Carg07028 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGAAAAAATTGGGAGAAGTTTTGCTAGTGTATTACTCACGTGGTTCTAGTGTTCCTGTTCGTAGCTGTTACTGTTACAGAATGCTTTAGAATTTTAGGTCATTCAGTTTGTCTATCGATCCTTTCTTGTACGTTTTATGTTCCTTATTCTTGTTTAAGATTTTAGGATTGTGATCGCTGGGACTTGCTAATAATTACTTTGCATTTGGTCATTATCATTCCATATGAGCTCGTGAAATAGTTGCAAGATAGTATTCTTTTAGAGTTGTTAAAAGCGCAGGAAGGCTTCCTTTTTGCTGTTTTTCTGAAATAATGTGAACAAGTTTGCGTTGGTCACAGAAAGAATCTTGGCAAGGTTTCAAGGGGGATATTGGCGAGCAGGACTTGCTCTTCAAAGTGGAAAGAACACTCAACAAACTTAGAAGAACTGAATTCAAAGTCTTCCTTGTGGGTGAAAATTCAGACGACTCAAATGCTAGCTTGGAGATGAAAGGCTTTCCTTTCCAGAGATCCTGTACTGTATATAAAGGCAACGCTATAGTGGCTCAGGTACTGTATAGCAATAAACATATGGAAGAATGTTCTTATAAGGCTGTTCATTTCATCCCTAAGCATGTTGCTAACTTGATGCTTGCTAATTGCTATAGCCTAGTTACTATTAACATTCAAAGAGTTATAATTGATTAGATCATATTTAATTTTGGTTTCATATTCAACTTAAACACCAATGCCCATCATTTAGATTGCCCATCAGAAGCTCATAATTGTTCTTATAAGGAAGAATGTTCTTATTGTTGGATGATGATCGGCTAATTTAGGGAATGATCATGGGTTTATAAACAAAGAATACTCTCTCCATTGGTATGAGACATTTTGGGAAGCCCAAAACGAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGAGTCGTGTTTGGTTAACATGGTGTCGGAGCCATGCCCTAAACTTAGTCGTGCTGATAGATTGGTAAATCCTCAAATATCGAACAAAAGACTCAAAAAGTAAAAGAGTCGAGCCTCCTCGAAGGCAGTAAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTTGATTAAGGGGAGGTGTACTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAAGCAAAGAATACTCTCTCCATTGGTACGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCACGAGAGCTTATATTTAAAGTGAACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACACTTATAAGGCTGTTGATTACTATAACATTCAAAGAGTTATAATTGATTAGATCATTTTTAATTTTGGTTTCATATTCAACTTAAACACCAATCCCCATCATTTAGATTGCCCATCAGAAGCTCATAATTGTTTTGTTACTTCATCACCAATGCCATCAAATTAGATTGAGCATTCAACAAAGATACCAACACTTTCAAAATAGTGTGCAACTTATGCAAGGTGAAAGCCTTATGGATGGTGAAATCTGTAAATAAATCATCAATACCTCTCCTCTGAGTCTATGTTAGTGTCTTTCATTTGGCACATCTTAGAAAGCTATGGTTCATTGGCAAAAAGGGGGGAAATTCTTGTGAAATAAACTGAATTCTTATTGCAAAAACATTGCATTCCTTCGTACATAAACTCCAAAGGGTCATTTGCATTGGTAACTAAAGAGTTGTGGTGATTATTGCTTTTTTGATGCAGACAAGCCTGATGCACAAGCTTCACCAAATTTGCGTCAGAAGAGGAAGATTTCGACTAACCATTTTTCCTGGCACTGTAGATCCATCCTTGATCGTGGCTTTGATTGTAATATTCTTTGATGGACGAATATAACAGAACTGAGCCATAATTCAGAAGATGCTCATCTTTATGATGTTTGAAAAGGAAGATTGAATGCAAGAAGAAAAGAACCAAAATCTTGCCAACTAAAAAGGCAGCTCCAGAATAAAGATGCAAAAAACAAATATCAGGCAAGATTTTATTGATGAGTTAAAGAGTTGCTATGTTTGTAAATGCTTTTTCTCAATATAGGGAATTTGTAAACAAGATTAAAGATTTGCATGTGGATTTTTTTT ACGAAAAAATTGGGAGAAGTTTTGCTAGTGTATTACTCACGTGGTTCTAGTGTTCCTGTTCGTAGCTGTTACTGTTACAGAATGCTTTAGAATTTTAGGTCATTCAGTTTGTCTATCGATCCTTTCTTGTACGTTTTATGTTCCTTATTCTTGTTTAAGATTTTAGGATTGTGATCGCTGGGACTTGCTAATAATTACTTTGCATTTGGTCATTATCATTCCATATGAGCTCGTGAAATAGTTGCAAGATAGTATTCTTTTAGAGTTGTTAAAAGCGCAGGAAGGCTTCCTTTTTGCTGTTTTTCTGAAATAATGTGAACAAGTTTGCGTTGGTCACAGAAAGAATCTTGGCAAGGTTTCAAGGGGGATATTGGCGAGCAGGACTTGCTCTTCAAAGTGGAAAGAACACTCAACAAACTTAGAAGAACTGAATTCAAAGTCTTCCTTGTGGGTGAAAATTCAGACGACTCAAATGCTAGCTTGGAGATGAAAGGCTTTCCTTTCCAGAGATCCTGTACTGTATATAAAGGCAACGCTATAGTGGCTCAGACAAGCCTGATGCACAAGCTTCACCAAATTTGCGTCAGAAGAGGAAGATTTCGACTAACCATTTTTCCTGGCACTGTAGATCCATCCTTGATCGTGGCTTTGATTGTAATATTCTTTGATGGACGAATATAACAGAACTGAGCCATAATTCAGAAGATGCTCATCTTTATGATGTTTGAAAAGGAAGATTGAATGCAAGAAGAAAAGAACCAAAATCTTGCCAACTAAAAAGGCAGCTCCAGAATAAAGATGCAAAAAACAAATATCAGGCAAGATTTTATTGATGAGTTAAAGAGTTGCTATGTTTGTAAATGCTTTTTCTCAATATAGGGAATTTGTAAACAAGATTAAAGATTTGCATGTGGATTTTTTTT ATGAAAGGCTTTCCTTTCCAGAGATCCTGTACTGTATATAAAGGCAACGCTATAGTGGCTCAGACAAGCCTGATGCACAAGCTTCACCAAATTTGCGTCAGAAGAGGAAGATTTCGACTAACCATTTTTCCTGGCACTGTAGATCCATCCTTGATCGTGGCTTTGATTGTAATATTCTTTGATGGACGAATATAA MKGFPFQRSCTVYKGNAIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVIFFDGRI
BLAST of Carg07028 vs. NCBI nr
Match: XP_022948358.1 (protein LURP-one-related 7 [Cucurbita moschata]) HSP 1 Score: 131.7 bits (330), Expect = 8.7e-28 Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of Carg07028 vs. NCBI nr
Match: XP_022998604.1 (protein LURP-one-related 7 [Cucurbita maxima]) HSP 1 Score: 131.7 bits (330), Expect = 8.7e-28 Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of Carg07028 vs. NCBI nr
Match: XP_023523464.1 (protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.7 bits (330), Expect = 8.7e-28 Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of Carg07028 vs. NCBI nr
Match: XP_023523465.1 (protein LURP-one-related 7 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.7 bits (330), Expect = 8.7e-28 Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = 0
BLAST of Carg07028 vs. NCBI nr
Match: XP_022154859.1 (protein LURP-one-related 7 [Momordica charantia]) HSP 1 Score: 118.2 bits (295), Expect = 1.0e-23 Identity = 54/64 (84.38%), Postives = 62/64 (96.88%), Query Frame = 0
BLAST of Carg07028 vs. TAIR10
Match: AT2G30270.1 (Protein of unknown function (DUF567)) HSP 1 Score: 87.4 bits (215), Expect = 3.4e-18 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of Carg07028 vs. Swiss-Prot
Match: sp|Q8GWL2|LOR7_ARATH (Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 6.2e-17 Identity = 39/62 (62.90%), Postives = 51/62 (82.26%), Query Frame = 0
BLAST of Carg07028 vs. TrEMBL
Match: tr|A0A1S3CIB3|A0A1S3CIB3_CUCME (protein LURP-one-related 7 OS=Cucumis melo OX=3656 GN=LOC103501291 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 8.6e-24 Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0
BLAST of Carg07028 vs. TrEMBL
Match: tr|A0A0A0K429|A0A0A0K429_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238420 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 7.3e-23 Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of Carg07028 vs. TrEMBL
Match: tr|A0A2P5AN03|A0A2P5AN03_9ROSA (LURP1-related protein domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_346240 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 8.3e-19 Identity = 46/62 (74.19%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of Carg07028 vs. TrEMBL
Match: tr|A0A1Q3ASE9|A0A1Q3ASE9_CEPFO (Tub_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02184 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 8.3e-19 Identity = 45/63 (71.43%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of Carg07028 vs. TrEMBL
Match: tr|A0A218XG08|A0A218XG08_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004294 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-18 Identity = 45/62 (72.58%), Postives = 56/62 (90.32%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |