CmoCh01G007760 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G007760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Nudix hydrolase 4) (3.6.1.52)
Location	Cmo_Chr01 : 4029685 .. 4031168 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAACCATCCATCCACTGCCACACAACTTGTCTCTTCTTAGATTCAAATTCCTCTGCCCCTCCCCCCTCCCTCCTCTGCTCTCTCATAATCATTGTCCCGACCCGACGCCTACGGCGAGGAGGAGATTTCATTTCCTCAATTCTTCCTATTTTTCTCCATTGATATGGGTCTCTTTTTCTCCAGGAACATCGCCAAGTTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCGCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGGTATGTTTCTCCATTTCAGCCACTGATTTCGTTATTCTAGGGTTTGTTGTTCTTATAAGTTGAGGCTCTGATTTTTGCGATTTCTTCTTCTAGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGTATTGTTATATCGATTCTTGGCGTCGATTATTCCGATTCGCTCTTTTGTACCGATTGTTTGATGATTTTGAAATTTTAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAGTTAGTAATTCGAATTTCTAGGGTTTCCATTGTTGATTCTGTCGAAGAAATTTTTGTTCATCCAAATTCGAATTTAATTTCCCTTACAGAAAAGATTGGGCAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGGTGAGTTCTGGCTTAAACTCTAACGAAAACCCTAAATGTTCTTCGTTCAAAACTAATTGAATTTCCATTGGAACTTGTAGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGAGCTTGGATGAAGAAGGAACCCCCTGTTCATAAACGTAGTAGTAGTTGTAGTCTTAGTGGTGGTCTATTTCTTGGGAAGATCGGGGGATCGTTAAGCCATGTTTGAAACGACTTTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCATAAAAAAGGGTCGGGATCGAAGAAGGCGAGAAGTAATTGTGATTGCTTTGCTTGTTTAAGTGTCCTTCACGGGGATAATGCCGCGCGTGGAAATAGATCATCTTGTAAATCACCCAATTCTTTCATTCAATTTAAATCATTCTTTCTTATCATTTTTGCTTTTTCATTCCGTGGCTTGAACGTTGAATTGGGTCAGTTCGTAAGTTACCTACAAAATTGGCTTGAGTTGAACCGAATAAATCTGAC

mRNA sequence

AACAACCATCCATCCACTGCCACACAACTTGTCTCTTCTTAGATTCAAATTCCTCTGCCCCTCCCCCCTCCCTCCTCTGCTCTCTCATAATCATTGTCCCGACCCGACGCCTACGGCGAGGAGGAGATTTCATTTCCTCAATTCTTCCTATTTTTCTCCATTGATATGGGTCTCTTTTTCTCCAGGAACATCGCCAAGTTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCGCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAAAAAGATTGGGCAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGAGCTTGGATGAAGAAGGAACCCCCTGTTCATAAACGTAGTAGTAGTTGTAGTCTTAGTGGTGGTCTATTTCTTGGGAAGATCGGGGGATCGTTAAGCCATGTTTGAAACGACTTTTTAAGTGATTATTTTAGAAAGTCGTTCTAAATCCGTCGTCATTGAGGCATAAAAAAGGGTCGGGATCGAAGAAGGCGAGAAGTAATTGTGATTGCTTTGCTTGTTTAAGTGTCCTTCACGGGGATAATGCCGCGCGTGGAAATAGATCATCTTGTAAATCACCCAATTCTTTCATTCAATTTAAATCATTCTTTCTTATCATTTTTGCTTTTTCATTCCGTGGCTTGAACGTTGAATTGGGTCAGTTCGTAAGTTACCTACAAAATTGGCTTGAGTTGAACCGAATAAATCTGAC

Coding sequence (CDS)

ATGGGTCTCTTTTTCTCCAGGAACATCGCCAAGTTTCTCCTCTCTTCCTTCTTCTCTTCCCAGAAATTCCCTTCTCAGATCGAAAACGTCGTCTCTGTCGTCTCCGCTCGTACTGGACGTCATCGGCAGCGCTACAATCAAGAGTATCGCCTTGTTGTCGGATGCATTCCTTATCGATATAAAGATGCTCTGAAATCGTTTTCGGTTGATAATATTGAAGTTCTTGGGATTAGTTCACAGAAAGGACAAGCGATGATGTTTCCGAAGGGCGGTTGGGAGAACGACGAATCGATGGAGACTGCGGCTTTGAGAGAGACATTGGAGGAAGCTGGTGTGGTTGGCAACATCGAAAAAAGATTGGGCAAATGGTATTACAAGAGCAAGAACCAAGCGACGATGCATGAAGCCTACATGTTCCCGCTGCAGGTCACCAAACTACTGGAAAATTGGCCGGAGAAAGATTTCCGGAGGCGGGAATGGATGAGCGTGGAGAAAGCCAGAGAGGTTTGCCCTCAATGGATGAAAGAGGCTTTAGATTTATTGATTAGTCAACGAACAGAACTTGAGAGCTTGGATGAAGAAGGAACCCCCTGTTCATAA

