Cp4.1LG01g22120 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g22120
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCycloidea-like protein group 1A
LocationCp4.1LG01 : 20417030 .. 20419119 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCTTCCACCAACAATCTCCACCTTTTCCCTGTTCAACACTACTTCGTCCCATCTTCTTCCTCCTCCTCCTCCTCTTACCACCAGCTGGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGGCCGGCGGTGGCGTGTCCTGCGAACAACGCGTTGGTCCTGCAAGATCTGCAAAACCCATTTGTTGGAGTGGGTGAAGAAGGAAGGATGAAGAATGAGGAAGAAGGGCAGTGTTATTCTTGTGGTGTGAACCAAAAGAGCAGAATGAAGAAAGATCGGCATAGCAAGATTTACACAGCTCAGGGTTTGAGAGACAGGAGAGTTAGATTATCCATTGAGATTTCAAGAAAGTTCTTTGATCTTCAAGACATGTTGGGTTATGACAAAGCTAGCAAAACCCTAGACTGGCTGCTCAACAACTCAAGAAAAGCTATTAAGGAGTTGACAAACTCAAACAACAACAACAGCAACAACAACAACAACTTGTATAACTTTGATTCTGAATTTGAGGCTCACAAAACAACATTGCCTAAATGTTGTAAGAAAAATGTTGGATTCCATGATGTTTTGGCCAAGGAATCTAGGGCAAAGGCAAGAGCAAGAGCTAGGGAAAGAACAAAGGAGAAAATCATGAGTAAATCCCAACAAGCTTTACCTGAGATTTTCAGCCACCAATTCCGCTCTCCTCCTCCTCCTCCTCCTCCGCCGCCACCGCCTGCTTCGTCGTCGTCTTCTTCTTCCATACCCGTCGTTCAAAAATCTGCAGCGAGCTCGTTGGATCAAGAAAACAACATCATAGGAATCATGTGGAAGCCATCTCCTATGATCACAAAAGGAGATATTTATTACAATAATTGCAACAATTTCTATTTTCCTTCCAATCTGCCTCCCAATTGGGACATCAATGTTGACTCTTTTGCCAGACCACAATCTGGGTTTTGCTCCATTGCCAACATGGATTCTCTCNTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTAATTTTTGAAGAACATATAGATCATTGTTGAGGTGCAATTTGCAGAATTTCAAGTGTGTGCGAAGCCATGGGATAGCTGCAGCAACAACCAACACCTGCACTAACACTTACATATCCATGGTGGTCTGCGGATTTAATCCCACTTTTTATATGTAAGTTCTAGTGATTATCAGTTCAATCATCTTTTTAATCCCATTTTTCTACATTTATTTCTAATTTCATGTTAACAAAATATATCAAATGAGTAATTAACTTGAATAAGCTATGTATTTCTAGATAATTGTTACGGGTACCGACCAGCATGAGATGTATGCTTTATTCACACCAACAAATAGAATTGAAAAATTAAGTGCTTACAGTTTCTTTGTTTCAGGAGATCTCCTCCCTCAAGTGGTTTCTTTTTACTTCTTTGTTTGTTTCGATATATTTCGATCGTGGGTCATATCTAATAGAGAGATTGGTTAGAATTCTAAGAGGGATCCTTCTATCACCCGTGAATGAAAGAGAAGACTTTGGACATTATGCTTTGATTCTGAGAGGGATCCTTCTAACAGCTCTTTGGACATTATGCTTTGATACCATATTTGATTTTGGATTGGTATCCCCATAAATCTCAACCCAAAATAACTCAAGCTTTGTTAGGAACCACGAATCTCCACAGTGGTAGGTATGATATTGTCTAATTTGAACATAAGCTCTAGTATCTCAATCCTTACTTATAAACCTATGATCAACCCCTTAATTAGCCGATGTGGGACTCCTCTTCCAATTATCCTCAACAAGCTTTTAGGGTATATTGACGAGAGTTTTCGATTGAAAAAAGGAAAAGGGCATGAAGCCCAACATAAAGATGAAGAAAACTACCTATATTAAGCTTATAATATGCATATCCCTTGAAAATGAAGATGAACATGGAATGATTTGGTCATATGAAGGCATTTTTCAAGCATACATATCAATTTCTTTCGATTTAAGCCCTTTTGATCGGTTTTCTGACATGAATGGATAGCTTGTTCATATGATATTCATAATAATGTGCAGCCAAGATGAGTGTTTGAAATCAGCTTTGGAGCAGTGA

