFDGRI 190
           IVIFFDGR+
Sbjct: 181 IVIFFDGRM 185

[Close]
BLAST of Cp4.1LG02g11250 vs. TrEMBL
Match: V4V0G6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002580mg PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.7e-45
Identity = 100/185 (54.05%), Postives = 131/185 (70.81%), Query Frame = 1 

Query: 9   ICAAPLPIPVDLFLSKKHPDHV------TTSSGNIIFRLSRQSLKSSSIDKIVLHDAAAA 68
           I  A  PIPVDLF+SKK+P           SSG++I+R++R   +S S            
Sbjct: 7   IYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVV 66

Query: 69  AAAAGPLISIHRVNKESWQGFKGDIGEQ-DLLFKVERTLNKLRRTEFKVFLVGENSDDSN 128
            +A  PLIS++R +K  WQGFKGD GE+ +L+FKV RT+  L RTEF+VFLV ENS+DS 
Sbjct: 67  DSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFLVDENSEDSA 126

Query: 129 ASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALI 187
           +   MKG PFQ+SCTIY+GN+I+AQTSLM+KL QI VRR +FRLTIFP +++P++IVAL+
Sbjct: 127 SHFTMKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALV 186

[Close]
BLAST of Cp4.1LG02g11250 vs. TrEMBL
Match: A0A067E5Y7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029587mg PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-44
Identity = 98/185 (52.97%), Postives = 131/185 (70.81%), Query Frame = 1 

Query: 9   ICAAPLPIPVDLFLSKKHPDHV------TTSSGNIIFRLSRQSLKSSSIDKIVLHDAAAA 68
           I  A  PIPVDLF+SKK+P           SSG++I+R++R   +S S            
Sbjct: 7   IYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVV 66

Query: 69  AAAAGPLISIHRVNKESWQGFKGDIGEQ-DLLFKVERTLNKLRRTEFKVFLVGENSDDSN 128
            +A  PLIS++R +K  WQGFKGD GE+ +L+FKV RT+  L RTEF+VF+V ENS+DS 
Sbjct: 67  DSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSA 126

Query: 129 ASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALI 187
           +   +KG PFQ+SCTIY+GN+I+AQTSLM+KL QI VRR +FRLTIFP +++P++IVAL+
Sbjct: 127 SHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALV 186

[Close]
BLAST of Cp4.1LG02g11250 vs. TrEMBL
Match: B9INQ1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14690g PE=4 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 4.1e-44
Identity = 100/183 (54.64%), Postives = 130/183 (71.04%), Query Frame = 1 

Query: 12  APLPIPVDLFLSKKHPD-----HVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAAAAAAAA 71
           A +PIPVDLF+SKKHP          S GNI+F+++      SS  +++L       A+ 
Sbjct: 10  AVVPIPVDLFVSKKHPGLNGDLGFADSLGNIVFKVNFDKSSKSSFKRVLLD------ASG 69

Query: 72  GPLISIHRVNKESWQGFKG-DIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLE 131
            PLI++ R  K SWQGFKG D  E+DL+F+V+RT+ KL RTE +VFLVGE S +S    +
Sbjct: 70  NPLITMFRDGKGSWQGFKGGDNREKDLIFRVKRTVKKLTRTELEVFLVGEISRESTPDFK 129

Query: 132 MKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFF 189
           +KGFPFQRSCTIY+ ++IVAQTSLM+KLHQI  RR ++RLTIFPG+VD SLI +LIVIF 
Sbjct: 130 VKGFPFQRSCTIYRSDSIVAQTSLMYKLHQIYARRSKYRLTIFPGSVDHSLIASLIVIFL 186

[Close]
BLAST of Cp4.1LG02g11250 vs. TrEMBL
Match: W9R506_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003310 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-43
Identity = 101/193 (52.33%), Postives = 134/193 (69.43%), Query Frame = 1 

