Cla018647 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla018647
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Fiber expressed protein (AHRD V1 -- B6TWK6_MAIZE); contains Interpro domain(s) IPR008480 Protein of unknown function DUF761, plant
Location	Chr4 : 23950904 .. 23951818 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGATCCGTCACCAAAACCTGTGTTTCAAGGTTTGACATTAGAGACGGCAATCTCGGTTACAAAATCGATATTGCTCGCAATTGGGTTTATATCCACTGTAATTTTGTTCAAAGTGGCTATAATCCCAAAATTTGCGAGTCTTCTTATCACAACTCTTCCTCGTTTATGGGTTTCCTTCAGATTATGGCTCTCTCCTCCCTACGTCTTCATCGTCTTCAACTTCCTTATCGTCGCCGCCTTCGTCTCCTCTGCCTTCCGCCGCCAAAAAGACACATCCGAAAATAATTACACTCCCATTTCTCATGAAAATACTCATGTTTCTGCATCCACTCCCTATAAATTGACGCATGAGGACCGAGACTTTTCGGTCACTGCTCGTTCCAGAGAAATCTGGAATGCGATCTCGGACGAGGATGAACAGGGGAAAGAAGAAGAAGAAGAAGAAGGGAAACCGATGAAATGGGATTTCCCGACTCTGTTCACTGAAAAATTCAGTGACCCATCATCGGAGAAGTTCTGTGCATATTCCAGCAAGAAGGTGGAGGAGGAAGAAGATGCCGGGGGCGGCGGGGGCGATGACTCGATGGACGCGACGTGGAAGGCGATCATGGAAAGGCAAGGGAAACAGACGCCGCAGCTGAAGAAGAGCCAGACATGGGACTCCCCTACGCCGGCACGCTTAATTAGAGCGGCCGGTGGCGACGAGGAACCGGTGGCGTGGGATCGGAATGAGGTAAGGAAGTCGGAGAAGTTCCAGCAAACGCTGTCGTTTCGGAGAAAAATATCGATGACTTCGGAAGAATTGAAGAGCCGGGCAGAGGCGTTCATAGAAATGGTAAACCGGAGCATTCGGTTACAGCGGCAAGAATCAGAGCAACGTTTCTTGCAGGCAATGAAACGTAGCTTTTAG

mRNA sequence

ATGCCTGATCCGTCACCAAAACCTGTGTTTCAAGGTTTGACATTAGAGACGGCAATCTCGGTTACAAAATCGATATTGCTCGCAATTGGGTTTATATCCACTGTAATTTTGTTCAAAGTGGCTATAATCCCAAAATTTGCGAGTCTTCTTATCACAACTCTTCCTCGTTTATGGGTTTCCTTCAGATTATGGCTCTCTCCTCCCTACGTCTTCATCGTCTTCAACTTCCTTATCGTCGCCGCCTTCGTCTCCTCTGCCTTCCGCCGCCAAAAAGACACATCCGAAAATAATTACACTCCCATTTCTCATGAAAATACTCATGTTTCTGCATCCACTCCCTATAAATTGACGCATGAGGACCGAGACTTTTCGGTCACTGCTCGTTCCAGAGAAATCTGGAATGCGATCTCGGACGAGGATGAACAGGGGAAAGAAGAAGAAGAAGAAGAAGGGAAACCGATGAAATGGGATTTCCCGACTCTGTTCACTGAAAAATTCAGTGACCCATCATCGGAGAAGTTCTGTGCATATTCCAGCAAGAAGGTGGAGGAGGAAGAAGATGCCGGGGGCGGCGGGGGCGATGACTCGATGGACGCGACGTGGAAGGCGATCATGGAAAGGCAAGGGAAACAGACGCCGCAGCTGAAGAAGAGCCAGACATGGGACTCCCCTACGCCGGCACGCTTAATTAGAGCGGCCGGTGGCGACGAGGAACCGGTGGCGTGGGATCGGAATGAGGTAAGGAAGTCGGAGAAGTTCCAGCAAACGCTGTCGTTTCGGAGAAAAATATCGATGACTTCGGAAGAATTGAAGAGCCGGGCAGAGGCGTTCATAGAAATGGTAAACCGGAGCATTCGGTTACAGCGGCAAGAATCAGAGCAACGTTTCTTGCAGGCAATGAAACGTAGCTTTTAG

Coding sequence (CDS)