mRNA sequence

ATGTTTTCTTCCACCAACAATCTCCACCTTTTCCCTGTTCAACACTACTTCGTCCCATCTTCTTCCTCCTCCTCCTCCTCTTACCACCAGCTGGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGGCCGGCGGTGGCGTGTCCTGCGAACAACGCGTTGGTCCTGCAAGATCTGCAAAACCCATTTGTTGGAGTGGGTGAAGAAGGAAGGATGAAGAATGAGGAAGAAGGGCAGTGTTATTCTTGTGGTGTGAACCAAAAGAGCAGAATGAAGAAAGATCGGCATAGCAAGATTTACACAGCTCAGGGTTTGAGAGACAGGAGAGTTAGATTATCCATTGAGATTTCAAGAAAGTTCTTTGATCTTCAAGACATGTTGGGTTATGACAAAGCTAGCAAAACCCTAGACTGGCTGCTCAACAACTCAAGAAAAGCTATTAAGGAGTTGACAAACTCAAACAACAACAACAGCAACAACAACAACAACTTGTATAACTTTGATTCTGAATTTGAGGCTCACAAAACAACATTGCCTAAATGTTGTAAGAAAAATGTTGGATTCCATGATGTTTTGGCCAAGGAATCTAGGGCAAAGGCAAGAGCAAGAGCTAGGGAAAGAACAAAGGAGAAAATCATGAGTAAATCCCAACAAGCTTTACCTGAGATTTTCAGCCACCAATTCCGCTCTCCTCCTCCTCCTCCTCCTCCGCCGCCACCGCCTGCTTCGTCGTCGTCTTCTTCTTCCATACCCGTCGTTCAAAAATCTGCAGCGAGCTCGTTGGATCAAGAAAACAACATCATAGGAATCATGTGGAAGCCATCTCCTATGATCACAAAAGGAGATATTTATTACAATAATTGCAACAATTTCTATTTTCCTTCCAATCTGCCTCCCAATTGGGACATCAATGTTGACTCTTTTGCCAGACCACAATCTGGCCAAGATGAGTGTTTGAAATCAGCTTTGGAGCAGTGA

Coding sequence (CDS)

ATGTTTTCTTCCACCAACAATCTCCACCTTTTCCCTGTTCAACACTACTTCGTCCCATCTTCTTCCTCCTCCTCCTCCTCTTACCACCAGCTGGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGGCCGGCGGTGGCGTGTCCTGCGAACAACGCGTTGGTCCTGCAAGATCTGCAAAACCCATTTGTTGGAGTGGGTGAAGAAGGAAGGATGAAGAATGAGGAAGAAGGGCAGTGTTATTCTTGTGGTGTGAACCAAAAGAGCAGAATGAAGAAAGATCGGCATAGCAAGATTTACACAGCTCAGGGTTTGAGAGACAGGAGAGTTAGATTATCCATTGAGATTTCAAGAAAGTTCTTTGATCTTCAAGACATGTTGGGTTATGACAAAGCTAGCAAAACCCTAGACTGGCTGCTCAACAACTCAAGAAAAGCTATTAAGGAGTTGACAAACTCAAACAACAACAACAGCAACAACAACAACAACTTGTATAACTTTGATTCTGAATTTGAGGCTCACAAAACAACATTGCCTAAATGTTGTAAGAAAAATGTTGGATTCCATGATGTTTTGGCCAAGGAATCTAGGGCAAAGGCAAGAGCAAGAGCTAGGGAAAGAACAAAGGAGAAAATCATGAGTAAATCCCAACAAGCTTTACCTGAGATTTTCAGCCACCAATTCCGCTCTCCTCCTCCTCCTCCTCCTCCGCCGCCACCGCCTGCTTCGTCGTCGTCTTCTTCTTCCATACCCGTCGTTCAAAAATCTGCAGCGAGCTCGTTGGATCAAGAAAACAACATCATAGGAATCATGTGGAAGCCATCTCCTATGATCACAAAAGGAGATATTTATTACAATAATTGCAACAATTTCTATTTTCCTTCCAATCTGCCTCCCAATTGGGACATCAATGTTGACTCTTTTGCCAGACCACAATCTGGCCAAGATGAGTGTTTGAAATCAGCTTTGGAGCAGTGA

Protein sequence

MFSSTNNLHLFPVQHYFVPSSSSSSSSYHQLVPPPPPPPPPPPGPAVACPANNALVLQDLQNPFVGVGEEGRMKNEEEGQCYSCGVNQKSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTNSNNNNSNNNNNLYNFDSEFEAHKTTLPKCCKKNVGFHDVLAKESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSPPPPPPPPPPPASSSSSSSIPVVQKSAASSLDQENNIIGIMWKPSPMITKGDIYYNNCNNFYFPSNLPPNWDINVDSFARPQSGQDECLKSALEQ
Homology
[Close]
BLAST of Cp4.1LG01g22120 vs. Swiss-Prot
Match: CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.3e-29
Identity = 81/152 (53.29%), Postives = 99/152 (65.13%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKIYT+QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S+ AI
Sbjct: 83  KQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAI 142

Query: 149 KELTNSNNNNSNNNN------NLYNFDSE-----FEAHKTTLPKCCKKNVGFHDVLAKES 208
           KEL  S +  SN+++       + + DSE      +         CK+ +  H   AKES
Sbjct: 143 KELVQSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKES 202

Query: 209 RAKARARARERTKEKIMSKSQQALPEIFSHQF 230
           RAKARARARERTKEK+  K       + +HQF
Sbjct: 203 RAKARARARERTKEKMCIKQLNEAIVLRNHQF 234

