Carg06080 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06080
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
Location	Cucurbita_argyrosperma_scaffold_026 : 953819 .. 956740 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGGACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGGTTAGTTTTGTTTTTCCTCTCTGTTTCAACCTTTGCCTGCTCCATTCAACTTTAAAATTTTGATGTGTTAATTGTATTGTGTACTGGTGCGTGCTTTGATTGAATGTCTGTGCTCTCGTAATCACTAGTCGTTGTGACTTGTGCCGCCTATAGGCAAGGATTAATTTTATGATTTAAGATTCTGTCAAATAGTAAAAGGTGATTTAGGAAAGCTATTATGTTTTGAGAAGATGAAAAATATGTACTGCAGGCTGCTTATGGGTTCTGGTTTTTCTGATTTCAGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTGGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAAAGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAGTAATGACTTTCTACACTATTAACTTCATGCCCGTTCTCCATTTGTGGAAGTGAATGACTTCTTTTAACTATGTTTCTGTTGCTTTGCATGCTTCAGTAATTCGGTTTACTTGTAGTGTAGATATTGAATTAAATTTAGCAGTGACAAATGTAGTAGGGCCAAGTGACTGATGAAGATAGTTGAGTTGTGCAAAAGCTAGTCCTGACACTCACGAATATGAAAAAAAAATCCAAACAACATGATCAAGTGCCTTTCCAAACTTGATTTATCAATCTAAACTTTGTGCCCATACTTGGTTTTCAATTATAAGGTTTCTCTTGGTTTTCTACTCTGCTAATGGGTATGCAGTTATTTGGTTAACATTGTATTGCATGCATAAGAAGAAATGTTTTGAAAAGTGAGCTGCTTTATGCACGGTTCTACAAAGACACTGAGTTTTTTGTAAGCTTGAAGATTTTCTGGTCATAACTTTGAAGAGGTTTACAGTGGCAGGGAGCTCAGCTGGTATTAGAATACATGCTGTATTTGTTACTAAATCATCCGGTGAGACATTGAAGAAGTACGCAGGCTCCGCTAACGTTGAGATATGGATAGCTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCCATCTCCTTTATTTCTCTTCTTGCAATCTCTGCAATGCTTGCTACTTGTTTCTTCGCTCATAGGCATCGAATAAGACGAGGACATTCTCGATCTTCTCAGGCTCGAGAGTTTCGGGGCATAAGCAGACGAGTAGTTAAAGCAATGCCAAGCCTCATTTTTACTACTGCTTTAGAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCATAGTAAGTTCACTCCTTTTCTTCTAAAATTTATATTTTATTGTTATGTATATATATTGCATTTATAGGAATACTAGTTATACTCCTTGTTATGGTGTGTTTATAATAAATGATCTATAGCTCAGAGGCCCAACTTTTGCGAATTCAAGTTTATAATAAATGAGCTCTTAATCTTTACAAAAGGAGTATAACTAAGGCCTTAACCACATATCCACCGAATTCTTGTGCCTACTTAAGGCCTCAGAAATGTTGTCTTTTGCATCTCTGGTCTCATGCCTTTCAAAATCATGTCTGAGAGATTCTTTGTTTAGTGGGATGATTTAGATGTCAATATTTTTCATCTTATCTAATATATAAACACACACACACACACACACATGCAGAGGCTTCAAAAGGAGGTCGAAGCTTCATGATTCTCTGACCATATACTGCTTGATGTTTTCATCTCAACGTGAGCAGTTAACCATGTTTCTTTTTCCACAAATACTTCTTACCTCCTGATTCTGTGGCAACTATGATATATTCAACGGGAATCTCTAAGGTTATTTTGTCAACAAAGTCTCATTTCTTTTCATCAAATATCCAACCCCAGTTCACCCCATTCAACCACTAACTAGCTAAGAATTCTAGTAGTTTCCTTCGACCCTGTGCTTACAGGATCAAGATTGCACAAGTAGTCTTTATGCGTCTTTTTCCCTTCTCTTTTCTTTTGTCATGCTATACTTTGCTTACATGCATACCTGCATTTGTTTCATATATAATGATCTAGCTAACCACCTGTGATCGGTACTGAAAATAGTTTAATTGTAAATGATTTCAGAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCACCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCGGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGA

mRNA sequence

ATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGGACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTGGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAAAGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAATTTTCTGGTCATAACTTTGAAGAGGTTTACAGTGGCAGGGAGCTCAGCTGGTATTAGAATACATGCTGTATTTGTTACTAAATCATCCGGTGAGACATTGAAGAAGTACGCAGGCTCCGCTAACGTTGAGATATGGATAGCTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCCATCTCCTTTATTTCTCTTCTTGCAATCTCTGCAATGCTTGCTACTTGTTTCTTCGCTCATAGGCATCGAATAAGACGAGGACATTCTCGATCTTCTCAGGCTCGAGAGTTTCGGGGCATAAGCAGACGAGTAGTTAAAGCAATGCCAAGCCTCATTTTTACTACTGCTTTAGAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCATAAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCACCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCGGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGA

Coding sequence (CDS)

ATGGCTTTGAGTGCTGCGAATTCAGGTCTTGCGTTTTTGTTTTTGCTTCTTTTGGTTGGTTGTTGCGGCTCCGCAGCTAATGTGGTATTGATTGGGACCAACCTTACTCTTTCGATCGACTCCATTGAAGCTGATTTTGCTCCTACAATAGCAAGTTCTGGGGATCCTGGGGTGTTGTATCTGGCAAATCCTCTTGATGCATGCGCCACATTGGAAAATAAAGTTCAGCTGCCTGTAACCAATAGTTCACCATTTGCGCTTATAATTAGAGGAGGATGTAGCTTCGAGGATAAAGTGAGGAGAGCCCAAGTGGCTGGATTTAAAGCTGCAATTGTATATGACAATAAGGATGGTGGTGGCCTCATTGCGAATTTTCTGGTCATAACTTTGAAGAGGTTTACAGTGGCAGGGAGCTCAGCTGGTATTAGAATACATGCTGTATTTGTTACTAAATCATCCGGTGAGACATTGAAGAAGTACGCAGGCTCCGCTAACGTTGAGATATGGATAGCTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCCATCTCCTTTATTTCTCTTCTTGCAATCTCTGCAATGCTTGCTACTTGTTTCTTCGCTCATAGGCATCGAATAAGACGAGGACATTCTCGATCTTCTCAGGCTCGAGAGTTTCGGGGCATAAGCAGACGAGTAGTTAAAGCAATGCCAAGCCTCATTTTTACTACTGCTTTAGAGGATAATTGTACGTCAGTAACATGTGCCATATGCCTCGAGGACTATACTCCTGGTGAAAAACTCAGAATTCTACAATGTCATCATAAATTTCATGCCTCCTGTGTGGACTCTTGGCTTACTGCTTGGAGAACTTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGAATCCACTCCATTGCTTTCAAGCATTTCCAGCTCTTTCGCTTCCTCCTCAATATTATCTTCTGCGAGATCATTACCACCAAGCTCTGCCATACAAGTATCCCTGTCATCAAGATCACTTTCGGCATCTCGGAACCACTCTCTCTCTACCACCCCTTACCTTCAGCATTCTGTTAGATCCACCTTCTGCCCATCTCCATCCCAGAGATCAGTCGAACTCAGAAATGCATCCTCCCAGAGATCTTATACTTCGCATTTGCTTTCACCATATTCCTCGTGTTACCCGTCCATATCACCTTTACACTCAAGATACATGATTCCGCTTATTCCGAGTCCAAGCAACACCTCACCAAGCATAATAGGCTCTTCCAGTCATCAACATAATCCCTTGCATATAAGCGGGTCAGCTGCAAGTTTTTCTCCATTTGCTTCAGCTCAGTCTCTTCCTGAATGCTGA

Protein sequence

MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTPLLSSISSSFASSSILSSARSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC

Homology

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_022958340.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 817.4 bits (2110), Expect = 2.5e-233
Identity = 440/455 (96.70%), Postives = 442/455 (97.14%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLP+TNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPLTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGH RSS AREFRGISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHPRSSHAREFRGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_023533724.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 812.4 bits (2097), Expect = 7.9e-232
Identity = 438/455 (96.26%), Postives = 440/455 (96.70%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLEN VQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENNVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGS NVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSTNVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSS AREFRGISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSHAREFRGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRS+FCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHIS SAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISRSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_022990023.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita maxima])

HSP 1 Score: 809.7 bits (2090), Expect = 5.1e-231
Identity = 436/455 (95.82%), Postives = 439/455 (96.48%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSAAN GLAFLF+LLL GCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY
Sbjct: 1   MALSAANPGLAFLFMLLLAGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG
Sbjct: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLAISAMLATCFFAHRHRIRRGH RSS AREF GISRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHPRSSHAREFWGISRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360
           PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH
Sbjct: 301 PPPSESTPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 360

Query: 361 SVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420
           SVRS+FCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS
Sbjct: 361 SVRSSFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 420

Query: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC
Sbjct: 421 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 444

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_023550607.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 650.6 bits (1677), Expect = 4.0e-183
Identity = 362/460 (78.70%), Postives = 384/460 (83.48%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSA N GLA LF LLLVG CG AANVVLIGTN+TLS DS+EA+FAP I S G+PGVLY
Sbjct: 1   MALSAMNPGLALLFSLLLVGSCGCAANVVLIGTNVTLSFDSVEANFAPAIGSPGEPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LA PLDAC+TLE+   LPV +SSPF LIIRGGCSFEDKVRRAQ+AGFKAAI+YDN+DGGG
Sbjct: 61  LAKPLDACSTLESNTALPVNSSSPFVLIIRGGCSFEDKVRRAQMAGFKAAIIYDNEDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAG ANVEIWI PSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGLANVEIWIVPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLA+SA+LATCFF  RHRIRRG  RSS A+EFRG+SRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSSHAQEFRGMSRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYT GEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTAGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSS-ISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 360
           PPPSESTPLLSS      XXXXXXXXXX                   SRNH LS+TPYLQ
Sbjct: 301 PPPSESTPLLSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRNHYLSSTPYLQ 360

Query: 361 HSVRSTF----CPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 420
            S+RS++      S S+ SVELRNASSQRSY SHL+SPYSSCYPS+SPLHSRYMIPLIPS
Sbjct: 361 QSLRSSYHHASSLSISRSSVELRNASSQRSYASHLVSPYSSCYPSMSPLHSRYMIPLIPS 420

Query: 421 PSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSN SPSIIGSSSHQHNPLH SGSAASFSPFASAQSLPEC
Sbjct: 421 PSNASPSIIGSSSHQHNPLHCSGSAASFSPFASAQSLPEC 449

[Close]

BLAST of Carg06080 vs. NCBI nr
Match: XP_022939223.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 645.6 bits (1664), Expect = 1.3e-181
Identity = 360/460 (78.26%), Postives = 382/460 (83.04%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           MALSA N GLA LF LLLVG CG AANVVLIGTN+TLS DS+EA+FAP I S G+PGVLY
Sbjct: 1   MALSAMNPGLALLFSLLLVGSCGCAANVVLIGTNVTLSFDSVEANFAPAIGSPGEPGVLY 60

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LA PLDAC+TLE+   LPV +SSPF LIIRGGCSFEDKVRRAQ+AGFKAAI+YDN+DGGG
Sbjct: 61  LAKPLDACSTLESNTALPVNSSSPFVLIIRGGCSFEDKVRRAQMAGFKAAIIYDNEDGGG 120

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTKSSGETLKKYAG ANVEIWI PSFENSAWS
Sbjct: 121 LIA-----------MAGSSAGIRIHAVFVTKSSGETLKKYAGLANVEIWIVPSFENSAWS 180

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLA+SA+LATCFF  RHRIRRG  RSS A+EFRG+SRRVVKAMPSLIFTTAL
Sbjct: 181 IMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSSHAQEFRGMSRRVVKAMPSLIFTTAL 240

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTSVTCAICLEDYT GEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 241 EDNCTSVTCAICLEDYTAGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 300

Query: 301 PPPSESTPLLSS-ISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 360
           PPPSESTPLLSS      XXXXXXXXXX                      HSLS+TPYLQ
Sbjct: 301 PPPSESTPLLSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSLSSTPYLQ 360

Query: 361 HSVRSTF----CPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 420
            S+RS++      S S+ SVELRNASSQRSY SHL+SPYSSCYPS+SPLHSRYMIPLIPS
Sbjct: 361 QSLRSSYHQASSLSISRSSVELRNASSQRSYASHLVSPYSSCYPSMSPLHSRYMIPLIPS 420

Query: 421 PSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSN SPSIIGSSSHQHNPLH SGSAASFSPFASAQSLPEC
Sbjct: 421 PSNASPSIIGSSSHQHNPLHCSGSAASFSPFASAQSLPEC 449

[Close]

BLAST of Carg06080 vs. TAIR10
Match: AT1G71980.1 (Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 471.5 bits (1212), Expect = 6.0e-133
Identity = 266/463 (57.45%), Postives = 333/463 (71.92%), Query Frame = 0


Query: 7   NSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 66
           N  L  L  +  V C  S + V+L+  N+TLS D IEA+FAP++  +G+ GV+Y+A PLD
Sbjct: 2   NRALVLLLYVCTVSCLAS-SKVILMRNNITLSFDDIEANFAPSVKGTGEIGVVYVAEPLD 61

Query: 67  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 126
           AC  L NK +     +SPF LI+RGGCSFE+KVR+AQ AGFKAAI+YDN+D G LIA   
Sbjct: 62  ACQNLMNKPEQSSNETSPFVLIVRGGCSFEEKVRKAQRAGFKAAIIYDNEDRGTLIA--- 121

