Cp4.1LG01g26100 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g26100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	E3 ubiquitin-protein ligase
Location	Cp4.1LG01 : 21138271 .. 21142477 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCATTATCAGACTTTTTTTCCGCATTGTTTCCGATTTGTGGTCGGAGCAGGCACATTCATTCTCGAGGGTGTATCTCTCAGCGAATCAAAGGAACGCAGATTTTCCTTCTGAGAGATGGAAGCTGATGTTTCCATTGATTTATCTAAACCCTCGTAAATCTGTTCTCCGTTTCGATCTCTATCCTCTCCTTTTTCTCTCTCGCTGATTCGTGTTCTTGGATTCATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGTACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGGTTAGTTTTGTTTTTCCTCTCTGTTTCAACCTTTGCCCGCTCCATTCAACTTTAAAATTTTGATGTGTTAATTGTATTGTGTACTGGTGCGTGAATGTCTGTGCTCTCATAATCACTAGTCGCTGTGACTTGTGCCGCCTATAGGCAAGGATTAATTTTATGATTTAAGATTCTGTCAAATAGTAAAAGGTGATTTAGGAAAGCTATTACGTTTTGAGAAGATGAAAAATATGTACTACAGGCTGCTTATGGGTTCTGGTTTTTCTGATTTCAGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTAGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAATGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAGTAATGACTTTCTACACTATTAACTTCATGCCCGTTCTCCATTTGTGGAAGTGAATGACTTCTTTTAACTATGTTTCTGTTGCTTTGCATGCTTCAGTAATTCGATTTACTTGTAGCGTAGATATTGAATTAATTTAGTAGTGACAAATATTTTCTGGAAAATAGCCCTTTTCCTAAAGGATCTTGTCTAGAAGACTCCAAACAACAAAACCACTATGGGTTGGCTTAGTAGTCAAGAAGGGTCGGATCAAAAAGGTCTAGAGGGACTGAGTTTAAGCATGATGACCACCTATCTAAGATTTAATATCCCACGAGTTACCTTGATGACCAAATGTAGTAGTAGGGCCAAGTGACTGATGAAGATAGTTGAGTTGTGCAAAAGCTAGTCCTGACACTCGCGAATATGAAAAAAAAATCCAAACAACATGATCAAGTGTCTTTCCAAACTTGATTTATCAATCTAAACTTTGTGCACATACTTGGTTTTCAATTATAAGGTTTCTCTTGGTTTTCTACTCTGCTAATGGGTATGCAGTTATTTGGTTAACATTGTATTGCATGCATAAGAAGAAATGTTTTGAAAAGTGAGCTGCTTCATGCACGGTTCGACAAAGACACTGAGTTTTTTGTAAGCTTGAAGATTTTCTGGTCATAACTTTGAAGAGGTTTACAGTGGCAGGGAGCTCAGCTGGTATTAGAATACATGCTGTATTTGTTACTAAATCATCCGGTGAGACATTGAAGAAGTACGCAGGCTCCACTAACGTTGAGATATGGATAGCTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCCATCTCCTTTATTTCTCTTCTTGCAATCTCTGCAATGCTTGCTACTTGTTTCTTCGCTCATAGGCATCGAATAAGACGAGGACATTCTCGATCTTCTCATGCTCGAGAGTTTCGGGGCATAAGCAGACGAGTAGTTAAAGCAATGCCAAGCCTCATATTTACTACTGCTTTAGAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCACAGTAAGTTCACTCCTTTTCTTCTAAAATTTATATTTTATTGTTATGTATATATATTGCATTTATAGGAATACTAGTTATACTCCTTGTTATGGTGTGTTTGGTCCTTGTTTCTTTTACTTTCTTTTTCATCTATAGCTCAGAGGCCCAACTTTTGCGAATTCAAGTTTATAATAAATGAGCTCTTAATCTTTACAAAAGGAGTATAACTAAGGCCTTAACCACATATCCACCGAGTTCTTGTTCCTACTTAAGGCCTGAGAAATGTTGCCTTTTGCATCTCTGGTCTCATGCCTTTCAAAATCATGTCTGAGAGGTTCTTTGTTTAGTGGGATGATTTAGATGTCAATATTTTTCATCTTATCTATCATTGAGATGAACTCCCAAGGCAATGTTCCATCCCCCATTGCTGCCCTCCACGTTTCCTTGACACAGGAGCCTCCTTATTTTGTGACACTACAAAAATCTAGGAAAACATCATTAGGGCTGAGAGCCTGAGACTAGTAGCCAGGGTTTCAATCCATACCCTCAAAGCCTTTTATTATTCTTTTATCCCTTAATGGACCGTTATCTCCTGAAAAGTAGGTTATGTGCTCATTTTCAGTTTAATTATATAAAGAGAGGCTTCAGCCTACAAGGGCAGTCCCATTATCTAAGGCCTGTGGTCTCTAAGTAGCACGTACATAGAGGTCGCATGTAGCGAGCTTAATATGAAAATCCCTTGTTATCTATGAAGAAACTAATAGAGTTAGATAGGGCAAACTAAATGTGATCCTTTGGGCGGAAATGGACTTCATACCCGGTTTAGGTTTAAAGATTAGAGAGTCGTGCTCCACCAATATATAAACACACACACACATGCAGAGGCTTCAAAAGGAGGTCGAAGCTTCATGATCGCTGACCATCTACTGATTGATGTTTTCATCTCAACGTGAGCAGTTAACCATGTTTCTTTTTCCACAAATACTTCTTACCACCTGATTCTGTGGCAACTATGATATATTCAACGGGAATCTCTAAGGTTATTTTGTCAACAAAGTCTCATTTCTTTTCATCAAATATCCAACCCCAGTTCACCCCATTCAGCCACTAACTAGCTAAAAATTCTAGTAGTTTCCTTCGACCCTGTGCTTACAGGATCAAGATTGCACAAGTAGTCGTTATGCATCTTTTTTCCTTCTCTTTTCTTTTGTCATGCTATACTTTGCTTACATGCATACCTGCATTTGTTTCATATATAATGATCTAGCTAACCACCTGTGATTGGTACTGAAAATAGTTTAATTGTAAATGATTTCAGAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCTCCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCAGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGATACGGGCGCGTTGAGAATCCTTTGTTCAAAGATATTGCCTTCCTTTTTATGTAGAGGTTCTTCGGGTATGGTTGAATTATGGCATATCATCTTGTCTGTAAATCAATTCCTTGGTTCCTATATGGCCCGCATCATTGTATATTTTTTCATAGGATGGCTCCATTTCTTTTGGAGTTGTAAAGTGAAGCAGAGTGTATACTTCTGGGGTGGGTTTGAAATTCTTTTACGGATCATGGGATTAGATACACGGGGGACTTAGCTTAACAACTGATCAGGATGCAATATATTACCGCTTCTCTCTCCCTCTTCCTTCCTTGGAGGCCTGAAAGGATCGGTTTAACACAATTATTTGAAAAGGAGCTTCTGTTTTTTCCACATGCATCAATCTTTGCTTATTTGTATC