[Close]
BLAST of Cp4.1LG01g22120 vs. Swiss-Prot
Match: CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum GN=CYC PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.3e-29
Identity = 81/152 (53.29%), Postives = 99/152 (65.13%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKIYT+QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S+ AI
Sbjct: 75  KQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAI 134

Query: 149 KELTNSNNNNSNNNN------NLYNFDSE-----FEAHKTTLPKCCKKNVGFHDVLAKES 208
           KEL  S +  SN+++       + + DSE      +         CK+ +  H   AKES
Sbjct: 135 KELVQSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKES 194

Query: 209 RAKARARARERTKEKIMSKSQQALPEIFSHQF 230
           RAKARARARERTKEK+  K       + +HQF
Sbjct: 195 RAKARARARERTKEKMCIKQLNEAIVLRNHQF 226

[Close]
BLAST of Cp4.1LG01g22120 vs. Swiss-Prot
Match: CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum GN=CYC PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-28
Identity = 78/152 (51.32%), Postives = 95/152 (62.50%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKIYT+QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S+ A+
Sbjct: 75  KQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAV 134

Query: 149 KELTNSNNNNSNNNN-----------NLYNFDSEFEAHKTTLPKCCKKNVGFHDVLAKES 208
           KEL  S +  SN+++              N     +         CK+ +  H   AKES
Sbjct: 135 KELVQSKSTKSNSSSPCDDCEEVVSVESENVTDHSKGKSLKANNKCKEAMDSHQAAAKES 194

Query: 209 RAKARARARERTKEKIMSKSQQALPEIFSHQF 230
           RAKARARARERTKEK+  K       + +HQF
Sbjct: 195 RAKARARARERTKEKMCIKQLNEAIVLRNHQF 226

[Close]
BLAST of Cp4.1LG01g22120 vs. Swiss-Prot
Match: DICH_ANTMA (Transcription factor DICHOTOMA OS=Antirrhinum majus GN=DICH PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.6e-23
Identity = 98/229 (42.79%), Postives = 120/229 (52.40%), Query Frame = 1 

Query: 88  QKSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKA 147
           +K   KKDRHSKI   QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S++A
Sbjct: 82  KKHTPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEA 141

Query: 148 IKELTNSNNNNSNNNNNLYNFDSEF----------EAHKTTLPKCCKKNVGFHDV--LAK 207
           IKEL  S ++ SN +N+    D E              K  +     K  G  D   LAK
Sbjct: 142 IKELVQSKSSKSNISNSPSECDQEVLSADLPYIGSSKGKAAVGLNSNKCKGGRDAVDLAK 201

Query: 208 ESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSPPPPPPPPPPPASSSSSSSIPVVQ 267
           ESRAKARARARERTKEK+  K Q       S+++            P+    S S    +
Sbjct: 202 ESRAKARARARERTKEKMCIK-QLNQERNKSYEWN-----------PSVLFQSKSSQQFE 261

Query: 268 KSAASSLDQENNIIGIMWKPSPMITKGDIYYNNCNNFYF-PSNLPPNWD 304
            S  S+  +E N   IM        K  +  N+ + F F P N   NWD
Sbjct: 262 VSGPSTNYEELNQESIM-------IKRKLKQNHPSMFGFQPENATENWD 291

[Close]
BLAST of Cp4.1LG01g22120 vs. Swiss-Prot
Match: TCP1_ARATH (Transcription factor TCP1 OS=Arabidopsis thaliana GN=TCP1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.2e-21
Identity = 74/171 (43.27%), Postives = 93/171 (54.39%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKI TAQG+RDRRVRLSI I+R+FFDLQDMLG+DKASKTLDWLL  SRKAI
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 149 KELTNSNN-NNSNNNNNLYNFDSEFEAHK--------------------------TTLPK 208
           KE+  + N NN + +      D E E  K                           T   
Sbjct: 143 KEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAG 202

Query: 209 CCKKNVGFHDVLAKESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSP 233
             KK     ++ +K   AKAR +A+ERTKE +   + +   +I   +   P
Sbjct: 203 IRKKKSELRNISSKGLGAKARGKAKERTKEMMAYDNPETASDITQSEIMDP 253

[Close]
BLAST of Cp4.1LG01g22120 vs. TrEMBL
Match: A0A0A0KSL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644520 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 5.4e-76
Identity = 207/385 (53.77%), Postives = 233/385 (60.52%), Query Frame = 1 

Query: 1   MFSSTNNLHLFPVQHYFVPSSSSSSSSYHQLVPPPPPPPPPP--PGPAVACPANNALVLQ 60
           MFSSTNNLHLFP+Q YF  SSSSS S +H LV PPP PPP      P    P  + ++  
Sbjct: 1   MFSSTNNLHLFPLQQYFPSSSSSSPSYHHHLVAPPPSPPPHHHHSEPVYIGPLQDPVLSG 60

Query: 61  DLQNPFVGVGEE----GRMKNEEE-----------------GQCYSCGVN-----QKSRM 120
            +   F+ V EE     RMKNE++                 GQC+S         +K  +
Sbjct: 61  VVAPIFLQVQEEDRDQARMKNEQQEVAVLMSQNGNNNNNNNGQCFSSSTTLNNFTKKGSV 120

