Carg05924 (gene) Silver-seed gourd

Overview
NameCarg05924
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCycloidea-like protein group 1A
LocationCucurbita_argyrosperma_scaffold_026 : 306258 .. 308781 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTCTTCCACCAACAATCTCCACATTTTCCCTCTTCAACACTACTTCGTCCCATCTTCTTCCTCCTCTTACCACCAGGTTGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGGGGCCGGCGGTGGCGTCTCCTGAGAACAACGTGTTGGTCCAGCAAGATCTGGAGAACCCATTTGTTGGAGTGGGTGAAGAAGGAAGGATGAAGAATGAGCAAGAAGGGCAGTGTTATTCTTCAGGTGTGAACAAAAAGAGCAGAATGAAGAAAGATCGGCATAGCAAGATTTACACAGCTCAGGGTTTGAGAGACAGGAGAGTTAGATTATCCATTGAGATTTCTAGAAAGTTCTTCGATCTTCAAGACATGTTGGGTTATGACAAAGCTAGCAAAACCCTAGACTGGCTGCTCACCAACTCAAGAAAAGCCATTAAAGAGTTGACAAACAACAACAACAACAACAACCACTTGTATAACTTTGATTCTGAATTTGAGGCTCACAAATCAACATTGCCTAAATGTTCTAACAAAAATGTTGCATTCCATAATGTTTTGGCCAAGGAATCTAGGGCAAAGGCAAGAGCAAGAGCTAGGGAAAGAACAAAGGAGAAAATCATGAGTAAATCCCAACAACCTTTACCTGAGATTTTCAGCCACCAATTCCGCTCTCCTCCTCCGCCGCCTCCGCCTGCTTCGTCGTCGTCTTCTTCCATACCCGTCGTTCAAAAAGCTGCAGCGACCTCGTTGGATCAAGAAAACAACATCATAGGAATCATGTGGAAGCCATCTCCTATGATCACAAAAGGAGATATTTATTACAATAATTGCAACAATTTCTATTTTCCTTCCAATCTGCCTCCCAATTGGGACATCAATGTTGACTCTTTTGCCAGACCACAATCTGGGTTTTGCTCCATTGCCAACATGGATTCACTCCCAGGTTATTATTATTATTATTATTATTATTTTTTAATTTAAATTTAATTTTTGAAGAACATACAGATCATTGTTGAGGTGCAATTTGCAGAATTTCAAGTGTGTGCGAAGCCATGGGATAGCTGCAGCAACAACCAACACCTGCACTAACACTTACATATCCATGGTGCTCTGCGGATTTAATCCCACTTTTTATATGTAAGTTCTAGTGATTATCAGTTCAATCACCTTTTTAATCCCATTTTTCTACATTTATTTCTAATTTCATGTTAACAAAATATATAAAATGAGTAATTAACTTGAATAAGCTATGTATTTCTAGATAATTGTTAGTACGAGAAAATTTAGGACATAAATAGTGAATTATTTAGTAGAATTGTTACGGGTACCGACCAGCATGAGATGTATGCTCTATTCACACCAACAAATAGAATTAAAAAATTAAGTGCTTAAAGTTTATTTGTTTCCGGAGATCTGAATGAAAAATTAGGGGGATAAAGTTTGTTTGTTTAAGGAGATCTCTTCCTCAAGTGGTTTCTTTTTACTTCTTTATTTTTTTTCGATATATTTCGATCGTGGGTCATATCTAATAGGGAGATTGTTTAGAATTCTTAGAGGATCCTTCTATCACCCGTGAATGAAAGAGAAGACTTCGTTTTTAGTTTTAAACTTATGAAAACGAGAATCGAGGCCTTTGAATCATAAGTGTGTGTTGGACAGGGGAACTTGGGATGTGGAAAATGTTCCATGAACCTTTAGTAAAGAGCTTCAACGAATTTAATTCAATTGAAGTTCTGTGAAGAACATTCAAGAAGCCAAGGAAGTTGAAGATGATAGCAATAAACTCAAATTATGAAGCTAACCAAGCTCTAAATTCAGCTAACAGCTATTTGGACATGATGCTTTGATACCATATTTGATTTTGGATTGGTATCACCATAAATCTCAACCCTAAATAACTCAAGTTTCGGTGGTATTGACCAATTTGAGCATAAGCTCTAGTATCTCAATCCTTACTTATAAACCTATGATCAACCTCTTAATTAGCCGATGTAGGACTCTTCTCCCAATAATCCTTAACGAGCTTTTAGGGCATAATGACGAGAGTTTTCGATCGAAAAAAAGGAAAAGGGCATGAAGCCCAACATAAAAGATGAAGAAAACTACCTATATTAAGGTTATAATATGCATATCCCTTGAAAATGAAGATGAACATGGAATGATTTGGTCATATGAAGGCATTTTTCAAGCATACATATCAATGGATAGCTTGTTCATATGATATTCATATAATCTAAGTATGGGTATGAAATGTTGAAATGTGCAGCCAACATGAGTGTTTGAGATCAGCTTTGGAGCAGTGAAGGGTTTGGTGGCACAAAAAAAGGATGGAAGCATTGGGAGATTGAGTTATTTTGTGATGAATTAGGACATCATCCCTATGATATCTTTATGTATTTGTTATCTCTCTTTTTTGATGTAATTAATGAAGCAAACAGATTGGAATGAAACACTAATGATTTGAATCTAATATTGTTCCAGTTGTGACCTAAGTTTGATGTGTGTGATATGAATATGATGTTTCTTT

