Cp4.1LG02g09890 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g09890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DUF4408 domain protein
Location	Cp4.1LG02 : 9963950 .. 9964843 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATCCGTTGTCAAAATCTGAGTTTAATGGTTTGACATTAGAAACAGCAATTTCGATTACGAAATCGGTATTGCTTTCAATTGGGTTAATATCCACTGTAAGTTTGTTCAAAGTGGCTGTAATCCCAAAAGTTGCGAGCCTTTTGACCACTACTCTTCCTCGCTTATGGGTCTCCTTCGGATTATGGCTTTCTCCTCCCTATGTGTTCCTTGTATTCAATTTCATTATCGTCGCCGTCGCTGCCTCCTCCGTCTTCCGCCGCCCAATAGACACATCCGAGAATAGCTACATACCCATTTCTTACGAACATACTCATGTTGCTGCTTCCTCTCCCTATATGTCGATGCATGAGGATCAAAGCTTTTGGATCATTGCTCGTTCTAGAGAAATCTGGAATGGGATCCCGAACGAGGACGAACAGGGGAAGGAGCAATGGGATTTCCCGACTCTGTTCACGGATAAATTCAGCAACCCATTATCTGAAAAGCTCTGTGCATATTCTTGCGAGAAGGATGAAGATGCCGGCGGCGGCGGCGGCGGAGGCGGTGATGGTGACTCGATGGACGCTACGTGGAAGGCGATCATGGAAAGTCAAGGGAAACAGACGTCGCAGCTGAAGAAGAACCAGACATGGGACTCACCGCCGCCGCCACGACGTTTGATTAGAGCCGCCGACGCTGGTGCCAACACGGTGGAGCTGGCTCGGAATGAGGTGAAGAAATCAGAGAGGTTCCTCCCAGCGGCGTCGCTTCGGAGGAAGATATCAATGACTTCGGAAGAGCTGAGGTGCCGGGCTGAGGCGTTCATAGAAATGGTTAACCGAAGCATTCGCTTGCAGAGGCAAGAATCAGAGCAGCGTTTCTTGCAGGCGTTGAAACGCAATTTCTAG

mRNA sequence

ATGGCTGATCCGTTGTCAAAATCTGAGTTTAATGGTTTGACATTAGAAACAGCAATTTCGATTACGAAATCGGTATTGCTTTCAATTGGGTTAATATCCACTGTAAGTTTGTTCAAAGTGGCTGTAATCCCAAAAGTTGCGAGCCTTTTGACCACTACTCTTCCTCGCTTATGGGTCTCCTTCGGATTATGGCTTTCTCCTCCCTATGTGTTCCTTGTATTCAATTTCATTATCGTCGCCGTCGCTGCCTCCTCCGTCTTCCGCCGCCCAATAGACACATCCGAGAATAGCTACATACCCATTTCTTACGAACATACTCATGTTGCTGCTTCCTCTCCCTATATGTCGATGCATGAGGATCAAAGCTTTTGGATCATTGCTCGTTCTAGAGAAATCTGGAATGGGATCCCGAACGAGGACGAACAGGGGAAGGAGCAATGGGATTTCCCGACTCTGTTCACGGATAAATTCAGCAACCCATTATCTGAAAAGCTCTGTGCATATTCTTGCGAGAAGGATGAAGATGCCGGCGGCGGCGGCGGCGGAGGCGGTGATGGTGACTCGATGGACGCTACGTGGAAGGCGATCATGGAAAGTCAAGGGAAACAGACGTCGCAGCTGAAGAAGAACCAGACATGGGACTCACCGCCGCCGCCACGACGTTTGATTAGAGCCGCCGACGCTGGTGCCAACACGGTGGAGCTGGCTCGGAATGAGGTGAAGAAATCAGAGAGGTTCCTCCCAGCGGCGTCGCTTCGGAGGAAGATATCAATGACTTCGGAAGAGCTGAGGTGCCGGGCTGAGGCGTTCATAGAAATGGTTAACCGAAGCATTCGCTTGCAGAGGCAAGAATCAGAGCAGCGTTTCTTGCAGGCGTTGAAACGCAATTTCTAG