ATGCCTGATCCGTCACCAAAACCTGTGTTTCAAGGTTTGACATTAGAGACGGCAATCTCGGTTACAAAATCGATATTGCTCGCAATTGGGTTTATATCCACTGTAATTTTGTTCAAAGTGGCTATAATCCCAAAATTTGCGAGTCTTCTTATCACAACTCTTCCTCGTTTATGGGTTTCCTTCAGATTATGGCTCTCTCCTCCCTACGTCTTCATCGTCTTCAACTTCCTTATCGTCGCCGCCTTCGTCTCCTCTGCCTTCCGCCGCCAAAAAGACACATCCGAAAATAATTACACTCCCATTTCTCATGAAAATACTCATGTTTCTGCATCCACTCCCTATAAATTGACGCATGAGGACCGAGACTTTTCGGTCACTGCTCGTTCCAGAGAAATCTGGAATGCGATCTCGGACGAGGATGAACAGGGGAAAGAAGAAGAAGAAGAAGAAGGGAAACCGATGAAATGGGATTTCCCGACTCTGTTCACTGAAAAATTCAGTGACCCATCATCGGAGAAGTTCTGTGCATATTCCAGCAAGAAGGTGGAGGAGGAAGAAGATGCCGGGGGCGGCGGGGGCGATGACTCGATGGACGCGACGTGGAAGGCGATCATGGAAAGGCAAGGGAAACAGACGCCGCAGCTGAAGAAGAGCCAGACATGGGACTCCCCTACGCCGGCACGCTTAATTAGAGCGGCCGGTGGCGACGAGGAACCGGTGGCGTGGGATCGGAATGAGGTAAGGAAGTCGGAGAAGTTCCAGCAAACGCTGTCGTTTCGGAGAAAAATATCGATGACTTCGGAAGAATTGAAGAGCCGGGCAGAGGCGTTCATAGAAATGGTAAACCGGAGCATTCGGTTACAGCGGCAAGAATCAGAGCAACGTTTCTTGCAGGCAATGAAACGTAGCTTTTAG

Protein sequence

MPDPSPKPVFQGLTLETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVFNFLIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHEDRDFSVTARSREIWNAISDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSSKKVEEEEDAGGGGGDDSMDATWKAIMERQGKQTPQLKKSQTWDSPTPARLIRAAGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAMKRSF

Homology

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BLAST of Cla018647 vs. TrEMBL
Match: A0A0A0LQ95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031790 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 6.4e-140
Identity = 256/304 (84.21%), Postives = 272/304 (89.47%), Query Frame = 1


Query: 1   MPDPSPKPVFQGLTLETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVS 60
           M DP  KPVF GLTLETAIS+TKS+LLAIGFISTVILFKVAIIPKFA+LLI TLPRL+ S
Sbjct: 1   MDDPPLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFANLLIITLPRLFFS 60

Query: 61  FRLWLSPPYVFIVFNFLIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHED 120
           FR WLSPPYVFIVFN L+ AAF SS FRRQKDTSE NYTPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNLLMFAAFASSLFRRQKDTSETNYTPISHENTNVSPSAPYKLTHED 120

Query: 121 RDFSVTARSREIWNAISDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSSK 180
           RDFS++ RS EIWN I DEDE+GKEEEEE  K +KWDFPTLFTEKFSDPSS+K CAYS +
Sbjct: 121 RDFSISGRSGEIWNGIPDEDERGKEEEEE--KLLKWDFPTLFTEKFSDPSSKKLCAYSCE 180

Query: 181 KVEEEEDAGGGGGDDSMDATWKAIMERQGKQTPQLKKSQTWDSPTPARLIRAAGGDEEPV 240
             EEE++ GGGG DDSM+ATWKAIMERQ KQTPQLKKSQTWDSP PARLIRAA  +EEPV
Sbjct: 181 TEEEEKEGGGGGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAAVREEEPV 240

Query: 241 AWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300
           AWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM
Sbjct: 241 AWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300

Query: 301 KRSF 305
           KRSF
Sbjct: 301 KRSF 302

[Close]

BLAST of Cla018647 vs. TrEMBL
Match: G7KLN1_MEDTR (DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080600 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.6e-44
Identity = 120/310 (38.71%), Postives = 172/310 (55.48%), Query Frame = 1


Query: 15  LETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVF 74
           +ET I V K +L++IG IST+ILFKVAIIP    L+++TLP+LW S R W + P+++I+ 
Sbjct: 15  METPICVAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTLPFLYIIV 74