mRNA sequence

ATGTTTTCTTCCACCAACAATCTCCACATTTTCCCTCTTCAACACTACTTCGTCCCATCTTCTTCCTCCTCTTACCACCAGGTTGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGGGGCCGGCGGTGGCGTCTCCTGAGAACAACGTGTTGGTCCAGCAAGATCTGGAGAACCCATTTGTTGGAGTGGGTGAAGAAGGAAGGATGAAGAATGAGCAAGAAGGGCAGTGTTATTCTTCAGGTGTGAACAAAAAGAGCAGAATGAAGAAAGATCGGCATAGCAAGATTTACACAGCTCAGGGTTTGAGAGACAGGAGAGTTAGATTATCCATTGAGATTTCTAGAAAGTTCTTCGATCTTCAAGACATGTTGGGTTATGACAAAGCTAGCAAAACCCTAGACTGGCTGCTCACCAACTCAAGAAAAGCCATTAAAGAGTTGACAAACAACAACAACAACAACAACCACTTGTATAACTTTGATTCTGAATTTGAGGCTCACAAATCAACATTGCCTAAATGTTCTAACAAAAATGTTGCATTCCATAATGTTTTGGCCAAGGAATCTAGGGCAAAGGCAAGAGCAAGAGCTAGGGAAAGAACAAAGGAGAAAATCATGAGTAAATCCCAACAACCTTTACCTGAGATTTTCAGCCACCAATTCCGCTCTCCTCCTCCGCCGCCTCCGCCTGCTTCGTCGTCGTCTTCTTCCATACCCGTCGTTCAAAAAGCTGCAGCGACCTCGTTGGATCAAGAAAACAACATCATAGGAATCATGTGGAAGCCATCTCCTATGATCACAAAAGGAGATATTTATTACAATAATTGCAACAATTTCTATTTTCCTTCCAATCTGCCTCCCAATTGGGACATCAATGTTGACTCTTTTGCCAGACCACAATCTGGGTTTTGCTCCATTGCCAACATGGATTCACTCCCAGAATTTCAAGTGTGTGCGAAGCCATGGGATAGCTGCAGCAACAACCAACACCTGCACTAACACTTACATATCCATGGTGCTCTGCGGATTTAATCCCACTTTTTATATCCAACATGAGTGTTTGAGATCAGCTTTGGAGCAGTGAAGGGTTTGGTGGCACAAAAAAAGGATGGAAGCATTGGGAGATTGAGTTATTTTGTGATGAATTAGGACATCATCCCTATGATATCTTTATGTATTTGTTATCTCTCTTTTTTGATGTAATTAATGAAGCAAACAGATTGGAATGAAACACTAATGATTTGAATCTAATATTGTTCCAGTTGTGACCTAAGTTTGATGTGTGTGATATGAATATGATGTTTCTTT

Coding sequence (CDS)