Coding sequence (CDS)

ATGGCTGATCCGTTGTCAAAATCTGAGTTTAATGGTTTGACATTAGAAACAGCAATTTCGATTACGAAATCGGTATTGCTTTCAATTGGGTTAATATCCACTGTAAGTTTGTTCAAAGTGGCTGTAATCCCAAAAGTTGCGAGCCTTTTGACCACTACTCTTCCTCGCTTATGGGTCTCCTTCGGATTATGGCTTTCTCCTCCCTATGTGTTCCTTGTATTCAATTTCATTATCGTCGCCGTCGCTGCCTCCTCCGTCTTCCGCCGCCCAATAGACACATCCGAGAATAGCTACATACCCATTTCTTACGAACATACTCATGTTGCTGCTTCCTCTCCCTATATGTCGATGCATGAGGATCAAAGCTTTTGGATCATTGCTCGTTCTAGAGAAATCTGGAATGGGATCCCGAACGAGGACGAACAGGGGAAGGAGCAATGGGATTTCCCGACTCTGTTCACGGATAAATTCAGCAACCCATTATCTGAAAAGCTCTGTGCATATTCTTGCGAGAAGGATGAAGATGCCGGCGGCGGCGGCGGCGGAGGCGGTGATGGTGACTCGATGGACGCTACGTGGAAGGCGATCATGGAAAGTCAAGGGAAACAGACGTCGCAGCTGAAGAAGAACCAGACATGGGACTCACCGCCGCCGCCACGACGTTTGATTAGAGCCGCCGACGCTGGTGCCAACACGGTGGAGCTGGCTCGGAATGAGGTGAAGAAATCAGAGAGGTTCCTCCCAGCGGCGTCGCTTCGGAGGAAGATATCAATGACTTCGGAAGAGCTGAGGTGCCGGGCTGAGGCGTTCATAGAAATGGTTAACCGAAGCATTCGCTTGCAGAGGCAAGAATCAGAGCAGCGTTTCTTGCAGGCGTTGAAACGCAATTTCTAG

Protein sequence

MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVSFGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHEDQSFWIIARSREIWNGIPNEDEQGKEQWDFPTLFTDKFSNPLSEKLCAYSCEKDEDAGGGGGGGGDGDSMDATWKAIMESQGKQTSQLKKNQTWDSPPPPRRLIRAADAGANTVELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRSIRLQRQESEQRFLQALKRNF

Homology

[Close]

BLAST of Cp4.1LG02g09890 vs. TrEMBL
Match: A0A0A0LQ95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031790 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.2e-99
Identity = 207/304 (68.09%), Postives = 238/304 (78.29%), Query Frame = 1


Query: 1   MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVS 60
           M DP  K  F+GLTLETAISITKSVLL+IG ISTV LFKVA+IPK A+LL  TLPRL+ S
Sbjct: 1   MDDPPLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFANLLIITLPRLFFS 60

Query: 61  FGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHED 120
           F  WLSPPYVF+VFN ++ A  ASS+FRR  DTSE +Y PIS+E+T+V+ S+PY   HED
Sbjct: 61  FRSWLSPPYVFIVFNLLMFAAFASSLFRRQKDTSETNYTPISHENTNVSPSAPYKLTHED 120

Query: 121 QSFWIIARSREIWNGIPNEDEQGKEQ-------WDFPTLFTDKFSNPLSEKLCAYSCEKD 180
           + F I  RS EIWNGIP+EDE+GKE+       WDFPTLFT+KFS+P S+KLCAYSCE +
Sbjct: 121 RDFSISGRSGEIWNGIPDEDERGKEEEEEKLLKWDFPTLFTEKFSDPSSKKLCAYSCETE 180