Query: 127 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 186
                   +AG+S GIRIHAVFVTK +GE LK+YAG  + ++W+ PSFENSAWSIMA+SF
Sbjct: 122 --------MAGNSGGIRIHAVFVTKETGEVLKEYAGFPDTKVWLIPSFENSAWSIMAVSF 181

Query: 187 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 246
           ISLLA+SA+LATCFF  RHRIRR  SRSS+ REF G+SRR+VKAMPSLIF++  EDN T+
Sbjct: 182 ISLLAMSAVLATCFFVRRHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSFHEDNTTA 241

Query: 247 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 306
            TCAICLEDYT G+KLR+L C HKFHA+CVDSWLT+WRTFCPVCKRDARTSTG+PP SES
Sbjct: 242 FTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEPPASES 301

Query: 307 TPLLSSISSSFXXXXXXXXXXSLPPSSAIQV--SLSSRSLSASRNHSLSTTPYLQHSVRS 366
           TPLLSS +SSF          S   SSA+ +  SL S   S S + + +++ Y++ S +S
Sbjct: 302 TPLLSSAASSF----TSSSLHSSVRSSALLIGPSLGSLPTSISFSPAYASSSYIRQSFQS 361

Query: 367 TF---CP--SPSQRSVELRNAS-------SQRSYTSHLLSPYSSCYPSISPLHSRYMIPL 426
           +     P  S S+ SV+LR  +       SQRSY SH+ SP S  YP+ISP ++RYM P 
Sbjct: 362 SSNRRSPPISVSRSSVDLRQQAASPSPXXSQRSYISHMASPQSLGYPTISPFNTRYMSPY 421

Query: 427 IPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
            PSPSN SP++ GSS++  NPL  S SA +FSP+ASA SLP+C
Sbjct: 422 RPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of Carg06080 vs. TAIR10
Match: AT4G09560.1 (Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 327.8 bits (839), Expect = 1.1e-89
Identity = 209/462 (45.24%), Postives = 272/462 (58.87%), Query Frame = 0


Query: 8   SGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDA 67
           S +  L LLL+      +A V+LIG + +LS D +EA F P I  S   GVLY+A PLDA
Sbjct: 4   SSIVILSLLLISHLV--SAKVLLIGNSTSLSFDDVEATFTPMIKRSDQGGVLYVAEPLDA 63

Query: 68  CATLENKVQLP--VTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANF 127
           C+ L N V +    T S P+ LIIRGGCSFEDK+R AQ AG+KAAIVYD +D G L+   
Sbjct: 64  CSDLVNTVNVKNGTTVSPPYVLIIRGGCSFEDKIRNAQKAGYKAAIVYDYEDFGFLV--- 123

Query: 128 LVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAIS 187
                   ++AG+ +G+ I+  FV+K++GE LK+YAG  + E+W+ PSFE SAWSIMAIS
Sbjct: 124 --------SMAGNPSGVLIYGTFVSKATGEVLKEYAGRTDFEVWLMPSFETSAWSIMAIS 183

Query: 188 FISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCT 247
           FISLLA+SA+LATCFF  RHR+RR    +    +F  + + ++  MP+ IF    ++  T
Sbjct: 184 FISLLAMSAVLATCFFVRRHRVRRRRILALNGNDFHRMPKSMIIRMPTTIFNGICDEATT 243

Query: 248 SVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSE 307
           S+ C ICLE+Y  G+KLRIL CHHKFH +CVD WL   ++FCPVCKRDAR+ + D PPSE
Sbjct: 244 SILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPPSE 303

Query: 308 STPLLSSISS---------SFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASR-----NHS 367
            TP LS   S         S            LP S  +  SL S S+         +HS
Sbjct: 304 HTPFLSRTPSMTPTSSFLLSSSSTTPLQSSHELPISIRVDPSLPSTSMQPHTVPMYLSHS 363

Query: 368 LSTTPYLQHSVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIP 427
            S T +   S R +     S+ S +LRNA SQRSY     SP+    P    LHSRY   
Sbjct: 364 RSHTSFQNGSNRFSRPIPVSRSSADLRNAVSQRSYN----SPHQVSLPRF--LHSRYTHI 423

Query: 428 LIPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLP 454
           L P  ++ S  +   +S + + LH + S  SF  FASA SLP
Sbjct: 424 LGPGNASRSQVVGLLTSQREHSLHQNDSRRSFIHFASASSLP 446

[Close]

BLAST of Carg06080 vs. TAIR10
Match: AT1G22670.1 (Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 299.7 bits (766), Expect = 3.1e-81
Identity = 201/453 (44.37%), Postives = 272/453 (60.04%), Query Frame = 0


Query: 10  LAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACA 69
           L    LL +V     A  V+L+ +N+T S   +EADF+P++ ++ + GV+Y+A PL+AC 
Sbjct: 7   LILTLLLFIVSYVVDAGQVILVDSNITRSFVDMEADFSPSV-TTVETGVVYVAEPLNACR 66

Query: 70  TLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVIT 129
            L NK +     +SP  LIIRGGCSFE KVR AQ +GFKAAIVYDN D      NFL   
Sbjct: 67  NLRNKPEQSPYGTSPLVLIIRGGCSFEYKVRNAQRSGFKAAIVYDNVD-----RNFL--- 126

Query: 130 LKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIW-IAPSFENSAWSIMA-ISFI 189
                + G S GI+I AVFV K +GE LKKYAGS  +E+  + P+ E+S WS+ A I+ I
Sbjct: 127 ---SAMGGDSDGIKIQAVFVMKRAGEMLKKYAGSEEMEVMLVPPNTEDSVWSLYASIALI 186

Query: 190 SLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSV 249
             LAI  ++ TC F +R+     +S S    +F G+ RR VKAMPS+ FT A  DN T  
Sbjct: 187 LSLAIFCVMVTCVFFYRYCSTIRNSTS----QFNGMCRRTVKAMPSVTFTCAKIDNTTGF 246

Query: 250 TCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSEST 309
           +CAICLEDY  G+KLR+L C HKFH +CVDSWL +WRTFCPVCKRDART+  +P  +EST
Sbjct: 247 SCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEPLATEST 306

Query: 310 PLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTFC 369
           P LSS               S+  SS + +       S S + +  ++ ++   VRS+  
Sbjct: 307 PFLSS---------------SIATSSLVCIDSPPLGSSVSFSPAHVSSSFIHQFVRSS-P 366

Query: 370 PSPSQRSVELR------NASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSP 429
            + S+ S  LR       +SSQRS+ S + S +S  Y ++SPL++  M P  P PSN SP
Sbjct: 367 MNGSRISENLRRQASPLQSSSQRSHLS-MKSSHSLGYSTMSPLNAMGMSPYRPYPSNASP 422

Query: 430 SIIGSSSHQHNPLHISGSAASFSPFASAQSLPE 455
            +  S++H    L  + +A +FS FASA SLP+
Sbjct: 427 GLFSSTNH----LLSNYTANTFSHFASAHSLPD 422

[Close]