Query: 75  NFLIVAAFVSSAFRRQKDTS----ENNYTPISHEN----THVSASTPYKLTHEDRDFSVT 134
           NF+I+    SS+F   K T+    E    PI  EN     H       ++  ++++    
Sbjct: 75  NFIIIIIVASSSFSDPKHTTTSILETTTNPIELENQTNEPHQEEKKVEEVEEQEQEEKRV 134

Query: 135 ARSREIWNAISDEDEQGKEEEEEEGKPMKWDFP---TLFTEKF-SDPSSEKFCAYSSKKV 194
            +  E+++     D   ++  ++   P   D      LF  KF  DPS EK C       
Sbjct: 135 VKDSELFHNKFITDPIPEKCSKDFYLPDSDDKVKDFRLFCNKFIDDPSPEKCC-----ND 194

Query: 195 EEEEDAGGGGGDDSMDATWKAIMERQGK-QTPQLKKSQTWDSPTPARLIRA--------- 254
               D+G  G DDS++ATWKAIME Q K + P LKKS TW     AR+++A         
Sbjct: 195 YNLPDSGDKGDDDSLEATWKAIMEAQEKTKKPHLKKSGTW----TARIVKAEPFRNNGGF 254

Query: 255 AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQES 303
            GGD++PVAW + E++KSE F    S +R+ SM+ EEL  RAEAFI+  N  ++LQR ES
Sbjct: 255 CGGDDDPVAWAQRELKKSETFNDRASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRMES 314

[Close]

BLAST of Cla018647 vs. TrEMBL
Match: V4TSG2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021576mg PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.3e-43
Identity = 117/287 (40.77%), Postives = 158/287 (55.05%), Query Frame = 1


Query: 15  LETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVF 74
           LET     K + L+ GF+ST +LFKVAIIP   S  ++T+P L++S R WLSPPY++I+ 
Sbjct: 15  LETVTRAAKLLFLSAGFVSTFMLFKVAIIPYICST-VSTIPSLFISLRFWLSPPYIYIIV 74

Query: 75  NFLIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHEDRDFSVTARSREIWN 134
           NF+I+    SS FR Q D S+      +H +T    + P   T++ +        +    
Sbjct: 75  NFIIITIAASSTFRIQNDPSDE-----THAHT---ITKPMNKTYKTQQQQHIGIKKNTAL 134

Query: 135 AISDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSSKKVEEEEDAGGGGGD 194
           A+  EDE  KEE            PT  TEK + PS E   A   +   E +       D
Sbjct: 135 AMIVEDE-AKEER-----------PTSVTEKRTFPSQET--ASKGEDFPENQTETEDEND 194

Query: 195 DSMDATWKAIMERQGKQT-PQLKKSQTWDSPTPARLIRA-AGG----DEEPVAWDRNEVR 254
            S++ TWK I E QGK+  PQLKKS TWD+P+PA    A AGG    + +P AW + E+R
Sbjct: 195 GSLEETWKLITEGQGKRAEPQLKKSDTWDAPSPAAAAAADAGGSDNDENDPTAWAKRELR 254

Query: 255 KSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQR 296
           KSE F    S RR+ SM+ +EL  R EAFI+  N  +RLQR ES+QR
Sbjct: 255 KSETFSDRTSLRREKSMSQDELNRRVEAFIKKFNNEMRLQRLESDQR 278

[Close]

BLAST of Cla018647 vs. TrEMBL
Match: G7KLN5_MEDTR (DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080650 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.2e-42
Identity = 118/321 (36.76%), Postives = 169/321 (52.65%), Query Frame = 1


Query: 15  LETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVF 74
           ++ ++ V K +L++IG IST+ILFKVAIIP    L+++TLP+LW S R W + P+++I+ 
Sbjct: 15  MDQSLGVAKLVLMSIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTIPFLYIIV 74

Query: 75  NFLIVAAFVSSAFRRQKDTS-------------ENNYTPISHENTHVSASTPYKLTHE-- 134
           NF+I+    SS F  + ++S             E    PI  EN         K+  E  
Sbjct: 75  NFIIITIVFSSNFSHKSNSSITFSDLKQTTTILETTTNPIEQENQTNEPHQEEKVVEEIE 134

