Cp4.1LG01g25180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g25180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Import inner membrane translocase subunit tim21, mitochondrial, putative
Location	Cp4.1LG01 : 18470753 .. 18477128 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCCCGAAACGCCCTCCCCGAACATAGAAATTCATCAGGGTTTAACGCCTCTCCTAGGGTTTCTCTGTACAGTTCAAATTCTTCTTCAGCTCTGAAAATCAATGGCGAACGGATTGATGAAGCTCACCACGATCGTCTCTCGTTCCTCTATTGTCCTCCGTCAATGGCATCAGTCCTCGTCGTTTTCTCGTCTCGGTGCTCATGAATATCTCAAGGTCAATCTGCATTTGAATTTGGGTCTTTACTTTACTCGACTAGTTCGGATTATTGAGTACTTTTCCGATCGGTGAATGCAATTGCTTTTGGTTCGTTTGAGATCTTAATTTACCTAAGCTGCACAAGATTGTGTTANTAAATTTGTTTGTTCATGAGTATGGAATGTGGAATTTGATGTCTTGAGTTTTTTCTATCTTCGCGTGGAAATCAGGCAGCTGAGGTAATTAGCAGAAGTGGGATGAATATTTCTAAAGGAGTTGCTGTACCTACCATTGACGGAGCAAAGAGGGCTTTACCAGATACGTATGTAACTGTAAGAGAGGTATGTTCTGGATATCAGTGGAGCGAATTAGTGGAAAGAAAAGGTGTAGGGAACCAAAGAACAATCTAATGATCAAAATGTGTGTCTTAGATGTTCCAGTATGCAACACGCAGTTCCCTGAAACAAAGAGCAGAAAAGTAATAATTAAAAGAACCTACTTTAATGGCTTCTGATCAGTTACAAATATATGCATCTCCTGTTACCTTTTACGGTTACATGATCAATATGTATCTTCTTTCTTTCAATATCAATTTCAATATGTAAACCTTTTGCCTTATATGTCTGTGCTATTAGGTAGTAAAATCTTTTCTGTTTGACAGTGTTTGAACCAACTCAAAGGCTCTTGGAATTTTAACCTTAGAATGAACTTAAGAAAGTTTGAAGTAGAGGGGTTATAAATCCCGTTTTGATCAACTTTTTTCAGCTCTTTTTCTTCCTAAAATGCTTGTCAAATTCGTTGGATAGGTAAATATTCTAATAACTAAACTAATAAGCCAAGGTGTTACTTCTATTTCATAAAGGAAAAAAAATGCAAAGTGTTCTGTTGGACAGCTTTTTTTTTTTTTTTTTGGAGCTTTTGTACAAATAAGATCGTACAAAGTAAAGCCTTCACAAGCTTTGAGTCCACCATCACGGAAGTGATTTTATTGCGAGGGTTGGCTAGAGAGGAATATGAGAAGGTTTCGAAGCATTTATAAGAAACCCTCAAGCATTTGGGATAATTTATCTTTTGGTGCTTCTCCTCAGAGCTCTTGTTTGAAACAACTTCCCTGCCGATATCAACCCTAATAGGAGCATTTCTTCGGAAACTCCCCAACTCTTTGTTTATTAAAAAAAGAAAAAGATCCTGCTCTACTTGACTTATTAGCTCTTCAAACATCTTGGAAAAGAATAGAAGAAAATATGTATTGAACTCTAAGATAGAAGTGGGTATTGCTCAAAGAACTTTTCTCTTTCAAATGATGATATTGCATTAATTACCAGCATTCTTAGCCAATGCAGAAGGTTCTCGAATTTGAGATTTCTAATTAAGATGTATAATTGATGCAGCTGCTTGGTCCACTGAAGTCAGGCGTTGCCAAACGATCTGCTGGGTACGTGCGCGATATACCGAAGGTGCAATAACTCCTTTATGGCATACTTTGATTTTTAATTGGCATTTTTTTTAGCATTCACTGAATGTCTGATTATATTATTCATTGACTTTGCAGGATACACTTGGAGCTACTGGTTGGTTTTATTTCCATTTATTTTTCTTGAACTTGGTTATTCTGCCATGTTTTTTGTTTTTTTGTTTTTTTATTTTACTGCAGGGGTGGGGGTGAGTTTTCAAAATGAGAACTCTTTTTAATTTTTTTGGATGATTGAACGGTTACTGGTGCAACTTAAGTCTATATCCTTCAAAATTGCTCCTGGACAGTGGGTCATATCTTGCTTAAAAAATTTCCTTCGAAAGATTGACTATTTAGTTTAAGTTTTCACATTGTATGCATGGATTTGACATATTTGATCTGGTTACTTTGATATCTCATATGAAGCTATTATGCATGGGCGATGAAAAACGGAGGAGTTTCAAGGGATTTTAGAATTGTCTAATTATGGTTATGGATTAACATGTGGAAAATGAGTTTCTTGGGGCTTGATGCTGAGAGAAATTAATTGAGTCCCCTGNGGGGGGGGGGGGGGGGGGGTCTGTCTCTTGCAATTAACTCTTCCATGTTATATATGTATATATATTTTTTTGTAGGTATAGCTGTTTTATCTAGACGGCAGGGTGCAAGGGGATCAATTGTCAAATTGTCACCACTAGCTGTCGCTAGGAGTTGTGATACAAATGCTGGAGTGCCGTGCTTCGCTAGATTTATGTCGTCAAAATCTTCAGAACAACGTGGGCAAACCGCATCTGAGGTTTGTGTTCAATTTGAGTTTCTTTAACATGTAATAGGGAGTCTAGATTTCAGGTTCATTAGTACTGAGTTTTAGTAGAAGGAACTTTGACTGGATTTAAATGTGGTGCTTGTGTCTCAAATTTATGCATCCTGAAATAATTATGAAGATGACAACTCGCAGTCCTTAACATCCATGTCAACTGAGAAAAAAAAATGATCATCTCTAATAAATCTTAGATCCAATTAAGCAAGTACATGGGAATAATTAGAATATCAACATTATTTGCAAGGAAAATTTAAGTTAGCCTGTCTACAATTTGTTGTTAAACATTGTTGAATGCATTTCTGTAATATATTTATATGAAGCCAGCTTCCATTAAGAGAGTTAAATAAACAACTAGAGAGGAGTGATACGATAAAGGAGGCAACACCAATAAAAAAAAATGTTACCAGAATTGACGTTTACTAGGTATCTCATTGAGGTGTTGGTGGTTAAAATTAAAGCTGACATGATGATATAAGTTTTAAATTTCTTCTCATTTATTTGCATTGGCCCGATATGGCTGCTGCTTTATCTTGATCACCTACGAGTTCATCAACCTGGTTTTTTTCCTTGATCTTAATATCAGAGAAAAAAGGAAATATCGACAGTGGAGGATCCATTTGATGCCCCCACATATAATATACCAGAGAAGCCTGTTACATTTGCAGAGGGAGCATCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCAGCTGCTGGCTATGCAGTTTTTAAGGAGCTTATATTTCAACCAAAAGAGTAAAAATCAACTTACAATTGATTACTATTGCGAAGTTTTGCTTATAATTATGACTTGTGCCTTGTGATTTCCTCTTAACTAGTGACTCTGATGTACTAATTCTTTTGTTTAGGTATAAGATCTTCGGCAAGGCTCTTAAAAGGATTCAAGATGACAGCCAGGTTAGTGAAATTAACCTTGACCTTTTGGCACACTTAAACACTCCAGGATAAACATGTCCATGAGAACAAATATACTAAATGAAACGAAAACAACCAAGGCAATTACATATGCAGAAAACCAAGCTAGAAATGACCGACCGAGAGAACAAAGAGAACCATTTTGAAGTTTCTGCGTTTTACTTGAATAAAATTAAGCATTTTGAAGTCTACTCAACAAATTCACCTGAGCCTTTATGTTTTATTAGATTAGTTTTTCTATCCTGCAGGTTAGGGTAAGAATTGGTTCCCCTATAACTGGTTATGGGCAAGAAACTAGGAATCGGGCTGCTCGCCAACGTATCCCTAATAGGGTGTGGACTGATGAAGATGGTGTTGAGCGAGTAGAGGTAATTTGTGTCTTAAAATATGATAAATTTTTACTGTTTTAGTAATGATAATTTGTTTTTGTAGAAGTTGCTAAATAATTCCCCTTTTACATTGTAAATTAACAAATCATTTTGTAGAGTTCATTTTCTTTATACCTTGCCAACTATATTCGCAGGTGAACTTTTATATTCGTGGACCCCATGGAGCTGGAAAAGTTTACACTGAGATGTTCAAGGATCAAGCGGATAAGCAGTGGAAGTTCACATATTTGATCGTCGAGGTGAAATCGCCTTCTCCCGCCCAATTGATCCTAGAATCTTATATGCCTGCCTGACCTTTCAGCATCCTAACCCGCTCTAGATTTTGTACTGAATTATACATTATTTAGAATTATCATCTCATGTTTATAGATTTCCTCCCTTCTCCCGCCCCATTAAATTTTTTGATACGATTAGGCCAATTTTTCTAGTTCGATATTTCGGATTACCTCCTTGCAAGAGAGTTCCAATAAGTACTCACTCATTCAACTTTCTTCTACTCGATACAAGTGAATCAGAAAGTTTTGCCCATAGACGATGCAGCCTCCATTTCGGTAACTCGTTATTGATTCTCTCTTGCTGCTAAATCTACCCTACCAAGGATAGATTTGTTCTTTCCATGCTGTGTGTATTTCTTTGTCCAGAAGTCCCAGATTTTCTCATGTTAGGCTCTCGCTAGAGTTGTAGTGAAACAACAAAGAATCAACTGGAAATTGAAGGTATGAGGCTTATTTATTTGTTTGCTTCTTCTTAGCTTGTTTGCATGCTTCGTTAAAAGGCTCAATTTGCGCCCCTCACCTTCATACATTTCATAAAGGCTTGTGCCAATAAATGGATGGCTGATGTTATTCAATACAAAGGATAAGAACTATAGCTCTTTGTTTGTTTGTTTGTTTTGGCCTGCTGATTGTTCTGTATTGTTCATGGGATGCATCAAGATTATTAACTCAATTTGTTTACAATTAATAATCTATGTTTGACTGAATTAAGCTACTTTATCTAAGCTGAGAATTGAAAGATTCACTAAATAATGTGCTTTTGGTCCATTAATAAGGTTTTTTCTCTGTTTTTGGGAGGATTTGCCAAGTTTGGGCACTTGAAAAGAAATTCAAATCTTGAAGTTACTAATCTAATATGTAATTGTGAATCACTTCAACTTAATTTTTTTTCATAATTATATAATAATACAAGTTGAGAATATTTGAAATTTTTAGTAAAAAAAATTAATTTATTCTCCCACTTTGGATTTTCAACCATTACAGTCCCATTTTAATATTTTAATGCATAATCTTCTATTTTTCATCTATTTTTGCCTACTTTTTTAAATATAGATTTGATGATATTTCAACACTAATAGCCATTTTGAAACCTGTACAGTTTTATTTATGTGATTTAATAGATGGTGTAAATTAATTCAAGCTAAATTCATACAATTATTAATTTTTTTTAATTAATGCAACCTAGAAATTTAGGAGTATAAATTGGCTTCCCAAATTTGAAAGAAGAAAACAAGATAAATATAAATATTTAATGGAAAAAGAAAAAGAGAGATGGCTAAAAAANATGGCTAAAAAAAAAAAAAAAAGTAGACAATTATTGATGTTTAATTGCAATAAAATAAAATAAGAAAATAAAACCCTCCACCAGGAACATGATGTCTTTTCGAACTTTTTTTTAATTCATCTCATTGCTGTATTTTTTTCAGTGATTTCGCTTTAAGCAACAAAATTGTAGCTATTTGGTTCTTTACGTTCGTGACAAACTTCACTCCATGATTACAAGAACCAAAGAGAACAGAACACTGAAAAAAGGAATTTATAGGCCTCCACTCATCTGTTCTAAAATGGCTTTCAGTTAATACAGCACCTGTTATCTATCAGATTTCATCTTCATTGATTCAAATTGGTGCATGACTATTACCGACGTTTGGTTTCTCGGGTTCGACTAATCGAACGATAAAATTCAAGTGGATAAGCTAGTGTAATGTGGAATTTAAGAAGGCTACAATTGTTCCCTAAGAAGATAAATGTATTGGGCTTGAAAAATAAGATGCTTTACAAGTTCATGAATGTAAGTACGTACCATCTTTTTAAGGCATTAATAAGGATGGTGATGGTGATGGTGATGGTGATGCAGGTGGGTTTTGGCTGTTCTGAGTGTTGTCTCTGCTCGAATCCTGAACTTGTCCTGCAAAATGCAAATTCCAAAGGATATCGTCTACTGAAGGTCTATCTGCTGCCTTGTCATGGAGACATCTTACACATATTTCCATCATCGTCTTTAGCGATTCATCCGAACACCCCTTGTGTACTGCTGGATCTGCGATGCTCTTTCGAGCGATATCGTCCGTTTTTAGGCTTACCTGTAACTGAGAATACGAGCAAAACCAAAGCCTCAAGTTCAGCTTCAGACTTGTCAACCGTGATGATGATTGTGAGAGATGCAATGACGAGAAAATGTACTTACAAGATCTCTTGAAACATGAACTTCGTTTTGGGATGTGATCTGTCTTCCCAAAATGATTTCCAGTAAAATCACTCCTATGTCATACACATCATCCTTATCTGCGTGAT

mRNA sequence

TCTTCCCGAAACGCCCTCCCCGAACATAGAAATTCATCAGGGTTTAACGCCTCTCCTAGGGTTTCTCTGTACAGTTCAAATTCTTCTTCAGCTCTGAAAATCAATGGCGAACGGATTGATGAAGCTCACCACGATCGTCTCTCGTTCCTCTATTGTCCTCCGTCAATGGCATCAGTCCTCGTCGTTTTCTCGTCTCGGTGCTCATGAATATCTCAAGGCAGCTGAGGTAATTAGCAGAAGTGGGATGAATATTTCTAAAGGAGTTGCTGTACCTACCATTGACGGAGCAAAGAGGGCTTTACCAGATACGTATGTAACTGTAAGAGAGCTGCTTGGTCCACTGAAGTCAGGCGTTGCCAAACGATCTGCTGGGTACGTGCGCGATATACCGAAGGATACACTTGGAGCTACTGGTATAGCTGTTTTATCTAGACGGCAGGGTGCAAGGGGATCAATTGTCAAATTGTCACCACTAGCTGTCGCTAGGAGTTGTGATACAAATGCTGGAGTGCCGTGCTTCGCTAGATTTATGTCGTCAAAATCTTCAGAACAACGTGGGCAAACCGCATCTGAGAGAAAAAAGGAAATATCGACAGTGGAGGATCCATTTGATGCCCCCACATATAATATACCAGAGAAGCCTGTTACATTTGCAGAGGGAGCATCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCAGCTGCTGGCTATGCAGTTTTTAAGGAGCTTATATTTCAACCAAAAGAGTATAAGATCTTCGGCAAGGCTCTTAAAAGGATTCAAGATGACAGCCAGGTTAGGGTAAGAATTGGTTCCCCTATAACTGGTTATGGGCAAGAAACTAGGAATCGGGCTGCTCGCCAACGTATCCCTAATAGGGTGTGGACTGATGAAGATGGTGTTGAGCGAGTAGAGGTGAACTTTTATATTCGTGGACCCCATGGAGCTGGAAAAGTTTACACTGAGATGTTCAAGGATCAAGCGGATAAGCAGTGGAAGTTCACATATTTGATCGTCGAGGTGAAATCGCCTTCTCCCGCCCAATTGATCCTAGAATCTTATATGCCTGCCTGACCTTTCAGCATCCTAACCCGCTCTAGATTTTGTACTGAATTATACATTATTTAGAATTATCATCTCATGTTTATAGATTTCCTCCCTTCTCCCGCCCCATTAAATTTTTTGATACGATTAGGCCAATTTTTCTAGTTCGATATTTCGGATTACCTCCTTGCAAGAGAGTTCCAATAAGTACTCACTCATTCAACTTTCTTCTACTCGATACAAGTGAATCAGAAAGTTTTGCCCATAGACGATGCAGCCTCCATTTCGGTAACTCGTTATTGATTCTCTCTTGCTGCTAAATCTACCCTACCAAGGATAGATTTGTTCTTTCCATGCTGTGTGTATTTCTTTGTCCAGAAGTCCCAGATTTTCTCATGTTAGGCTCTCGCTAGAGTTGTAGTGAAACAACAAAGAATCAACTGGAAATTGAAGGTGGGTTTTGGCTGTTCTGAGTGTTGTCTCTGCTCGAATCCTGAACTTGTCCTGCAAAATGCAAATTCCAAAGGATATCGTCTACTGAAGGTCTATCTGCTGCCTTGTCATGGAGACATCTTACACATATTTCCATCATCGTCTTTAGCGATTCATCCGAACACCCCTTGTGTACTGCTGGATCTGCGATGCTCTTTCGAGCGATATCGTCCGTTTTTAGGCTTACCTGTAACTGAGAATACGAGCAAAACCAAAGCCTCAAGTTCAGCTTCAGACTTGTCAACCGTGATGATGATTGTGAGAGATGCAATGACGAGAAAATGTACTTACAAGATCTCTTGAAACATGAACTTCGTTTTGGGATGTGATCTGTCTTCCCAAAATGATTTCCAGTAAAATCACTCCTATGTCATACACATCATCCTTATCTGCGTGAT