ATGTTTTCTTCCACCAACAATCTCCACATTTTCCCTCTTCAACACTACTTCGTCCCATCTTCTTCCTCCTCTTACCACCAGGTTGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGGGGCCGGCGGTGGCGTCTCCTGAGAACAACGTGTTGGTCCAGCAAGATCTGGAGAACCCATTTGTTGGAGTGGGTGAAGAAGGAAGGATGAAGAATGAGCAAGAAGGGCAGTGTTATTCTTCAGGTGTGAACAAAAAGAGCAGAATGAAGAAAGATCGGCATAGCAAGATTTACACAGCTCAGGGTTTGAGAGACAGGAGAGTTAGATTATCCATTGAGATTTCTAGAAAGTTCTTCGATCTTCAAGACATGTTGGGTTATGACAAAGCTAGCAAAACCCTAGACTGGCTGCTCACCAACTCAAGAAAAGCCATTAAAGAGTTGACAAACAACAACAACAACAACAACCACTTGTATAACTTTGATTCTGAATTTGAGGCTCACAAATCAACATTGCCTAAATGTTCTAACAAAAATGTTGCATTCCATAATGTTTTGGCCAAGGAATCTAGGGCAAAGGCAAGAGCAAGAGCTAGGGAAAGAACAAAGGAGAAAATCATGAGTAAATCCCAACAACCTTTACCTGAGATTTTCAGCCACCAATTCCGCTCTCCTCCTCCGCCGCCTCCGCCTGCTTCGTCGTCGTCTTCTTCCATACCCGTCGTTCAAAAAGCTGCAGCGACCTCGTTGGATCAAGAAAACAACATCATAGGAATCATGTGGAAGCCATCTCCTATGATCACAAAAGGAGATATTTATTACAATAATTGCAACAATTTCTATTTTCCTTCCAATCTGCCTCCCAATTGGGACATCAATGTTGACTCTTTTGCCAGACCACAATCTGGGTTTTGCTCCATTGCCAACATGGATTCACTCCCAGAATTTCAAGTGTGTGCGAAGCCATGGGATAGCTGCAGCAACAACCAACACCTGCACTAA

Protein sequence

MFSSTNNLHIFPLQHYFVPSSSSSYHQVVPPPPPPPPPPGPAVASPENNVLVQQDLENPFVGVGEEGRMKNEQEGQCYSSGVNKKSRMKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTNNNNNNNHLYNFDSEFEAHKSTLPKCSNKNVAFHNVLAKESRAKARARARERTKEKIMSKSQQPLPEIFSHQFRSPPPPPPPASSSSSSIPVVQKAAATSLDQENNIIGIMWKPSPMITKGDIYYNNCNNFYFPSNLPPNWDINVDSFARPQSGFCSIANMDSLPEFQVCAKPWDSCSNNQHLH
Homology
[Close]
BLAST of Carg05924 vs. NCBI nr
Match: XP_022959978.1 (transcription factor DICHOTOMA-like [Cucurbita moschata])

HSP 1 Score: 426.4 bits (1095), Expect = 8.9e-116
Identity = 309/332 (93.07%), Postives = 312/332 (93.98%), Query Frame = 0 

Query: 1   MFSSTNNLHIFPLQHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVQQDLENPF 60
           MFSSTNNLH+FPLQHY    XXXXXXXXXXXXXXXXXXXXXX       V V QDL+NPF
Sbjct: 1   MFSSTNNLHLFPLQHY----XXXXXXXXXXXXXXXXXXXXXXVASPANNVFVPQDLQNPF 60

Query: 61  VGVGEEGRMKNEQEGQCYSSXXXXXXXXXXXXXXXXXXAQGLRDRRVRLSIEISRKFFDL 120
           VGVGEEGRMKNEQEGQCYSSXXXXXXXXXXXXXXXXX AQGLRDRRVRLSIEISRKFFDL
Sbjct: 61  VGVGEEGRMKNEQEGQCYSSXXXXXXXXXXXXXXXXXTAQGLRDRRVRLSIEISRKFFDL 120

Query: 121 QDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLYNFDSEFEAHKSTLPKCSNKNVA 180
           QDMLGYDKASKTLDWLLTNSRKAIKELT     XX LYNFDSEFEAHKSTLPKCSNKNVA
Sbjct: 121 QDMLGYDKASKTLDWLLTNSRKAIKELT--NNNXXNLYNFDSEFEAHKSTLPKCSNKNVA 180

Query: 181 FHNVLAKESRXXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXX 240
           FH+VLAKESRXXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXX
Sbjct: 181 FHHVLAKESRXXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXDQENNIIGIMWKPSPMITKGDIYYNNCNNFYFPSNLPPNWDINVDSFARPQ 300
           XXXXXXXXXDQENNIIGIMWKPSPMITKGDIYYNNCNNFYFPSNLPPNWDINVDSFARPQ
Sbjct: 241 XXXXXXXXXDQENNIIGIMWKPSPMITKGDIYYNNCNNFYFPSNLPPNWDINVDSFARPQ 300

Query: 301 SGFCSIANMDSLPEFQVCAKPWDSCSNNQHLH 333
           SGFCSIANMDSLPEFQVCAKPWDSCSNNQHLH
Sbjct: 301 SGFCSIANMDSLPEFQVCAKPWDSCSNNQHLH 326