Query: 3   NSSDPAICAAPLPIPVDLFLSKKHPDH------VTTSSGNIIFRLSRQS--LKSSSIDKI 62
           + SDP     P+PIPVDLF+SKKHP +         S  NII++++R+S    SSS +K 
Sbjct: 412 SESDPI----PIPIPVDLFVSKKHPAYKHGVLCFVDSFNNIIYKINRRSSLQSSSSSNKR 471

Query: 63  VLHDAAAAAAAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVG 122
           VL D     AA  PL+SIH  +K SW  FKG+   ++L+F+V R  N L R E +VF V 
Sbjct: 472 VLFD-----AAGNPLLSIHHNHKGSWSCFKGNGENEELIFRVRRAKNTLTRMELEVFFVA 531

Query: 123 ENSDDSNASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDP 182
           EN ++S  +L++KG P QR+CT+Y+GN IVAQTSLM+KL+QI V+RG+FRLT+FPG+ D 
Sbjct: 532 ENLEESAPNLQVKGSPCQRNCTVYRGNDIVAQTSLMYKLNQIFVKRGKFRLTVFPGSTDH 591

Query: 183 SLIVALIVIFFDG 188
           +LIVALIVIFF G
Sbjct: 592 ALIVALIVIFFHG 595

[Close]
BLAST of Cp4.1LG02g11250 vs. TAIR10
Match: AT2G30270.1 (AT2G30270.1 Protein of unknown function (DUF567))

HSP 1 Score: 134.0 bits (336), Expect = 9.4e-32
Identity = 83/178 (46.63%), Postives = 113/178 (63.48%), Query Frame = 1 

Query: 16  IPVDLFLSKKHPDHVTTSSGNIIFRLSRQSL-----KSSSIDKIVLHDAAAAAAAAGPLI 75
           IPVDLF SKK P     SSG++ F  S + L     KSSS  K +L  +        PL 
Sbjct: 18  IPVDLFASKKLPG---LSSGDLGFADSSEHLVFILRKSSSSLKSLLDSSGV------PLF 77

Query: 76  SIHRVNKESWQGFKGDIGEQ-DLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKGF 135
           SI R++   W+  KGD+ ++ DL+  V+RT  +  +TE +V   GE+S++    L +KG 
Sbjct: 78  SISRLHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSEN----LVIKGV 137

Query: 136 PFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDG 188
           PFQ+SCTIY  ++IVAQTSLM+KL QI V R +FRLTIFPG++D SL+VA++ IF  G
Sbjct: 138 PFQKSCTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

[Close]
BLAST of Cp4.1LG02g11250 vs. TAIR10
Match: AT5G01750.2 (AT5G01750.2 Protein of unknown function (DUF567))

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-14
Identity = 58/192 (30.21%), Postives = 95/192 (49.48%), Query Frame = 1 

Query: 6   DPAICAAPLPIPVDLFLSKKHPDH------VTTSSGNIIFRLSRQSLKSSSIDKIVLHDA 65
           DP  CA   P P+D+ + +K          +T  +GN++F++          DK VL D 
Sbjct: 29  DPKYCA---PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLH--DKRVLLDG 88

Query: 66  AAAAAAA--GPLISIHRVNKESWQGFKGDIGEQ-DLLFKVERTLNKLRRTEFKVFLVGEN 125
           +          ++S+H    + WQ F+G   +Q DLL+ V+R+     +T+  VFL G N
Sbjct: 89  SGTPVVTLREKMVSMH----DRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHN 148

Query: 126 SDDSNASLEMKGFPFQRSCTIYKG--NTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDP 185
            D+      +KG   +RSC +Y G  + IVAQ    H +  + + +  F +T++P  VD 
Sbjct: 149 KDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP-NVDY 208

Query: 186 SLIVALIVIFFD 187
           + I +L+VI  D
Sbjct: 209 AFIASLVVILDD 209

[Close]
BLAST of Cp4.1LG02g11250 vs. NCBI nr
Match: gi|449444136|ref|XP_004139831.1| (PREDICTED: protein LURP-one-related 7 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 2.0e-76
Identity = 146/189 (77.25%), Postives = 168/189 (88.89%), Query Frame = 1 

Query: 1   MANSSDPAICAAPLPIPVDLFLSKKHPDHVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAA 60
           MAN SDPAIC+  LPIP+DLFLSK+HPD++T SSG+II+R++R +LKSSS+DKI+L  A 
Sbjct: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60

Query: 61  AAAAAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDS 120
           AA     PLISI RVNKESW+GFKGD+GE++LLFKV+RTLNKLRRTEFKVFLVG N DDS
Sbjct: 61  AA----DPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDS 120

Query: 121 NASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVAL 180
           NAS EMKG+PFQRSCT+Y GNTIVAQTSLMHKL QI VRRGRFRLTIFP +VDP+LIVAL
Sbjct: 121 NASFEMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVAL 180

Query: 181 IVIFFDGRI 190
           IVIFFDGR+
Sbjct: 181 IVIFFDGRM 185

[Close]
BLAST of Cp4.1LG02g11250 vs. NCBI nr
Match: gi|659126180|ref|XP_008463053.1| (PREDICTED: protein LURP-one-related 7 [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 2.5e-74
Identity = 141/189 (74.60%), Postives = 164/189 (86.77%), Query Frame = 1 

Query: 1   MANSSDPAICAAPLPIPVDLFLSKKHPDHVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAA 60
           MANSSDP IC+A LPIP+DLFLSK+HP ++T SSG+II++++R + KSSS+DKI+L  A 
Sbjct: 1   MANSSDPTICSAALPIPIDLFLSKEHPHYLTNSSGDIIYKINRHAFKSSSVDKILLPHAD 60

Query: 61  AAAAAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDS 120
           AA     PLISI RVNKESW+GFKGD+GE++LLFKV+RTLNK RRTEF VFLVG N DD 
Sbjct: 61  AA----DPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKFRRTEFSVFLVGGNLDDP 120

Query: 121 NASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVAL 180
           N S EMKG+PFQRSCT+Y GNTIVAQTSLMHKLHQI VRRGRFRLTIFP +VDP+LIVAL
Sbjct: 121 NTSFEMKGWPFQRSCTVYSGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVAL 180

Query: 181 IVIFFDGRI 190
           IVIFFDGR+
Sbjct: 181 IVIFFDGRM 185

[Close]
BLAST of Cp4.1LG02g11250 vs. NCBI nr
Match: gi|645215382|ref|XP_008230450.1| (PREDICTED: protein LURP-one-related 7 [Prunus mume])

HSP 1 Score: 195.3 bits (495), Expect = 9.7e-47
Identity = 107/190 (56.32%), Postives = 137/190 (72.11%), Query Frame = 1 

Query: 4   SSDPAICAAPLPIPVDLFLSKKHPD------HVTTSSGNIIFRLSRQSLKSSSIDKIVLH 63
           +S PA C     IPVDLF+SKKHP           SSGN +++++RQSL SSS  +++L 
Sbjct: 7   TSVPAPCTNS-QIPVDLFVSKKHPGLPRGELGFVDSSGNPVYKVTRQSLTSSSNKRVLLD 66

Query: 64  DAAAAAAAAGPLISIHRVNKESWQGFKG-DIGEQDLLFKVERTLNKLRRTEFKVFLVGEN 123
                 AA  PL ++ R +K  WQG+KG D GE+DL+F+V+RT +KL RTE +VFLVGEN
Sbjct: 67  ------AAGNPLFALCRNDKGCWQGYKGGDAGEKDLVFRVKRTKSKLTRTELEVFLVGEN 126