Query: 135 ----DRDFSVTARSREIW-NAISDEDEQGKEEEEE----EGKPMKWDFPTLFTEKFSDPS 194
               D    V  +  E++ +       Q K  +E+    +      DF   F +  +DP 
Sbjct: 135 EQEQDEKRVVDVKDSELFCDEFITHPSQKKCSKEDYSLTDSDDKVKDFELFFNKFITDPI 194

Query: 195 SEKFCA-YSSKKVEEEEDAGGGGGDDSMDATWKAIMERQGK-QTPQLKKSQTWDSPTPAR 254
            EK C  Y+S       D+G  G DDS++ATWKAIME Q K + P LKKS TW     AR
Sbjct: 195 QEKRCNDYNSP------DSGDKGDDDSLEATWKAIMEGQEKTKKPYLKKSDTWT----AR 254

Query: 255 LIRA-----------AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAF 299
           +++A             GD++PVAW   E++KSE F    S +R+ SM+ EEL  RAEAF
Sbjct: 255 IVKAEPFRNNGGCGFGSGDDDPVAWAERELKKSETFNDRASLKREKSMSPEELNKRAEAF 314

[Close]

BLAST of Cla018647 vs. TrEMBL
Match: A0A067E105_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023658mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.0e-41
Identity = 115/287 (40.07%), Postives = 156/287 (54.36%), Query Frame = 1


Query: 15  LETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVF 74
           LET     K + L+ GF+ST +LFKVAIIP   S  ++T+P L++S R WLSPPY++I+ 
Sbjct: 15  LETVTRAAKLLFLSAGFVSTFMLFKVAIIPYICST-VSTIPSLFISLRFWLSPPYIYIIV 74

Query: 75  NFLIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHEDRDFSVTARSREIWN 134
           NF+I+     S FR Q D S+      +H +T    + P   T++ +        +    
Sbjct: 75  NFIIITIAAYSTFRIQNDPSDE-----THAHT---ITKPMNKTYKTQQQQHIGIKKNTAP 134

Query: 135 AISDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSSKKVEEEEDAGGGGGD 194
           A+  EDE  KEE            PT  TEK + PS E   A   +   E +       D
Sbjct: 135 AMIVEDE-AKEER-----------PTSVTEKRTFPSQET--ASKGEDFPENQTETEDEND 194

Query: 195 DSMDATWKAIMERQGKQT-PQLKKSQTWDSPTPARLIRA-AGG----DEEPVAWDRNEVR 254
            S++ TWK I E QGK+  PQLKKS TWD+ +PA    A AGG    + +P AW + E+R
Sbjct: 195 GSLEETWKLITEGQGKRAEPQLKKSDTWDALSPAAAASADAGGSDNDENDPTAWAKRELR 254

Query: 255 KSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQR 296
           KSE F    S RR+ SM+ +EL  R EAFI+  N  +RLQR ES+QR
Sbjct: 255 KSETFSDRTSLRREESMSQDELNRRVEAFIKKFNNEMRLQRLESDQR 278

[Close]

BLAST of Cla018647 vs. NCBI nr
Match: gi|659066281|ref|XP_008466670.1| (PREDICTED: uncharacterized protein LOC103503737 [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 8.9e-143
Identity = 263/304 (86.51%), Postives = 275/304 (90.46%), Query Frame = 1


Query: 1   MPDPSPKPVFQGLTLETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVS 60
           M DPS KPVF GLTLETAIS+TKS+LLAIGFISTVILFKVAIIPKFASL I TLPRL+VS
Sbjct: 1   MDDPSLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFASLFIITLPRLFVS 60

Query: 61  FRLWLSPPYVFIVFNFLIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHED 120
           FR WLSPPYVFIVFNFL+VAA  SS FRRQKDTSE  +TPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNFLMVAALASSVFRRQKDTSETKFTPISHENTNVSPSNPYKLTHED 120

Query: 121 RDFSVTARSREIWNAISDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSSK 180
           RDFS+T RS EIWN ISDEDEQ KEEEEE  K +KWDFPTLFTEKFSDPSSEKFCAYSS+
Sbjct: 121 RDFSITGRSGEIWNGISDEDEQDKEEEEE--KLLKWDFPTLFTEKFSDPSSEKFCAYSSE 180

Query: 181 KVEEEEDAGGGGGDDSMDATWKAIMERQGKQTPQLKKSQTWDSPTPARLIRAAGGDEEPV 240
           KVEEE+D G  G DDSM+ATWKAIMERQ KQTPQLKKSQTWDSP PARLIRAA  +EEPV
Sbjct: 181 KVEEEKDGGDVGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAAVREEEPV 240