[Close]
BLAST of Carg05924 vs. NCBI nr
Match: XP_022990778.1 (transcription factor DICHOTOMA-like [Cucurbita maxima])

HSP 1 Score: 394.0 bits (1011), Expect = 4.9e-106
Identity = 283/341 (82.99%), Postives = 288/341 (84.46%), Query Frame = 0 

Query: 1   MFSSTNNLHIFPLQHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVQQDLENPF 60
           MFSSTNNLH+FPLQHY       XXXXXXXXXXXXXXXXXXXXXX    V V QDL+NPF
Sbjct: 1   MFSSTNNLHLFPLQHY-------XXXXXXXXXXXXXXXXXXXXXXPANNVFVPQDLQNPF 60

Query: 61  VGVGEEGRMKNEQEGQCYSS----XXXXXXXXXXXXXXXXXXAQGLRDRRVRLSIEISRK 120
           V VGEE RMKNEQEGQCYSS                      AQGLRDRRVRLSIEISRK
Sbjct: 61  VVVGEEARMKNEQEGQCYSSGVNNLVNKKSTMKKDRHSKIYTAQGLRDRRVRLSIEISRK 120

Query: 121 FFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLYNFDSEFEAHKSTLPKCSN 180
           FFDLQDMLGYDKASKTLDWLLT SRKAIKELT XXXXXXXLYNFDSEFEAHK+TLPK   
Sbjct: 121 FFDLQDMLGYDKASKTLDWLLTKSRKAIKELTNXXXXXXXLYNFDSEFEAHKTTLPKSCK 180

Query: 181 KNVAFHNVLAKESRXXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRS-----XXXXXXXX 240
           KNVAFH+VLAKESRXXXXXXXXXXXXXXXXXX QQ LPEIFSHQF S     XXXXXXXX
Sbjct: 181 KNVAFHDVLAKESRXXXXXXXXXXXXXXXXXXSQQALPEIFSHQFHSXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXDQENNIIGIMWKPSPMITKGDIYYNNCNNFYFPSNLPPNWDI 300
           XXXXXXXXXXXXXXXX  DQENNIIGIMWKPSPMITKGDIYYNNCNNFYFP NLPPNWDI
Sbjct: 241 XXXXXXXXXXXXXXXXSLDQENNIIGIMWKPSPMITKGDIYYNNCNNFYFPPNLPPNWDI 300

Query: 301 NVDSFARPQSGFCSIANMDSLPEFQVCAKPWDSCSNNQHLH 333
           N+DSFARPQSGFCSIANMDSLPEFQVCAKPWDSCSNNQHLH
Sbjct: 301 NIDSFARPQSGFCSIANMDSLPEFQVCAKPWDSCSNNQHLH 334

[Close]
BLAST of Carg05924 vs. NCBI nr
Match: XP_022133637.1 (transcription factor DICHOTOMA-like [Momordica charantia])

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-60
Identity = 174/262 (66.41%), Postives = 183/262 (69.85%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXL- 158
           AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLT SRKAIKELT        + 
Sbjct: 113 AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELTKKNGAAALVP 172

Query: 159 ------YNFD-------SEFEAHKSTLPKCSNKN-VAFHNVLAKESRXXXXXXXXXXXXX 218
                  NF+        E E    +      KN V FH+V+AKESR XXXXXXXXXXXX
Sbjct: 173 KNSNLFNNFEECEVISNDEAEKFMGSSKSSPKKNLVGFHDVVAKESR-XXXXXXXXXXXX 232

Query: 219 XXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXXXXXXXXXXXDQENNIIGIMWKPS 278
           XXXXXX QPLPEI SHQFR               XXXXXXXXXXXX       GIMWKPS
Sbjct: 233 XXXXXXSQPLPEILSHQFR--------------PXXXXXXXXXXXXXXXXXXXGIMWKPS 292

Query: 279 P----------MITKGD--IYYNNCNNFYFPSNLPPNWDINVDSFARPQSGFCSIANMDS 333
           P          +I+KGD   YYNNCNNFYFPSNLPPNWDINVDSFAR QSGFCSIAN+DS
Sbjct: 293 PITTSNYQKNLVISKGDAAAYYNNCNNFYFPSNLPPNWDINVDSFARAQSGFCSIANIDS 352

[Close]
BLAST of Carg05924 vs. NCBI nr
Match: XP_011656282.1 (PREDICTED: transcription factor DICHOTOMA-like [Cucumis sativus] >KGN52575.1 hypothetical protein Csa_5G644520 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-50
Identity = 164/280 (58.57%), Postives = 170/280 (60.71%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLY 158
           AQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLLT SRKAIKELT XXXXXXX  
Sbjct: 131 AQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELTKXXXXXXXXX 190