Query: 181 EDAGGGGGGGGDGDSMDATWKAIMESQGKQTSQLKKNQTWDSPPPPRRLIRAADAGANTV 240
           E+    GGGGGD DSM+ATWKAIME Q KQT QLKK+QTWDS P P RLIRAA      V
Sbjct: 181 EEE-KEGGGGGDDDSMEATWKAIMERQEKQTPQLKKSQTWDS-PLPARLIRAAVREEEPV 240

Query: 241 ELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRSIRLQRQESEQRFLQAL 298
              RNEV+K E+F    S RRKISMTSEEL+ RAEAFIEMVNRSIRLQRQESEQRFLQA+
Sbjct: 241 AWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300

[Close]

BLAST of Cp4.1LG02g09890 vs. TrEMBL
Match: B9N362_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05570g PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-30
Identity = 116/322 (36.02%), Postives = 156/322 (48.45%), Query Frame = 1


Query: 1   MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVS 60
           MA     S FN    ETAI   K VLLS+G+IST  LFKVA+IP   +L+ +TLP +W+S
Sbjct: 1   MASFFEISSFNTSRFETAIWAVKLVLLSVGIISTFILFKVAIIPCTFNLILSTLPSVWIS 60

Query: 61  FGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHED 120
              WLSPPY++++ NFII+ + ASS F+ P     N    + Y  +    S    S +  
Sbjct: 61  LRGWLSPPYIYIIVNFIIITIVASSTFQHP-----NPDTKLPYSSSKKLKSQNQSSTNHA 120

Query: 121 QSFWIIARSREIWN--------GIPNEDEQ------------GKEQWDFPTLFTDKFSNP 180
              W     +E+           IP +  Q            GKE  +     TD   +P
Sbjct: 121 NDLWQEHDMQEVEKQLGTILSFEIPIDSSQDYYSPDTFLTNSGKELQEKTN--TDPSKDP 180

Query: 181 LSEKLC----AYSCEKDEDAGGGGGGGGDGDSMDATWKAIMESQGK-QTSQLKKNQTWDS 240
                C    A   +K  D           D+++  W +IME QGK  T QL+K  TWD+
Sbjct: 181 CPPDSCLTDSAKKQQKKMDMEPLTQEADQQDTLEDAWTSIMEKQGKTPTRQLRKIGTWDT 240

Query: 241 PPPPRRLIR---AADAGA------NTVELARNEVKKSERFLPAASLRRKISMTSEELRCR 289
           PP   + +     AD G       + V  AR E+KKS+ F  + SLRR+ SM+ +EL  R
Sbjct: 241 PPKVLQKVNGIVTADGGGGCGDDDDPVSWARRELKKSDTFNDSVSLRREKSMSQDELNRR 300

[Close]

BLAST of Cp4.1LG02g09890 vs. TrEMBL
Match: G7KLN1_MEDTR (DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080600 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.4e-30
Identity = 115/316 (36.39%), Postives = 167/316 (52.85%), Query Frame = 1


Query: 15  LETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVSFGLWLSPPYVFLVF 74
           +ET I + K VL+SIG+IST+ LFKVA+IP    L+ +TLP+LW S   W + P+++++ 
Sbjct: 15  METPICVAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTLPFLYIIV 74

Query: 75  NFIIVAVAASSVFRRPIDTS----ENSYIPISYEHT----HVAASSPYMSMHEDQSFWII 134
           NFII+ + ASS F  P  T+    E +  PI  E+     H           ++Q    +
Sbjct: 75  NFIIIIIVASSSFSDPKHTTTSILETTTNPIELENQTNEPHQEEKKVEEVEEQEQEEKRV 134

Query: 135 ARSREIWNG----------------IPNEDEQGKEQWDFPTLFTDKF-SNPLSEKLCAYS 194
            +  E+++                 +P+ D++ K   DF  LF +KF  +P  EK C   
Sbjct: 135 VKDSELFHNKFITDPIPEKCSKDFYLPDSDDKVK---DF-RLFCNKFIDDPSPEKCCNDY 194