BLAST of Carg06080 vs. TAIR10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein)

HSP 1 Score: 273.1 bits (697), Expect = 3.1e-73
Identity = 146/303 (48.18%), Postives = 205/303 (67.66%), Query Frame = 0


Query: 17  LLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACATLENKVQ 76
           LLV C  ++A VVLIG N  LS D +EA F P + +SG+ G+LY+A PL+AC+ + N  +
Sbjct: 11  LLVICKLASAKVVLIGKNTILSFDDVEATFTPIVRNSGECGILYVAEPLEACSDITNMAE 70

Query: 77  LPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVITLKRFTVA 136
                 S + LI+ GGCSFE+KVR+AQ AG+KAAIVY++     L+            +A
Sbjct: 71  KRSKYRSSYVLIVLGGCSFEEKVRKAQKAGYKAAIVYNDGYDELLV-----------PMA 130

Query: 137 GSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFISLLAISAML 196
           G+S+G+ IH + VT++SGE LK YA    +++W+ P F  S+WSIM I+FISLLA+SA+L
Sbjct: 131 GNSSGVDIHGLLVTRASGEVLKGYADQDEMKLWLIPGFGISSWSIMGITFISLLAMSAIL 190

Query: 197 ATCFFAHRHRIRRGHSRSSQAREFRGIS---RRVVKAMPSLIFTTALEDNCTSVTCAICL 256
           ATCF   RH+IR+  S        +G+S   R ++++MP+ +++  LE++ TSVTCAIC+
Sbjct: 191 ATCFVVRRHQIRQ--SVRDLPHGGQGLSCMPRDLLQSMPTEVYSGVLEESSTSVTCAICI 250

Query: 257 EDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTPLLSSI 316
           +DY  GEKLRIL C HK+HA C+DSWL   R+FCPVCK++ RT    PP SE+TPL+S  
Sbjct: 251 DDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPRTGNDVPPASETTPLISPS 300

[Close]

BLAST of Carg06080 vs. TAIR10
Match: AT5G66160.1 (receptor homology region transmembrane domain ring H2 motif protein 1)

HSP 1 Score: 188.7 bits (478), Expect = 7.7e-48
Identity = 122/291 (41.92%), Postives = 161/291 (55.33%), Query Frame = 0


Query: 12  FLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACATL 71
           FL  LL V    S A VVL   +++ S   + A F  ++  +G  G LY+A+PLD C+ L
Sbjct: 15  FLSSLLRV----SLATVVL--NSISASFADLPAKFDGSVTKNGICGALYVADPLDGCSPL 74

Query: 72  ENKVQLPVT--NSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVIT 131
            +      T   ++ FALIIRG CSFEDK+  AQ +GF+A IVYDN D   LI       
Sbjct: 75  LHAAASNWTQHRTTKFALIIRGECSFEDKLLNAQNSGFQAVIVYDNIDNEDLI------- 134

Query: 132 LKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFISL 191
                +  +   I + AVFV+  +GE L+KYA   + E  + P    SAW+++AISF SL
Sbjct: 135 ----VMKVNPQDITVDAVFVSNVAGEILRKYARGRDGECCLNPPDRGSAWTVLAISFFSL 194

Query: 192 LAISAMLATCFFAHRH--RIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSV 251
           L I   L   FFA RH  + R  H+R+ +      +  ++V  +P   FT +        
Sbjct: 195 LLIVTFLLIAFFAPRHWTQWRGRHTRTIR------LDAKLVHTLPCFTFTDSAHHK-AGE 254

Query: 252 TCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTST 299
           TCAICLEDY  GE LR+L C H FH +C+DSWLT W T CPVCK D RT T
Sbjct: 255 TCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTET 281

[Close]

BLAST of Carg06080 vs. Swiss-Prot
Match: sp|Q8VZ14|RMR2_ARATH (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=RMR2 PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.1e-131
Identity = 266/463 (57.45%), Postives = 333/463 (71.92%), Query Frame = 0


Query: 7   NSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 66
           N  L  L  +  V C  S + V+L+  N+TLS D IEA+FAP++  +G+ GV+Y+A PLD
Sbjct: 2   NRALVLLLYVCTVSCLAS-SKVILMRNNITLSFDDIEANFAPSVKGTGEIGVVYVAEPLD 61

Query: 67  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 126
           AC  L NK +     +SPF LI+RGGCSFE+KVR+AQ AGFKAAI+YDN+D G LIA   
Sbjct: 62  ACQNLMNKPEQSSNETSPFVLIVRGGCSFEEKVRKAQRAGFKAAIIYDNEDRGTLIA--- 121

Query: 127 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 186
                   +AG+S GIRIHAVFVTK +GE LK+YAG  + ++W+ PSFENSAWSIMA+SF
Sbjct: 122 --------MAGNSGGIRIHAVFVTKETGEVLKEYAGFPDTKVWLIPSFENSAWSIMAVSF 181

Query: 187 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 246
           ISLLA+SA+LATCFF  RHRIRR  SRSS+ REF G+SRR+VKAMPSLIF++  EDN T+
Sbjct: 182 ISLLAMSAVLATCFFVRRHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSFHEDNTTA 241

Query: 247 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 306
            TCAICLEDYT G+KLR+L C HKFHA+CVDSWLT+WRTFCPVCKRDARTSTG+PP SES
Sbjct: 242 FTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKRDARTSTGEPPASES 301

Query: 307 TPLLSSISSSFXXXXXXXXXXSLPPSSAIQV--SLSSRSLSASRNHSLSTTPYLQHSVRS 366
           TPLLSS +SSF          S   SSA+ +  SL S   S S + + +++ Y++ S +S
Sbjct: 302 TPLLSSAASSF----TSSSLHSSVRSSALLIGPSLGSLPTSISFSPAYASSSYIRQSFQS 361

Query: 367 TF---CP--SPSQRSVELRNAS-------SQRSYTSHLLSPYSSCYPSISPLHSRYMIPL 426
           +     P  S S+ SV+LR  +       SQRSY SH+ SP S  YP+ISP ++RYM P 
Sbjct: 362 SSNRRSPPISVSRSSVDLRQQAASPSPXXSQRSYISHMASPQSLGYPTISPFNTRYMSPY 421

Query: 427 IPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
            PSPSN SP++ GSS++  NPL  S SA +FSP+ASA SLP+C
Sbjct: 422 RPSPSNASPAMAGSSNYPLNPLRYSESAGTFSPYASANSLPDC 448

[Close]

BLAST of Carg06080 vs. Swiss-Prot
Match: sp|Q10R93|RMR1_ORYSJ (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.1e-104
Identity = 230/426 (53.99%), Postives = 281/426 (65.96%), Query Frame = 0


Query: 15  LLLLVGCCGS--------AANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 74
           +LLL+  C +        AANVVL+GTNLTLS D +EA FAP +  SG  GV+Y A PLD
Sbjct: 7   MLLLICLCATFCLMTQLGAANVVLMGTNLTLSFDDVEASFAPGVKGSGFEGVVYTAEPLD 66