Coding sequence (CDS)

ATGGCGAACGGATTGATGAAGCTCACCACGATCGTCTCTCGTTCCTCTATTGTCCTCCGTCAATGGCATCAGTCCTCGTCGTTTTCTCGTCTCGGTGCTCATGAATATCTCAAGGCAGCTGAGGTAATTAGCAGAAGTGGGATGAATATTTCTAAAGGAGTTGCTGTACCTACCATTGACGGAGCAAAGAGGGCTTTACCAGATACGTATGTAACTGTAAGAGAGCTGCTTGGTCCACTGAAGTCAGGCGTTGCCAAACGATCTGCTGGGTACGTGCGCGATATACCGAAGGATACACTTGGAGCTACTGGTATAGCTGTTTTATCTAGACGGCAGGGTGCAAGGGGATCAATTGTCAAATTGTCACCACTAGCTGTCGCTAGGAGTTGTGATACAAATGCTGGAGTGCCGTGCTTCGCTAGATTTATGTCGTCAAAATCTTCAGAACAACGTGGGCAAACCGCATCTGAGAGAAAAAAGGAAATATCGACAGTGGAGGATCCATTTGATGCCCCCACATATAATATACCAGAGAAGCCTGTTACATTTGCAGAGGGAGCATCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCAGCTGCTGGCTATGCAGTTTTTAAGGAGCTTATATTTCAACCAAAAGAGTATAAGATCTTCGGCAAGGCTCTTAAAAGGATTCAAGATGACAGCCAGGTTAGGGTAAGAATTGGTTCCCCTATAACTGGTTATGGGCAAGAAACTAGGAATCGGGCTGCTCGCCAACGTATCCCTAATAGGGTGTGGACTGATGAAGATGGTGTTGAGCGAGTAGAGGTGAACTTTTATATTCGTGGACCCCATGGAGCTGGAAAAGTTTACACTGAGATGTTCAAGGATCAAGCGGATAAGCAGTGGAAGTTCACATATTTGATCGTCGAGGTGAAATCGCCTTCTCCCGCCCAATTGATCCTAGAATCTTATATGCCTGCCTGA

Protein sequence

MANGLMKLTTIVSRSSIVLRQWHQSSSFSRLGAHEYLKAAEVISRSGMNISKGVAVPTIDGAKRALPDTYVTVRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIVKLSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVKSPSPAQLILESYMPA

Homology

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BLAST of Cp4.1LG01g25180 vs. Swiss-Prot
Match: TIM21_ARATH (Probable mitochondrial import inner membrane translocase subunit TIM21 OS=Arabidopsis thaliana GN=TIM21 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.2e-82
Identity = 162/246 (65.85%), Postives = 194/246 (78.86%), Query Frame = 1


Query: 82  SGVAKRSAGYVRD--IPKDTLGATGIAVLSRRQGARGSIVKLSPLAVARSCDTNAGVPCF 141
           SG+ K S     +  + KD+ GA G+  L R +  + SI        AR  + N+    F
Sbjct: 33  SGIPKSSKRVFSNSFLSKDSTGANGL--LFRFRNPQASIC-----TEARPKNINSSY--F 92

Query: 142 ARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGV 201
            R  +S++S++ G   ++ KKE++TVEDPFD+PTY+IPEKPVTF EGASYS +ILAGLGV
Sbjct: 93  TRSFASRTSKEPGNQQNKAKKEVTTVEDPFDSPTYHIPEKPVTFTEGASYSLVILAGLGV 152

Query: 202 AAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIP 261
           A AAGY VFKELIFQPKEYK+F KALKRIQDD QVRVRIGSPI GYGQETRNRAARQRIP
Sbjct: 153 AGAAGYGVFKELIFQPKEYKVFDKALKRIQDDGQVRVRIGSPIKGYGQETRNRAARQRIP 212

Query: 262 NRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVKSPSPAQLIL 321
           NRV+TDEDGVE VEVNFYIRGP GAGKVYTEMFKD+A+K+WK+TYLIVE+ +PSPA+L+L
Sbjct: 213 NRVFTDEDGVEHVEVNFYIRGPQGAGKVYTEMFKDKAEKEWKYTYLIVEILTPSPAKLML 269

Query: 322 ESYMPA 326
           ESY+PA
Sbjct: 273 ESYLPA 269

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BLAST of Cp4.1LG01g25180 vs. TrEMBL
Match: A0A0A0K9E8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046410 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 8.1e-141
Identity = 269/326 (82.52%), Postives = 283/326 (86.81%), Query Frame = 1


Query: 1   MANGLMKLTTIVSRSSIVLRQWHQSSSFSRLGAHEYLKAAEVISRSGMNISKGVAVPTID 60
           MANGLMKLT  +S SS++ RQWH SS FSRLG+HE+L+ AEV+  SGMN SK V V  ID
Sbjct: 1   MANGLMKLTRFISPSSLLPRQWHHSS-FSRLGSHEFLQTAEVMRSSGMNASKRVTVNIID 60

Query: 61  GAKRALPDTYVT-VRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIV 120
            AK  LPDTY T VRELL PLKSG++K+SA YV DIPK  LG  G+ VLSR Q AR S+V
Sbjct: 61  EAKSGLPDTYATSVRELLAPLKSGISKQSAVYVCDIPKAALG--GMPVLSRWQDARASVV 120

Query: 121 KLSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEK 180
             S L V   CDT+A  PCFARFMSSKSSE+RGQT SE KKEISTVEDPFDAPTYNIPEK
Sbjct: 121 NFSTLGVTSRCDTSARGPCFARFMSSKSSEKRGQTESESKKEISTVEDPFDAPTYNIPEK 180

Query: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIG 240
           PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDDSQVRVRIG
Sbjct: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIG 240

Query: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQ 300
           SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQ DKQ
Sbjct: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQ 300