mRNA sequence

TATCATTATCAGACTTTTTTTCCGCATTGTTTCCGATTTGTGGTCGGAGCAGGCACATTCATTCTCGAGGGTGTATCTCTCAGCGAATCAAAGGAACGCAGATTTTCCTTCTGAGAGATGGAAGCTGATGTTTCCATTGATTTATCTAAACCCTCGTAAATCTGTTCTCCGTTTCGATCTCTATCCTCTCCTTTTTCTCTCTCGCTGATTCGTGTTCTTGGATTCATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGTACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTAGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAATGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCACAAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCTCCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCAGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGATACGGGCGCGTTGAGAATCCTTTGTTCAAAGATATTGCCTTCCTTTTTATGTAGAGGTTCTTCGGGTATGGTTGAATTATGGCATATCATCTTGTCTGTAAATCAATTCCTTGGTTCCTATATGGCCCGCATCATTGTATATTTTTTCATAGGATGGCTCCATTTCTTTTGGAGTTGTAAAGTGAAGCAGAGTGTATACTTCTGGGGTGGGTTTGAAATTCTTTTACGGATCATGGGATTAGATACACGGGGGACTTAGCTTAACAACTGATCAGGATGCAATATATTACCGCTTCTCTCTCCCTCTTCCTTCCTTGGAGGCCTGAAAGGATCGGTTTAACACAATTATTTGAAAAGGAGCTTCTGTTTTTTCCACATGCATCAATCTTTGCTTATTTGTATC

Coding sequence (CDS)

ATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGTACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTAGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAATGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCACAAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCTCCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCAGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGA

Protein sequence

MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACATLENNVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC

Homology

[Close]

BLAST of Cp4.1LG01g26100 vs. Swiss-Prot
Match: RMR2_ARATH (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Arabidopsis thaliana GN=RMR2 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.9e-57
Identity = 131/227 (57.71%), Postives = 163/227 (71.81%), Query Frame = 1


Query: 124 KDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 183
           +DN T+ TCAICLEDYT G+KLR+L C HKFHA+CVDSWLT+WRTFCPVCKRDARTSTG+
Sbjct: 224 EDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGE 283

Query: 184 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 243
           PP SESTPLLSS +SSF SSS+ SS RS   +  I  SL S   S S + + +++ Y++ 
Sbjct: 284 PPASESTPLLSSAASSFTSSSLHSSVRS--SALLIGPSLGSLPTSISFSPAYASSSYIRQ 343