Query: 195 CEKDEDAGGGGGGGGDGDSMDATWKAIMESQGK-QTSQLKKNQTWDSPPPPRRLIRAADA 254
              D       G  GD DS++ATWKAIME+Q K +   LKK+ TW +     R+++A   
Sbjct: 195 NLPDS------GDKGDDDSLEATWKAIMEAQEKTKKPHLKKSGTWTA-----RIVKAEPF 254

Query: 255 GAN---------TVELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRSIR 296
             N          V  A+ E+KKSE F   ASL+R+ SM+ EEL  RAEAFI+  N  ++
Sbjct: 255 RNNGGFCGGDDDPVAWAQRELKKSETFNDRASLKREKSMSPEELNKRAEAFIKKFNNQMK 314

[Close]

BLAST of Cp4.1LG02g09890 vs. TrEMBL
Match: V4TSG2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021576mg PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.0e-30
Identity = 111/297 (37.37%), Postives = 155/297 (52.19%), Query Frame = 1


Query: 1   MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVS 60
           M D     +     LET     K + LS G +ST  LFKVA+IP + S ++T +P L++S
Sbjct: 1   MGDLFQNFDPKSSRLETVTRAAKLLFLSAGFVSTFMLFKVAIIPYICSTVST-IPSLFIS 60

Query: 61  FGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHED 120
              WLSPPY++++ NFII+ +AASS FR   D S+ +       H H   + P    ++ 
Sbjct: 61  LRFWLSPPYIYIIVNFIIITIAASSTFRIQNDPSDET-------HAH-TITKPMNKTYKT 120

Query: 121 QSFWIIARSREIWNGIPNEDEQGKEQWDFPTLFTDKFSNPLSEKLCAYSCEKDEDAGGGG 180
           Q    I   +     +  EDE  +E+   PT  T+K + P  E     +  K ED     
Sbjct: 121 QQQQHIGIKKNTALAMIVEDEAKEER---PTSVTEKRTFPSQE-----TASKGEDFPENQ 180

Query: 181 GGGGDGD--SMDATWKAIMESQGKQTS-QLKKNQTWDSPPPPRRLIRAADAGA------N 240
               D +  S++ TWK I E QGK+   QLKK+ TWD+P P      AADAG       +
Sbjct: 181 TETEDENDGSLEETWKLITEGQGKRAEPQLKKSDTWDAPSP--AAAAAADAGGSDNDEND 240

Query: 241 TVELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRSIRLQRQESEQR 289
               A+ E++KSE F    SLRR+ SM+ +EL  R EAFI+  N  +RLQR ES+QR
Sbjct: 241 PTAWAKRELRKSETFSDRTSLRREKSMSQDELNRRVEAFIKKFNNEMRLQRLESDQR 278

[Close]

BLAST of Cp4.1LG02g09890 vs. TrEMBL
Match: G7KLN5_MEDTR (DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080650 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.0e-28
Identity = 107/322 (33.23%), Postives = 159/322 (49.38%), Query Frame = 1


Query: 15  LETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVSFGLWLSPPYVFLVF 74
           ++ ++ + K VL+SIG+IST+ LFKVA+IP    L+ +TLP+LW S   W + P+++++ 
Sbjct: 15  MDQSLGVAKLVLMSIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTIPFLYIIV 74

Query: 75  NFIIVAVAASSVFRRPIDTS-------------ENSYIPISYE------HTHVAASSPYM 134
           NFII+ +  SS F    ++S             E +  PI  E      H          
Sbjct: 75  NFIIITIVFSSNFSHKSNSSITFSDLKQTTTILETTTNPIEQENQTNEPHQEEKVVEEIE 134

Query: 135 SMHEDQSFWIIARSREIWNGI----PNEDEQGKEQW----------DFPTLFTDKFSNPL 194
              +D+   +  +  E++       P++ +  KE +          DF   F    ++P+
Sbjct: 135 EQEQDEKRVVDVKDSELFCDEFITHPSQKKCSKEDYSLTDSDDKVKDFELFFNKFITDPI 194