Homology

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BLAST of CmoCh01G007760 vs. Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.7e-47
Identity = 105/203 (51.72%), Postives = 139/203 (68.47%), Query Frame = 1


Query: 1   MGLFFSR--NIAKFLLSSFF---SSQKFPSQIENVVSVVSARTGRHRQRYNQE-YRLVVG 60
           + LF S   N+A +L   F    S++  P+QIE VVS+VS RTGR  QRY+   YR VVG
Sbjct: 6   VSLFVSNLSNVASYLSPIFENIPSTKVVPAQIEKVVSLVS-RTGRDLQRYDHAGYRQVVG 65

Query: 61  CIPYRYK-DALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVV 120
           C+PYRYK   +       I+VL +S+QKG+ M+FPKGGWE DESME AALRET+EEAGV 
Sbjct: 66  CVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGGWETDESMEEAALRETIEEAGVT 125

Query: 121 GNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQ- 180
           G +E++LGKW YKSK  + +H+ YMF L V++  E WPE + R+R W+S+++AREVC   
Sbjct: 126 GELEEKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNW 185

Query: 181 WMKEALDLLISQRTELESLDEEG 196
           WM+EAL+  I+ +  L   DE G
Sbjct: 186 WMREALEAFINLKC-LADDDESG 206

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BLAST of CmoCh01G007760 vs. Swiss-Prot
Match: NUD18_ARATH (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.6e-45
Identity = 93/157 (59.24%), Postives = 116/157 (73.89%), Query Frame = 1


Query: 36  ARTGRHRQRYNQEYRLVVGCIPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWEND 95
           +RTGR  QRYN+  R VVGCIPYR K +      D  EVL ISSQKG A+MFPKGGWE D
Sbjct: 6   SRTGRQSQRYNKGRRQVVGCIPYRLKISSDGTISDEFEVLVISSQKGHALMFPKGGWELD 65

Query: 96  ESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDF 155
           ES+E AA RE+LEEAGVVGN+E++LGKW + SK++ T +E +MFP+ V + LE WPE+  
Sbjct: 66  ESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELELWPEQHL 125

Query: 156 RRREWMSVEKAREVCPQ-WMKEALDLLISQRTELESL 192
           R+R WM V++AR+ C   WMKEALD+L+ QR  L SL
Sbjct: 126 RQRIWMKVDEARDACRDWWMKEALDVLV-QRLSLLSL 161

[Close]

BLAST of CmoCh01G007760 vs. Swiss-Prot
Match: NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-44
Identity = 91/159 (57.23%), Postives = 117/159 (73.58%), Query Frame = 1


Query: 27  IENVVSVVSARTGRHRQRYNQEYRLVVGCIPYRYKDALKSFSVDNIEVLGISSQKGQAMM 86
           +E +V + S RTGR  QRYN+  R VVGC+PYR+K +      D +EVL ISSQKG A+M
Sbjct: 3   VEKMVCLAS-RTGRQFQRYNKGRRQVVGCVPYRFKLSNDGKISDEVEVLVISSQKGHALM 62

Query: 87  FPKGGWENDESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKL 146
           FPKGGWE DES+E AA RE LEEAGV+GN+E +LGKW + SK++ T +E  MFP+ VT+ 
Sbjct: 63  FPKGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQ 122

Query: 147 LENWPEKDFRRREWMSVEKAREVCPQ-WMKEALDLLISQ 185
           LE WPE+  R+R WM+V +ARE C   WMKEALD+L+ +
Sbjct: 123 LELWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVER 160

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BLAST of CmoCh01G007760 vs. Swiss-Prot
Match: NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.0e-42
Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 1


Query: 24  PSQIENVVSVVSARTGRHRQRYNQE-YRLVVGCIPYRYKDALKSFSVDNIEVLGISSQK- 83
           P+  E VVS+VS RTGR  QRYN   YR VVGC+PYRYK          IEVL IS+QK 
Sbjct: 35  PTPSEKVVSLVS-RTGRDLQRYNTAGYRQVVGCVPYRYK----KHGGGEIEVLLISAQKK 94

Query: 84  GQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPL 143
           G+ M+ PKGGWE DES+E AALRET+EEAGV G +E+ LGKW YKSK    +H+ +MFPL
Sbjct: 95  GKGMLLPKGGWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPL 154