Query: 301 WKFTYLIVEVKSPSPAQLILESYMPA 326
           WKFTYLIVEVKSPSPAQLILESYMPA
Sbjct: 301 WKFTYLIVEVKSPSPAQLILESYMPA 323

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BLAST of Cp4.1LG01g25180 vs. TrEMBL
Match: D7U401_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0033g01350 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.0e-90
Identity = 178/255 (69.80%), Postives = 200/255 (78.43%), Query Frame = 1


Query: 72  TVRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIVKL-SPLAVARSC 131
           T   L   +KS   ++SA     I KD  G  G +VLS R   R  IV   SP     + 
Sbjct: 60  TTNRLQVLIKSRNLRQSAVNANCIIKDVRGVDGTSVLSARWQTRERIVGFCSPYRPIETH 119

Query: 132 DTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYS 191
             +  VPCFAR  +S +S+   +  SE +K+ISTVEDPFDAPTYNIPEKPVTFAEGASYS
Sbjct: 120 GKSTVVPCFARSCASTASKSPEEKQSETRKDISTVEDPFDAPTYNIPEKPVTFAEGASYS 179

Query: 192 FIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETR 251
            IIL GLG+AAAAGYAVFKELIF+PKEYKIFGKALKR+Q+D QVRVRIGSPITGYGQE+R
Sbjct: 180 VIILVGLGIAAAAGYAVFKELIFEPKEYKIFGKALKRVQEDGQVRVRIGSPITGYGQESR 239

Query: 252 NRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVK 311
           NRAARQRI NR+WTDEDGVE VEVNFYIRGPHGAGKVYTEMFKD+ DKQWKFTYLI E+K
Sbjct: 240 NRAARQRISNRIWTDEDGVEHVEVNFYIRGPHGAGKVYTEMFKDKVDKQWKFTYLIAEIK 299

Query: 312 SPSPAQLILESYMPA 326
           SPSPAQL+LESY+PA
Sbjct: 300 SPSPAQLMLESYVPA 314

[Close]

BLAST of Cp4.1LG01g25180 vs. TrEMBL
Match: M5VXM2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009280mg PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.2e-88
Identity = 169/252 (67.06%), Postives = 202/252 (80.16%), Query Frame = 1


Query: 75  ELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIVKLSP-LAVARSCDTN 134
           +LL  LKSG A +S      + +   GA GI VL  R+ AR  +    P     R+   +
Sbjct: 42  QLLAVLKSGCASQSTASANHLTRGIAGADGIPVLYGRKCARELMSTSWPQFQPTRNYIAS 101

Query: 135 AGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFII 194
           + +P F R +SSK+S Q  Q+ SE KK++STVEDPFDAPTYNIPEKPVTF EGASYS +I
Sbjct: 102 SSIPQFCRSISSKASRQPRQSPSENKKDLSTVEDPFDAPTYNIPEKPVTFVEGASYSVVI 161

Query: 195 LAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETRNRA 254
           LAGLG+AAAAGYAVFKELIF+PKEYKIF KALKR+QDD+QVR+R+G PITGYGQE+RNRA
Sbjct: 162 LAGLGIAAAAGYAVFKELIFEPKEYKIFNKALKRVQDDAQVRMRVGYPITGYGQESRNRA 221

Query: 255 ARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVKSPS 314
           ARQRIPNR+W DE+GVE VEVNFYIRGPHGAGKV+ EMF DQADKQWK+TYLIV++++PS
Sbjct: 222 ARQRIPNRIWHDEEGVEHVEVNFYIRGPHGAGKVFAEMFNDQADKQWKYTYLIVQIQAPS 281

Query: 315 PAQLILESYMPA 326
           PAQLILESY+P+
Sbjct: 282 PAQLILESYLPS 293

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BLAST of Cp4.1LG01g25180 vs. TrEMBL
Match: A0A059CG57_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01510 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.3e-85
Identity = 164/244 (67.21%), Postives = 197/244 (80.74%), Query Frame = 1


Query: 87  RSAGYVRDIPKDTLGATGI----AVLSRRQGARGSIVKLSPLAVARS-CDTNAGVPCFAR 146
           RS  +   + K+ LGA G+     VL  R+G     ++LSPL +  +  + ++ +   +R
Sbjct: 146 RSTSHAEPMTKEILGAKGLHVPLRVLHNRKG-----IRLSPLQLLYTGANVDSRIYSLSR 205

Query: 147 FMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAA 206
             +S+SSE++G+TASE KK++ST+EDPFDAPTYNIPEKPVTF EGASYS IILAGLGVAA
Sbjct: 206 SFASRSSEKKGETASETKKDVSTIEDPFDAPTYNIPEKPVTFVEGASYSLIILAGLGVAA 265

Query: 207 AAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIPNR 266
           AA Y VF ELIFQPKEYKIF  ALKRIQDDSQVR+RIGSPITGYGQE+RNRAARQRIP+R
Sbjct: 266 AAAYGVFNELIFQPKEYKIFNMALKRIQDDSQVRIRIGSPITGYGQESRNRAARQRIPHR 325

Query: 267 VWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVKSPSPAQLILES 326
            WTDEDGVE +EVNFYIRGPHGAGKV+  MFKD+ +KQWKFT LIV++ SPSPAQL+LES
Sbjct: 326 AWTDEDGVEHIEVNFYIRGPHGAGKVFCRMFKDKVEKQWKFTSLIVQIMSPSPAQLLLES 384

[Close]

BLAST of Cp4.1LG01g25180 vs. TrEMBL
Match: A0A067JY77_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14608 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.4e-84
Identity = 170/249 (68.27%), Postives = 194/249 (77.91%), Query Frame = 1


Query: 81  KSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIV----KLSPLAVARSCDTNAGV 140
           +SG   +S        K+ L ATG AVL      +  +V    K  PL +  +   N   
Sbjct: 61  ESGYVSQSTSAASHTSKEILQATGKAVLCGGCHGKECLVGLGSKFPPLKMHGASTIN--- 120