Query: 241 AWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300
           AWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM
Sbjct: 241 AWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300

Query: 301 KRSF 305
           KRSF
Sbjct: 301 KRSF 302

[Close]

BLAST of Cla018647 vs. NCBI nr
Match: gi|449439593|ref|XP_004137570.1| (PREDICTED: uncharacterized protein LOC101216148 [Cucumis sativus])

HSP 1 Score: 505.0 bits (1299), Expect = 9.3e-140
Identity = 256/304 (84.21%), Postives = 272/304 (89.47%), Query Frame = 1


Query: 1   MPDPSPKPVFQGLTLETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVS 60
           M DP  KPVF GLTLETAIS+TKS+LLAIGFISTVILFKVAIIPKFA+LLI TLPRL+ S
Sbjct: 1   MDDPPLKPVFHGLTLETAISITKSVLLAIGFISTVILFKVAIIPKFANLLIITLPRLFFS 60

Query: 61  FRLWLSPPYVFIVFNFLIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHED 120
           FR WLSPPYVFIVFN L+ AAF SS FRRQKDTSE NYTPISHENT+VS S PYKLTHED
Sbjct: 61  FRSWLSPPYVFIVFNLLMFAAFASSLFRRQKDTSETNYTPISHENTNVSPSAPYKLTHED 120

Query: 121 RDFSVTARSREIWNAISDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSSK 180
           RDFS++ RS EIWN I DEDE+GKEEEEE  K +KWDFPTLFTEKFSDPSS+K CAYS +
Sbjct: 121 RDFSISGRSGEIWNGIPDEDERGKEEEEE--KLLKWDFPTLFTEKFSDPSSKKLCAYSCE 180

Query: 181 KVEEEEDAGGGGGDDSMDATWKAIMERQGKQTPQLKKSQTWDSPTPARLIRAAGGDEEPV 240
             EEE++ GGGG DDSM+ATWKAIMERQ KQTPQLKKSQTWDSP PARLIRAA  +EEPV
Sbjct: 181 TEEEEKEGGGGGDDDSMEATWKAIMERQEKQTPQLKKSQTWDSPLPARLIRAAVREEEPV 240

Query: 241 AWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300
           AWDRNEVRK EKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM
Sbjct: 241 AWDRNEVRKPEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQAM 300

Query: 301 KRSF 305
           KRSF
Sbjct: 301 KRSF 302

[Close]

BLAST of Cla018647 vs. NCBI nr
Match: gi|357500007|ref|XP_003620292.1| (DUF4408 domain protein [Medicago truncatula])

HSP 1 Score: 186.0 bits (471), Expect = 9.5e-44
Identity = 120/310 (38.71%), Postives = 172/310 (55.48%), Query Frame = 1


Query: 15  LETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVF 74
           +ET I V K +L++IG IST+ILFKVAIIP    L+++TLP+LW S R W + P+++I+ 
Sbjct: 15  METPICVAKLVLISIGIISTLILFKVAIIPYTFDLVLSTLPQLWFSIRTWFTLPFLYIIV 74

Query: 75  NFLIVAAFVSSAFRRQKDTS----ENNYTPISHEN----THVSASTPYKLTHEDRDFSVT 134
           NF+I+    SS+F   K T+    E    PI  EN     H       ++  ++++    
Sbjct: 75  NFIIIIIVASSSFSDPKHTTTSILETTTNPIELENQTNEPHQEEKKVEEVEEQEQEEKRV 134

Query: 135 ARSREIWNAISDEDEQGKEEEEEEGKPMKWDFP---TLFTEKF-SDPSSEKFCAYSSKKV 194
            +  E+++     D   ++  ++   P   D      LF  KF  DPS EK C       
Sbjct: 135 VKDSELFHNKFITDPIPEKCSKDFYLPDSDDKVKDFRLFCNKFIDDPSPEKCC-----ND 194

Query: 195 EEEEDAGGGGGDDSMDATWKAIMERQGK-QTPQLKKSQTWDSPTPARLIRA--------- 254
               D+G  G DDS++ATWKAIME Q K + P LKKS TW     AR+++A         
Sbjct: 195 YNLPDSGDKGDDDSLEATWKAIMEAQEKTKKPHLKKSGTW----TARIVKAEPFRNNGGF 254