Query: 195 SEKLCAYSCEKDEDAGGGGGGGGDGDSMDATWKAIMESQGK-QTSQLKKNQTWDSPPPPR 254
            EK C      D       G  GD DS++ATWKAIME Q K +   LKK+ TW +     
Sbjct: 195 QEKRCNDYNSPDS------GDKGDDDSLEATWKAIMEGQEKTKKPYLKKSDTWTA----- 254

Query: 255 RLIRAADAGAN-----------TVELARNEVKKSERFLPAASLRRKISMTSEELRCRAEA 292
           R+++A     N            V  A  E+KKSE F   ASL+R+ SM+ EEL  RAEA
Sbjct: 255 RIVKAEPFRNNGGCGFGSGDDDPVAWAERELKKSETFNDRASLKREKSMSPEELNKRAEA 314

[Close]

BLAST of Cp4.1LG02g09890 vs. NCBI nr
Match: gi|449439593|ref|XP_004137570.1| (PREDICTED: uncharacterized protein LOC101216148 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 1.3e-98
Identity = 207/304 (68.09%), Postives = 238/304 (78.29%), Query Frame = 1


Query: 1   MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVS 60
           M DP  K  F+GLTLETAISITKSVLL+IG ISTV LFKVA+IPK A+LL  TLPRL+ S
Sbjct: 1   MDDPPLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFANLLIITLPRLFFS 60

Query: 61  FGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHED 120
           F  WLSPPYVF+VFN ++ A  ASS+FRR  DTSE +Y PIS+E+T+V+ S+PY   HED
Sbjct: 61  FRSWLSPPYVFIVFNLLMFAAFASSLFRRQKDTSETNYTPISHENTNVSPSAPYKLTHED 120

Query: 121 QSFWIIARSREIWNGIPNEDEQGKEQ-------WDFPTLFTDKFSNPLSEKLCAYSCEKD 180
           + F I  RS EIWNGIP+EDE+GKE+       WDFPTLFT+KFS+P S+KLCAYSCE +
Sbjct: 121 RDFSISGRSGEIWNGIPDEDERGKEEEEEKLLKWDFPTLFTEKFSDPSSKKLCAYSCETE 180

Query: 181 EDAGGGGGGGGDGDSMDATWKAIMESQGKQTSQLKKNQTWDSPPPPRRLIRAADAGANTV 240
           E+    GGGGGD DSM+ATWKAIME Q KQT QLKK+QTWDS P P RLIRAA      V
Sbjct: 181 EEE-KEGGGGGDDDSMEATWKAIMERQEKQTPQLKKSQTWDS-PLPARLIRAAVREEEPV 240

Query: 241 ELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRSIRLQRQESEQRFLQAL 298
              RNEV+K E+F    S RRKISMTSEEL+ RAEAFIEMVNRSIRLQRQESEQRFLQA+
Sbjct: 241 AWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300

[Close]

BLAST of Cp4.1LG02g09890 vs. NCBI nr
Match: gi|659066281|ref|XP_008466670.1| (PREDICTED: uncharacterized protein LOC103503737 [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 2.1e-96
Identity = 207/304 (68.09%), Postives = 233/304 (76.64%), Query Frame = 1


Query: 1   MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVS 60
           M DP  K  F+GLTLETAISITKSVLL+IG ISTV LFKVA+IPK ASL   TLPRL+VS
Sbjct: 1   MDDPSLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFASLFIITLPRLFVS 60

Query: 61  FGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHED 120
           F  WLSPPYVF+VFNF++VA  ASSVFRR  DTSE  + PIS+E+T+V+ S+PY   HED
Sbjct: 61  FRSWLSPPYVFIVFNFLMVAALASSVFRRQKDTSETKFTPISHENTNVSPSNPYKLTHED 120