Query: 244 SVRSSF---CP--SPSQRSVELRN-------ASSQRSYTSHLLSPYSSCYPSISPLHSRY 303
           S +SS     P  S S+ SV+LR        + SQRSY SH+ SP S  YP+ISP ++RY
Sbjct: 344 SFQSSSNRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRY 403

Query: 304 MIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           M P  PSPSN SP++ GSS++  NPL  S SA +FSP+ASA SLP+C
Sbjct: 404 MSPYRPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of Cp4.1LG01g26100 vs. Swiss-Prot
Match: RMR1_ORYSJ (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0167500 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-33
Identity = 98/199 (49.25%), Postives = 119/199 (59.80%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +DNCTS  CAICLEDY  GEKLR+L C HKFHA+CVD WLT WRTFCPVCKRDA T  
Sbjct: 226 VQEDNCTSSMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDASTGI 285

Query: 182 GDPPPSESTPLLSS-ISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPY 241
            DPP SE+TPLLSS +     SSS  SS  + PP     +S    S S SR ++ S TP 
Sbjct: 286 PDPPASETTPLLSSAVRLPSQSSSFRSSVAASPPR---PISRRPSSQSISRIYAASGTPN 345

Query: 242 LQHSVRS---SFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSIS-PLHSRYMIPLI 301
             + +RS   S   S S+ +V+L N SS R   SHL S +S     +S P++ RY  P +
Sbjct: 346 SPNPIRSFTNSTAMSISRSNVDLSNMSS-RPRASHLASAHSLVGSHLSPPINIRYASPHM 405

Query: 302 PSPSNTSPSIIGSSSHQHN 316
                 SPS   SSS+  N
Sbjct: 406 SHSGYASPSPHVSSSYVSN 420

[Close]

BLAST of Cp4.1LG01g26100 vs. Swiss-Prot
Match: RMR2_ORYSJ (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=RMR1 PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-33
Identity = 102/217 (47.00%), Postives = 131/217 (60.37%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +DN TS +CAICLEDY+ GEKLR+L C HKFHA+CVD WLT+W+TFCPVCKRDA   T
Sbjct: 226 VQEDNSTSSSCAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWKTFCPVCKRDASAGT 285

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSARS---LPPSSAIQVSLSSRSLSASRNHSLSTT 241
             PP SESTPLLSS+    A S+ LSS RS   + P   I+   SS+  S SR +S+S+ 
Sbjct: 286 SKPPASESTPLLSSVIHLSAESTALSSFRSTVAVSPPRPIRRHPSSQ--STSRAYSISSA 345

Query: 242 P---YLQHSVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSIS-PLHSRYMIP 301
           P    LQ    +S   S S+ +V+L N SSQ S+T H  S +S     +S P++ RY IP
Sbjct: 346 PRNYNLQRYYTNSPYISTSRSNVDLANMSSQWSHTPHQASMHSLRSGHLSLPINIRYTIP 405

Query: 302 LIPSP---------SNTSPSIIGSSSHQHNPLHISRS 323
            +            S+ S S  GS S+ H+ L   RS
Sbjct: 406 HVSRSDYGSASLGLSHDSCSHHGSPSYYHSSLGQQRS 440

[Close]

BLAST of Cp4.1LG01g26100 vs. Swiss-Prot
Match: RMR3_ARATH (Receptor homology region, transmembrane domain- and RING domain-containing protein 3 OS=Arabidopsis thaliana GN=RMR3 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-32
Identity = 96/213 (45.07%), Postives = 128/213 (60.09%), Query Frame = 1


Query: 125 DNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDP 184
           DN T  +CAICLEDY  G+KLR+L C HKFH +CVDSWL +WRTFCPVCKRDART+  +P
Sbjct: 225 DNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEP 284

Query: 185 PPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHS 244
             +ESTP L   SSS A+SS++      PP  +  VS S   +S+S  H    +      
Sbjct: 285 LATESTPFL---SSSIATSSLV--CIDSPPLGS-SVSFSPAHVSSSFIHQFVRS----SP 344

Query: 245 VRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSP 304
           +  S      +R      +SSQRS+ S + S +S  Y ++SPL++  M P  P PSN SP
Sbjct: 345 MNGSRISENLRRQASPLQSSSQRSHLS-MKSSHSLGYSTMSPLNAMGMSPYRPYPSNASP 404

Query: 305 SIIGSSSHQHNPLHISRSAASFSPFASAQSLPE 338
            +  S++H    L  + +A +FS FASA SLP+
Sbjct: 405 GLFSSTNH----LLSNYTANTFSHFASAHSLPD 422

[Close]