Query: 159 NFDSEFEAHKSTLPKC-----------------------------SNKNVAFHNVLAKES 218
                                                          KN+ FH+VLAKES
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKKNLGFHDVLAKES 250

Query: 219 RXXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXXXXXXXXXXX 278
                          XXXXX              XXXXXXXXXXXXXXXXXXX       
Sbjct: 251 ---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQKAAGP 310

Query: 279 DQE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNNFYFP-SNLPPNWDINV 333
           DQE NNIIGIMWKPSPM+T    Y             YNN CNNFYFP SNL PNWDIN+
Sbjct: 311 DQENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNNFYFPASNLTPNWDINI 370

[Close]
BLAST of Carg05924 vs. NCBI nr
Match: BAS18996.1 (TCP transcription factor [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 8.5e-50
Identity = 162/279 (58.06%), Postives = 168/279 (60.22%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLY 158
           AQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLLT SRKAIKELT XXXXXXX  
Sbjct: 132 AQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELTKXXXXXXXXX 191

Query: 159 NFDSEFEAHKSTLPKC----------------------------SNKNVAFHNVLAKESR 218
                                                         KN+ FH+VLAKES 
Sbjct: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKKNLGFHDVLAKES- 251

Query: 219 XXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXXXXXXXXXXXD 278
                         XXXXX              XXXXXXXXXXXXXXXXXX        D
Sbjct: 252 --------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQKVAGSD 311

Query: 279 QE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNNFYFP-SNLPPNWDINVD 333
           QE NNIIGIMWKPSPM+T    Y             YNN CNNFYFP SNL PNWDIN+D
Sbjct: 312 QENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNNFYFPASNLTPNWDINID 371

[Close]
BLAST of Carg05924 vs. TAIR10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 85.5 bits (210), Expect = 6.7e-17
Identity = 41/49 (83.67%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           AQG+RDRRVRLSI I+R+FFDLQDMLG+DKASKTLDWLL  SRKAIKE+
Sbjct: 97  AQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEV 145

[Close]
BLAST of Carg05924 vs. TAIR10
Match: AT1G68800.1 (TCP domain protein 12)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-14
Identity = 34/49 (69.39%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           AQG RDRR+RLS++I+RKFFDLQDMLG+DKASKT++WL + S+ +IK+L
Sbjct: 122 AQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQL 170

[Close]
BLAST of Carg05924 vs. TAIR10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 27/46 (58.70%), Postives = 40/46 (86.96%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAI 145
           A+G RDRR+RLS++++++ F LQDMLG+DKASKT++WLLT ++  I
Sbjct: 158 AKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEI 203

[Close]
BLAST of Carg05924 vs. TAIR10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 59.7 bits (143), Expect = 4.0e-09
Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           A+G RDRRVRLS   + +F+D+QD LG+D+ SK +DWL+T ++ AI +L
Sbjct: 59  AKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDL 107

[Close]
BLAST of Carg05924 vs. TAIR10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           ++G RDRRVRLS+  + +F+DLQD LGYD+ SK ++WL+  +  +I EL
Sbjct: 52  SKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISEL 100

[Close]
BLAST of Carg05924 vs. Swiss-Prot
Match: sp|Q9FYG7|TCP1_ARATH (Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15
Identity = 41/49 (83.67%), Postives = 46/49 (93.88%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           AQG+RDRRVRLSI I+R+FFDLQDMLG+DKASKTLDWLL  SRKAIKE+
Sbjct: 97  AQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEV 145

[Close]
BLAST of Carg05924 vs. Swiss-Prot
Match: sp|Q9SNW8|DICH_ANTMA (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.0e-14
Identity = 42/64 (65.62%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 100 QGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLYN 159
           QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLLT S++AIKEL         + N
Sbjct: 98  QGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAIKELVQSKSSKSNISN 157

Query: 160 FDSE 164
             SE
Sbjct: 158 SPSE 161

[Close]
BLAST of Carg05924 vs. Swiss-Prot
Match: sp|O49250|CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.9e-14
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           +QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLLT S+ AIKEL
Sbjct: 97  SQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKEL 145

[Close]
BLAST of Carg05924 vs. Swiss-Prot
Match: sp|Q9SBV6|CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.9e-14
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           +QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLLT S+ AIKEL
Sbjct: 89  SQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKEL 137

