Cp4.1LG02g05620 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g05620
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionER membrane protein complex subunit-like protein
LocationCp4.1LG02 : 1660168 .. 1663231 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATTAGAGAAAAGTAGAGCACAAGGATCTGAATCTTAAACTACCGAAGCGACTAAGCGAGTTTAACTTCAACTCCACCATCGAAAAATCCGAAAATTGTATTCTGAATGGAGAAGGGTAAAGGTTTGATGGTTGACGGTCGGCGATGGGCCGTCGATTTCACCGACAATTCGTCGTCGAATTCGACTCGCGATATTCCCGATCCTCCCGGTTTCAACCGTGCTTCTCAAGATCAGGACGATTCGACTCTCAGCCGTCAGAAGAAGGACGCCGAATCCAATTGGAAGGCACAGGTGTTACTCGAAATTCTATTATTTTGGTCGATTAGGGTTTTTGTTTTCTGGTTTTTGTCTATTCGATTGTGTTTTGTGATTGTTCGTGCTTAATTTTTCGGTATCTCGCTGAGCGGTAGTTCTTAGGCGGGATTAGCGAGTTTTGAAGCGAGAAACTATCGATTACCTTTTTAGAGGATTTCGGTGGGCGAGATTGCATATTAGTGGAAACCTTGTGCTTTTTGTTTGATTGCTTAATGACGGAATTTCGAGAGTTGAATGCAATCTCTTACCTTCTTAAGCATTTCCGATGGAAAATTCTTTGTCGAATCTGTAAGCCGTTTAGCTGTTGGAGAAAATTCAAACAACTCTCCAAGGTGAAAATCACACATGTTGTTTTACAAAAGAAAAAAGTTCGTAAGATGAAGGTCTTGAAATTTGGTTCGAACTATATAAACTCTATTTTAACCACTAATCGTTTTTATTTTCTTGTGAAGAATTTCTGTCCATGTTGTGAATCGTTTTTTTAGTTCCAAGTGTTTATTAACAAAGACTCTGGTTCTGAATCTTTGTTCCATGATGTTTAATCTGCGTCTTTGTTCTCATGCTGTTTCTTTACCATCAAGAATTTGATTATCAAATGAAGTACCAACCTTACAATATATGAACAGAAAGCTTGGGAAGTGGCACAGGCGCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTATGGCAGCCCATAAGTGCCCTGCAAGGCGTTGGAAAGGGTAGGATTAATATCCTTTTTTTTTTTCCAACTTTACTTCATGTTTGTTAGTGCTAAGCTGGCTTTTAAGAGATCTTCCAACGACCCGAGTCTCCTTATTAGTGTATTCTACATAAAGAGGCATTTTTAGGAGAATAATCATGTTTCTTGTTTCATTTTTTTTTGGTGGTTTGGGCCTTCTAAGTTCTTTGTTCTTGATCAAGTTTCTTTTATCAGCAGATTCGGAAAAATGTTAAGCTTAATTCTTACTGTTATGTTTGTAGAATCGCTATATAAGATACATATTTGTGAACTAGGAAAAATAATAGAATTTACCGATGTTGACGATTTGATTCTAGTAGGTTTAGCTTATTGTTGCCTGTTACTATTGATATATCTTCTCGCTGCAGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTGTTTATTGCCCTTAACCTTGGAGGATTAGCATTAGGTGTTTGGAAGGTGAGTTTTCTAATTATTATTGTTATTATTGTTCTTTTTATGTTTTTATCACTTAATCCCTAATATGTTCTTAGCATCTCTCTAGCATTTGGTGATCACTGCTTAATTTTCCCGTATTTCGAATGTGGCTTTTGCAGCTTAACACATTGGGGCTTTTGCCAACTCATATATCAGACTGGGTTTCATCTCTGCCACCTGCTCAGGTCAGAATTTACTCGTGTCCTAATATGATTTACGTCCTTTTCTCAGGCACGTGCTGTGCTTGTGCATGTCACCTGAACTTCTCAAAGCTTTCAGAAATGATATATGGAATTTGTTATATTTATCTTGTTGGGCTTCATGTTTCAGTAATGCTTGGTTCCAAATCTTGTGCTTAACTAGTAGTCAAATGGGAGAGTTCTCTGGATTCAGTCATCTTGAAGTCGATGACTTCAAATCTTGATGATCTTCTATTAATAGTATTAATACTCTATTAGTTACTCGAATCTAAATGCTATCGGATTCGTTTTTGTGTAGTGCGAAATTAGGTAAGGTAGAAATGCTTGGACATCGACGAAAGTATGGGGAAAAAATCCCCATGCTTTTGTTTCTCTTAGGATGCAAGTTCTGCTAATAATCAAGAAGCAATATTCGTCAATTGGTTTGGTTGATAGGATTTCTAGGCCATCTATTTTGTATACTTTGTCTAGGAGAGTTTAAAGGGATTTTAATGTGGACGAGTTGTGATTAGTAATGATTGGCAGTGGAAAGGTAAGGTTAGCAGTAGTAAGCTAGATTGCGTACCGTTATTTAGTTAGGTTCGATGGGAGAAAATAGGAGAAGGGAAAAGCCAACGTGAGCATAACTTAACCGGTTTAGGCATTAGCATTTCTTGATCAAATCCCTTGCTGGCAAAGGCTTCAAACTAAGGTATGAGAACATGGACAAGGGTGTTTATCTCCTCGGCGAACTTCTCGAGCCTCATAAATGGTCGTCCTCGTGGTAAAAGTTTTGCATCTCGGGGACTTAGACGAGGGGAAGAAAAGGGAAAAAAAAGAAAGAAAAAAGAACCTTTCGGACTTGAAAGGTAGCACAGATTTTTATGAGTGCCAGCATCTTGGAACATAATCTCTATGATATTAGTTCTTCAATCCATTGTAGCATTGCTAAAGAATTCACGGTCTTCCTTTTCAGGAGGTCGAATTTTCGGGTGGTGGCTTTCCTCTTCGTTAAGATGCACACGACTTCCTGTGAAACTAACAGAGGAAAACATGGATCTGCCTGTTGACGATCGAATTTCGCAAGCAGATTGCTCGTGTTGTGCATTAACATGATGATATCTCTTTGTATTACGCCTGCATGGATTATAGATTGTGTTTGATCAAGAACAATGTTACAGATGTGCTGCTGAAGGCACAGCTATTATTTTTATGGTACACACTCATGTTATGTTTTTTTTCCCCCAGCTAGTTTCTGGTAGCAGAATATATTTTTGATTTTTT