Query: 121 KKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELT 180
           KKDRHSKIYTAQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLL  SRKAIKELT
Sbjct: 121 KKDRHSKIYTAQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELT 180

Query: 181 NSNNNNSNNNN--------NLYNFDSEF-------------EAHKTTL----PKCCKKNV 240
                ++NNNN        + ++FD +F             EA K  +       CKKN+
Sbjct: 181 KKTQYHNNNNNIITSSSSSSKFHFDHDFEECEVISNDDDDEEAEKIIMLGKSSSNCKKNL 240

Query: 241 GFHDVLAKESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSPPPPPPPPPPPASSSS 300
           GFHDVLAKESRAKARARARERTKEK+          I + QFRSPPPPPP P  P     
Sbjct: 241 GFHDVLAKESRAKARARARERTKEKM----------IMNQQFRSPPPPPPQPSMPT---- 300

Query: 301 SSSIPVVQKSAASSLDQE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNNF 316
               PVVQK+A    DQE NNIIGIMWKPSPM+T    Y             YNN CNNF
Sbjct: 301 ----PVVQKAAGP--DQENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNNF 360

[Close]
BLAST of Cp4.1LG01g22120 vs. TrEMBL
Match: A0A0K2RVY1_CUCME (TCP transcription factor OS=Cucumis melo GN=CmTCP1 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74
Identity = 210/386 (54.40%), Postives = 234/386 (60.62%), Query Frame = 1 

Query: 1   MFSSTNNLHLFPVQHYFVPSSSSSSSSYHQ--LVPPPPPPPPPP--PGPAVACPANNALV 60
           MFSSTNNLHLFP+Q YF PSSSSSS SYH   LV P P PPP    P P    P  + ++
Sbjct: 1   MFSSTNNLHLFPLQQYF-PSSSSSSPSYHHHHLVAPLPSPPPHHHHPEPVYIGPPQDPVL 60

Query: 61  LQDLQNPFVGVGEE----GRMKNEEE-----------------GQCYSCGVN-----QKS 120
              +   F+ V EE     RMKNE++                 GQC+S         +K 
Sbjct: 61  SGVVAPIFLQVQEEDRDQARMKNEQQEVAVLMSQNGNNNNNSNGQCFSSSTTLNNFTKKG 120

Query: 121 RMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKE 180
            +KKDRHSKIYTAQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLL  SRKAIKE
Sbjct: 121 SVKKDRHSKIYTAQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKE 180

Query: 181 LTNSNNNNSNNNN-------NLYNFDSEF-------------EAHKTTL----PKCCKKN 240
           LT     ++NNNN       + ++FD +F             EA K  +       CKKN
Sbjct: 181 LTKKTQYHNNNNNIITSSSSSKFHFDHDFEECEVISNDDDDEEAEKIIMLGKSSSNCKKN 240

Query: 241 VGFHDVLAKESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSPPPPPPPPPPPASSS 300
           +GFHDVLAKESRAKARARARERTKEK+          I + QFRSPPPPPP P  P    
Sbjct: 241 LGFHDVLAKESRAKARARARERTKEKM----------IMNQQFRSPPPPPPQPSMPT--- 300

Query: 301 SSSSIPVVQKSAASSLDQE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNN 316
                PVVQK A S  DQE NNIIGIMWKPSPM+T    Y             YNN CNN
Sbjct: 301 -----PVVQKVAGS--DQENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNN 360

[Close]
BLAST of Cp4.1LG01g22120 vs. TrEMBL
Match: Q84RB5_9LAMI (DICHOTOMA-like protein (Fragment) OS=Asarina procumbens GN=DICH PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.0e-27
Identity = 93/175 (53.14%), Postives = 113/175 (64.57%), Query Frame = 1 

Query: 51  ANNALVLQDLQNPFVGVGEE--GRMKNEEEGQCYSCGVNQKSRMKKDRHSKIYTAQGLRD 110
           ANNA    + +  F G+ +E  G + N E     S  V +K   KKDRHSKIYTAQG RD
Sbjct: 46  ANNAPNDLEAEALFSGLNQELIGGVLNGEN----STMVPKKQTPKKDRHSKIYTAQGPRD 105

Query: 111 RRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTNSNNNNSNNNNNLYNF 170
           RRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S++AIKEL  S +  SN++N+   F
Sbjct: 106 RRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAIKELVQSKSAKSNSSNSPSEF 165

Query: 171 -------DSEFEAHKTTLPKCCKKNVGFHDVLAKESRAKARARARERTKEKIMSK 217
                  DS+ ++   +  KC      F   LAKESRAKARARARERTKEK+  K
Sbjct: 166 EEVSFGADSKGKSVLLSSNKCKGTKDAFD--LAKESRAKARARARERTKEKMCIK 214

[Close]
BLAST of Cp4.1LG01g22120 vs. TrEMBL
Match: Q7XJF2_9LAMI (CYCLOIDEA (Fragment) OS=Antirrhinum barrelieri PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 81/152 (53.29%), Postives = 99/152 (65.13%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKIYT+QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S+ AI
Sbjct: 62  KQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAI 121

Query: 149 KELTNSNNNNSNNNN------NLYNFDSE-----FEAHKTTLPKCCKKNVGFHDVLAKES 208
           KEL  S +  SN+++       + + DSE      +         CK+ +  H   AKES
Sbjct: 122 KELVQSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKES 181

Query: 209 RAKARARARERTKEKIMSKSQQALPEIFSHQF 230
           RAKARARARERTKEK+  K       + +HQF
Sbjct: 182 RAKARARARERTKEKMCIKQLNEAIVLRNHQF 213

[Close]
BLAST of Cp4.1LG01g22120 vs. TrEMBL
Match: Q9SPT3_9LAMI (Cyc1A protein (Fragment) OS=Antirrhinum graniticum GN=cyc1A PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 81/152 (53.29%), Postives = 99/152 (65.13%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKIYT+QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S+ AI
Sbjct: 74  KQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAI 133

Query: 149 KELTNSNNNNSNNNN------NLYNFDSE-----FEAHKTTLPKCCKKNVGFHDVLAKES 208
           KEL  S +  SN+++       + + DSE      +         CK+ +  H   AKES
Sbjct: 134 KELVQSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKES 193

Query: 209 RAKARARARERTKEKIMSKSQQALPEIFSHQF 230
           RAKARARARERTKEK+  K       + +HQF
Sbjct: 194 RAKARARARERTKEKMCIKQLNEAIVLRNHQF 225

[Close]
BLAST of Cp4.1LG01g22120 vs. TAIR10
Match: AT1G67260.1 (AT1G67260.1 TCP family transcription factor )

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-22
Identity = 74/171 (43.27%), Postives = 93/171 (54.39%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKI TAQG+RDRRVRLSI I+R+FFDLQDMLG+DKASKTLDWLL  SRKAI
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 149 KELTNSNN-NNSNNNNNLYNFDSEFEAHK--------------------------TTLPK 208
           KE+  + N NN + +      D E E  K                           T   
Sbjct: 143 KEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAG 202

Query: 209 CCKKNVGFHDVLAKESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSP 233
             KK     ++ +K   AKAR +A+ERTKE +   + +   +I   +   P
Sbjct: 203 IRKKKSELRNISSKGLGAKARGKAKERTKEMMAYDNPETASDITQSEIMDP 253

[Close]
BLAST of Cp4.1LG01g22120 vs. TAIR10
Match: AT1G68800.1 (AT1G68800.1 TCP domain protein 12)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-19
Identity = 59/123 (47.97%), Postives = 80/123 (65.04%), Query Frame = 1 

Query: 93  KKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELT 152
           K+DRHSKI TAQG RDRR+RLS++I+RKFFDLQDMLG+DKASKT++WL + S+ +IK+L 
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLK 171

Query: 153 NSNNNNSNNNNNLYNFDSEFEAHKTTLPKCCKKNVGFHD--VLAKESRAKARARARERTK 212
                +     + +    E E  +T   +  K+     +     KESR +AR RARERT 
Sbjct: 172 ERVAASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKESRERARKRARERTM 231

Query: 213 EKI 214
            K+
Sbjct: 232 AKM 234

[Close]
BLAST of Cp4.1LG01g22120 vs. TAIR10
Match: AT1G30210.1 (AT1G30210.1 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14
Identity = 51/146 (34.93%), Postives = 80/146 (54.79%), Query Frame = 1 

Query: 94  KDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTN 153
           KDRHSK+ T++GLRDRR+RLS+  + +F+DLQD LG+D+ SK ++WL+N +  +I +L  
Sbjct: 51  KDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPL 110

Query: 154 SNNNNSNNNNNLYNFDSEFEAHKTTLPKCCKKNVGFHDVLA---KESRAKARARARERT- 213
            N           NFD   + ++      C        +L+    E R KAR RARERT 
Sbjct: 111 LNT----------NFD-HLDQNQNQTKSACSSGTSESSLLSLSRTEIRGKARERARERTA 170

Query: 214 --KEKIMSKSQQALPEIFSHQFRSPP 234
             ++K +  +  +  ++ +  F   P
Sbjct: 171 KDRDKDLQNAHSSFTQLLTGGFDQQP 185

[Close]
BLAST of Cp4.1LG01g22120 vs. TAIR10
Match: AT4G18390.1 (AT4G18390.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 75.1 bits (183), Expect = 8.9e-14
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 1 

Query: 94  KDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTN 153
           KDRHSK+ T++G RDRRVRLS+  + +F+DLQD LGYD+ SK ++WL+  +  +I EL +
Sbjct: 43  KDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPS 102

Query: 154 SNNNN--SNNNNNLYNFDSEFEAHKTTLPKC-----CKKNVGFHDVLAKESRAKARARAR 213
            NN +  +++ N+     +   A+  +   C       KN     +   E R KAR RAR
Sbjct: 103 LNNTHFPTDDENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSLSRSELRDKARERAR 162

[Close]
BLAST of Cp4.1LG01g22120 vs. TAIR10
Match: AT3G18550.1 (AT3G18550.1 TCP family transcription factor )

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 42/112 (37.50%), Postives = 71/112 (63.39%), Query Frame = 1 

Query: 45  PAVACPANNALVLQDLQ-NPFVGVGEEG-RMKNEEEGQCYSCGVNQKSRMKKDRHSKIYT 104
           P++  P NN +V Q  + +  + + E+  R+   ++ +        K   + DRHSKI T
Sbjct: 102 PSLHFPLNNTIVEQPTEPSETINLIEDSQRISTSQDPKMKKA----KKPSRTDRHSKIKT 161

Query: 105 AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTNS 155
           A+G RDRR+RLS++++++ F LQDMLG+DKASKT++WLL  ++  I ++  +
Sbjct: 162 AKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEIIKIATT 209

[Close]
BLAST of Cp4.1LG01g22120 vs. NCBI nr
Match: gi|778708786|ref|XP_011656282.1| (PREDICTED: transcription factor DICHOTOMA-like [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 7.7e-76
Identity = 207/385 (53.77%), Postives = 233/385 (60.52%), Query Frame = 1 

Query: 1   MFSSTNNLHLFPVQHYFVPSSSSSSSSYHQLVPPPPPPPPPP--PGPAVACPANNALVLQ 60
           MFSSTNNLHLFP+Q YF  SSSSS S +H LV PPP PPP      P    P  + ++  
Sbjct: 1   MFSSTNNLHLFPLQQYFPSSSSSSPSYHHHLVAPPPSPPPHHHHSEPVYIGPLQDPVLSG 60

Query: 61  DLQNPFVGVGEE----GRMKNEEE-----------------GQCYSCGVN-----QKSRM 120
            +   F+ V EE     RMKNE++                 GQC+S         +K  +
Sbjct: 61  VVAPIFLQVQEEDRDQARMKNEQQEVAVLMSQNGNNNNNNNGQCFSSSTTLNNFTKKGSV 120

Query: 121 KKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELT 180
           KKDRHSKIYTAQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLL  SRKAIKELT
Sbjct: 121 KKDRHSKIYTAQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELT 180

Query: 181 NSNNNNSNNNN--------NLYNFDSEF-------------EAHKTTL----PKCCKKNV 240
                ++NNNN        + ++FD +F             EA K  +       CKKN+
Sbjct: 181 KKTQYHNNNNNIITSSSSSSKFHFDHDFEECEVISNDDDDEEAEKIIMLGKSSSNCKKNL 240

Query: 241 GFHDVLAKESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSPPPPPPPPPPPASSSS 300
           GFHDVLAKESRAKARARARERTKEK+          I + QFRSPPPPPP P  P     
Sbjct: 241 GFHDVLAKESRAKARARARERTKEKM----------IMNQQFRSPPPPPPQPSMPT---- 300

Query: 301 SSSIPVVQKSAASSLDQE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNNF 316
               PVVQK+A    DQE NNIIGIMWKPSPM+T    Y             YNN CNNF
Sbjct: 301 ----PVVQKAAGP--DQENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNNF 360

[Close]
BLAST of Cp4.1LG01g22120 vs. NCBI nr
Match: gi|914607620|dbj|BAS18996.1| (TCP transcription factor [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 1.9e-74
Identity = 210/386 (54.40%), Postives = 234/386 (60.62%), Query Frame = 1 

Query: 1   MFSSTNNLHLFPVQHYFVPSSSSSSSSYHQ--LVPPPPPPPPPP--PGPAVACPANNALV 60
           MFSSTNNLHLFP+Q YF PSSSSSS SYH   LV P P PPP    P P    P  + ++
Sbjct: 1   MFSSTNNLHLFPLQQYF-PSSSSSSPSYHHHHLVAPLPSPPPHHHHPEPVYIGPPQDPVL 60

Query: 61  LQDLQNPFVGVGEE----GRMKNEEE-----------------GQCYSCGVN-----QKS 120
              +   F+ V EE     RMKNE++                 GQC+S         +K 
Sbjct: 61  SGVVAPIFLQVQEEDRDQARMKNEQQEVAVLMSQNGNNNNNSNGQCFSSSTTLNNFTKKG 120

Query: 121 RMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKE 180
            +KKDRHSKIYTAQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLL  SRKAIKE
Sbjct: 121 SVKKDRHSKIYTAQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKE 180

Query: 181 LTNSNNNNSNNNN-------NLYNFDSEF-------------EAHKTTL----PKCCKKN 240
           LT     ++NNNN       + ++FD +F             EA K  +       CKKN
Sbjct: 181 LTKKTQYHNNNNNIITSSSSSKFHFDHDFEECEVISNDDDDEEAEKIIMLGKSSSNCKKN 240

Query: 241 VGFHDVLAKESRAKARARARERTKEKIMSKSQQALPEIFSHQFRSPPPPPPPPPPPASSS 300
           +GFHDVLAKESRAKARARARERTKEK+          I + QFRSPPPPPP P  P    
Sbjct: 241 LGFHDVLAKESRAKARARARERTKEKM----------IMNQQFRSPPPPPPQPSMPT--- 300