Query: 75  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 134
           AC+ L +K +      SPFALIIRGGC+F++KV+ AQ AGFKAAIVYDN++ G LI    
Sbjct: 67  ACSPLTSKAE--KGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLI---- 126

Query: 135 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 194
                  ++AGSS GI I+AVF++K+SGE LKK++G  +VE+WI P+FENSAWSIMAISF
Sbjct: 127 -------SMAGSSGGIHIYAVFISKASGEVLKKFSGHTDVEVWILPAFENSAWSIMAISF 186

Query: 195 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 254
           ISLLA+SA+LATCFF  RH IRR   R  +AREF G+S ++VKAMPSLIFT   EDNCTS
Sbjct: 187 ISLLAMSAVLATCFFVRRHHIRRDRPRIPEAREFHGMSSQLVKAMPSLIFTKVQEDNCTS 246

Query: 255 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 314
             CAICLEDY  GEKLR+L C HKFHA+CVD WLT WRTFCPVCKRDA T   DPP SE+
Sbjct: 247 SMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDASTGIPDPPASET 306

Query: 315 TPLLSSI------SSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQH 374
           TPLLSS       SSSF          S+  S    +S    S S SR ++ S TP   +
Sbjct: 307 TPLLSSAVRLPSQSSSF--------RSSVAASPPRPISRRPSSQSISRIYAASGTPNSPN 366

Query: 375 SVRS---TFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSIS-PLHSRYMIPLIPSP 423
            +RS   +   S S+ +V+L N SS R   SHL S +S     +S P++ RY  P +   
Sbjct: 367 PIRSFTNSTAMSISRSNVDLSNMSS-RPRASHLASAHSLVGSHLSPPINIRYASPHMSHS 410

[Close]

BLAST of Carg06080 vs. Swiss-Prot
Match: sp|Q69U49|RMR2_ORYSJ (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RMR1 PE=2 SV=2)

HSP 1 Score: 359.8 bits (922), Expect = 4.6e-98
Identity = 222/441 (50.34%), Postives = 282/441 (63.95%), Query Frame = 0


Query: 10  LAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACA 69
           L F  ++ L+   G A NVVLI  N TLS D +EA F P +  SG  G +Y   PLDAC+
Sbjct: 11  LLFCAVICLMAQQG-ACNVVLIANNTTLSFDDVEATFTPEVKDSGVNGAIYAVEPLDACS 70

Query: 70  TLENK-VQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVI 129
            L  K    PV   SPFAL+IRGGC F+DKVR AQ AGFKA IVYD++D G L+      
Sbjct: 71  PLRKKAANGPV---SPFALVIRGGCQFDDKVRNAQNAGFKAVIVYDDEDSGVLV------ 130

Query: 130 TLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISFIS 189
                ++AGSS+GI I+AVF++K+SGE LKKY+G ++VE+WI P +ENSAWSIMAISF S
Sbjct: 131 -----SMAGSSSGIYIYAVFLSKASGEVLKKYSGQSDVEVWILPVYENSAWSIMAISFTS 190

Query: 190 LLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSVT 249
           LLA++A+LATCFF  RH+IRR   R    REF G+S ++VKAMPSLIFT   EDN TS +
Sbjct: 191 LLAMAAVLATCFFVRRHQIRRDRGRIPVTREFHGMSSQLVKAMPSLIFTKVQEDNSTSSS 250

Query: 250 CAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSESTP 309
           CAICLEDY+ GEKLR+L C HKFHA+CVD WLT+W+TFCPVCKRDA   T  PP SESTP
Sbjct: 251 CAICLEDYSFGEKLRVLPCRHKFHATCVDMWLTSWKTFCPVCKRDASAGTSKPPASESTP 310

Query: 310 LLSSI---SSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTP---YLQHSV 369
           LLSS+   S+            ++ P   I+   SS+  S SR +S+S+ P    LQ   
Sbjct: 311 LLSSVIHLSAESTALSSFRSTVAVSPPRPIRRHPSSQ--STSRAYSISSAPRNYNLQRYY 370

Query: 370 RSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSIS-PLHSRYMIPLIPSPSNTSP 429
            ++   S S+ +V+L N SSQ S+T H  S +S     +S P++ RY IP +      S 
Sbjct: 371 TNSPYISTSRSNVDLANMSSQWSHTPHQASMHSLRSGHLSLPINIRYTIPHVSRSDYGSA 430

Query: 430 SI---IGSSSHQHNPLHISGS 440
           S+     S SH  +P +   S
Sbjct: 431 SLGLSHDSCSHHGSPSYYHSS 434

[Close]

BLAST of Carg06080 vs. Swiss-Prot
Match: sp|Q0WPW5|RMR4_ARATH (Receptor homology region, transmembrane domain- and RING domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=RMR4 PE=2 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.9e-88
Identity = 209/462 (45.24%), Postives = 272/462 (58.87%), Query Frame = 0


Query: 8   SGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDA 67
           S +  L LLL+      +A V+LIG + +LS D +EA F P I  S   GVLY+A PLDA
Sbjct: 4   SSIVILSLLLISHLV--SAKVLLIGNSTSLSFDDVEATFTPMIKRSDQGGVLYVAEPLDA 63

Query: 68  CATLENKVQLP--VTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANF 127
           C+ L N V +    T S P+ LIIRGGCSFEDK+R AQ AG+KAAIVYD +D G L+   
Sbjct: 64  CSDLVNTVNVKNGTTVSPPYVLIIRGGCSFEDKIRNAQKAGYKAAIVYDYEDFGFLV--- 123

Query: 128 LVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAIS 187
                   ++AG+ +G+ I+  FV+K++GE LK+YAG  + E+W+ PSFE SAWSIMAIS
Sbjct: 124 --------SMAGNPSGVLIYGTFVSKATGEVLKEYAGRTDFEVWLMPSFETSAWSIMAIS 183

Query: 188 FISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCT 247
           FISLLA+SA+LATCFF  RHR+RR    +    +F  + + ++  MP+ IF    ++  T
Sbjct: 184 FISLLAMSAVLATCFFVRRHRVRRRRILALNGNDFHRMPKSMIIRMPTTIFNGICDEATT 243

Query: 248 SVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSE 307
           S+ C ICLE+Y  G+KLRIL CHHKFH +CVD WL   ++FCPVCKRDAR+ + D PPSE
Sbjct: 244 SILCCICLENYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKRDARSISTDKPPSE 303

Query: 308 STPLLSSISS---------SFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASR-----NHS 367
            TP LS   S         S            LP S  +  SL S S+         +HS
Sbjct: 304 HTPFLSRTPSMTPTSSFLLSSSSTTPLQSSHELPISIRVDPSLPSTSMQPHTVPMYLSHS 363

Query: 368 LSTTPYLQHSVRSTFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIP 427
            S T +   S R +     S+ S +LRNA SQRSY     SP+    P    LHSRY   
Sbjct: 364 RSHTSFQNGSNRFSRPIPVSRSSADLRNAVSQRSYN----SPHQVSLPRF--LHSRYTHI 423