Query: 121 QSFWIIARSREIWNGIPNEDEQGKEQ-------WDFPTLFTDKFSNPLSEKLCAYSCEKD 180
           + F I  RS EIWNGI +EDEQ KE+       WDFPTLFT+KFS+P SEK CAYS EK 
Sbjct: 121 RDFSITGRSGEIWNGISDEDEQDKEEEEEKLLKWDFPTLFTEKFSDPSSEKFCAYSSEKV 180

Query: 181 EDAGGGGGGGGDGDSMDATWKAIMESQGKQTSQLKKNQTWDSPPPPRRLIRAADAGANTV 240
           E+    GG  GD DSM+ATWKAIME Q KQT QLKK+QTWDS P P RLIRAA      V
Sbjct: 181 EEE-KDGGDVGDDDSMEATWKAIMERQEKQTPQLKKSQTWDS-PLPARLIRAAVREEEPV 240

Query: 241 ELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRSIRLQRQESEQRFLQAL 298
              RNEV+K E+F    S RRKISMTSEEL+ RAEAFIEMVNRSIRLQRQESEQRFLQA+
Sbjct: 241 AWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300

[Close]

BLAST of Cp4.1LG02g09890 vs. NCBI nr
Match: gi|743919340|ref|XP_011003694.1| (PREDICTED: uncharacterized protein LOC105110369 [Populus euphratica])

HSP 1 Score: 144.1 bits (362), Expect = 4.0e-31
Identity = 108/312 (34.62%), Postives = 161/312 (51.60%), Query Frame = 1


Query: 1   MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVS 60
           MA+    S F      T I   K +LL +G+IST  L KVA+IP   +L+ +TLP +W+S
Sbjct: 1   MANLFEISSFKTGKFGTTIWAVKMMLLCVGIISTFILLKVAIIPYTFNLILSTLPSVWIS 60

Query: 61  FGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHED 120
              WLSPPY++++ NFII+A+ ASS+F+ P   S+ SY   + +H     S+    + +D
Sbjct: 61  LRGWLSPPYIYIILNFIIIAIVASSIFQHPNPNSKVSYSSSNKKHKSQNKSNT-KDLWQD 120

Query: 121 QSFWIIARSREIWNGIPNEDEQGKEQWDFPTLFT-------DKFSNPLSEKLCAYSCEKD 180
                + +  +         +  ++ +   T  T       +K +   S++ C     K 
Sbjct: 121 HGMQEVEKLLDTTLSFEELIDSSQDYYSPDTFLTNSGELLQEKTNTDTSKESCLTDSAKQ 180

Query: 181 E----DAGGGGGGGGDGDSMDATWKAIMESQGK-QTSQLKKNQTWDSPPPPRR-----LI 240
           +    D           D+++ TW  IME QGK  T QLKK+ TWD+PP   +     + 
Sbjct: 181 QQEKMDKEPLTPEADQQDTLEDTWTLIMEKQGKTPTRQLKKSGTWDTPPTALQKANGMIT 240

Query: 241 RAADAGA------NTVELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRS 290
            A D G       + V  AR E++KS+ F  + SLRR+ SM+ +EL  RAE FI   N +
Sbjct: 241 AAGDGGGDGGDDDDPVAWARRELRKSDTFNDSVSLRREKSMSQDELNRRAEEFIRKFNYA 300

[Close]

BLAST of Cp4.1LG02g09890 vs. NCBI nr
Match: gi|566206015|ref|XP_006374271.1| (hypothetical protein POPTR_0015s05570g [Populus trichocarpa])

HSP 1 Score: 141.0 bits (354), Expect = 3.4e-30
Identity = 116/322 (36.02%), Postives = 156/322 (48.45%), Query Frame = 1


Query: 1   MADPLSKSEFNGLTLETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVS 60
           MA     S FN    ETAI   K VLLS+G+IST  LFKVA+IP   +L+ +TLP +W+S
Sbjct: 1   MASFFEISSFNTSRFETAIWAVKLVLLSVGIISTFILFKVAIIPCTFNLILSTLPSVWIS 60