[Close]
BLAST of Carg05924 vs. Swiss-Prot
Match: sp|Q9SBV9|CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.1e-14
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKEL 148
           +QG RDRRVRLSI I+RKFFDLQ+MLG+DK SKTLDWLLT S+ A+KEL
Sbjct: 89  SQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKEL 137

[Close]
BLAST of Carg05924 vs. TrEMBL
Match: tr|A0A0A0KSL1|A0A0A0KSL1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644520 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.6e-51
Identity = 164/280 (58.57%), Postives = 170/280 (60.71%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLY 158
           AQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLLT SRKAIKELT XXXXXXX  
Sbjct: 131 AQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELTKXXXXXXXXX 190

Query: 159 NFDSEFEAHKSTLPKC-----------------------------SNKNVAFHNVLAKES 218
                                                          KN+ FH+VLAKES
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKKNLGFHDVLAKES 250

Query: 219 RXXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXXXXXXXXXXX 278
                          XXXXX              XXXXXXXXXXXXXXXXXXX       
Sbjct: 251 ---------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQKAAGP 310

Query: 279 DQE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNNFYFP-SNLPPNWDINV 333
           DQE NNIIGIMWKPSPM+T    Y             YNN CNNFYFP SNL PNWDIN+
Sbjct: 311 DQENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNNFYFPASNLTPNWDINI 370

[Close]
BLAST of Carg05924 vs. TrEMBL
Match: tr|A0A0K2RVY1|A0A0K2RVY1_CUCME (TCP transcription factor OS=Cucumis melo OX=3656 GN=CmTCP1 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 5.6e-50
Identity = 162/279 (58.06%), Postives = 168/279 (60.22%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLY 158
           AQGLRDRRVRLSI+ISRKFFDLQDMLGYDKASKTLDWLLT SRKAIKELT XXXXXXX  
Sbjct: 132 AQGLRDRRVRLSIDISRKFFDLQDMLGYDKASKTLDWLLTKSRKAIKELTKXXXXXXXXX 191

Query: 159 NFDSEFEAHKSTLPKC----------------------------SNKNVAFHNVLAKESR 218
                                                         KN+ FH+VLAKES 
Sbjct: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCKKNLGFHDVLAKES- 251

Query: 219 XXXXXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXXXXXXXXXXXD 278
                         XXXXX              XXXXXXXXXXXXXXXXXX        D
Sbjct: 252 --------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVQKVAGSD 311

Query: 279 QE-NNIIGIMWKPSPMITKGDIY-------------YNN-CNNFYFP-SNLPPNWDINVD 333
           QE NNIIGIMWKPSPM+T    Y             YNN CNNFYFP SNL PNWDIN+D
Sbjct: 312 QENNNIIGIMWKPSPMVTSSSSYQKNLVISKGESCNYNNYCNNFYFPASNLTPNWDINID 371

[Close]
BLAST of Carg05924 vs. TrEMBL
Match: tr|A0A2N9IZS9|A0A2N9IZS9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57960 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.5e-21
Identity = 94/279 (33.69%), Postives = 118/279 (42.29%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXL- 158
           +QGLRDRRVRLSIEI+RKFFDLQDMLG+DKASKTLDWLLT SRKAIKE+T          
Sbjct: 99  SQGLRDRRVRLSIEIARKFFDLQDMLGFDKASKTLDWLLTKSRKAIKEVTKMKQSCNGCA 158

Query: 159 -----YNFDSEFEAHKST--------LPKCSNKNVAFHNVLAKESRXXXXXXXXXXXXXX 218
                 + D E  +HK T        +    NKN +     +KE                
Sbjct: 159 KTLSPISSDCEVLSHKVTTDSGNLEGIVLSKNKNSSLVTSGSKEKNMKKLSKDEIHLLSK 218

Query: 219 XXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXXXXXXXXXXXDQENNIIGIMWKPSP 278
              XX                                        ++ + ++G + +PS 
Sbjct: 219 ELRXXXXXXXXXXXXXXMCTRKLHESRKCPAPGGPQMLQQQFEACEKSSKVVGEIEQPSS 278

Query: 279 MITKGDI---------------------------YY----NNCNNFYFPSNLPPNWDINV 333
               GD                            YY     +C+N YFPS+ P NWDIN 
Sbjct: 279 HQMLGDQGLRANVFEESILIRRKIKQSSGAGRLGYYQPNNESCSN-YFPSS-PLNWDINS 338

[Close]
BLAST of Carg05924 vs. TrEMBL
Match: tr|V7B185|V7B185_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G020400g PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17
Identity = 92/251 (36.65%), Postives = 122/251 (48.61%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLY 158
           +QGLRDRRVRLSIEI+RKFFDLQDMLG+DKAS TLDWL T S+KAIKELT         +
Sbjct: 109 SQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVDS-F 168