Query: 144 QVTKLLENWPEKDFRRREWMSVEKAREVCP-QWMKEALDLLISQRTELE 190
            V++  E WPE +FR+R+W+S+ +A E+C   WM+EAL+  I+++ + +
Sbjct: 155 LVSQQFEIWPESEFRQRKWVSLSEAIELCQNSWMREALEAFINRKCQTQ 198

[Close]

BLAST of CmoCh01G007760 vs. Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31
Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 1


Query: 31  VSVVSARTGRHRQRYNQEYRLVVGCIPYRYKDALKSFS------VDNIEVLGISSQKGQA 90
           +SV+S+RTGR RQRY+  +RLV GCIPYR   A ++        V+ +EVL +SS     
Sbjct: 1   MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60

Query: 91  MMFPKGGWENDESMETAALRETLEEAGVVGNI-EKRLGKWYYKSKNQATMHE------AY 150
           ++FPKGGWE+DE++  AA RE +EEAGV G + E  LG W ++SK+     E       Y
Sbjct: 61  LVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSSTVEDECLGGCKGY 120

Query: 151 MFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QWMKEALD 180
           MF L+VT+ LE+WPE+  R R W++V++A E+C  +WM+ AL+
Sbjct: 121 MFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRALE 163

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BLAST of CmoCh01G007760 vs. TrEMBL
Match: I3SE70_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 120/193 (62.18%), Postives = 149/193 (77.20%), Query Frame = 1


Query: 1   MGLFFSRNIA-KFLLSSFFSSQK-----FPSQIENVVSVVSARTGRHRQRYNQEYRLVVG 60
           MGL  SRN+A KF    FFS++K     FP Q+ENV+S+VS RTGRH QRY++  RLVVG
Sbjct: 1   MGLLLSRNLAFKFFYPLFFSNKKVTKDLFPKQLENVISLVSPRTGRHLQRYDKGCRLVVG 60

Query: 61  CIPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVG 120
           CIPYRYK          IEVL IS+QKG  M FPKGGWE+DESME AALRET+EEAGVVG
Sbjct: 61  CIPYRYKR--NETQDKEIEVLVISAQKGHGMQFPKGGWESDESMEQAALRETIEEAGVVG 120

Query: 121 NIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QW 180
           ++E +LGKWYYKSK Q T+HE YMFPL V+K L+NWPE + RRR+W++V +A+E+CP  W
Sbjct: 121 SVESKLGKWYYKSKRQPTVHEGYMFPLLVSKELDNWPEMNTRRRKWITVAEAKEICPYAW 180

Query: 181 MKEALDLLISQRT 187
           MKEALD L+++++
Sbjct: 181 MKEALDELVNRQS 191

[Close]

BLAST of CmoCh01G007760 vs. TrEMBL
Match: A0A0B2SA65_GLYSO (Nudix hydrolase 4 OS=Glycine soja GN=glysoja_027712 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.2e-59
Identity = 119/196 (60.71%), Postives = 146/196 (74.49%), Query Frame = 1


Query: 1   MGLFFSRNIA-----KFLLSSFFSSQKFPSQIENVVSVVSARTGRHRQRYNQEYRLVVGC 60
           MGLF SRN+A      FL S+  S   FP Q+EN++S+VS RTGRH QRY++  R VVGC
Sbjct: 1   MGLFLSRNLACKFIYPFLFSNKVSKDLFPKQLENMMSLVSPRTGRHLQRYDKGCRQVVGC 60

Query: 61  IPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGN 120
           IPYRYK+         +EVL IS+QKG  M FPKGGWE DESME AALRET+EEAGVVG+
Sbjct: 61  IPYRYKN--NGTQDKELEVLVISAQKGHGMQFPKGGWETDESMEQAALRETIEEAGVVGS 120

Query: 121 IEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QWM 180
           +E +LGKWYYKSK Q  MHE YMFPL V K L+NWPE + R+R WM+V++A+E+CP  WM
Sbjct: 121 VEGKLGKWYYKSKRQPIMHEGYMFPLLVKKELDNWPEMNTRKRRWMTVDEAKEICPYAWM 180

Query: 181 KEALDLLISQRTELES 191
           KEALD L+ ++T+L S
Sbjct: 181 KEALDELVRRQTQLHS 194

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BLAST of CmoCh01G007760 vs. TrEMBL
Match: C6T3D6_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max GN=GLYMA_09G173400 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.2e-59
Identity = 119/196 (60.71%), Postives = 146/196 (74.49%), Query Frame = 1