Query: 428 LIPSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLP 454
           L P  ++ S  +   +S + + LH + S  SF  FASA SLP
Sbjct: 424 LGPGNASRSQVVGLLTSQREHSLHQNDSRRSFIHFASASSLP 446

[Close]

BLAST of Carg06080 vs. Swiss-Prot
Match: sp|F4I2Y3|RMR3_ARATH (Receptor homology region, transmembrane domain- and RING domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=RMR3 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.6e-80
Identity = 201/453 (44.37%), Postives = 272/453 (60.04%), Query Frame = 0


Query: 10  LAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLDACA 69
           L    LL +V     A  V+L+ +N+T S   +EADF+P++ ++ + GV+Y+A PL+AC 
Sbjct: 7   LILTLLLFIVSYVVDAGQVILVDSNITRSFVDMEADFSPSV-TTVETGVVYVAEPLNACR 66

Query: 70  TLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFLVIT 129
            L NK +     +SP  LIIRGGCSFE KVR AQ +GFKAAIVYDN D      NFL   
Sbjct: 67  NLRNKPEQSPYGTSPLVLIIRGGCSFEYKVRNAQRSGFKAAIVYDNVD-----RNFL--- 126

Query: 130 LKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIW-IAPSFENSAWSIMA-ISFI 189
                + G S GI+I AVFV K +GE LKKYAGS  +E+  + P+ E+S WS+ A I+ I
Sbjct: 127 ---SAMGGDSDGIKIQAVFVMKRAGEMLKKYAGSEEMEVMLVPPNTEDSVWSLYASIALI 186

Query: 190 SLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTSV 249
             LAI  ++ TC F +R+     +S S    +F G+ RR VKAMPS+ FT A  DN T  
Sbjct: 187 LSLAIFCVMVTCVFFYRYCSTIRNSTS----QFNGMCRRTVKAMPSVTFTCAKIDNTTGF 246

Query: 250 TCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSEST 309
           +CAICLEDY  G+KLR+L C HKFH +CVDSWL +WRTFCPVCKRDART+  +P  +EST
Sbjct: 247 SCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWRTFCPVCKRDARTTADEPLATEST 306

Query: 310 PLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRSTFC 369
           P LSS               S+  SS + +       S S + +  ++ ++   VRS+  
Sbjct: 307 PFLSS---------------SIATSSLVCIDSPPLGSSVSFSPAHVSSSFIHQFVRSS-P 366

Query: 370 PSPSQRSVELR------NASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSP 429
            + S+ S  LR       +SSQRS+ S + S +S  Y ++SPL++  M P  P PSN SP
Sbjct: 367 MNGSRISENLRRQASPLQSSSQRSHLS-MKSSHSLGYSTMSPLNAMGMSPYRPYPSNASP 422

Query: 430 SIIGSSSHQHNPLHISGSAASFSPFASAQSLPE 455
            +  S++H    L  + +A +FS FASA SLP+
Sbjct: 427 GLFSSTNH----LLSNYTANTFSHFASAHSLPD 422

[Close]

BLAST of Carg06080 vs. TrEMBL
Match: tr|A0A1S3B2Z2|A0A1S3B2Z2_CUCME (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485424 PE=4 SV=1)

HSP 1 Score: 633.6 bits (1633), Expect = 3.3e-178
Identity = 354/460 (76.96%), Postives = 383/460 (83.26%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           + L+  N  LA LF LLLV   GSAANVVLIG N+TLS DSIEA+FAP+I SSG+PGVLY
Sbjct: 4   LLLTPMNPRLALLFSLLLVLSSGSAANVVLIGANITLSFDSIEANFAPSIESSGEPGVLY 63

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LA PLDAC+TLENKV +PV +SSPFALI+RGGCSFEDKVRRAQVAGFKAAI+YDN+D GG
Sbjct: 64  LAKPLDACSTLENKVVVPVNSSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNED-GG 123

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA        +F VAGSSAGIRIHAVFVTK+SGETLKKYAG ANVEIWI PSFENSAWS
Sbjct: 124 LIA--------KFAVAGSSAGIRIHAVFVTKTSGETLKKYAGLANVEIWIIPSFENSAWS 183

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLA+SA+LATCFF  RHRIRRG  RS  ++EFRG+SRRVVKAMPSLIFTTAL
Sbjct: 184 IMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSFYSQEFRGMSRRVVKAMPSLIFTTAL 243

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTS+TCAICLEDY+PGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 244 EDNCTSITCAICLEDYSPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 303

Query: 301 PPPSESTPLL-SSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 360
           PPPSESTPLL        XXXXXXXXXX                 S SRNHSLS TPYL 
Sbjct: 304 PPPSESTPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSRNHSLSGTPYLH 363

Query: 361 HSVRSTFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 420
            S+RS++  SP    S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSRY+IP IPS
Sbjct: 364 QSLRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYLIPHIPS 423

Query: 421 PSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSN SPSIIGSSSHQHNPLH SGSAAS SPFASA+SLPEC
Sbjct: 424 PSNASPSIIGSSSHQHNPLHCSGSAASLSPFASARSLPEC 454

[Close]

BLAST of Carg06080 vs. TrEMBL
Match: tr|A0A1S3B2Y0|A0A1S3B2Y0_CUCME (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485424 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 1.4e-176
Identity = 352/460 (76.52%), Postives = 381/460 (82.83%), Query Frame = 0


Query: 1   MALSAANSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLY 60
           + L+  N  LA LF LLLV   GSAANVVLIG N+TLS DSIEA+FAP+I SSG+PGVLY
Sbjct: 4   LLLTPMNPRLALLFSLLLVLSSGSAANVVLIGANITLSFDSIEANFAPSIESSGEPGVLY 63

Query: 61  LANPLDACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGG 120
           LA PLDAC+TLENKV +PV +SSPFALI+RGGCSFEDKVRRAQVAGFKAAI+YDN+D GG
Sbjct: 64  LAKPLDACSTLENKVVVPVNSSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNED-GG 123

Query: 121 LIANFLVITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWS 180
           LIA           +AGSSAGIRIHAVFVTK+SGETLKKYAG ANVEIWI PSFENSAWS
Sbjct: 124 LIA-----------MAGSSAGIRIHAVFVTKTSGETLKKYAGLANVEIWIIPSFENSAWS 183

Query: 181 IMAISFISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTAL 240
           IMAISFISLLA+SA+LATCFF  RHRIRRG  RS  ++EFRG+SRRVVKAMPSLIFTTAL
Sbjct: 184 IMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSFYSQEFRGMSRRVVKAMPSLIFTTAL 243

Query: 241 EDNCTSVTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGD 300
           EDNCTS+TCAICLEDY+PGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGD
Sbjct: 244 EDNCTSITCAICLEDYSPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGD 303