Query: 159 NFDS------------EFEAHKSTLPKCSNKNVAFHNVLAKESRXXXXXXXXXXXXXXXX 218
            F S            + E H+    +        + V AK   XXXXXXXXXXXX    
Sbjct: 169 EFSSSSDGEVVSVIHQDKEQHQGVDLEEGKLKEPVYCVKAKMKXXXXXXXXXXXXXTSCK 228

Query: 219 XXXQQ---PLPEIFSHQF-------RSXXXXXXXXXXXXXXXXXXXXXXXXXXDQENNII 278
              Q+     P   +HQ        R+                            +++++
Sbjct: 229 GKVQEFNKNCPATENHQILNQSRSDRNLIEDVNGGMTRDDDFNVIEESIVIKRKLKHSLM 288

Query: 279 GIMWKPSPMITKGDIYYNNCNNFYFPSNLPPNWDINVDSFARPQSGFCSIANMDSLPEFQ 328
             +   + +I K +   NN +   FP NL PNW+ N  S A  +S FC+IA+M+     Q
Sbjct: 289 SSIHHQNAVIPK-EASVNNSDYHSFP-NLSPNWEAN--SAANGRSTFCAIASMNLSAGLQ 348

[Close]
BLAST of Carg05924 vs. TrEMBL
Match: tr|K7MV75|K7MV75_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786452 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 8.2e-17
Identity = 85/263 (32.32%), Postives = 111/263 (42.21%), Query Frame = 0 

Query: 99  AQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTXXXXXXXXLY 158
           +QGLRDRRVRLSIEI+RKFFDLQDMLG+DKAS TLDWL T S+KAIKELT         +
Sbjct: 108 SQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVES-F 167

Query: 159 NFDSEFEA--------------HKSTLPKCSNKNVAFHNVLA--KESR---------XXX 218
            F S  E               H   L     K  A + V A  KESR         X  
Sbjct: 168 EFSSSSEGEVVSTIQQQDLQQQHGINLENGKLKEPAAYCVKAKMKESRXXXXXXXXXXTS 227

Query: 219 XXXXXXXXXXXXXXXXQQPLPEIFSHQFRSXXXXXXXXXXXXXXXXXXXXXXXXXXDQEN 278
                           ++  P   + Q  +                           +E+
Sbjct: 228 SKVLCNTSGEGKVQELKKKCPATENPQILNQLRSTLQPPHPQNVGGEVPRDDDFNVIEES 287

Query: 279 NIIGIMWKPSPM---------ITKGDIYYNNCNNFYFPSNLPPNWDINVDSFARPQSGFC 328
            +I    K + M         +   +   NN +   FP NL PNW+ N  + A  +S FC
Sbjct: 288 IVIRRKLKHTLMSSNIHHQNAVIPKEASVNNSDYHSFP-NLSPNWEAN--NGANGRSTFC 347

The following BLAST results are available for this feature:
BLAST of Carg05924 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959978.18.9e-11693.07transcription factor DICHOTOMA-like [Cucurbita moschata][more]
XP_022990778.14.9e-10682.99transcription factor DICHOTOMA-like [Cucurbita maxima][more]
XP_022133637.13.1e-6066.41transcription factor DICHOTOMA-like [Momordica charantia][more]
XP_011656282.11.3e-5058.57PREDICTED: transcription factor DICHOTOMA-like [Cucumis sativus] >KGN52575.1 hyp... [more]
BAS18996.18.5e-5058.06TCP transcription factor [Cucumis melo][more]
BLAST of Carg05924 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67260.16.7e-1783.67TCP family transcription factor [more]
AT1G68800.12.4e-1469.39TCP domain protein 12[more]
AT3G18550.11.2e-1058.70TCP family transcription factor [more]
AT1G53230.14.0e-0953.06TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3[more]
AT4G18390.11.5e-0851.02TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2[more]
BLAST of Carg05924 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FYG7|TCP1_ARATH1.2e-1583.67Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1[more]
sp|Q9SNW8|DICH_ANTMA1.0e-1465.63Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1[more]
sp|O49250|CYCLD_ANTMA3.9e-1479.59Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1[more]
sp|Q9SBV6|CYCLD_ANTML3.9e-1479.59Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ... [more]
sp|Q9SBV9|CYCLD_ANTMH5.1e-1477.55Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru... [more]
BLAST of Carg05924 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KSL1|A0A0A0KSL1_CUCSA8.6e-5158.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644520 PE=4 SV=1[more]
tr|A0A0K2RVY1|A0A0K2RVY1_CUCME5.6e-5058.06TCP transcription factor OS=Cucumis melo OX=3656 GN=CmTCP1 PE=4 SV=1[more]
tr|A0A2N9IZS9|A0A2N9IZS9_FAGSY2.5e-2133.69Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57960 PE=4 SV=1[more]
tr|V7B185|V7B185_PHAVU1.3e-1736.65Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G020400g PE=4 ... [more]
tr|K7MV75|K7MV75_SOYBN8.2e-1732.32Uncharacterized protein OS=Glycine max OX=3847 GN=100786452 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017887TF_TCP_subgr
IPR017888CYC/TB1_R_domain
IPR005333Transcription_factor_TCP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg05924-RACarg05924-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 88..170
e-value: 5.7E-36
score: 124.4
coord: 175..207
e-value: 0.0028
score: 18.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..234
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 70..328
NoneNo IPR availablePANTHERPTHR31072:SF18SUBFAMILY NOT NAMEDcoord: 70..328
NoneNo IPR availableSUPERFAMILYSSF101447Formin homology 2 domain (FH2 domain)coord: 30..39
IPR017888CYC/TB1, R domainPROSITEPS51370Rcoord: 187..204
score: 12.537
IPR017887Transcription factor TCP subgroupPROSITEPS51369TCPcoord: 89..147
score: 35.363