BLAST of Cp4.1LG01g26100 vs. Swiss-Prot
Match: RMR4_ARATH (Receptor homology region, transmembrane domain- and RING domain-containing protein 4 OS=Arabidopsis thaliana GN=RMR4 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-30
Identity = 99/229 (43.23%), Postives = 126/229 (55.02%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           I  +  TS+ C ICLE+Y  G+KLRIL CHHKFH +CVD WL   ++FCPVCKRDAR+ +
Sbjct: 224 ICDEATTSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSIS 283

Query: 182 GDPPPSESTPLLSSISS---------SFASSSILSSARSLPPSSAIQVSLSSRSLSASR- 241
            D PPSE TP LS   S         S +S++ L S+  LP S  +  SL S S+     
Sbjct: 284 TDKPPSEHTPFLSRTPSMTPTSSFLLSSSSTTPLQSSHELPISIRVDPSLPSTSMQPHTV 343

Query: 242 ----NHSLSTTPYLQHSVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPL 301
               +HS S T +   S R S     S+ S +LRNA SQRSY     SP+    P    L
Sbjct: 344 PMYLSHSRSHTSFQNGSNRFSRPIPVSRSSADLRNAVSQRSYN----SPHQVSLPRF--L 403

Query: 302 HSRYMIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLP 337
           HSRY   L P  ++ S  +   +S + + LH + S  SF  FASA SLP
Sbjct: 404 HSRYTHILGPGNASRSQVVGLLTSQREHSLHQNDSRRSFIHFASASSLP 446

[Close]

BLAST of Cp4.1LG01g26100 vs. TrEMBL
Match: A0A0A0LMS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403140 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.9e-88
Identity = 180/228 (78.95%), Postives = 192/228 (84.21%), Query Frame = 1


Query: 124 KDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 183
           +DNCTS+TCAICLEDYTPGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 236 EDNCTSMTCAICLEDYTPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 295

Query: 184 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 243
           PPPS STPLLSS  SS ASSSILSS+R SLPPSSAIQ+S + RS S SRNHSLS+TPYL 
Sbjct: 296 PPPSASTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPALRSPSVSRNHSLSSTPYLH 355

Query: 244 HSVRSSFCPSP------------SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSR 303
            S+ SS+  SP            S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSR
Sbjct: 356 QSLISSYHQSPRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSR 415

Query: 304 YMIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           YMIP IPSPSN SPSIIGSSSHQHNPLH S SAAS SPFAS +SLPEC
Sbjct: 416 YMIPHIPSPSNASPSIIGSSSHQHNPLHCSGSAASLSPFASTRSLPEC 463

[Close]

BLAST of Cp4.1LG01g26100 vs. TrEMBL
Match: W9R5V8_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_006853 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.2e-75
Identity = 159/223 (71.30%), Postives = 183/223 (82.06%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +DNCTS+TCAICLEDY+ GEKLRIL C HKFHA CVDSWLT+WRTFCPVCKRDARTST
Sbjct: 223 VLEDNCTSITCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 282

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVS-LSSRSLSASRNHSLSTTP 241
           GDPP SESTPLLSS  +S ASSS+LSS R SL  SSAIQ++  SSRS S SR +SL++T 
Sbjct: 283 GDPPASESTPLLSSSPASVASSSVLSSVRSSLASSSAIQIAPASSRSPSLSRPYSLASTS 342

Query: 242 YLQHSVRSSFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPL 301
           Y+Q S+RSS+  SP    S+ S++L+NASSQRS+ SHL+S YS  YPS SPL+SRY+ P 
Sbjct: 343 YVQQSLRSSYRQSPSPGVSRSSLDLQNASSQRSHASHLVSGYSLGYPSFSPLNSRYLSPH 402

Query: 302 IPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           IPSPSN SP  + SSSHQHNPLH S SAASFSPFASAQSLPEC
Sbjct: 403 IPSPSNASPPFVSSSSHQHNPLHCSESAASFSPFASAQSLPEC 445

[Close]

BLAST of Cp4.1LG01g26100 vs. TrEMBL
Match: A0A0D2S2G0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G130700 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 6.0e-70
Identity = 150/221 (67.87%), Postives = 175/221 (79.19%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +DNCTS+TCAICLEDYT GEKLRIL C HKFHA CVDSWLT WRTFCPVCKRDARTST
Sbjct: 229 VLEDNCTSITCAICLEDYTVGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTST 288

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLS-SRSLSASRNHSLSTTPY 241
           GDPP SESTPLLSS  S+ +SS++ S   SL  SSAIQ++ + SRS S +  HSL++ PY
Sbjct: 289 GDPPASESTPLLSSTLSTMSSSALSSVRSSLASSSAIQIAPAVSRSPSVAHTHSLASNPY 348