Query: 61  FGLWLSPPYVFLVFNFIIVAVAASSVFRRPIDTSENSYIPISYEHTHVAASSPYMSMHED 120
              WLSPPY++++ NFII+ + ASS F+ P     N    + Y  +    S    S +  
Sbjct: 61  LRGWLSPPYIYIIVNFIIITIVASSTFQHP-----NPDTKLPYSSSKKLKSQNQSSTNHA 120

Query: 121 QSFWIIARSREIWN--------GIPNEDEQ------------GKEQWDFPTLFTDKFSNP 180
              W     +E+           IP +  Q            GKE  +     TD   +P
Sbjct: 121 NDLWQEHDMQEVEKQLGTILSFEIPIDSSQDYYSPDTFLTNSGKELQEKTN--TDPSKDP 180

Query: 181 LSEKLC----AYSCEKDEDAGGGGGGGGDGDSMDATWKAIMESQGK-QTSQLKKNQTWDS 240
                C    A   +K  D           D+++  W +IME QGK  T QL+K  TWD+
Sbjct: 181 CPPDSCLTDSAKKQQKKMDMEPLTQEADQQDTLEDAWTSIMEKQGKTPTRQLRKIGTWDT 240

Query: 241 PPPPRRLIR---AADAGA------NTVELARNEVKKSERFLPAASLRRKISMTSEELRCR 289
           PP   + +     AD G       + V  AR E+KKS+ F  + SLRR+ SM+ +EL  R
Sbjct: 241 PPKVLQKVNGIVTADGGGGCGDDDDPVSWARRELKKSDTFNDSVSLRREKSMSQDELNRR 300

[Close]

BLAST of Cp4.1LG02g09890 vs. NCBI nr
Match: gi|357500007|ref|XP_003620292.1| (DUF4408 domain protein [Medicago truncatula])

HSP 1 Score: 141.0 bits (354), Expect = 3.4e-30
Identity = 115/316 (36.39%), Postives = 167/316 (52.85%), Query Frame = 1


Query: 15  LETAISITKSVLLSIGLISTVSLFKVAVIPKVASLLTTTLPRLWVSFGLWLSPPYVFLVF 74
           +ET I + K VL+SIG+IST+ LFKVA+IP    L+ +TLP+LW S   W + P+++++ 
Sbjct: 15  METPICVAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTLPFLYIIV 74

Query: 75  NFIIVAVAASSVFRRPIDTS----ENSYIPISYEHT----HVAASSPYMSMHEDQSFWII 134
           NFII+ + ASS F  P  T+    E +  PI  E+     H           ++Q    +
Sbjct: 75  NFIIIIIVASSSFSDPKHTTTSILETTTNPIELENQTNEPHQEEKKVEEVEEQEQEEKRV 134

Query: 135 ARSREIWNG----------------IPNEDEQGKEQWDFPTLFTDKF-SNPLSEKLCAYS 194
            +  E+++                 +P+ D++ K   DF  LF +KF  +P  EK C   
Sbjct: 135 VKDSELFHNKFITDPIPEKCSKDFYLPDSDDKVK---DF-RLFCNKFIDDPSPEKCCNDY 194

Query: 195 CEKDEDAGGGGGGGGDGDSMDATWKAIMESQGK-QTSQLKKNQTWDSPPPPRRLIRAADA 254
              D       G  GD DS++ATWKAIME+Q K +   LKK+ TW +     R+++A   
Sbjct: 195 NLPDS------GDKGDDDSLEATWKAIMEAQEKTKKPHLKKSGTWTA-----RIVKAEPF 254

Query: 255 GAN---------TVELARNEVKKSERFLPAASLRRKISMTSEELRCRAEAFIEMVNRSIR 296
             N          V  A+ E+KKSE F   ASL+R+ SM+ EEL  RAEAFI+  N  ++
Sbjct: 255 RNNGGFCGGDDDPVAWAQRELKKSETFNDRASLKREKSMSPEELNKRAEAFIKKFNNQMK 314