Query: 1   MGLFFSRNIA-----KFLLSSFFSSQKFPSQIENVVSVVSARTGRHRQRYNQEYRLVVGC 60
           MGLF SRN+A      FL S+  S   FP Q+EN++S+VS RTGRH QRY++  R VVGC
Sbjct: 1   MGLFLSRNLACKFIYPFLFSNKVSKDLFPKQLENMMSLVSPRTGRHLQRYDKGCRQVVGC 60

Query: 61  IPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGN 120
           IPYRYK+         +EVL IS+QKG  M FPKGGWE DESME AALRET+EEAGVVG+
Sbjct: 61  IPYRYKN--NGTQDKELEVLVISAQKGHGMQFPKGGWETDESMEQAALRETIEEAGVVGS 120

Query: 121 IEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QWM 180
           +E +LGKWYYKSK Q  MHE YMFPL V K L+NWPE + R+R WM+V++A+E+CP  WM
Sbjct: 121 VEGKLGKWYYKSKRQPIMHEGYMFPLLVKKELDNWPEMNTRKRRWMTVDEAKEICPYAWM 180

Query: 181 KEALDLLISQRTELES 191
           KEALD L+ ++T+L S
Sbjct: 181 KEALDELVRRQTQLHS 194

[Close]

BLAST of CmoCh01G007760 vs. TrEMBL
Match: K7L547_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G055800 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.8e-58
Identity = 119/199 (59.80%), Postives = 147/199 (73.87%), Query Frame = 1


Query: 1   MGLFFSRNIA--KFLLSSFFSSQKFPSQIENVVSVVSARTGRHRQRYNQEYRLVVGCIPY 60
           MGLFFSRN+    FL S   S   FP Q++N++ +V ARTGRH QRY+   R VVGCIPY
Sbjct: 21  MGLFFSRNLPFNLFLFSKKASGDLFPEQLDNMMCLV-ARTGRHLQRYDDGCRQVVGCIPY 80

Query: 61  RYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEK 120
           RYK   K      +EVL IS+QKG  M FPKGGWE+DESME AALRET+EEAGVVGN+E 
Sbjct: 81  RYKR--KGSQNKELEVLVISAQKGNGMQFPKGGWESDESMEQAALRETIEEAGVVGNVES 140

Query: 121 RLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQ-WMKEA 180
           +LGKW+YKSK Q TMHE YMFPL V K LENWPEK+ R+R WM++++A++ CP  WMKEA
Sbjct: 141 KLGKWFYKSKRQDTMHEGYMFPLLVKKQLENWPEKNIRKRTWMTIDEAKQACPHPWMKEA 200

Query: 181 LDLLISQRTELESLDEEGT 197
           LD+L+S++ +  +L    T
Sbjct: 201 LDVLVSRQPQFWALQSHTT 216

[Close]

BLAST of CmoCh01G007760 vs. TrEMBL
Match: A0A0B2NSS5_GLYSO (Nudix hydrolase 4 OS=Glycine soja GN=glysoja_028663 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.8e-58
Identity = 119/199 (59.80%), Postives = 147/199 (73.87%), Query Frame = 1


Query: 1   MGLFFSRNIA--KFLLSSFFSSQKFPSQIENVVSVVSARTGRHRQRYNQEYRLVVGCIPY 60
           MGLFFSRN+    FL S   S   FP Q++N++ +V ARTGRH QRY+   R VVGCIPY
Sbjct: 1   MGLFFSRNLPFNLFLFSKKASGDLFPEQLDNMMCLV-ARTGRHLQRYDDGCRQVVGCIPY 60

Query: 61  RYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEK 120
           RYK   K      +EVL IS+QKG  M FPKGGWE+DESME AALRET+EEAGVVGN+E 
Sbjct: 61  RYKR--KGSQNKELEVLVISAQKGNGMQFPKGGWESDESMEQAALRETIEEAGVVGNVES 120

Query: 121 RLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQ-WMKEA 180
           +LGKW+YKSK Q TMHE YMFPL V K LENWPEK+ R+R WM++++A++ CP  WMKEA
Sbjct: 121 KLGKWFYKSKRQDTMHEGYMFPLLVKKQLENWPEKNIRKRTWMTIDEAKQACPHPWMKEA 180

Query: 181 LDLLISQRTELESLDEEGT 197
           LD+L+S++ +  +L    T
Sbjct: 181 LDVLVSRQPQFWALQSHTT 196

[Close]

BLAST of CmoCh01G007760 vs. TAIR10
Match: AT1G18300.1 (AT1G18300.1 nudix hydrolase homolog 4)

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-48
Identity = 105/203 (51.72%), Postives = 139/203 (68.47%), Query Frame = 1