Query: 301 PPPSESTPLL-SSISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQ 360
           PPPSESTPLL        XXXXXXXXXX                 S SRNHSLS TPYL 
Sbjct: 304 PPPSESTPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSRNHSLSGTPYLH 363

Query: 361 HSVRSTFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPS 420
            S+RS++  SP    S+ SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSRY+IP IPS
Sbjct: 364 QSLRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYLIPHIPS 423

Query: 421 PSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSN SPSIIGSSSHQHNPLH SGSAAS SPFASA+SLPEC
Sbjct: 424 PSNASPSIIGSSSHQHNPLHCSGSAASLSPFASARSLPEC 451

[Close]

BLAST of Carg06080 vs. TrEMBL
Match: tr|A0A0A0LMS9|A0A0A0LMS9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403140 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 7.2e-173
Identity = 349/462 (75.54%), Postives = 371/462 (80.30%), Query Frame = 0


Query: 7   NSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 66
           N  LA LF LLLV   GSAANVVLIG N+TLS DSIEA+FAP+I SSG+PGVLYLA PLD
Sbjct: 14  NPRLALLFSLLLVLSSGSAANVVLIGANVTLSFDSIEANFAPSIESSGEPGVLYLAKPLD 73

Query: 67  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 126
           AC+TLENKV +PV  SSPFALI+RGGCSFEDKVRRAQVAGFKAAI+YDN+D GGLIA   
Sbjct: 74  ACSTLENKVVVPVNTSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNED-GGLIA--- 133

Query: 127 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 186
                   +AGSSAGIRIHAVFVTK+SGETLKKYAG ANVEIWI PSFENSAWSIMAISF
Sbjct: 134 --------MAGSSAGIRIHAVFVTKTSGETLKKYAGLANVEIWIVPSFENSAWSIMAISF 193

Query: 187 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 246
           ISLLA+SA+LATCFF  RHRIRRG  RSS  +EFRG+SRRVVKAMPSLIFTTALEDNCTS
Sbjct: 194 ISLLAMSAVLATCFFVRRHRIRRGRPRSSHTQEFRGMSRRVVKAMPSLIFTTALEDNCTS 253

Query: 247 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 306
           +TCAICLEDYTPGEKLRIL C HKFHA CVDSWLTAWRTFCPVCKRDARTSTGDPPPS S
Sbjct: 254 MTCAICLEDYTPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGDPPPSAS 313

Query: 307 TPLLSSISSSFXXXXXXXXXXSLPPSSAIQVSLSS-RSLSASRNHSLSTTPYLQHSVRS- 366
           TPL        XXXXXXXXXX             + RS S SRNHSLS+TPYL  S+ S 
Sbjct: 314 TPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRSPSVSRNHSLSSTPYLHQSLISX 373

Query: 367 -----------TFCPSPSQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLI 426
                               SVELRNASSQRSYTSHL+SPYSSCYPS+SPLHSRYMIP I
Sbjct: 374 XXXXXXXXXXXXXXXXXXXXSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYMIPHI 433

Query: 427 PSPSNTSPSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           PSPSN SPSIIGSSSHQHNPLH SGSAAS SPFAS +SLPEC
Sbjct: 434 PSPSNASPSIIGSSSHQHNPLHCSGSAASLSPFASTRSLPEC 463

[Close]

BLAST of Carg06080 vs. TrEMBL
Match: tr|A0A2N9FDA4|A0A2N9FDA4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13085 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.3e-145
Identity = 299/453 (66.00%), Postives = 345/453 (76.16%), Query Frame = 0


Query: 7   NSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 66
           NS +  L L +  G C +AANV+LIG N+TLS + IEA+FAP +  SGD GVLY+A PLD
Sbjct: 2   NSAVVLLLLCVFSGFCMAAANVMLIGNNVTLSFEDIEANFAPPVRGSGDCGVLYMAEPLD 61

Query: 67  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 126
           AC+TL NKV+     SSPF LIIRGGCSFEDKVRRAQ AGFKAAIVYDN+D G L+A   
Sbjct: 62  ACSTLTNKVEQAPNVSSPFVLIIRGGCSFEDKVRRAQTAGFKAAIVYDNEDSGVLVA--- 121

Query: 127 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 186
                   +AG+SAGI+ HAVFV+K+SGE L KY G  + E+WI PSFENSAWSIMAISF
Sbjct: 122 --------MAGNSAGIKTHAVFVSKASGEILTKYTGLIDTELWIIPSFENSAWSIMAISF 181

Query: 187 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 246
           ISLLA+SA+LATCFF  RHRIRR   R+S+ REF G+S R+VKAMPSLIFT+ LEDNCTS
Sbjct: 182 ISLLAMSAVLATCFFVRRHRIRRERPRASRVREFHGMSSRLVKAMPSLIFTSVLEDNCTS 241

Query: 247 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 306
           +TCAICLEDY+ GEKLRIL C HKFHA CVDSWLT WRTFCPVCKRDART+TG+PP SES
Sbjct: 242 ITCAICLEDYSVGEKLRILPCRHKFHALCVDSWLTTWRTFCPVCKRDARTNTGNPPASES 301

Query: 307 TPLLSS-ISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRST 366
           TPLLSS      XXXXXXXXXX             SRS S SR HS+++TPY+Q+S+RS 
Sbjct: 302 TPLLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPSVSRIHSVASTPYVQNSLRSY 361

Query: 367 FCPSP---SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTSPS 426
               P   S+ SV+LRNASSQRS+ SHL+SP+S  YPS SP  SR+M P IPSPS+ S S
Sbjct: 362 RQSPPMSVSRSSVDLRNASSQRSHASHLISPHSLGYPSYSPYTSRFMSPHIPSPSSASIS 421

Query: 427 IIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
            +GSS  Q +PLH S SAASFSPFASAQSLPEC
Sbjct: 422 FVGSSGRQQHPLHCSESAASFSPFASAQSLPEC 443

[Close]

BLAST of Carg06080 vs. TrEMBL
Match: tr|W9R5V8|W9R5V8_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis OX=981085 GN=L484_006853 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.4e-144
Identity = 297/455 (65.27%), Postives = 343/455 (75.38%), Query Frame = 0


Query: 7   NSGLAFLFLLLLVGCCGSAANVVLIGTNLTLSIDSIEADFAPTIASSGDPGVLYLANPLD 66
           NS + F  + LL G    +ANVVLIG N+TLS D IEA+FAP I  SG+ GVLY A P+D
Sbjct: 2   NSVVVFSVMFLLSGFSLISANVVLIGNNVTLSFDDIEANFAPAIKGSGECGVLYSAEPVD 61

Query: 67  ACATLENKVQLPVTNSSPFALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIANFL 126
           AC+ L NKV+     SSPFALIIRGGCSFE+KVRRAQ AGFKAAIVYDN++GG L+A   
Sbjct: 62  ACSKLTNKVKPAKNGSSPFALIIRGGCSFEEKVRRAQEAGFKAAIVYDNENGGALVA--- 121

