Cp4.1LG02g09830 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCTACGGCGAGGAGGAGATTTCATTTCCTCAATTCTTCCTATTTTTCTCCATTGATATGGGTCTCTTTTTCTCCAGGAACATCGCCAAATTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCTCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGGTACGTTTCTCCATTTCACTCTCTGATTTCGTTATTCTAGGGTTTGTTGTTCTTGTAAGTTGAGGCTCTGATTTTTCCGATTTCTTCTTCTAGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGTATTGTTATATCGATTCTTGGCGTCGATTATTCCGATTCGCTCTTTTGTACCGATTGTTTGATGATTTTGAAATTTTAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAGTTAGTAATTCGAATTTCTAGGGTTTCCATTGTTGATTCTGTCGAAGAAATTTTTGTTCATCCAAATTCCAATTTAATTTCACTTACAGAAAAGATTGGGAAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGGTGAGTTCTGGCTTAAATTCAAACGAAAACCCTAAATGTTCTTCGTTCAAAACTAATTGAATTTCCATTGGAACTTGTAGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGCAGAGCTTGGATGAAGAAGAAACCCCCTGTTCATAAACGTAGTAGTAGTTGTAGTCTTAGTGGTGGTCTATTTCTTGGGAAGATCGGGGGATCGTTAAGCCATGTTTGAAATGACTTTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTGGAGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTCGGGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGTCCTTCAAGGGATAATGCCGCGGGTGGAAATAGACCATCTTGTAAATCACCCAATTCTTTCATTCAATTTAAATCATTCTTTCTTATCATTTTTGCTTTTTCGTTCCGTGGCTTGAATGTTGAATTGGGTCGGTTCATAAGTTAC GCCTACGGCGAGGAGGAGATTTCATTTCCTCAATTCTTCCTATTTTTCTCCATTGATATGGGTCTCTTTTTCTCCAGGAACATCGCCAAATTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCTCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAAAAAGATTGGGAAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGCAGAGCTTGGATGAAGAAGAAACCCCCTGTTCATAAACGTAGTAGTAGTTGTAGTCTTAGTGGTGGTCTATTTCTTGGGAAGATCGGGGGATCGTTAAGCCATGTTTGAAATGACTTTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTGGAGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCGCATAAAAAAGGGTCGGGATCGAAGAAGGCGAGAGATAATTGTGATTGTTTGCTTGTTTAAGTGTCCTTCAAGGGATAATGCCGCGGGTGGAAATAGACCATCTTGTAAATCACCCAATTCTTTCATTCAATTTAAATCATTCTTTCTTATCATTTTTGCTTTTTCGTTCCGTGGCTTGAATGTTGAATTGGGTCGGTTCATAAGTTAC ATGGGTCTCTTTTTCTCCAGGAACATCGCCAAATTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCTCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAAAAAGATTGGGAAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGCAGAGCTTGGATGAAGAAGAAACCCCCTGTTCATAA MGLFFSRNIAKFLLSSFFSSQKFPSQIENVVSVVSSRTGRHRQRYNQEYRLVVGCIPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQWMKEALDLLISQRTELEQSLDEEETPCS
BLAST of Cp4.1LG02g09830 vs. Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 6.0e-47 Identity = 101/191 (52.88%), Postives = 134/191 (70.16%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. Swiss-Prot
Match: NUD18_ARATH (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44 Identity = 92/162 (56.79%), Postives = 117/162 (72.22%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. Swiss-Prot
Match: NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.6e-44 Identity = 92/165 (55.76%), Postives = 119/165 (72.12%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. Swiss-Prot
Match: NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.4e-42 Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.2e-32 Identity = 80/181 (44.20%), Postives = 114/181 (62.98%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TrEMBL
Match: I3SE70_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 6.3e-59 Identity = 120/193 (62.18%), Postives = 149/193 (77.20%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TrEMBL
Match: A0A0L9VHN9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g038000 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58 Identity = 118/199 (59.30%), Postives = 146/199 (73.37%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TrEMBL
Match: A0A0S3TBY9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G223300 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.4e-58 Identity = 118/199 (59.30%), Postives = 146/199 (73.37%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TrEMBL
Match: A0A0B2SA65_GLYSO (Nudix hydrolase 4 OS=Glycine soja GN=glysoja_027712 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.8e-58 Identity = 119/199 (59.80%), Postives = 146/199 (73.37%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TrEMBL
Match: C6T3D6_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max GN=GLYMA_09G173400 PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.8e-58 Identity = 119/199 (59.80%), Postives = 146/199 (73.37%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TAIR10
Match: AT1G18300.1 (AT1G18300.1 nudix hydrolase homolog 4) HSP 1 Score: 188.7 bits (478), Expect = 3.4e-48 Identity = 101/191 (52.88%), Postives = 134/191 (70.16%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TAIR10
Match: AT1G14860.1 (AT1G14860.1 nudix hydrolase homolog 18) HSP 1 Score: 181.0 bits (458), Expect = 7.1e-46 Identity = 92/162 (56.79%), Postives = 117/162 (72.22%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TAIR10
Match: AT2G01670.1 (AT2G01670.1 nudix hydrolase homolog 17) HSP 1 Score: 180.6 bits (457), Expect = 9.3e-46 Identity = 92/165 (55.76%), Postives = 119/165 (72.12%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TAIR10
Match: AT1G73540.1 (AT1G73540.1 nudix hydrolase homolog 21) HSP 1 Score: 172.9 bits (437), Expect = 1.9e-43 Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. TAIR10
Match: AT1G12880.1 (AT1G12880.1 nudix hydrolase homolog 12) HSP 1 Score: 139.4 bits (350), Expect = 2.4e-33 Identity = 80/181 (44.20%), Postives = 114/181 (62.98%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: gi|1012175700|ref|XP_015966876.1| (PREDICTED: nudix hydrolase 18, mitochondrial-like [Arachis duranensis]) HSP 1 Score: 241.1 bits (614), Expect = 1.6e-60 Identity = 123/195 (63.08%), Postives = 149/195 (76.41%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: gi|388500992|gb|AFK38562.1| (unknown [Lotus japonicus]) HSP 1 Score: 235.3 bits (599), Expect = 9.0e-59 Identity = 120/193 (62.18%), Postives = 149/193 (77.20%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: gi|950927376|ref|XP_014493811.1| (PREDICTED: nudix hydrolase 18, mitochondrial-like [Vigna radiata var. radiata]) HSP 1 Score: 234.2 bits (596), Expect = 2.0e-58 Identity = 118/199 (59.30%), Postives = 146/199 (73.37%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: gi|356531134|ref|XP_003534133.1| (PREDICTED: nudix hydrolase 18, mitochondrial [Glycine max]) HSP 1 Score: 233.8 bits (595), Expect = 2.6e-58 Identity = 119/199 (59.80%), Postives = 146/199 (73.37%), Query Frame = 1
BLAST of Cp4.1LG02g09830 vs. NCBI nr
Match: gi|593704577|ref|XP_007152662.1| (hypothetical protein PHAVU_004G148500g [Phaseolus vulgaris]) HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57 Identity = 118/199 (59.30%), Postives = 143/199 (71.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|