Query: 1   MGLFFSR--NIAKFLLSSFF---SSQKFPSQIENVVSVVSARTGRHRQRYNQE-YRLVVG 60
           + LF S   N+A +L   F    S++  P+QIE VVS+VS RTGR  QRY+   YR VVG
Sbjct: 6   VSLFVSNLSNVASYLSPIFENIPSTKVVPAQIEKVVSLVS-RTGRDLQRYDHAGYRQVVG 65

Query: 61  CIPYRYK-DALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVV 120
           C+PYRYK   +       I+VL +S+QKG+ M+FPKGGWE DESME AALRET+EEAGV 
Sbjct: 66  CVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGGWETDESMEEAALRETIEEAGVT 125

Query: 121 GNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQ- 180
           G +E++LGKW YKSK  + +H+ YMF L V++  E WPE + R+R W+S+++AREVC   
Sbjct: 126 GELEEKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWPEAEMRQRRWVSLDEAREVCQNW 185

Query: 181 WMKEALDLLISQRTELESLDEEG 196
           WM+EAL+  I+ +  L   DE G
Sbjct: 186 WMREALEAFINLKC-LADDDESG 206

[Close]

BLAST of CmoCh01G007760 vs. TAIR10
Match: AT1G14860.1 (AT1G14860.1 nudix hydrolase homolog 18)

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-46
Identity = 93/157 (59.24%), Postives = 116/157 (73.89%), Query Frame = 1


Query: 36  ARTGRHRQRYNQEYRLVVGCIPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWEND 95
           +RTGR  QRYN+  R VVGCIPYR K +      D  EVL ISSQKG A+MFPKGGWE D
Sbjct: 6   SRTGRQSQRYNKGRRQVVGCIPYRLKISSDGTISDEFEVLVISSQKGHALMFPKGGWELD 65

Query: 96  ESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDF 155
           ES+E AA RE+LEEAGVVGN+E++LGKW + SK++ T +E +MFP+ V + LE WPE+  
Sbjct: 66  ESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELELWPEQHL 125

Query: 156 RRREWMSVEKAREVCPQ-WMKEALDLLISQRTELESL 192
           R+R WM V++AR+ C   WMKEALD+L+ QR  L SL
Sbjct: 126 RQRIWMKVDEARDACRDWWMKEALDVLV-QRLSLLSL 161

[Close]

BLAST of CmoCh01G007760 vs. TAIR10
Match: AT2G01670.1 (AT2G01670.1 nudix hydrolase homolog 17)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 91/159 (57.23%), Postives = 117/159 (73.58%), Query Frame = 1


Query: 27  IENVVSVVSARTGRHRQRYNQEYRLVVGCIPYRYKDALKSFSVDNIEVLGISSQKGQAMM 86
           +E +V + S RTGR  QRYN+  R VVGC+PYR+K +      D +EVL ISSQKG A+M
Sbjct: 3   VEKMVCLAS-RTGRQFQRYNKGRRQVVGCVPYRFKLSNDGKISDEVEVLVISSQKGHALM 62

Query: 87  FPKGGWENDESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPLQVTKL 146
           FPKGGWE DES+E AA RE LEEAGV+GN+E +LGKW + SK++ T +E  MFP+ VT+ 
Sbjct: 63  FPKGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQ 122

Query: 147 LENWPEKDFRRREWMSVEKAREVCPQ-WMKEALDLLISQ 185
           LE WPE+  R+R WM+V +ARE C   WMKEALD+L+ +
Sbjct: 123 LELWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVER 160

[Close]

BLAST of CmoCh01G007760 vs. TAIR10
Match: AT1G73540.1 (AT1G73540.1 nudix hydrolase homolog 21)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-43
Identity = 91/169 (53.85%), Postives = 120/169 (71.01%), Query Frame = 1


Query: 24  PSQIENVVSVVSARTGRHRQRYNQE-YRLVVGCIPYRYKDALKSFSVDNIEVLGISSQK- 83
           P+  E VVS+VS RTGR  QRYN   YR VVGC+PYRYK          IEVL IS+QK 
Sbjct: 35  PTPSEKVVSLVS-RTGRDLQRYNTAGYRQVVGCVPYRYK----KHGGGEIEVLLISAQKK 94

Query: 84  GQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEKRLGKWYYKSKNQATMHEAYMFPL 143
           G+ M+ PKGGWE DES+E AALRET+EEAGV G +E+ LGKW YKSK    +H+ +MFPL
Sbjct: 95  GKGMLLPKGGWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPL 154

Query: 144 QVTKLLENWPEKDFRRREWMSVEKAREVCP-QWMKEALDLLISQRTELE 190
            V++  E WPE +FR+R+W+S+ +A E+C   WM+EAL+  I+++ + +
Sbjct: 155 LVSQQFEIWPESEFRQRKWVSLSEAIELCQNSWMREALEAFINRKCQTQ 198