mRNA sequence

TAATTAGAGAAAAGTAGAGCACAAGGATCTGAATCTTAAACTACCGAAGCGACTAAGCGAGTTTAACTTCAACTCCACCATCGAAAAATCCGAAAATTGTATTCTGAATGGAGAAGGGTAAAGGTTTGATGGTTGACGGTCGGCGATGGGCCGTCGATTTCACCGACAATTCGTCGTCGAATTCGACTCGCGATATTCCCGATCCTCCCGGTTTCAACCGTGCTTCTCAAGATCAGGACGATTCGACTCTCAGCCGTCAGAAGAAGGACGCCGAATCCAATTGGAAGGCACAGAAAGCTTGGGAAGTGGCACAGGCGCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTATGGCAGCCCATAAGTGCCCTGCAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTGTTTATTGCCCTTAACCTTGGAGGATTAGCATTAGGTGTTTGGAAGCTTAACACATTGGGGCTTTTGCCAACTCATATATCAGACTGGGTTTCATCTCTGCCACCTGCTCAGGAGGTCGAATTTTCGGGTGGTGGCTTTCCTCTTCGTTAAGATGCACACGACTTCCTGTGAAACTAACAGAGGAAAACATGGATCTGCCTGTTGACGATCGAATTTCGCAAGCAGATTGCTCGTGTTGTGCATTAACATGATGATATCTCTTTGTATTACGCCTGCATGGATTATAGATTGTGTTTGATCAAGAACAATGTTACAGATGTGCTGCTGAAGGCACAGCTATTATTTTTATGGTACACACTCATGTTATGTTTTTTTTCCCCCAGCTAGTTTCTGGTAGCAGAATATATTTTTGATTTTTT

Coding sequence (CDS)

ATGGAGAAGGGTAAAGGTTTGATGGTTGACGGTCGGCGATGGGCCGTCGATTTCACCGACAATTCGTCGTCGAATTCGACTCGCGATATTCCCGATCCTCCCGGTTTCAACCGTGCTTCTCAAGATCAGGACGATTCGACTCTCAGCCGTCAGAAGAAGGACGCCGAATCCAATTGGAAGGCACAGAAAGCTTGGGAAGTGGCACAGGCGCCTTTGAAGAATTTGTTCATGATGGGCTTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATTGGTATCACATTTTCAGCTCTATGGCAGCCCATAAGTGCCCTGCAAGGCGTTGGAAAGGTTTTTGAGCCTTACAAGGACAGTAAAGTAGATCTTCTTGGACCTAAGTTGCTGTTTATTGCCCTTAACCTTGGAGGATTAGCATTAGGTGTTTGGAAGCTTAACACATTGGGGCTTTTGCCAACTCATATATCAGACTGGGTTTCATCTCTGCCACCTGCTCAGGAGGTCGAATTTTCGGGTGGTGGCTTTCCTCTTCGTTAA