Query: 242 LQHSVRSSFCPSP---SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIP 301
           +Q S+R S+  SP   S+ SV+LRNASSQRS  SHL+SP S  YPSISPL++RY+ P  P
Sbjct: 349 IQQSLR-SYRQSPMSFSRSSVDLRNASSQRSRASHLVSPASLNYPSISPLNARYISPYFP 408

Query: 302 SPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           SPSN SPSI+ SS H  +PLH S SAASFSPFASAQSLP+C
Sbjct: 409 SPSNASPSIVSSSGHPLHPLHYSESAASFSPFASAQSLPDC 448

[Close]

BLAST of Cp4.1LG01g26100 vs. TrEMBL
Match: A0A061FJJ7_THECC (Protease-associated RING/U-box zinc finger family protein OS=Theobroma cacao GN=TCM_036380 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.3e-69
Identity = 156/222 (70.27%), Postives = 175/222 (78.83%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +DNCTS TCAICLEDYT GEKLRIL C HKFHA CVDSWLT WRTFCPVCKRDARTST
Sbjct: 267 VLEDNCTSRTCAICLEDYTMGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTST 326

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVS-LSSRSLSASRNHSLSTTP 241
           GDPP SESTPLLSS  SS  SSS+LSSAR SL  SSAIQ++  SS+  S S  H L++TP
Sbjct: 327 GDPPASESTPLLSSTPSS-VSSSVLSSARSSLASSSAIQIAPASSQCPSVSHIHPLTSTP 386

Query: 242 YLQHSVRS---SFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLI 301
           Y+Q S+RS   S   S S+ SV+LRN SSQRS+ SHL+SP S  YPSISPL++RYM P  
Sbjct: 387 YVQQSLRSCHQSPSISLSRSSVDLRNTSSQRSHASHLVSPASLNYPSISPLNARYMSPYF 446

Query: 302 PSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           PSPSN SPS++ SS HQ +PL  S SAASFSPFASAQSLPEC
Sbjct: 447 PSPSNASPSLVSSSGHQLHPLRCSESAASFSPFASAQSLPEC 487

[Close]

BLAST of Cp4.1LG01g26100 vs. TrEMBL
Match: A0A0B0MJ41_GOSAR (E3 ubiquitin-protein ligase OS=Gossypium arboreum GN=F383_20218 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.0e-69
Identity = 149/221 (67.42%), Postives = 174/221 (78.73%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +DNCTS+TCAICLEDYT GEKLRIL C HKFHA CVDSWLT WRTFCPVCKRDARTST
Sbjct: 229 VLEDNCTSITCAICLEDYTVGEKLRILPCRHKFHAFCVDSWLTTWRTFCPVCKRDARTST 288

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLS-SRSLSASRNHSLSTTPY 241
           GDPP SESTPLLSS  S+ +SS++ S   SL  SSAIQ++ + SRS S +  HSL++ PY
Sbjct: 289 GDPPASESTPLLSSTLSTMSSSALSSVRSSLASSSAIQIAPALSRSPSIAHTHSLASNPY 348

Query: 242 LQHSVRSSFCPSP---SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIP 301
           +Q S+R S+  SP   S+ SV+LRNASSQRS  SHL+SP S  YPSISPL++RY+ P  P
Sbjct: 349 IQQSLR-SYRQSPMSFSRSSVDLRNASSQRSRASHLVSPASLNYPSISPLNARYISPYFP 408

Query: 302 SPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           SPSN SPSI+ SS H  +PLH S SA SFSPFASAQSLP+C
Sbjct: 409 SPSNASPSIVSSSGHLLHPLHYSESATSFSPFASAQSLPDC 448

[Close]

BLAST of Cp4.1LG01g26100 vs. TAIR10
Match: AT1G71980.1 (AT1G71980.1 Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 223.0 bits (567), Expect = 2.8e-58
Identity = 131/227 (57.71%), Postives = 163/227 (71.81%), Query Frame = 1


Query: 124 KDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 183
           +DN T+ TCAICLEDYT G+KLR+L C HKFHA+CVDSWLT+WRTFCPVCKRDARTSTG+
Sbjct: 224 EDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGE 283

Query: 184 PPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 243
           PP SESTPLLSS +SSF SSS+ SS RS   +  I  SL S   S S + + +++ Y++ 
Sbjct: 284 PPASESTPLLSSAASSFTSSSLHSSVRS--SALLIGPSLGSLPTSISFSPAYASSSYIRQ 343

Query: 244 SVRSSF---CP--SPSQRSVELRN-------ASSQRSYTSHLLSPYSSCYPSISPLHSRY 303
           S +SS     P  S S+ SV+LR        + SQRSY SH+ SP S  YP+ISP ++RY
Sbjct: 344 SFQSSSNRRSPPISVSRSSVDLRQQAASPSPSPSQRSYISHMASPQSLGYPTISPFNTRY 403