Query: 127 VITLKRFTVAGSSAGIRIHAVFVTKSSGETLKKYAGSANVEIWIAPSFENSAWSIMAISF 186
                   +AG+SAGI+IHAVFV+K+SGE LKKYAG  ++E+W+ PSFENSAWSIMAISF
Sbjct: 122 --------MAGNSAGIKIHAVFVSKASGEKLKKYAGLTDMEVWLIPSFENSAWSIMAISF 181

Query: 187 ISLLAISAMLATCFFAHRHRIRRGHSRSSQAREFRGISRRVVKAMPSLIFTTALEDNCTS 246
           ISLLA+SA+LATCFF  RHRIRR   R+S  REF G+S R+V+AMPSLIFT  LEDNCTS
Sbjct: 182 ISLLAMSAVLATCFFVRRHRIRRERPRASHVREFHGMSSRLVRAMPSLIFTAVLEDNCTS 241

Query: 247 VTCAICLEDYTPGEKLRILQCHHKFHASCVDSWLTAWRTFCPVCKRDARTSTGDPPPSES 306
           +TCAICLEDY+ GEKLRIL C HKFHA CVDSWLT+WRTFCPVCKRDARTSTGDPP SES
Sbjct: 242 ITCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGDPPASES 301

Query: 307 TPLLS--SISSSFXXXXXXXXXXSLPPSSAIQVSLSSRSLSASRNHSLSTTPYLQHSVRS 366
           TPLLS        XXXXXXXXXX                    R +S  +T Y+Q S+RS
Sbjct: 302 TPLLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPYSXXSTSYVQQSLRS 361

Query: 367 TFCPSP----SQRSVELRNASSQRSYTSHLLSPYSSCYPSISPLHSRYMIPLIPSPSNTS 426
           ++  SP    S+ S++L+NASSQRS+ SHL+S YS  YPS SPL+SRY+ P IPSPSN S
Sbjct: 362 SYRQSPSPGVSRSSLDLQNASSQRSHASHLVSGYSLGYPSFSPLNSRYLSPHIPSPSNAS 421

Query: 427 PSIIGSSSHQHNPLHISGSAASFSPFASAQSLPEC 456
           P  + SSSHQHNPLH S SAASFSPFASAQSLPEC
Sbjct: 422 PPFVSSSSHQHNPLHCSESAASFSPFASAQSLPEC 445

The following BLAST results are available for this feature:

BLAST of Carg06080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958340.1	2.5e-233	96.70	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
XP_023533724.1	7.9e-232	96.26	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
XP_022990023.1	5.1e-231	95.82	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
XP_023550607.1	4.0e-183	78.70	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
XP_022939223.1	1.3e-181	78.26	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of Carg06080 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71980.1	6.0e-133	57.45	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT4G09560.1	1.1e-89	45.24	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G22670.1	3.1e-81	44.37	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT1G35630.1	3.1e-73	48.18	Protease-associated (PA) RING/U-box zinc finger family protein	[more]
AT5G66160.1	7.7e-48	41.92	receptor homology region transmembrane domain ring H2 motif protein 1	[more]

BLAST of Carg06080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VZ14\|RMR2_ARATH	1.1e-131	57.45	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
sp\|Q10R93\|RMR1_ORYSJ	1.1e-104	53.99	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
sp\|Q69U49\|RMR2_ORYSJ	4.6e-98	50.34	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
sp\|Q0WPW5\|RMR4_ARATH	1.9e-88	45.24	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
sp\|F4I2Y3\|RMR3_ARATH	5.6e-80	44.37	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]

BLAST of Carg06080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B2Z2\|A0A1S3B2Z2_CUCME	3.3e-178	76.96	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
tr\|A0A1S3B2Y0\|A0A1S3B2Y0_CUCME	1.4e-176	76.52	receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
tr\|A0A0A0LMS9\|A0A0A0LMS9_CUCSA	7.2e-173	75.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G403140 PE=4 SV=1	[more]
tr\|A0A2N9FDA4\|A0A2N9FDA4_FAGSY	1.3e-145	66.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13085 PE=4 SV=1	[more]
tr\|W9R5V8\|W9R5V8_9ROSA	1.4e-144	65.27	E3 ubiquitin-protein ligase OS=Morus notabilis OX=981085 GN=L484_006853 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003137	PA_domain
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06080-RA	Carg06080-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 249..290 e-value: 1.0E-8 score: 44.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 248..291 e-value: 1.1E-11 score: 44.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 249..291 score: 12.445
None	No IPR available	GENE3D	G3DSA:3.50.30.30		coord: 28..173 e-value: 6.4E-22 score: 80.0
None	No IPR available	PANTHER	PTHR22765:SF60	SUBFAMILY NOT NAMED	coord: 17..402
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 17..402
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 248..291 e-value: 1.39237E-20 score: 83.8153
None	No IPR available	CDD	cd02123	PA_C_RZF_like	coord: 24..178 e-value: 2.66318E-43 score: 149.797
None	No IPR available	SUPERFAMILY	SSF52025	PA domain	coord: 77..165
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 242..304
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 208..296 e-value: 1.7E-18 score: 68.1
IPR003137	PA domain	PFAM	PF02225	PA	coord: 80..157 e-value: 1.1E-6 score: 28.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06080	Cla011903	Watermelon (97103) v1	carwmB0021
Carg06080	Csa2G403140	Cucumber (Chinese Long) v2	carcuB0018
Carg06080	MELO3C008126	Melon (DHL92) v3.5.1	carmeB0023
Carg06080	ClCG11G008080	Watermelon (Charleston Gray)	carwcgB0020
Carg06080	CSPI02G25010	Wild cucumber (PI 183967)	carcpiB0018
Carg06080	Cucsa.088270	Cucumber (Gy14) v1	carcgyB0016
Carg06080	CmaCh04G030070	Cucurbita maxima (Rimu)	carcmaB0033
Carg06080	CmaCh15G000380	Cucurbita maxima (Rimu)	carcmaB0030
Carg06080	CmoCh04G031270	Cucurbita moschata (Rifu)	carcmoB0033
Carg06080	CmoCh15G000370	Cucurbita moschata (Rifu)	carcmoB0031
Carg06080	Lsi03G004540	Bottle gourd (USVL1VR-Ls)	carlsiB017
Carg06080	Cp4.1LG13g11620	Cucurbita pepo (Zucchini)	carcpeB0031
Carg06080	Cp4.1LG01g26100	Cucurbita pepo (Zucchini)	carcpeB0034
Carg06080	CsGy2G024730	Cucumber (Gy14) v2	carcgybB0017
Carg06080	MELO3C008126.2	Melon (DHL92) v3.6.1	carmedB0024
Carg06080	CsaV3_2G033530	Cucumber (Chinese Long) v3	carcucB0018
Carg06080	Cla97C11G215440	Watermelon (97103) v2	carwmbB0017
Carg06080	Bhi04G002050	Wax gourd	carwgoB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06080	Carg22860	Silver-seed gourd	carcarB028

The following block(s) are covering this gene:

None