Protein sequence

MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWKAQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR
Homology
[Close]
BLAST of Cp4.1LG02g05620 vs. Swiss-Prot
Match: EMC4_BOVIN (ER membrane protein complex subunit 4 OS=Bos taurus GN=EMC4 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-19
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 1 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG  L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of Cp4.1LG02g05620 vs. Swiss-Prot
Match: EMC4_HUMAN (ER membrane protein complex subunit 4 OS=Homo sapiens GN=EMC4 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-19
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 1 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG  L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of Cp4.1LG02g05620 vs. Swiss-Prot
Match: EMC4_MOUSE (ER membrane protein complex subunit 4 OS=Mus musculus GN=Emc4 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-19
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 1 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG  L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of Cp4.1LG02g05620 vs. Swiss-Prot
Match: EMC4_PONAB (ER membrane protein complex subunit 4 OS=Pongo abelii GN=EMC4 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-19
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 1 

Query: 62  QKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDS 121
           ++ W++A  PLK + M  F+M+MAG+T+ +F   +     W+PI AL  +   F+  + S
Sbjct: 67  KRCWDIALGPLKQIPMNLFIMYMAGNTISIFPTMMVCMMAWRPIQALMAISATFKMLESS 126

Query: 122 KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
               L   L+++  NL GLAL V+K  ++GLLPTH SDW++ + P + +EFSGGG  L
Sbjct: 127 SQKFL-QGLVYLIGNLMGLALAVYKCQSMGLLPTHASDWLAFIEPPERMEFSGGGLLL 183

[Close]
BLAST of Cp4.1LG02g05620 vs. Swiss-Prot
Match: EMC4_XENLA (ER membrane protein complex subunit 4 OS=Xenopus laevis GN=emc4 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.2e-19
Identity = 59/176 (33.52%), Postives = 95/176 (53.98%), Query Frame = 1 

Query: 11  GRR--WAVDFTDNSSSN-----STRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWKAQK 70
           GRR  WA++F    S         +D   P G++      D        ++++     ++
Sbjct: 12  GRRFKWAIEFGSGGSRGRGERGGLQDSMYPVGYS------DKQVPDTSVQESDHILVEKR 71

Query: 71  AWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKDSKV 130
            W++A  PLK + M  F+M+MAG+T+ +F I +     W+PI AL      F+  + S  
Sbjct: 72  CWDIALGPLKQIPMNLFIMYMAGNTISIFPIMMVCMMAWRPIQALLATPATFKLLESSGQ 131

Query: 131 DLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
             L   L+++  NL GLALGV+K  ++GLLPTH SDW++ + P + +E++GGGF L
Sbjct: 132 RFL-QGLVYLIGNLLGLALGVYKCQSMGLLPTHASDWLAFIEPPERMEYTGGGFLL 180

[Close]
BLAST of Cp4.1LG02g05620 vs. TrEMBL
Match: A0A0A0L0B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G651820 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 6.4e-95
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of Cp4.1LG02g05620 vs. TrEMBL
Match: V4UH15_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009603mg PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-88
Identity = 163/180 (90.56%), Postives = 171/180 (95.00%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKG+M  GRRWAVDFTDNS++ STRDI DPPGF+RASQDQDDSTLSRQKKDAE+NWK
Sbjct: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAP KNL MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH SDWVSSLPPA EVE+SGGG PL+
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ 180

[Close]
BLAST of Cp4.1LG02g05620 vs. TrEMBL
Match: A0A067FJ52_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030270mg PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.2e-88
Identity = 163/180 (90.56%), Postives = 171/180 (95.00%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKG+M  GRRWAVDFTDNS++ STRDI DPPGF+RASQDQDDSTLSRQKKDAE+NWK
Sbjct: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAP KNL MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH SDWVSSLPPA EVE+SGGG PL+
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ 180

[Close]
BLAST of Cp4.1LG02g05620 vs. TrEMBL
Match: A0A0D2UHA8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G064600 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.4e-88
Identity = 161/179 (89.94%), Postives = 170/179 (94.97%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKG+M  GRRWAVDF+DNS++ S+RDIPDPPGF RAS DQDDST+SRQKKDAESNWK
Sbjct: 1   MEKGKGIMGSGRRWAVDFSDNSTAPSSRDIPDPPGFTRASVDQDDSTVSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAP KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
           +KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH SDWVSSLPPAQEVE+SGGG PL
Sbjct: 121 NKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYSGGGIPL 179