Query: 304 MIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           M P  PSPSN SP++ GSS++  NPL  S SA +FSP+ASA SLP+C
Sbjct: 404 MSPYRPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of Cp4.1LG01g26100 vs. TAIR10
Match: AT1G22670.1 (AT1G22670.1 Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-33
Identity = 96/213 (45.07%), Postives = 128/213 (60.09%), Query Frame = 1


Query: 125 DNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDP 184
           DN T  +CAICLEDY  G+KLR+L C HKFH +CVDSWL +WRTFCPVCKRDART+  +P
Sbjct: 225 DNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEP 284

Query: 185 PPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHS 244
             +ESTP L   SSS A+SS++      PP  +  VS S   +S+S  H    +      
Sbjct: 285 LATESTPFL---SSSIATSSLV--CIDSPPLGS-SVSFSPAHVSSSFIHQFVRS----SP 344

Query: 245 VRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSP 304
           +  S      +R      +SSQRS+ S + S +S  Y ++SPL++  M P  P PSN SP
Sbjct: 345 MNGSRISENLRRQASPLQSSSQRSHLS-MKSSHSLGYSTMSPLNAMGMSPYRPYPSNASP 404

Query: 305 SIIGSSSHQHNPLHISRSAASFSPFASAQSLPE 338
            +  S++H    L  + +A +FS FASA SLP+
Sbjct: 405 GLFSSTNH----LLSNYTANTFSHFASAHSLPD 422

[Close]

BLAST of Cp4.1LG01g26100 vs. TAIR10
Match: AT4G09560.1 (AT4G09560.1 Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31
Identity = 99/229 (43.23%), Postives = 126/229 (55.02%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           I  +  TS+ C ICLE+Y  G+KLRIL CHHKFH +CVD WL   ++FCPVCKRDAR+ +
Sbjct: 224 ICDEATTSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSIS 283

Query: 182 GDPPPSESTPLLSSISS---------SFASSSILSSARSLPPSSAIQVSLSSRSLSASR- 241
            D PPSE TP LS   S         S +S++ L S+  LP S  +  SL S S+     
Sbjct: 284 TDKPPSEHTPFLSRTPSMTPTSSFLLSSSSTTPLQSSHELPISIRVDPSLPSTSMQPHTV 343

Query: 242 ----NHSLSTTPYLQHSVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPL 301
               +HS S T +   S R S     S+ S +LRNA SQRSY     SP+    P    L
Sbjct: 344 PMYLSHSRSHTSFQNGSNRFSRPIPVSRSSADLRNAVSQRSYN----SPHQVSLPRF--L 403

Query: 302 HSRYMIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLP 337
           HSRY   L P  ++ S  +   +S + + LH + S  SF  FASA SLP
Sbjct: 404 HSRYTHILGPGNASRSQVVGLLTSQREHSLHQNDSRRSFIHFASASSLP 446

[Close]

BLAST of Cp4.1LG01g26100 vs. TAIR10
Match: AT1G35630.1 (AT1G35630.1 Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-22
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +++ TSVTCAIC++DY  GEKLRIL C HK+HA C+DSWL   R+FCPVCK++ RT  
Sbjct: 223 VLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGN 282

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSARSLP 214
             PP SE+TPL+S   +S  S   L S   LP
Sbjct: 283 DVPPASETTPLISPSPNSITS---LQSFYDLP 311

[Close]

BLAST of Cp4.1LG01g26100 vs. TAIR10
Match: AT1G35625.1 (AT1G35625.1 RING/U-box superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-20
Identity = 49/92 (53.26%), Postives = 62/92 (67.39%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + ++  TSVTCAIC++DY  GE LRIL C HK+HA C+DSWL   R+FCPVCK++ RT  
Sbjct: 106 VLEEGSTSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGN 165

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSARSLP 214
             PP SE+TPL+S   +S  S   L S   LP
Sbjct: 166 DVPPASETTPLISPGPNSITS---LQSFYDLP 194

[Close]

BLAST of Cp4.1LG01g26100 vs. NCBI nr
Match: gi|659081241|ref|XP_008441228.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90
Identity = 182/220 (82.73%), Postives = 194/220 (88.18%), Query Frame = 1


Query: 124 KDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 183
           +DNCTS+TCAICLEDY+PGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 235 EDNCTSITCAICLEDYSPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 294

Query: 184 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 243
           PPPSESTPLLSS  SS ASSSILSS+R SLPPSSAIQ+S S RS S SRNHSLS TPYL 
Sbjct: 295 PPPSESTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPSLRSPSVSRNHSLSGTPYLH 354

Query: 244 HSVRSSFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 303
            S+RSS+  SP    S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSRY+IP IPS
Sbjct: 355 QSLRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYLIPHIPS 414