[Close]

BLAST of CmoCh01G007760 vs. TAIR10
Match: AT1G12880.1 (AT1G12880.1 nudix hydrolase homolog 12)

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 1


Query: 31  VSVVSARTGRHRQRYNQEYRLVVGCIPYRYKDALKSFS------VDNIEVLGISSQKGQA 90
           +SV+S+RTGR RQRY+  +RLV GCIPYR   A ++        V+ +EVL +SS     
Sbjct: 1   MSVLSSRTGRDRQRYDNNFRLVSGCIPYRLMKADETEEDSGVDFVNKLEVLMVSSPNRHD 60

Query: 91  MMFPKGGWENDESMETAALRETLEEAGVVGNI-EKRLGKWYYKSKNQATMHE------AY 150
           ++FPKGGWE+DE++  AA RE +EEAGV G + E  LG W ++SK+     E       Y
Sbjct: 61  LVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSSTVEDECLGGCKGY 120

Query: 151 MFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QWMKEALD 180
           MF L+VT+ LE+WPE+  R R W++V++A E+C  +WM+ AL+
Sbjct: 121 MFALKVTEELEDWPERKNRERRWLTVKEALELCRYEWMQRALE 163

[Close]

BLAST of CmoCh01G007760 vs. NCBI nr
Match: gi|1012175700|ref|XP_015966876.1| (PREDICTED: nudix hydrolase 18, mitochondrial-like [Arachis duranensis])

HSP 1 Score: 241.9 bits (616), Expect = 9.6e-61
Identity = 123/195 (63.08%), Postives = 149/195 (76.41%), Query Frame = 1


Query: 1   MGLFFSRNIA-KFLLSSFFSSQK-----FPSQIENVVSVVSARTGRHRQRYNQEYRLVVG 60
           MGL  SRN+A KFL S  FS++K     FP Q+ENV+S+VS RTGRH QRY +  RLVVG
Sbjct: 20  MGLLLSRNLACKFLYSFLFSAKKASPDLFPKQLENVMSLVSPRTGRHLQRYEKGCRLVVG 79

Query: 61  CIPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVG 120
           CIPYRYK+         IEVL IS+QKG+ M FPKGGWE DESME AALRET+EEAGV G
Sbjct: 80  CIPYRYKN--NGTQDKEIEVLVISAQKGKGMQFPKGGWETDESMEQAALRETIEEAGVFG 139

Query: 121 NIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QW 180
           NIE  LGKW YKSK Q T+HE YMFP+ V+K L+NWPE +FR+R WM+V +A+E+CP  W
Sbjct: 140 NIESELGKWTYKSKRQPTIHEGYMFPMLVSKQLDNWPEMNFRKRRWMTVAEAKEICPYDW 199

Query: 181 MKEALDLLISQRTEL 189
           MKEALD+L+ ++T+L
Sbjct: 200 MKEALDILVQRQTQL 212

[Close]

BLAST of CmoCh01G007760 vs. NCBI nr
Match: gi|388500992|gb|AFK38562.1| (unknown [Lotus japonicus])

HSP 1 Score: 236.1 bits (601), Expect = 5.2e-59
Identity = 120/193 (62.18%), Postives = 149/193 (77.20%), Query Frame = 1


Query: 1   MGLFFSRNIA-KFLLSSFFSSQK-----FPSQIENVVSVVSARTGRHRQRYNQEYRLVVG 60
           MGL  SRN+A KF    FFS++K     FP Q+ENV+S+VS RTGRH QRY++  RLVVG
Sbjct: 1   MGLLLSRNLAFKFFYPLFFSNKKVTKDLFPKQLENVISLVSPRTGRHLQRYDKGCRLVVG 60

Query: 61  CIPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVG 120
           CIPYRYK          IEVL IS+QKG  M FPKGGWE+DESME AALRET+EEAGVVG
Sbjct: 61  CIPYRYKR--NETQDKEIEVLVISAQKGHGMQFPKGGWESDESMEQAALRETIEEAGVVG 120

Query: 121 NIEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QW 180
           ++E +LGKWYYKSK Q T+HE YMFPL V+K L+NWPE + RRR+W++V +A+E+CP  W
Sbjct: 121 SVESKLGKWYYKSKRQPTVHEGYMFPLLVSKELDNWPEMNTRRRKWITVAEAKEICPYAW 180

Query: 181 MKEALDLLISQRT 187
           MKEALD L+++++
Sbjct: 181 MKEALDELVNRQS 191

[Close]

BLAST of CmoCh01G007760 vs. NCBI nr
Match: gi|356531134|ref|XP_003534133.1| (PREDICTED: nudix hydrolase 18, mitochondrial [Glycine max])