[Close]
BLAST of Cp4.1LG02g05620 vs. TrEMBL
Match: A0A0B0PF12_GOSAR (Transmembrane 85 OS=Gossypium arboreum GN=F383_00931 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-87
Identity = 160/179 (89.39%), Postives = 169/179 (94.41%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKG+M  GRRWAVDF+DNS++ S+RDIPDPPGF RAS DQDDST+SRQKKDAESNWK
Sbjct: 1   MEKGKGIMGSGRRWAVDFSDNSTAPSSRDIPDPPGFARASVDQDDSTVSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAP KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
           +KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLP H SDWVSSLPPAQEVE+SGGG PL
Sbjct: 121 NKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPIHASDWVSSLPPAQEVEYSGGGIPL 179

[Close]
BLAST of Cp4.1LG02g05620 vs. TAIR10
Match: AT5G10780.2 (AT5G10780.2 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 277.7 bits (709), Expect = 5.0e-75
Identity = 134/168 (79.76%), Postives = 151/168 (89.88%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           M+KGK +M  GRRWAV+F+D S+  S+RDI DPPGF+RASQ+QDDS  SRQKKDAE+ WK
Sbjct: 1   MDKGKAVMGTGRRWAVEFSDQSTVPSSRDILDPPGFSRASQEQDDSANSRQKKDAEATWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
            QKAWEVAQ+P KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQ VGK+FEP+KD
Sbjct: 61  LQKAWEVAQSPFKNLMMMGFMMWMAGNTVHLFSIGITFSALWQPISALQSVGKIFEPFKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQ 169
           +KV+LL PKL+F+ALNLGGLALGVWKLNTLGLLPTH SDWVSSLPP Q
Sbjct: 121 NKVELLMPKLVFLALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPPQ 168

[Close]
BLAST of Cp4.1LG02g05620 vs. NCBI nr
Match: gi|659104151|ref|XP_008452824.1| (PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 2.4e-95
Identity = 175/180 (97.22%), Postives = 177/180 (98.33%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVDGRRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDGRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH+SDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHVSDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of Cp4.1LG02g05620 vs. NCBI nr
Match: gi|449455501|ref|XP_004145491.1| (PREDICTED: ER membrane protein complex subunit 4 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 9.2e-95
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKGLMVD RRWAVDF+DNSSSNSTRDIPDPPGF RASQDQDDSTLSRQKKDAESNWK
Sbjct: 1   MEKGKGLMVDSRRWAVDFSDNSSSNSTRDIPDPPGFTRASQDQDDSTLSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGG  LR
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGISLR 180

[Close]
BLAST of Cp4.1LG02g05620 vs. NCBI nr
Match: gi|567916498|ref|XP_006450255.1| (hypothetical protein CICLE_v10009603mg [Citrus clementina])

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88
Identity = 163/180 (90.56%), Postives = 171/180 (95.00%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKG+M  GRRWAVDFTDNS++ STRDI DPPGF+RASQDQDDSTLSRQKKDAE+NWK
Sbjct: 1   MEKGKGVMGSGRRWAVDFTDNSTTPSTRDIADPPGFSRASQDQDDSTLSRQKKDAEANWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           +QKAWEVAQAP KNL MMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  SQKAWEVAQAPFKNLMMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPLR 180
           SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH SDWVSSLPPA EVE+SGGG PL+
Sbjct: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPALEVEYSGGGIPLQ 180

[Close]
BLAST of Cp4.1LG02g05620 vs. NCBI nr
Match: gi|823225682|ref|XP_012445649.1| (PREDICTED: ER membrane protein complex subunit 4-like [Gossypium raimondii])

HSP 1 Score: 332.4 bits (851), Expect = 4.9e-88
Identity = 161/179 (89.94%), Postives = 170/179 (94.97%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKG+M  GRRWAVDF+DNS++ S+RDIPDPPGF RAS DQDDST+SRQKKDAESNWK
Sbjct: 1   MEKGKGIMGSGRRWAVDFSDNSTAPSSRDIPDPPGFTRASVDQDDSTVSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAP KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
           +KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTH SDWVSSLPPAQEVE+SGGG PL
Sbjct: 121 NKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHASDWVSSLPPAQEVEYSGGGIPL 179

[Close]
BLAST of Cp4.1LG02g05620 vs. NCBI nr
Match: gi|728845585|gb|KHG25028.1| (Transmembrane 85 [Gossypium arboreum])