Query: 255 AGGDEEPVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQES 303
            GGD++PVAW + E++KSE F    S +R+ SM+ EEL  RAEAFI+  N  ++LQR ES
Sbjct: 255 CGGDDDPVAWAQRELKKSETFNDRASLKREKSMSPEELNKRAEAFIKKFNNQMKLQRMES 314

[Close]

BLAST of Cla018647 vs. NCBI nr
Match: gi|567897834|ref|XP_006441405.1| (hypothetical protein CICLE_v10021576mg [Citrus clementina])

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 117/287 (40.77%), Postives = 158/287 (55.05%), Query Frame = 1


Query: 15  LETAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVF 74
           LET     K + L+ GF+ST +LFKVAIIP   S  ++T+P L++S R WLSPPY++I+ 
Sbjct: 15  LETVTRAAKLLFLSAGFVSTFMLFKVAIIPYICST-VSTIPSLFISLRFWLSPPYIYIIV 74

Query: 75  NFLIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHEDRDFSVTARSREIWN 134
           NF+I+    SS FR Q D S+      +H +T    + P   T++ +        +    
Sbjct: 75  NFIIITIAASSTFRIQNDPSDE-----THAHT---ITKPMNKTYKTQQQQHIGIKKNTAL 134

Query: 135 AISDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSSKKVEEEEDAGGGGGD 194
           A+  EDE  KEE            PT  TEK + PS E   A   +   E +       D
Sbjct: 135 AMIVEDE-AKEER-----------PTSVTEKRTFPSQET--ASKGEDFPENQTETEDEND 194

Query: 195 DSMDATWKAIMERQGKQT-PQLKKSQTWDSPTPARLIRA-AGG----DEEPVAWDRNEVR 254
            S++ TWK I E QGK+  PQLKKS TWD+P+PA    A AGG    + +P AW + E+R
Sbjct: 195 GSLEETWKLITEGQGKRAEPQLKKSDTWDAPSPAAAAAADAGGSDNDENDPTAWAKRELR 254

Query: 255 KSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQR 296
           KSE F    S RR+ SM+ +EL  R EAFI+  N  +RLQR ES+QR
Sbjct: 255 KSETFSDRTSLRREKSMSQDELNRRVEAFIKKFNNEMRLQRLESDQR 278

[Close]

BLAST of Cla018647 vs. NCBI nr
Match: gi|743919340|ref|XP_011003694.1| (PREDICTED: uncharacterized protein LOC105110369 [Populus euphratica])

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 115/304 (37.83%), Postives = 171/304 (56.25%), Query Frame = 1


Query: 17  TAISVTKSILLAIGFISTVILFKVAIIPKFASLLITTLPRLWVSFRLWLSPPYVFIVFNF 76
           T I   K +LL +G IST IL KVAIIP   +L+++TLP +W+S R WLSPPY++I+ NF
Sbjct: 17  TTIWAVKMMLLCVGIISTFILLKVAIIPYTFNLILSTLPSVWISLRGWLSPPYIYIILNF 76

Query: 77  LIVAAFVSSAFRRQKDTSENNYTPISHENTHVSASTPYKLTHEDRDFSVTARSREIWNAI 136
           +I+A   SS F+     S+ +Y+  + ++   + S    L    +D  +    + +   +
Sbjct: 77  IIIAIVASSIFQHPNPNSKVSYSSSNKKHKSQNKSNTKDLW---QDHGMQEVEKLLDTTL 136

Query: 137 SDEDEQGKEEEEEEGKPMKWDFPTLFTEKFSDPSSEKFCAYSS-----KKVEEEEDAGGG 196
           S E+     ++         +   L  EK +  +S++ C   S     +K+++E      
Sbjct: 137 SFEELIDSSQDYYSPDTFLTNSGELLQEKTNTDTSKESCLTDSAKQQQEKMDKEPLTPEA 196

Query: 197 GGDDSMDATWKAIMERQGK-QTPQLKKSQTWDSPTPA-----RLIRAA-------GGDEE 256
              D+++ TW  IME+QGK  T QLKKS TWD+P  A      +I AA       G D++
Sbjct: 197 DQQDTLEDTWTLIMEKQGKTPTRQLKKSGTWDTPPTALQKANGMITAAGDGGGDGGDDDD 256