HSP 1 Score: 235.3 bits (599), Expect = 8.9e-59
Identity = 119/196 (60.71%), Postives = 146/196 (74.49%), Query Frame = 1


Query: 1   MGLFFSRNIA-----KFLLSSFFSSQKFPSQIENVVSVVSARTGRHRQRYNQEYRLVVGC 60
           MGLF SRN+A      FL S+  S   FP Q+EN++S+VS RTGRH QRY++  R VVGC
Sbjct: 1   MGLFLSRNLACKFIYPFLFSNKVSKDLFPKQLENMMSLVSPRTGRHLQRYDKGCRQVVGC 60

Query: 61  IPYRYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGN 120
           IPYRYK+         +EVL IS+QKG  M FPKGGWE DESME AALRET+EEAGVVG+
Sbjct: 61  IPYRYKN--NGTQDKELEVLVISAQKGHGMQFPKGGWETDESMEQAALRETIEEAGVVGS 120

Query: 121 IEKRLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCP-QWM 180
           +E +LGKWYYKSK Q  MHE YMFPL V K L+NWPE + R+R WM+V++A+E+CP  WM
Sbjct: 121 VEGKLGKWYYKSKRQPIMHEGYMFPLLVKKELDNWPEMNTRKRRWMTVDEAKEICPYAWM 180

Query: 181 KEALDLLISQRTELES 191
           KEALD L+ ++T+L S
Sbjct: 181 KEALDELVRRQTQLHS 194

[Close]

BLAST of CmoCh01G007760 vs. NCBI nr
Match: gi|955333431|ref|XP_003532546.2| (PREDICTED: nudix hydrolase 18, mitochondrial-like [Glycine max])

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-58
Identity = 119/199 (59.80%), Postives = 147/199 (73.87%), Query Frame = 1


Query: 1   MGLFFSRNIA--KFLLSSFFSSQKFPSQIENVVSVVSARTGRHRQRYNQEYRLVVGCIPY 60
           MGLFFSRN+    FL S   S   FP Q++N++ +V ARTGRH QRY+   R VVGCIPY
Sbjct: 21  MGLFFSRNLPFNLFLFSKKASGDLFPEQLDNMMCLV-ARTGRHLQRYDDGCRQVVGCIPY 80

Query: 61  RYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEK 120
           RYK   K      +EVL IS+QKG  M FPKGGWE+DESME AALRET+EEAGVVGN+E 
Sbjct: 81  RYKR--KGSQNKELEVLVISAQKGNGMQFPKGGWESDESMEQAALRETIEEAGVVGNVES 140

Query: 121 RLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQ-WMKEA 180
           +LGKW+YKSK Q TMHE YMFPL V K LENWPEK+ R+R WM++++A++ CP  WMKEA
Sbjct: 141 KLGKWFYKSKRQDTMHEGYMFPLLVKKQLENWPEKNIRKRTWMTIDEAKQACPHPWMKEA 200

Query: 181 LDLLISQRTELESLDEEGT 197
           LD+L+S++ +  +L    T
Sbjct: 201 LDVLVSRQPQFWALQSHTT 216

[Close]

BLAST of CmoCh01G007760 vs. NCBI nr
Match: gi|734311718|gb|KHN00135.1| (Nudix hydrolase 4 [Glycine soja])

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-58
Identity = 119/199 (59.80%), Postives = 147/199 (73.87%), Query Frame = 1


Query: 1   MGLFFSRNIA--KFLLSSFFSSQKFPSQIENVVSVVSARTGRHRQRYNQEYRLVVGCIPY 60
           MGLFFSRN+    FL S   S   FP Q++N++ +V ARTGRH QRY+   R VVGCIPY
Sbjct: 1   MGLFFSRNLPFNLFLFSKKASGDLFPEQLDNMMCLV-ARTGRHLQRYDDGCRQVVGCIPY 60

Query: 61  RYKDALKSFSVDNIEVLGISSQKGQAMMFPKGGWENDESMETAALRETLEEAGVVGNIEK 120
           RYK   K      +EVL IS+QKG  M FPKGGWE+DESME AALRET+EEAGVVGN+E 
Sbjct: 61  RYKR--KGSQNKELEVLVISAQKGNGMQFPKGGWESDESMEQAALRETIEEAGVVGNVES 120

Query: 121 RLGKWYYKSKNQATMHEAYMFPLQVTKLLENWPEKDFRRREWMSVEKAREVCPQ-WMKEA 180
           +LGKW+YKSK Q TMHE YMFPL V K LENWPEK+ R+R WM++++A++ CP  WMKEA
Sbjct: 121 KLGKWFYKSKRQDTMHEGYMFPLLVKKQLENWPEKNIRKRTWMTIDEAKQACPHPWMKEA 180