Query: 301 SSSSIPVVQKSAASSLDQE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNN 316
                PVVQK A S  DQE NNIIGIMWKPSPM+T    Y             YNN CNN
Sbjct: 301 -----PVVQKVAGS--DQENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNN 360

[Close]
BLAST of Cp4.1LG01g22120 vs. NCBI nr
Match: gi|659119535|ref|XP_008459708.1| (PREDICTED: transcription factor DICHOTOMA-like [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 8.3e-54
Identity = 181/369 (49.05%), Postives = 209/369 (56.64%), Query Frame = 1 

Query: 1   MFSSTNNLHLFPVQHYFVPSSSSSSSSYHQ--LVPPPPPPPPPP--PGPAVACPANNALV 60
           MFSSTNNLHLFP+Q YF PSSSSSS SYH   LV P P PPP    P P    P  + ++
Sbjct: 1   MFSSTNNLHLFPLQQYF-PSSSSSSPSYHHHHLVAPLPSPPPHHHHPEPVYIGPPQDPVL 60

Query: 61  LQDLQNPFVGVGEE----GRMKNEEE-----------------GQCYSCGVN-----QKS 120
              +   F+ V EE     RMKNE++                 GQC+S         +K 
Sbjct: 61  SGVVAPIFLQVQEEDRDQARMKNEQQEVAVLMSQNGNNNNNSNGQCFSSSTTLNNFTKKG 120

Query: 121 RMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKE 180
            +KKDRHSKIYTAQGLRDRRVRLSI+ISRK          DK ++      NN+   I  
Sbjct: 121 SVKKDRHSKIYTAQGLRDRRVRLSIDISRKV---------DKKTQ----YHNNNNNIITS 180

Query: 181 LTNSN---NNNSNNNNNLYNFDSEFEAHKTTL----PKCCKKNVGFHDVLAKESRAKARA 240
            ++S    +++      + N D + EA K  +       CKKN+GFHDVLAKESRAKARA
Sbjct: 181 SSSSKFHFDHDFEECEVISNDDDDEEAEKIIMLGKSSSNCKKNLGFHDVLAKESRAKARA 240

Query: 241 RARERTKEKIMSKSQQALPEIFSHQFRSPPPPPPPPPPPASSSSSSSIPVVQKSAASSLD 300
           RARERTKEK+          I + QFRSPPPPPP P  P         PVVQK A S  D
Sbjct: 241 RARERTKEKM----------IMNQQFRSPPPPPPQPSMPT--------PVVQKVAGS--D 300

Query: 301 QE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNNFYFP-SNLPPNWDINVD 316
           QE NNIIGIMWKPSPM+T    Y             YNN CNNFYFP SNL PNWDIN+D
Sbjct: 301 QENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNNFYFPASNLTPNWDINID 335

[Close]
BLAST of Cp4.1LG01g22120 vs. NCBI nr
Match: gi|29788717|gb|AAP03339.1| (DICHOTOMA-like protein [Asarina procumbens])

HSP 1 Score: 129.8 bits (325), Expect = 8.7e-27
Identity = 93/175 (53.14%), Postives = 113/175 (64.57%), Query Frame = 1 

Query: 51  ANNALVLQDLQNPFVGVGEE--GRMKNEEEGQCYSCGVNQKSRMKKDRHSKIYTAQGLRD 110
           ANNA    + +  F G+ +E  G + N E     S  V +K   KKDRHSKIYTAQG RD
Sbjct: 46  ANNAPNDLEAEALFSGLNQELIGGVLNGEN----STMVPKKQTPKKDRHSKIYTAQGPRD 105

Query: 111 RRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAIKELTNSNNNNSNNNNNLYNF 170
           RRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S++AIKEL  S +  SN++N+   F
Sbjct: 106 RRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAIKELVQSKSAKSNSSNSPSEF 165

Query: 171 -------DSEFEAHKTTLPKCCKKNVGFHDVLAKESRAKARARARERTKEKIMSK 217
                  DS+ ++   +  KC      F   LAKESRAKARARARERTKEK+  K
Sbjct: 166 EEVSFGADSKGKSVLLSSNKCKGTKDAFD--LAKESRAKARARARERTKEKMCIK 214

[Close]
BLAST of Cp4.1LG01g22120 vs. NCBI nr
Match: gi|6358549|gb|AAF07226.1| (cyc1A protein, partial [Antirrhinum graniticum])

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 81/152 (53.29%), Postives = 99/152 (65.13%), Query Frame = 1 

Query: 89  KSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLNNSRKAI 148
           K  +KKDRHSKIYT+QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLL  S+ AI
Sbjct: 74  KQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAI 133

Query: 149 KELTNSNNNNSNNNN------NLYNFDSE-----FEAHKTTLPKCCKKNVGFHDVLAKES 208
           KEL  S +  SN+++       + + DSE      +         CK+ +  H   AKES
Sbjct: 134 KELVQSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKES 193