Query: 141 PCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAG 200
           P FAR  +SK+S+Q G+  SE +KE+STVEDPFDAPTYNIPEKPVTF EGASYS IILAG
Sbjct: 121 PSFARSFASKASKQTGKKESETRKEVSTVEDPFDAPTYNIPEKPVTFVEGASYSVIILAG 180

Query: 201 LGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQ 260
           LGVAAAAGYAVFKELIF+PKEYKIF KALKR+QDD+QVRVRIGSPITGYGQE+RNRAARQ
Sbjct: 181 LGVAAAAGYAVFKELIFEPKEYKIFNKALKRVQDDAQVRVRIGSPITGYGQESRNRAARQ 240

Query: 261 RIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVKSPSPAQ 320
           RIPN+V+TDEDGVE V VNFYIRGPHGAGKV  EMFKD+ DKQWK+TYLIV++  PS +Q
Sbjct: 241 RIPNKVYTDEDGVEHVLVNFYIRGPHGAGKVSAEMFKDKVDKQWKYTYLIVQIMQPSQSQ 300

Query: 321 LILESYMPA 326
           LILESYMPA
Sbjct: 301 LILESYMPA 306

[Close]

BLAST of Cp4.1LG01g25180 vs. TAIR10
Match: AT4G00026.1 (AT4G00026.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-83
Identity = 162/246 (65.85%), Postives = 194/246 (78.86%), Query Frame = 1


Query: 82  SGVAKRSAGYVRD--IPKDTLGATGIAVLSRRQGARGSIVKLSPLAVARSCDTNAGVPCF 141
           SG+ K S     +  + KD+ GA G+  L R +  + SI        AR  + N+    F
Sbjct: 33  SGIPKSSKRVFSNSFLSKDSTGANGL--LFRFRNPQASIC-----TEARPKNINSSY--F 92

Query: 142 ARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGV 201
            R  +S++S++ G   ++ KKE++TVEDPFD+PTY+IPEKPVTF EGASYS +ILAGLGV
Sbjct: 93  TRSFASRTSKEPGNQQNKAKKEVTTVEDPFDSPTYHIPEKPVTFTEGASYSLVILAGLGV 152

Query: 202 AAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIP 261
           A AAGY VFKELIFQPKEYK+F KALKRIQDD QVRVRIGSPI GYGQETRNRAARQRIP
Sbjct: 153 AGAAGYGVFKELIFQPKEYKVFDKALKRIQDDGQVRVRIGSPIKGYGQETRNRAARQRIP 212

Query: 262 NRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVKSPSPAQLIL 321
           NRV+TDEDGVE VEVNFYIRGP GAGKVYTEMFKD+A+K+WK+TYLIVE+ +PSPA+L+L
Sbjct: 213 NRVFTDEDGVEHVEVNFYIRGPQGAGKVYTEMFKDKAEKEWKYTYLIVEILTPSPAKLML 269

Query: 322 ESYMPA 326
           ESY+PA
Sbjct: 273 ESYLPA 269

[Close]

BLAST of Cp4.1LG01g25180 vs. TAIR10
Match: AT2G20420.1 (AT2G20420.1 ATP citrate lyase (ACL) family protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 36/122 (29.51%), Postives = 62/122 (50.82%), Query Frame = 1


Query: 11  IVSRSSIVLRQWHQSSSFSRLGAHEYLKAAEVISRSGMNISKGVAVPTIDGAKRALPDTY 70
           +VSRS  +  +W Q+    RL  HEY + AE++ + G+N+ KGVA  +++  K+A+ D +
Sbjct: 8   LVSRSLSISGKW-QNQQLRRLNIHEY-QGAELMGKYGVNVPKGVAASSLEEVKKAIQDVF 67

Query: 71  VTVREL------------LGPLKSGVAKRSAGYVRDIPKDTLG-ATGIAVLSRRQGARGS 120
               EL            LG  KSG+        RD  ++  G   G  +++++ G +G 
Sbjct: 68  PNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGK 127

[Close]

BLAST of Cp4.1LG01g25180 vs. NCBI nr
Match: gi|659113547|ref|XP_008456633.1| (PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM21 isoform X1 [Cucumis melo])

HSP 1 Score: 514.2 bits (1323), Expect = 1.6e-142
Identity = 266/326 (81.60%), Postives = 283/326 (86.81%), Query Frame = 1


Query: 1   MANGLMKLTTIVSRSSIVLRQWHQSSSFSRLGAHEYLKAAEVISRSGMNISKGVAVPTID 60
           MANGL+K T  +S SS++ RQWH SS+FSRLG+HE+L+ AEV+  SG N SK VAV  ID
Sbjct: 1   MANGLLKFTHFISPSSLLPRQWHHSSTFSRLGSHEFLQTAEVMRSSGTNASKRVAVNIID 60

Query: 61  GAKRALPDTYV-TVRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIV 120
            AKR LPDTY  +VRELLGPLK G++K+SA YV DIPK  +G  GI VLSR Q  R S+V
Sbjct: 61  EAKRGLPDTYATSVRELLGPLKFGISKQSAVYVCDIPKAAIGGNGIPVLSRWQNVRASVV 120

Query: 121 KLSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEK 180
             S L V   CDT+A  PCFARFMSSKSSE+RGQT SE KKEISTVEDPFDAPTYNIPEK
Sbjct: 121 NFSTLGVTSRCDTSARGPCFARFMSSKSSEKRGQTESESKKEISTVEDPFDAPTYNIPEK 180

Query: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIG 240
           PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDDSQVRVRIG
Sbjct: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIG 240

Query: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQ 300
           SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQ DKQ
Sbjct: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQ 300

Query: 301 WKFTYLIVEVKSPSPAQLILESYMPA 326
           WKFTYLIVEVKSPSPAQLILESYMPA
Sbjct: 301 WKFTYLIVEVKSPSPAQLILESYMPA 326

[Close]

BLAST of Cp4.1LG01g25180 vs. NCBI nr
Match: gi|659113549|ref|XP_008456634.1| (PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM21 isoform X2 [Cucumis melo])