HSP 1 Score: 329.3 bits (843), Expect = 4.1e-87
Identity = 160/179 (89.39%), Postives = 169/179 (94.41%), Query Frame = 1 

Query: 1   MEKGKGLMVDGRRWAVDFTDNSSSNSTRDIPDPPGFNRASQDQDDSTLSRQKKDAESNWK 60
           MEKGKG+M  GRRWAVDF+DNS++ S+RDIPDPPGF RAS DQDDST+SRQKKDAESNWK
Sbjct: 1   MEKGKGIMGSGRRWAVDFSDNSTAPSSRDIPDPPGFARASVDQDDSTVSRQKKDAESNWK 60

Query: 61  AQKAWEVAQAPLKNLFMMGFMMWMAGSTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120
           AQKAWEVAQAP KNL MMGFMMWMAG+TVHLFSIGITFSALWQPISALQGVGKVFEPYKD
Sbjct: 61  AQKAWEVAQAPFKNLLMMGFMMWMAGNTVHLFSIGITFSALWQPISALQGVGKVFEPYKD 120

Query: 121 SKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPTHISDWVSSLPPAQEVEFSGGGFPL 180
           +KVDLLGPKLLFIALNLGGLALGVWKLNTLGLLP H SDWVSSLPPAQEVE+SGGG PL
Sbjct: 121 NKVDLLGPKLLFIALNLGGLALGVWKLNTLGLLPIHASDWVSSLPPAQEVEYSGGGIPL 179

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g05620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EMC4_BOVIN2.8e-1939.83ER membrane protein complex subunit 4 OS=Bos taurus GN=EMC4 PE=2 SV=1[more]
EMC4_HUMAN2.8e-1939.83ER membrane protein complex subunit 4 OS=Homo sapiens GN=EMC4 PE=1 SV=2[more]
EMC4_MOUSE2.8e-1939.83ER membrane protein complex subunit 4 OS=Mus musculus GN=Emc4 PE=1 SV=1[more]
EMC4_PONAB2.8e-1939.83ER membrane protein complex subunit 4 OS=Pongo abelii GN=EMC4 PE=2 SV=1[more]
EMC4_XENLA8.2e-1933.52ER membrane protein complex subunit 4 OS=Xenopus laevis GN=emc4 PE=2 SV=1[more]
BLAST of Cp4.1LG02g05620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0B6_CUCSA6.4e-9597.22Uncharacterized protein OS=Cucumis sativus GN=Csa_4G651820 PE=4 SV=1[more]
V4UH15_9ROSI1.2e-8890.56Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009603mg PE=4 SV=1[more]
A0A067FJ52_CITSI1.2e-8890.56Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030270mg PE=4 SV=1[more]
A0A0D2UHA8_GOSRA3.4e-8889.94Uncharacterized protein OS=Gossypium raimondii GN=B456_009G064600 PE=4 SV=1[more]
A0A0B0PF12_GOSAR2.9e-8789.39Transmembrane 85 OS=Gossypium arboreum GN=F383_00931 PE=4 SV=1[more]
BLAST of Cp4.1LG02g05620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G10780.25.0e-7579.76 FUNCTIONS IN: molecular_function unknown[more]
BLAST of Cp4.1LG02g05620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659104151|ref|XP_008452824.1|2.4e-9597.22PREDICTED: ER membrane protein complex subunit 4 [Cucumis melo][more]
gi|449455501|ref|XP_004145491.1|9.2e-9597.22PREDICTED: ER membrane protein complex subunit 4 [Cucumis sativus][more]
gi|567916498|ref|XP_006450255.1|1.7e-8890.56hypothetical protein CICLE_v10009603mg [Citrus clementina][more]
gi|823225682|ref|XP_012445649.1|4.9e-8889.94PREDICTED: ER membrane protein complex subunit 4-like [Gossypium raimondii][more]
gi|728845585|gb|KHG25028.1|4.1e-8789.39Transmembrane 85 [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009445TMEM85/Emc4
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003950 NAD+ ADP-ribosyltransferase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g05620.1Cp4.1LG02g05620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009445Protein of unknown function DUF1077, TMEM85PIRPIRSF017207UCP017207_Tmem85coord: 1..177
score: 5.7
IPR009445Protein of unknown function DUF1077, TMEM85PANTHERPTHR19315FAMILY NOT NAMEDcoord: 2..179
score: 1.1
IPR009445Protein of unknown function DUF1077, TMEM85PFAMPF06417DUF1077coord: 52..164
score: 5.4