Query: 209 RAKARARARERTKEKIMSKSQQALPEIFSHQF 230
           RAKARARARERTKEK+  K       + +HQF
Sbjct: 194 RAKARARARERTKEKMCIKQLNEAIVLRNHQF 225

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CYCLD_ANTMA9.3e-2953.29Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1[more]
CYCLD_ANTML9.3e-2953.29Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ... [more]
CYCLD_ANTMH3.5e-2851.32Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru... [more]
DICH_ANTMA7.6e-2342.79Transcription factor DICHOTOMA OS=Antirrhinum majus GN=DICH PE=2 SV=1[more]
TCP1_ARATH3.2e-2143.27Transcription factor TCP1 OS=Arabidopsis thaliana GN=TCP1 PE=1 SV=1[more]
BLAST of Cp4.1LG01g22120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSL1_CUCSA5.4e-7653.77Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644520 PE=4 SV=1[more]
A0A0K2RVY1_CUCME1.3e-7454.40TCP transcription factor OS=Cucumis melo GN=CmTCP1 PE=4 SV=1[more]
Q84RB5_9LAMI6.0e-2753.14DICHOTOMA-like protein (Fragment) OS=Asarina procumbens GN=DICH PE=4 SV=1[more]
Q7XJF2_9LAMI1.0e-2653.29CYCLOIDEA (Fragment) OS=Antirrhinum barrelieri PE=4 SV=1[more]
Q9SPT3_9LAMI1.0e-2653.29Cyc1A protein (Fragment) OS=Antirrhinum graniticum GN=cyc1A PE=4 SV=1[more]
BLAST of Cp4.1LG01g22120 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67260.11.8e-2243.27 TCP family transcription factor [more]
AT1G68800.12.4e-1947.97 TCP domain protein 12[more]
AT1G30210.11.8e-1434.93 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24[more]
AT4G18390.18.9e-1439.68 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2[more]
AT3G18550.12.0e-1337.50 TCP family transcription factor [more]
BLAST of Cp4.1LG01g22120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708786|ref|XP_011656282.1|7.7e-7653.77PREDICTED: transcription factor DICHOTOMA-like [Cucumis sativus][more]
gi|914607620|dbj|BAS18996.1|1.9e-7454.40TCP transcription factor [Cucumis melo][more]
gi|659119535|ref|XP_008459708.1|8.3e-5449.05PREDICTED: transcription factor DICHOTOMA-like [Cucumis melo][more]
gi|29788717|gb|AAP03339.1|8.7e-2753.14DICHOTOMA-like protein [Asarina procumbens][more]
gi|6358549|gb|AAF07226.1|1.5e-2653.29cyc1A protein, partial [Antirrhinum graniticum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017888CYC/TB1_R_domain
IPR017887TF_TCP_subgr
IPR005333Transcription_factor_TCP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009908 flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22120.1Cp4.1LG01g22120.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 92..215
score: 1.1
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 93..151
score: 35
IPR017888CYC/TB1, R domainPROFILEPS51370Rcoord: 195..212
score: 12
NoneNo IPR availableunknownCoilCoilcoord: 317..326
scor
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 1..215
score: 5.5
NoneNo IPR availablePANTHERPTHR31072:SF18TRANSCRIPTION FACTOR TCP1coord: 1..215
score: 5.5
NoneNo IPR availableunknownSSF101447Formin homology 2 domain (FH2 domain)coord: 33..43
score: 5.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g22120Cucsa.238090Cucumber (Gy14) v1cgycpeB0628
Cp4.1LG01g22120CmaCh15G001890Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g22120CmaCh04G028480Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g22120CmoCh04G029770Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g22120CmoCh15G002020Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g22120Cla016452Watermelon (97103) v1cpewmB462
Cp4.1LG01g22120Csa5G644520Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g22120MELO3C022091Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g22120ClCG11G005380Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g22120CSPI05G30040Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g22120Lsi03G002320Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g22120MELO3C022091.2Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g22120CsaV3_5G039160Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g22120CsaV3_1G006490Cucumber (Chinese Long) v3cpecucB0472
Cp4.1LG01g22120Bhi06G000087Wax gourdcpewgoB0501
Cp4.1LG01g22120CsGy5G029420Cucumber (Gy14) v2cgybcpeB625
Cp4.1LG01g22120Carg02180Silver-seed gourdcarcpeB0374
Cp4.1LG01g22120Carg05924Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g22120Cp4.1LG13g07780Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g22120Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG01g22120Cucumber (Gy14) v1cgycpeB0627
Cp4.1LG01g22120Cucumber (Chinese Long) v2cpecuB447
Cp4.1LG01g22120Melon (DHL92) v3.5.1cpemeB349
Cp4.1LG01g22120Cucumber (Gy14) v2cgybcpeB514
Cp4.1LG01g22120Silver-seed gourdcarcpeB0892
Cp4.1LG01g22120Cucumber (Chinese Long) v3cpecucB0509
Cp4.1LG01g22120Cucumber (Chinese Long) v3cpecucB0553
Cp4.1LG01g22120Wax gourdcpewgoB0546