Query: 304 PSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           PSN SPSIIGSSSHQHNPLH S SAAS SPFASA+SLPEC
Sbjct: 415 PSNASPSIIGSSSHQHNPLHCSGSAASLSPFASARSLPEC 454

[Close]

BLAST of Cp4.1LG01g26100 vs. NCBI nr
Match: gi|659081243|ref|XP_008441229.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90
Identity = 182/220 (82.73%), Postives = 194/220 (88.18%), Query Frame = 1


Query: 124 KDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 183
           +DNCTS+TCAICLEDY+PGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 232 EDNCTSITCAICLEDYSPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 291

Query: 184 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 243
           PPPSESTPLLSS  SS ASSSILSS+R SLPPSSAIQ+S S RS S SRNHSLS TPYL 
Sbjct: 292 PPPSESTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPSLRSPSVSRNHSLSGTPYLH 351

Query: 244 HSVRSSFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 303
            S+RSS+  SP    S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSRY+IP IPS
Sbjct: 352 QSLRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYLIPHIPS 411

Query: 304 PSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           PSN SPSIIGSSSHQHNPLH S SAAS SPFASA+SLPEC
Sbjct: 412 PSNASPSIIGSSSHQHNPLHCSGSAASLSPFASARSLPEC 451

[Close]

BLAST of Cp4.1LG01g26100 vs. NCBI nr
Match: gi|778673001|ref|XP_004138647.2| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 4.1e-88
Identity = 180/228 (78.95%), Postives = 192/228 (84.21%), Query Frame = 1


Query: 124 KDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 183
           +DNCTS+TCAICLEDYTPGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 236 EDNCTSMTCAICLEDYTPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 295

Query: 184 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 243
           PPPS STPLLSS  SS ASSSILSS+R SLPPSSAIQ+S + RS S SRNHSLS+TPYL 
Sbjct: 296 PPPSASTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPALRSPSVSRNHSLSSTPYLH 355

Query: 244 HSVRSSFCPSP------------SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSR 303
            S+ SS+  SP            S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSR
Sbjct: 356 QSLISSYHQSPRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSR 415

Query: 304 YMIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           YMIP IPSPSN SPSIIGSSSHQHNPLH S SAAS SPFAS +SLPEC
Sbjct: 416 YMIPHIPSPSNASPSIIGSSSHQHNPLHCSGSAASLSPFASTRSLPEC 463

[Close]

BLAST of Cp4.1LG01g26100 vs. NCBI nr
Match: gi|778672997|ref|XP_011649908.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 4.1e-88
Identity = 180/228 (78.95%), Postives = 192/228 (84.21%), Query Frame = 1


Query: 124 KDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 183
           +DNCTS+TCAICLEDYTPGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 239 EDNCTSMTCAICLEDYTPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 298

Query: 184 PPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 243
           PPPS STPLLSS  SS ASSSILSS+R SLPPSSAIQ+S + RS S SRNHSLS+TPYL 
Sbjct: 299 PPPSASTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPALRSPSVSRNHSLSSTPYLH 358

Query: 244 HSVRSSFCPSP------------SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSR 303
            S+ SS+  SP            S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSR
Sbjct: 359 QSLISSYHQSPRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSR 418

Query: 304 YMIPLIPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           YMIP IPSPSN SPSIIGSSSHQHNPLH S SAAS SPFAS +SLPEC
Sbjct: 419 YMIPHIPSPSNASPSIIGSSSHQHNPLHCSGSAASLSPFASTRSLPEC 466

[Close]

BLAST of Cp4.1LG01g26100 vs. NCBI nr
Match: gi|703093595|ref|XP_010094981.1| (E3 ubiquitin-protein ligase [Morus notabilis])

HSP 1 Score: 289.3 bits (739), Expect = 8.9e-75
Identity = 159/223 (71.30%), Postives = 183/223 (82.06%), Query Frame = 1


Query: 122 IAKDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 181
           + +DNCTS+TCAICLEDY+ GEKLRIL C HKFHA CVDSWLT+WRTFCPVCKRDARTST
Sbjct: 223 VLEDNCTSITCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 282

Query: 182 GDPPPSESTPLLSSISSSFASSSILSSAR-SLPPSSAIQVS-LSSRSLSASRNHSLSTTP 241
           GDPP SESTPLLSS  +S ASSS+LSS R SL  SSAIQ++  SSRS S SR +SL++T 
Sbjct: 283 GDPPASESTPLLSSSPASVASSSVLSSVRSSLASSSAIQIAPASSRSPSLSRPYSLASTS 342