Query: 181 LDLLISQRTELESLDEEGT 197
           LD+L+S++ +  +L    T
Sbjct: 181 LDVLVSRQPQFWALQSHTT 196

The following BLAST results are available for this feature:

BLAST of CmoCh01G007760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NUDT4_ARATH	2.7e-47	51.72	Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1	[more]
NUD18_ARATH	5.6e-45	59.24	Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1	[more]
NUD17_ARATH	2.1e-44	57.23	Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1	[more]
NUD21_ARATH	2.0e-42	53.85	Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1	[more]
NUD12_ARATH	2.1e-31	46.01	Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1	[more]

BLAST of CmoCh01G007760 vs. TrEMBL


Match Name	E-value	Identity	Description
I3SE70_LOTJA	3.7e-59	62.18	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A0B2SA65_GLYSO	6.2e-59	60.71	Nudix hydrolase 4 OS=Glycine soja GN=glysoja_027712 PE=4 SV=1	[more]
C6T3D6_SOYBN	6.2e-59	60.71	Uncharacterized protein (Fragment) OS=Glycine max GN=GLYMA_09G173400 PE=2 SV=1	[more]
K7L547_SOYBN	1.8e-58	59.80	Uncharacterized protein OS=Glycine max GN=GLYMA_08G055800 PE=4 SV=1	[more]
A0A0B2NSS5_GLYSO	1.8e-58	59.80	Nudix hydrolase 4 OS=Glycine soja GN=glysoja_028663 PE=4 SV=1	[more]

BLAST of CmoCh01G007760 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18300.1	1.5e-48	51.72	nudix hydrolase homolog 4	[more]
AT1G14860.1	3.2e-46	59.24	nudix hydrolase homolog 18	[more]
AT2G01670.1	1.2e-45	57.23	nudix hydrolase homolog 17	[more]
AT1G73540.1	1.1e-43	53.85	nudix hydrolase homolog 21	[more]
AT1G12880.1	1.2e-32	46.01	nudix hydrolase homolog 12	[more]

BLAST of CmoCh01G007760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1012175700\|ref\|XP_015966876.1\|	9.6e-61	63.08	PREDICTED: nudix hydrolase 18, mitochondrial-like [Arachis duranensis]	[more]
gi\|388500992\|gb\|AFK38562.1\|	5.2e-59	62.18	unknown [Lotus japonicus]	[more]
gi\|356531134\|ref\|XP_003534133.1\|	8.9e-59	60.71	PREDICTED: nudix hydrolase 18, mitochondrial [Glycine max]	[more]
gi\|955333431\|ref\|XP_003532546.2\|	2.6e-58	59.80	PREDICTED: nudix hydrolase 18, mitochondrial-like [Glycine max]	[more]
gi\|734311718\|gb\|KHN00135.1\|	2.6e-58	59.80	Nudix hydrolase 4 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000086	NUDIX_hydrolase_dom
IPR015797	NUDIX_hydrolase-like_dom_sf
IPR020084	NUDIX_hydrolase_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0052841	inositol bisdiphosphate tetrakisphosphate diphosphatase activity
molecular_function	GO:0052842	inositol diphosphate pentakisphosphate diphosphatase activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G007760.1	CmoCh01G007760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 83..178 score: 3.1
IPR000086	NUDIX hydrolase domain	PROFILE	PS51462	NUDIX	coord: 48..182 score: 12
IPR015797	NUDIX hydrolase domain-like	GENE3D	G3DSA:3.90.79.10		coord: 40..184 score: 2.7
IPR015797	NUDIX hydrolase domain-like	unknown	SSF55811	Nudix	coord: 39..183 score: 1.35
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 90..111 scor
None	No IPR available	unknown	Coil	Coil	coord: 174..194 scor
None	No IPR available	PANTHER	PTHR12629	DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE	coord: 1..187 score: 6.2
None	No IPR available	PANTHER	PTHR12629:SF15	NUDIX HYDROLASE 21, CHLOROPLASTIC-RELATED	coord: 1..187 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G007760	CmaCh01G007420	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G007760	Cp4.1LG02g09830	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G007760	Carg07002	Silver-seed gourd	carcmoB0708

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G007760	Cucumber (Gy14) v1	cgycmoB0267
CmoCh01G007760	Wild cucumber (PI 183967)	cmocpiB421
CmoCh01G007760	Cucumber (Chinese Long) v2	cmocuB417
CmoCh01G007760	Cucurbita pepo (Zucchini)	cmocpeB417
CmoCh01G007760	Cucumber (Gy14) v2	cgybcmoB099
CmoCh01G007760	Cucumber (Chinese Long) v3	cmocucB0501