HSP 1 Score: 510.8 bits (1314), Expect = 1.8e-141
Identity = 267/326 (81.90%), Postives = 283/326 (86.81%), Query Frame = 1


Query: 1   MANGLMKLTTIVSRSSIVLRQWHQSSSFSRLGAHEYLKAAEVISRSGMNISKGVAVPTID 60
           MANGL+K T  +S SS++ RQWH SS+FSRLG+HE+L+ AEV+  SG N SK VAV  ID
Sbjct: 1   MANGLLKFTHFISPSSLLPRQWHHSSTFSRLGSHEFLQTAEVMRSSGTNASKRVAVNIID 60

Query: 61  GAKRALPDTYVT-VRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIV 120
            AKR LPDTY T VRELLGPLK G++K+SA YV DIPK  +G  GI VLSR Q  R S+V
Sbjct: 61  EAKRGLPDTYATSVRELLGPLKFGISKQSAVYVCDIPKAAIG--GIPVLSRWQNVRASVV 120

Query: 121 KLSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEK 180
             S L V   CDT+A  PCFARFMSSKSSE+RGQT SE KKEISTVEDPFDAPTYNIPEK
Sbjct: 121 NFSTLGVTSRCDTSARGPCFARFMSSKSSEKRGQTESESKKEISTVEDPFDAPTYNIPEK 180

Query: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIG 240
           PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDDSQVRVRIG
Sbjct: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIG 240

Query: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQ 300
           SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQ DKQ
Sbjct: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQ 300

Query: 301 WKFTYLIVEVKSPSPAQLILESYMPA 326
           WKFTYLIVEVKSPSPAQLILESYMPA
Sbjct: 301 WKFTYLIVEVKSPSPAQLILESYMPA 324

[Close]

BLAST of Cp4.1LG01g25180 vs. NCBI nr
Match: gi|449446321|ref|XP_004140920.1| (PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM21 [Cucumis sativus])

HSP 1 Score: 508.1 bits (1307), Expect = 1.2e-140
Identity = 269/326 (82.52%), Postives = 283/326 (86.81%), Query Frame = 1


Query: 1   MANGLMKLTTIVSRSSIVLRQWHQSSSFSRLGAHEYLKAAEVISRSGMNISKGVAVPTID 60
           MANGLMKLT  +S SS++ RQWH SS FSRLG+HE+L+ AEV+  SGMN SK V V  ID
Sbjct: 1   MANGLMKLTRFISPSSLLPRQWHHSS-FSRLGSHEFLQTAEVMRSSGMNASKRVTVNIID 60

Query: 61  GAKRALPDTYVT-VRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIV 120
            AK  LPDTY T VRELL PLKSG++K+SA YV DIPK  LG  G+ VLSR Q AR S+V
Sbjct: 61  EAKSGLPDTYATSVRELLAPLKSGISKQSAVYVCDIPKAALG--GMPVLSRWQDARASVV 120

Query: 121 KLSPLAVARSCDTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEK 180
             S L V   CDT+A  PCFARFMSSKSSE+RGQT SE KKEISTVEDPFDAPTYNIPEK
Sbjct: 121 NFSTLGVTSRCDTSARGPCFARFMSSKSSEKRGQTESESKKEISTVEDPFDAPTYNIPEK 180

Query: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIG 240
           PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIF KALKRIQDDSQVRVRIG
Sbjct: 181 PVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIG 240

Query: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQ 300
           SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQ DKQ
Sbjct: 241 SPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQ 300

Query: 301 WKFTYLIVEVKSPSPAQLILESYMPA 326
           WKFTYLIVEVKSPSPAQLILESYMPA
Sbjct: 301 WKFTYLIVEVKSPSPAQLILESYMPA 323

[Close]

BLAST of Cp4.1LG01g25180 vs. NCBI nr
Match: gi|225427488|ref|XP_002263208.1| (PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM21 [Vitis vinifera])

HSP 1 Score: 339.3 bits (869), Expect = 7.2e-90
Identity = 178/255 (69.80%), Postives = 200/255 (78.43%), Query Frame = 1


Query: 72  TVRELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIVKL-SPLAVARSC 131
           T   L   +KS   ++SA     I KD  G  G +VLS R   R  IV   SP     + 
Sbjct: 60  TTNRLQVLIKSRNLRQSAVNANCIIKDVRGVDGTSVLSARWQTRERIVGFCSPYRPIETH 119

Query: 132 DTNAGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYS 191
             +  VPCFAR  +S +S+   +  SE +K+ISTVEDPFDAPTYNIPEKPVTFAEGASYS
Sbjct: 120 GKSTVVPCFARSCASTASKSPEEKQSETRKDISTVEDPFDAPTYNIPEKPVTFAEGASYS 179

Query: 192 FIILAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETR 251
            IIL GLG+AAAAGYAVFKELIF+PKEYKIFGKALKR+Q+D QVRVRIGSPITGYGQE+R
Sbjct: 180 VIILVGLGIAAAAGYAVFKELIFEPKEYKIFGKALKRVQEDGQVRVRIGSPITGYGQESR 239

Query: 252 NRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVK 311
           NRAARQRI NR+WTDEDGVE VEVNFYIRGPHGAGKVYTEMFKD+ DKQWKFTYLI E+K
Sbjct: 240 NRAARQRISNRIWTDEDGVEHVEVNFYIRGPHGAGKVYTEMFKDKVDKQWKFTYLIAEIK 299

Query: 312 SPSPAQLILESYMPA 326
           SPSPAQL+LESY+PA
Sbjct: 300 SPSPAQLMLESYVPA 314

[Close]

BLAST of Cp4.1LG01g25180 vs. NCBI nr
Match: gi|595793511|ref|XP_007200504.1| (hypothetical protein PRUPE_ppa009280mg [Prunus persica])

HSP 1 Score: 334.7 bits (857), Expect = 1.8e-88
Identity = 169/252 (67.06%), Postives = 202/252 (80.16%), Query Frame = 1