Query: 242 YLQHSVRSSFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPL 301
           Y+Q S+RSS+  SP    S+ S++L+NASSQRS+ SHL+S YS  YPS SPL+SRY+ P 
Sbjct: 343 YVQQSLRSSYRQSPSPGVSRSSLDLQNASSQRSHASHLVSGYSLGYPSFSPLNSRYLSPH 402

Query: 302 IPSPSNTSPSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 339
           IPSPSN SP  + SSSHQHNPLH S SAASFSPFASAQSLPEC
Sbjct: 403 IPSPSNASPPFVSSSSHQHNPLHCSESAASFSPFASAQSLPEC 445

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g26100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RMR2_ARATH	4.9e-57	57.71	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
RMR1_ORYSJ	2.9e-33	49.25	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
RMR2_ORYSJ	2.9e-33	47.00	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
RMR3_ARATH	1.9e-32	45.07	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
RMR4_ARATH	2.3e-30	43.23	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of Cp4.1LG01g26100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMS9_CUCSA	2.9e-88	78.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G403140 PE=4 SV=1	[more]
W9R5V8_9ROSA	6.2e-75	71.30	E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_006853 PE=4 SV=1	[more]
A0A0D2S2G0_GOSRA	6.0e-70	67.87	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G130700 PE=4 SV=1	[more]
A0A061FJJ7_THECC	2.3e-69	70.27	Protease-associated RING/U-box zinc finger family protein OS=Theobroma cacao GN=...	[more]
A0A0B0MJ41_GOSAR	3.0e-69	67.42	E3 ubiquitin-protein ligase OS=Gossypium arboreum GN=F383_20218 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g26100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71980.1	2.8e-58	57.71	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G22670.1	1.1e-33	45.07	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT4G09560.1	1.3e-31	43.23	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G35630.1	5.4e-22	54.35	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G35625.1	1.0e-20	53.26	RING/U-box superfamily protein	[more]

BLAST of Cp4.1LG01g26100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081241\|ref\|XP_008441228.1\|	1.5e-90	82.73	PREDICTED: receptor homology region, transmembrane domain- and RING domain-conta...	[more]
gi\|659081243\|ref\|XP_008441229.1\|	1.5e-90	82.73	PREDICTED: receptor homology region, transmembrane domain- and RING domain-conta...	[more]
gi\|778673001\|ref\|XP_004138647.2\|	4.1e-88	78.95	PREDICTED: receptor homology region, transmembrane domain- and RING domain-conta...	[more]
gi\|778672997\|ref\|XP_011649908.1\|	4.1e-88	78.95	PREDICTED: receptor homology region, transmembrane domain- and RING domain-conta...	[more]
gi\|703093595\|ref\|XP_010094981.1\|	8.9e-75	71.30	E3 ubiquitin-protein ligase [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g26100.1	Cp4.1LG01g26100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 131..174 score: 3.7
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 132..173 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 132..174 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 130..176 score: 7.3
None	No IPR available	GENE3D	G3DSA:3.50.30.30		coord: 84..121 score: 1.
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 25..302 score: 2.3
None	No IPR available	PANTHER	PTHR22765:SF46	SUBFAMILY NOT NAMED	coord: 25..302 score: 2.3
None	No IPR available	unknown	SSF52025	PA domain	coord: 77..121 score: 3.2
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 126..187 score: 2.06

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g26100	Cucsa.088270	Cucumber (Gy14) v1	cgycpeB0164
Cp4.1LG01g26100	CmaCh15G000380	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g26100	CmaCh04G030070	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g26100	CmoCh04G031270	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g26100	CmoCh15G000370	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g26100	Cla011903	Watermelon (97103) v1	cpewmB454
Cp4.1LG01g26100	Csa2G403140	Cucumber (Chinese Long) v2	cpecuB386
Cp4.1LG01g26100	MELO3C008126	Melon (DHL92) v3.5.1	cpemeB400
Cp4.1LG01g26100	ClCG11G008080	Watermelon (Charleston Gray)	cpewcgB356
Cp4.1LG01g26100	CSPI02G25010	Wild cucumber (PI 183967)	cpecpiB385
Cp4.1LG01g26100	Lsi03G004540	Bottle gourd (USVL1VR-Ls)	cpelsiB339
Cp4.1LG01g26100	MELO3C008126.2	Melon (DHL92) v3.6.1	cpemedB465
Cp4.1LG01g26100	CsaV3_2G033530	Cucumber (Chinese Long) v3	cpecucB0482
Cp4.1LG01g26100	Bhi04G002050	Wax gourd	cpewgoB0525
Cp4.1LG01g26100	CsGy2G024730	Cucumber (Gy14) v2	cgybcpeB214
Cp4.1LG01g26100	Carg22860	Silver-seed gourd	carcpeB1509
Cp4.1LG01g26100	Carg06080	Silver-seed gourd	carcpeB0034

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g26100	Cp4.1LG13g11620	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:

None