Query: 124 SDDSNASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSL 183
           S DS    ++KGFP+QRSCTIY GN IVAQTSLM+KLHQ+  +RG+FRLTIFPG+VD +L
Sbjct: 127 SADSTCDFKVKGFPYQRSCTIYIGNDIVAQTSLMYKLHQLFPKRGKFRLTIFPGSVDHAL 186

Query: 184 IVALIVIFFD 187
           + ALIVIF D
Sbjct: 187 VAALIVIFLD 189

[Close]
BLAST of Cp4.1LG02g11250 vs. NCBI nr
Match: gi|694387579|ref|XP_009369535.1| (PREDICTED: protein LURP-one-related 7 [Pyrus x bretschneideri])

HSP 1 Score: 192.6 bits (488), Expect = 6.3e-46
Identity = 101/178 (56.74%), Postives = 130/178 (73.03%), Query Frame = 1 

Query: 16  IPVDLFLSKKHPD------HVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAAAAAAAAGPL 75
           IPVDLF+SKKHP           SSG+ +++++ QSLK+SS  +++L       AA  PL
Sbjct: 18  IPVDLFVSKKHPGLPRGELGFLDSSGDTVYKVTHQSLKTSSHKRVLLD------AAGNPL 77

Query: 76  ISIHRVNKESWQGFKG-DIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNASLEMKG 135
            S+ R +  SW+G+KG D  E+DL F+V+RT NKL RTE +VFLVGENS DS    ++KG
Sbjct: 78  FSLRRKDHGSWEGYKGGDSEEKDLKFRVKRTKNKLTRTELEVFLVGENSSDSACDFKVKG 137

Query: 136 FPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFD 187
           FPFQ+SCTIY+GN IVAQTSLM+KLHQ+  +RG+FRLTIFPG VD +L+ ALIVIF D
Sbjct: 138 FPFQKSCTIYRGNEIVAQTSLMYKLHQLMPKRGKFRLTIFPGPVDHALVAALIVIFLD 189

[Close]
BLAST of Cp4.1LG02g11250 vs. NCBI nr
Match: gi|567878831|ref|XP_006431974.1| (hypothetical protein CICLE_v10002580mg [Citrus clementina])

HSP 1 Score: 189.5 bits (480), Expect = 5.3e-45
Identity = 100/185 (54.05%), Postives = 131/185 (70.81%), Query Frame = 1 

Query: 9   ICAAPLPIPVDLFLSKKHPDHV------TTSSGNIIFRLSRQSLKSSSIDKIVLHDAAAA 68
           I  A  PIPVDLF+SKK+P           SSG++I+R++R   +S S            
Sbjct: 7   IYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVV 66

Query: 69  AAAAGPLISIHRVNKESWQGFKGDIGEQ-DLLFKVERTLNKLRRTEFKVFLVGENSDDSN 128
            +A  PLIS++R +K  WQGFKGD GE+ +L+FKV RT+  L RTEF+VFLV ENS+DS 
Sbjct: 67  DSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFLVDENSEDSA 126

Query: 129 ASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALI 187
           +   MKG PFQ+SCTIY+GN+I+AQTSLM+KL QI VRR +FRLTIFP +++P++IVAL+
Sbjct: 127 SHFTMKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALV 186