Query: 75  ELLGPLKSGVAKRSAGYVRDIPKDTLGATGIAVLSRRQGARGSIVKLSP-LAVARSCDTN 134
           +LL  LKSG A +S      + +   GA GI VL  R+ AR  +    P     R+   +
Sbjct: 42  QLLAVLKSGCASQSTASANHLTRGIAGADGIPVLYGRKCARELMSTSWPQFQPTRNYIAS 101

Query: 135 AGVPCFARFMSSKSSEQRGQTASERKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFII 194
           + +P F R +SSK+S Q  Q+ SE KK++STVEDPFDAPTYNIPEKPVTF EGASYS +I
Sbjct: 102 SSIPQFCRSISSKASRQPRQSPSENKKDLSTVEDPFDAPTYNIPEKPVTFVEGASYSVVI 161

Query: 195 LAGLGVAAAAGYAVFKELIFQPKEYKIFGKALKRIQDDSQVRVRIGSPITGYGQETRNRA 254
           LAGLG+AAAAGYAVFKELIF+PKEYKIF KALKR+QDD+QVR+R+G PITGYGQE+RNRA
Sbjct: 162 LAGLGIAAAAGYAVFKELIFEPKEYKIFNKALKRVQDDAQVRMRVGYPITGYGQESRNRA 221

Query: 255 ARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQADKQWKFTYLIVEVKSPS 314
           ARQRIPNR+W DE+GVE VEVNFYIRGPHGAGKV+ EMF DQADKQWK+TYLIV++++PS
Sbjct: 222 ARQRIPNRIWHDEEGVEHVEVNFYIRGPHGAGKVFAEMFNDQADKQWKYTYLIVQIQAPS 281

Query: 315 PAQLILESYMPA 326
           PAQLILESY+P+
Sbjct: 282 PAQLILESYLPS 293

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIM21_ARATH	3.2e-82	65.85	Probable mitochondrial import inner membrane translocase subunit TIM21 OS=Arabid...	[more]

BLAST of Cp4.1LG01g25180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9E8_CUCSA	8.1e-141	82.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046410 PE=4 SV=1	[more]
D7U401_VITVI	5.0e-90	69.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0033g01350 PE=4 SV=...	[more]
M5VXM2_PRUPE	1.2e-88	67.06	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009280mg PE=4 SV=1	[more]
A0A059CG57_EUCGR	6.3e-85	67.21	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01510 PE=4 SV=1	[more]
A0A067JY77_JATCU	2.4e-84	68.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14608 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g25180 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00026.1	1.8e-83	65.85	FUNCTIONS IN: molecular_function unknown	[more]
AT2G20420.1	2.4e-06	29.51	ATP citrate lyase (ACL) family protein	[more]

BLAST of Cp4.1LG01g25180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113547\|ref\|XP_008456633.1\|	1.6e-142	81.60	PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM2...	[more]
gi\|659113549\|ref\|XP_008456634.1\|	1.8e-141	81.90	PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM2...	[more]
gi\|449446321\|ref\|XP_004140920.1\|	1.2e-140	82.52	PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM2...	[more]
gi\|225427488\|ref\|XP_002263208.1\|	7.2e-90	69.80	PREDICTED: probable mitochondrial import inner membrane translocase subunit TIM2...	[more]
gi\|595793511\|ref\|XP_007200504.1\|	1.8e-88	67.06	hypothetical protein PRUPE_ppa009280mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0030150	protein import into mitochondrial matrix

Vocabulary: **Cellular Component**
Term	Definition
GO:0005744	mitochondrial inner membrane presequence translocase complex

Vocabulary: **INTERPRO**
Term	Definition
IPR013261	Tim21

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0090351	seedling development
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g25180.1	Cp4.1LG01g25180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013261	Mitochondrial import inner membrane translocase subunit Tim21	PANTHER	PTHR13032	FAMILY NOT NAMED	coord: 136..325 score: 9.0
IPR013261	Mitochondrial import inner membrane translocase subunit Tim21	PFAM	PF08294	TIM21	coord: 185..311 score: 7.6
None	No IPR available	PANTHER	PTHR13032:SF6	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM21	coord: 136..325 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g25180	Cucsa.364430	Cucumber (Gy14) v1	cgycpeB0961
Cp4.1LG01g25180	CmaCh15G005390	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g25180	CmaCh04G025000	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g25180	CmoCh04G026140	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g25180	CmoCh15G005470	Cucurbita moschata (Rifu)	cmocpeB280
Cp4.1LG01g25180	Cla013672	Watermelon (97103) v1	cpewmB395
Cp4.1LG01g25180	Csa6G046410	Cucumber (Chinese Long) v2	cpecuB459
Cp4.1LG01g25180	MELO3C019920	Melon (DHL92) v3.5.1	cpemeB396
Cp4.1LG01g25180	ClCG08G008500	Watermelon (Charleston Gray)	cpewcgB417
Cp4.1LG01g25180	CSPI06G04180	Wild cucumber (PI 183967)	cpecpiB460
Cp4.1LG01g25180	Lsi08G006250	Bottle gourd (USVL1VR-Ls)	cpelsiB382
Cp4.1LG01g25180	MELO3C019920.2	Melon (DHL92) v3.6.1	cpemedB460
Cp4.1LG01g25180	CsaV3_6G004490	Cucumber (Chinese Long) v3	cpecucB0568
Cp4.1LG01g25180	Bhi04G001295	Wax gourd	cpewgoB0526
Cp4.1LG01g25180	CsGy6G004150	Cucumber (Gy14) v2	cgybcpeB797
Cp4.1LG01g25180	Carg01659	Silver-seed gourd	carcpeB1158
Cp4.1LG01g25180	Carg15841	Silver-seed gourd	carcpeB0096

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g25180	Cp4.1LG13g10930	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g25180	Silver-seed gourd	carcpeB1176
Cp4.1LG01g25180	Wax gourd	cpewgoB0560
Cp4.1LG01g25180	Cucumber (Gy14) v2	cgybcpeB635