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g09890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g09890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ95_CUCSA	9.2e-99	68.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031790 PE=4 SV=1	[more]
B9N362_POPTR	2.4e-30	36.02	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05570g PE=4 SV=1	[more]
G7KLN1_MEDTR	2.4e-30	36.39	DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080600 PE=4 SV=1	[more]
V4TSG2_9ROSI	7.0e-30	37.37	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021576mg PE=4 SV=1	[more]
G7KLN5_MEDTR	5.0e-28	33.23	DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080650 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g09890 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG02g09890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439593\|ref\|XP_004137570.1\|	1.3e-98	68.09	PREDICTED: uncharacterized protein LOC101216148 [Cucumis sativus]	[more]
gi\|659066281\|ref\|XP_008466670.1\|	2.1e-96	68.09	PREDICTED: uncharacterized protein LOC103503737 [Cucumis melo]	[more]
gi\|743919340\|ref\|XP_011003694.1\|	4.0e-31	34.62	PREDICTED: uncharacterized protein LOC105110369 [Populus euphratica]	[more]
gi\|566206015\|ref\|XP_006374271.1\|	3.4e-30	36.02	hypothetical protein POPTR_0015s05570g [Populus trichocarpa]	[more]
gi\|357500007\|ref\|XP_003620292.1\|	3.4e-30	36.39	DUF4408 domain protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025520	DUF4408
IPR008480	DUF761_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g09890.1	Cp4.1LG02g09890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 266..295 score: 4.
IPR025520	Domain of unknown function DUF4408	PFAM	PF14364	DUF4408	coord: 55..85 score: 4.
None	No IPR available	PANTHER	PTHR33098	FAMILY NOT NAMED	coord: 18..289 score: 1.4
None	No IPR available	PANTHER	PTHR33098:SF7	SUBFAMILY NOT NAMED	coord: 18..289 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG02g09890	Cucsa.112360	Cucumber (Gy14) v1	cgycpeB0261
Cp4.1LG02g09890	CmaCh13G011010	Cucurbita maxima (Rimu)	cmacpeB244
Cp4.1LG02g09890	CmoCh13G011500	Cucurbita moschata (Rifu)	cmocpeB210
Cp4.1LG02g09890	CmoCh01G007930	Cucurbita moschata (Rifu)	cmocpeB448
Cp4.1LG02g09890	Cla018647	Watermelon (97103) v1	cpewmB578
Cp4.1LG02g09890	Csa1G031790	Cucumber (Chinese Long) v2	cpecuB533
Cp4.1LG02g09890	MELO3C001944	Melon (DHL92) v3.5.1	cpemeB491
Cp4.1LG02g09890	ClCG04G012630	Watermelon (Charleston Gray)	cpewcgB507
Cp4.1LG02g09890	CSPI01G05170	Wild cucumber (PI 183967)	cpecpiB535
Cp4.1LG02g09890	Lsi02G000310	Bottle gourd (USVL1VR-Ls)	cpelsiB446
Cp4.1LG02g09890	MELO3C001944.2	Melon (DHL92) v3.6.1	cpemedB582
Cp4.1LG02g09890	CsaV3_1G005070	Cucumber (Chinese Long) v3	cpecucB0665
Cp4.1LG02g09890	Bhi08G001611	Wax gourd	cpewgoB0706
Cp4.1LG02g09890	CsGy1G004940	Cucumber (Gy14) v2	cgybcpeB098
Cp4.1LG02g09890	Carg06981	Silver-seed gourd	carcpeB0738
Cp4.1LG02g09890	Carg04736	Silver-seed gourd	carcpeB0545

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG02g09890	Cp4.1LG20g00520	Cucurbita pepo (Zucchini)	cpecpeB431

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG02g09890	Silver-seed gourd	carcpeB0546
Cp4.1LG02g09890	Cucurbita pepo (Zucchini)	cpecpeB433
Cp4.1LG02g09890	Cucurbita maxima (Rimu)	cmacpeB490