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g11250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LOR7_ARATH1.7e-3046.63Protein LURP-one-related 7 OS=Arabidopsis thaliana GN=At2g30270 PE=2 SV=1[more]
LOR15_ARATH4.1e-1330.21Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1[more]
BLAST of Cp4.1LG02g11250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K429_CUCSA1.4e-7677.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G238420 PE=4 SV=1[more]
V4V0G6_9ROSI3.7e-4554.05Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002580mg PE=4 SV=1[more]
A0A067E5Y7_CITSI1.8e-4452.97Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029587mg PE=4 SV=1[more]
B9INQ1_POPTR4.1e-4454.64Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14690g PE=4 SV=2[more]
W9R506_9ROSA2.0e-4352.33Uncharacterized protein OS=Morus notabilis GN=L484_003310 PE=4 SV=1[more]
BLAST of Cp4.1LG02g11250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G30270.19.4e-3246.63 Protein of unknown function (DUF567)[more]
AT5G01750.22.3e-1430.21 Protein of unknown function (DUF567)[more]
BLAST of Cp4.1LG02g11250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444136|ref|XP_004139831.1|2.0e-7677.25PREDICTED: protein LURP-one-related 7 [Cucumis sativus][more]
gi|659126180|ref|XP_008463053.1|2.5e-7474.60PREDICTED: protein LURP-one-related 7 [Cucumis melo][more]
gi|645215382|ref|XP_008230450.1|9.7e-4756.32PREDICTED: protein LURP-one-related 7 [Prunus mume][more]
gi|694387579|ref|XP_009369535.1|6.3e-4656.74PREDICTED: protein LURP-one-related 7 [Pyrus x bretschneideri][more]
gi|567878831|ref|XP_006431974.1|5.3e-4554.05hypothetical protein CICLE_v10002580mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025659Tubby-like_C
IPR007612LOR
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g11250.1Cp4.1LG02g11250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007612LURP1-related protein domainPFAMPF04525LORcoord: 27..183
score: 5.1
IPR025659Tubby C-terminal-like domainunknownSSF54518Tubby C-terminal domain-likecoord: 18..184
score: 6.02
NoneNo IPR availablePANTHERPTHR31087FAMILY NOT NAMEDcoord: 15..189
score: 1.3
NoneNo IPR availablePANTHERPTHR31087:SF16PROTEIN LURP-ONE-RELATED 7coord: 15..189
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g11250CmaCh01G007160Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g11250CmoCh01G007430Cucurbita moschata (Rifu)cmocpeB448
Cp4.1LG02g11250Cla008110Watermelon (97103) v1cpewmB552
Cp4.1LG02g11250ClCG03G000180Watermelon (Charleston Gray)cpewcgB504
Cp4.1LG02g11250Lsi02G012180Bottle gourd (USVL1VR-Ls)cpelsiB444
Cp4.1LG02g11250Carg07028Silver-seed gourdcarcpeB0738
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g11250Cucurbita pepo (Zucchini)cpecpeB434
Cp4.1LG02g11250Cucumber (Gy14) v1cgycpeB0261
Cp4.1LG02g11250Cucurbita maxima (Rimu)cmacpeB239
Cp4.1LG02g11250Cucurbita moschata (Rifu)cmocpeB206
Cp4.1LG02g11250Wild cucumber (PI 183967)cpecpiB534
Cp4.1LG02g11250Wild cucumber (PI 183967)cpecpiB535
Cp4.1LG02g11250Cucumber (Chinese Long) v2cpecuB532
Cp4.1LG02g11250Cucumber (Chinese Long) v2cpecuB533
Cp4.1LG02g11250Bottle gourd (USVL1VR-Ls)cpelsiB451
Cp4.1LG02g11250Watermelon (Charleston Gray)cpewcgB502
Cp4.1LG02g11250Watermelon (97103) v1cpewmB550
Cp4.1LG02g11250Melon (DHL92) v3.5.1cpemeB494
Cp4.1LG02g11250Melon (DHL92) v3.5.1cpemeB497
Cp4.1LG02g11250Cucumber (Gy14) v2cgybcpeB095
Cp4.1LG02g11250Cucumber (Gy14) v2cgybcpeB098
Cp4.1LG02g11250Melon (DHL92) v3.6.1cpemedB586
Cp4.1LG02g11250Melon (DHL92) v3.6.1cpemedB590
Cp4.1LG02g11250Silver-seed gourdcarcpeB0460
Cp4.1LG02g11250Cucumber (Chinese Long) v3cpecucB0662
Cp4.1LG02g11250Cucumber (Chinese Long) v3cpecucB0665
Cp4.1LG02g11250Wax gourdcpewgoB0702
Cp4.1LG02g11250Wax gourdcpewgoB0709