Query: 257 PVAWDRNEVRKSEKFQQTLSFRRKISMTSEELKSRAEAFIEMVNRSIRLQRQESEQRFLQ 303
           PVAW R E+RKS+ F  ++S RR+ SM+ +EL  RAE FI   N ++RLQRQESEQRF +
Sbjct: 257 PVAWARRELRKSDTFNDSVSLRREKSMSQDELNRRAEEFIRKFNYAMRLQRQESEQRF-R 316

The following BLAST results are available for this feature:

BLAST of Cla018647 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ95_CUCSA	6.4e-140	84.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G031790 PE=4 SV=1	[more]
G7KLN1_MEDTR	6.6e-44	38.71	DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080600 PE=4 SV=1	[more]
V4TSG2_9ROSI	7.3e-43	40.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021576mg PE=4 SV=1	[more]
G7KLN5_MEDTR	6.2e-42	36.76	DUF4408 domain protein OS=Medicago truncatula GN=MTR_6g080650 PE=4 SV=1	[more]
A0A067E105_CITSI	4.0e-41	40.07	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023658mg PE=4 SV=1	[more]

BLAST of Cla018647 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066281\|ref\|XP_008466670.1\|	8.9e-143	86.51	PREDICTED: uncharacterized protein LOC103503737 [Cucumis melo]	[more]
gi\|449439593\|ref\|XP_004137570.1\|	9.3e-140	84.21	PREDICTED: uncharacterized protein LOC101216148 [Cucumis sativus]	[more]
gi\|357500007\|ref\|XP_003620292.1\|	9.5e-44	38.71	DUF4408 domain protein [Medicago truncatula]	[more]
gi\|567897834\|ref\|XP_006441405.1\|	1.1e-42	40.77	hypothetical protein CICLE_v10021576mg [Citrus clementina]	[more]
gi\|743919340\|ref\|XP_011003694.1\|	1.4e-42	37.83	PREDICTED: uncharacterized protein LOC105110369 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008480	DUF761_pln
IPR025520	DUF4408

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU32489	watermelon EST collection version 2.0	transcribed_cluster
WMU69118	watermelon EST collection version 2.0	transcribed_cluster
WMU70491	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla018647	Cla018647.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU32489	WMU32489	transcribed_cluster
WMU69118	WMU69118	transcribed_cluster
WMU70491	WMU70491	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 268..302 score: 3.
IPR025520	Domain of unknown function DUF4408	PFAM	PF14364	DUF4408	coord: 55..85 score: 1.
None	No IPR available	PANTHER	PTHR33098	FAMILY NOT NAMED	coord: 18..302 score: 2.7
None	No IPR available	PANTHER	PTHR33098:SF7	SUBFAMILY NOT NAMED	coord: 18..302 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla018647	Cla97C04G079630	Watermelon (97103) v2	wmwmbB291
Cla018647	Csa1G031790	Cucumber (Chinese Long) v2	cuwmB062
Cla018647	MELO3C001944	Melon (DHL92) v3.5.1	mewmB174
Cla018647	ClCG04G012630	Watermelon (Charleston Gray)	wcgwmB255
Cla018647	CSPI01G05170	Wild cucumber (PI 183967)	cpiwmB066
Cla018647	Cucsa.112360	Cucumber (Gy14) v1	cgywmB163
Cla018647	CmaCh13G011010	Cucurbita maxima (Rimu)	cmawmB208
Cla018647	CmoCh01G007930	Cucurbita moschata (Rifu)	cmowmB446
Cla018647	CmoCh13G011500	Cucurbita moschata (Rifu)	cmowmB196
Cla018647	Lsi02G000310	Bottle gourd (USVL1VR-Ls)	lsiwmB212
Cla018647	Cp4.1LG20g00520	Cucurbita pepo (Zucchini)	cpewmB522
Cla018647	Cp4.1LG02g09890	Cucurbita pepo (Zucchini)	cpewmB578
Cla018647	CsGy1G004940	Cucumber (Gy14) v2	cgybwmB064
Cla018647	MELO3C001944.2	Melon (DHL92) v3.6.1	medwmB170
Cla018647	Carg04736	Silver-seed gourd	carwmB0386
Cla018647	Carg06981	Silver-seed gourd	carwmB0519
Cla018647	CsaV3_1G005070	Cucumber (Chinese Long) v3	cucwmB070
Cla018647	Bhi08G001611	Wax gourd	wgowmB519

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla018647	Cucurbita maxima (Rimu)	cmawmB451