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg05924Cla016452Watermelon (97103) v1carwmB0025
Carg05924Csa5G644520Cucumber (Chinese Long) v2carcuB0021
Carg05924MELO3C022091Melon (DHL92) v3.5.1carmeB0018
Carg05924ClCG11G005380Watermelon (Charleston Gray)carwcgB0019
Carg05924CSPI05G30040Wild cucumber (PI 183967)carcpiB0022
Carg05924Cucsa.238090Cucumber (Gy14) v1carcgyB0024
Carg05924CmaCh04G028480Cucurbita maxima (Rimu)carcmaB0033
Carg05924CmaCh15G001890Cucurbita maxima (Rimu)carcmaB0030
Carg05924CmoCh04G029770Cucurbita moschata (Rifu)carcmoB0033
Carg05924CmoCh15G002020Cucurbita moschata (Rifu)carcmoB0031
Carg05924Lsi03G002320Bottle gourd (USVL1VR-Ls)carlsiB017
Carg05924Cp4.1LG13g07780Cucurbita pepo (Zucchini)carcpeB0031
Carg05924Cp4.1LG01g22120Cucurbita pepo (Zucchini)carcpeB0034
Carg05924CsGy5G029420Cucumber (Gy14) v2carcgybB0021
Carg05924MELO3C022091.2Melon (DHL92) v3.6.1carmedB0019
Carg05924CsaV3_5G039160Cucumber (Chinese Long) v3carcucB0022
Carg05924Cla97C11G212330Watermelon (97103) v2carwmbB0015
Carg05924Bhi06G000087Wax gourdcarwgoB0019
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg05924Carg02180Silver-seed gourdcarcarB020
The following block(s) are covering this gene:
GeneOrganismBlock
Carg05924Watermelon (Charleston Gray)carwcgB0026
Carg05924Watermelon (97103) v1carwmB0019
Carg05924Watermelon (97103) v2carwmbB0021
Carg05924Wax gourdcarwgoB0025
Carg05924Silver-seed gourdcarcarB021
Carg05924Silver-seed gourdcarcarB024
Carg05924Cucumber (Gy14) v2carcgybB0019
Carg05924Cucumber (Gy14) v1carcgyB0018
Carg05924Cucumber (Gy14) v1carcgyB0023
Carg05924Cucurbita maxima (Rimu)carcmaB0032
Carg05924Cucurbita moschata (Rifu)carcmoB0032
Carg05924Cucurbita moschata (Rifu)carcmoB0035
Carg05924Cucurbita pepo (Zucchini)carcpeB0030
Carg05924Wild cucumber (PI 183967)carcpiB0020
Carg05924Cucumber (Chinese Long) v2carcuB0020
Carg05924Cucumber (Chinese Long) v2carcuB0022
Carg05924Cucumber (Chinese Long) v3carcucB0020
Carg05924Cucumber (Chinese Long) v3carcucB0023
Carg05924Bottle gourd (USVL1VR-Ls)carlsiB015
Carg05924Melon (DHL92) v3.5.1carmeB0016
Carg05924Melon (DHL92) v3.5.1carmeB0017
Carg05924Melon (DHL92) v3.6.1carmedB0018