Cp4.1LG01g21300 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g21300
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLow affinity potassium transport system protein kup isoform 1
LocationCp4.1LG01 : 17949368 .. 17951892 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTCTTCTTCTTCTTTTATTCTTTAAGATATTCTCTGCTCTCTCTCCCAATTCCTCGGTGATTCTTACCTCTACTGCCATTTTCACCAGAATAATCGGCAGAGTTTCGGGAGTGAACTCGGCGGCTCTGACGATTTTGTTGCGTTATTCTTTCTCTCTCTGTCACATCTGGTTCGAATCTGCAGTCAGGTACAGCCACACTTTTCTCCTTCTCTGTTCGATGTCATTTTTGTGTACCCGAGGAATCGAATTGAATGGATCGTTCATTCTTCGAATTTGTGTTTGTTTCGAAGAATGTGAAACCTCATTTTGCTAAGAGTTGTTTGGTAATTTGTAGTGGTCTTCTGAAGTGGAAGTAATTTGTAGATTTCTGAAATGGTTGTATACTTATCTGCATTTAACAGAGCGTAATGGCCAGTGAGAGGCTCGTTTGAATTGTTAATTTTTGTTTGAAACGATTCTTGATTTTTGCGCAGGAGATTGTAGATTTCAATTCATTATCCGAGTTTTTGGATCGTTTAGGAGTTTCGGAGAAAGCAGAAAGTTATATCTTATCGAGTTTCGTGAAGATTAGAATAACGGCGGGAGATTCTTCGCATGTGGTCCGGTAGTAGTAGCTCTCTGTTTCCTCTTTCACGAATTAATTTCATCTACTCCTATTATTTATTAGTTTGCCTGTCATTTTCTTTCTTTACTTTTTGGCTGCAATGAAATTGTTCCGATTTTCTGTTTCAATAATGTTGATGATTTGAACATTCTCTTAACCATGTGAAATCGCCACTGGATCCATAGCAGTGGTTAGATTTCAATAATAGAGAATATTGAAGTTTTTCCATAGCCTCCAGTTTTGAAATTTGGAGAACTTGTCGGAGAGGTAGAGAAAATTCTGCGTTTAAAATGTCGAGAATGCTATTTTCATATCATGATTTTATCTGATTCTGTCTTCTTACTTCGATTCTTTTTAGCAGATTGTTTGGCGATATCTTTGTAGGGTAATTTATGACTGAAAATGGCATCACGATGTTGAATAATCTTTTGTTGAAGTGTAGATTTCGTAGGACTTTGTTGCTTGTGTTTATGCTTTTAGTTTGTATTGTTCTAAACTACAGGCAACCTGGCACGGATTAGTAGAAAGAAATTTCAACATCTGAGGTCGAGCTTACGAGCAGAAGAACACTTCGATGGTGATAGGTACAATGAACATTTTGATTCTGAGTTATAGATGGATGAATGGGAGGGGTACTCATATATTCTGAGTAGGGATTGTTGTTGACATTCTTTTTGGGCTCCCAGATGAACACAACTGATGTTATTGCTAGTAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCCGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTGTGAAGAAAGCAGCCAGTACACAGCGTCAAGATAGTTCAAAAACATCTCCTCTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCTTCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGGTATGAAAACTTCAATTTTTTGAAATCCCATTTTTAGAAGAATCATAATTTATGAAGCTTGTGAAATATTGCATGTTCGTGTTCCATGCATTCTTTTTGAACAATGTTCATCACATCATTCTTTTTTAACAATGGAAAATTTTAAGTTTTCATAGTGACACTAATATGCTGCAACCTTGCCCTCTGTAAAGCCTAATTCACACGTGACCCCATTGTCTCCACCCGTAGGAACTACGAGATCACCTCATAGACGTCTTCGATATCCAAGGGTCGTGGAACGACCATAGAACCCTGTCCAATAAGTAGAACACATCAGATTGCAGTTATTTTTTAGAAATAGTTCTTCTTCGTGCAATCATGTTTTAAAAATAACTTAAAACGCCCTTCTAGCTTGAAAATATACAAATCATACTGTTTTGTCTATTGACCTTAGATCGAATTCATACTACAGATGAAATTCTTGGCGTAGTATAACCAAAAACCTAACCCTATTGCTCAGAATTTGCTGATTTTATCCCATCAAAGTTTGTATTTCTGATCAGTTTGAATCCTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATATTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAA

mRNA sequence

TTTTTTTTTCTTCTTCTTCTTTTATTCTTTAAGATATTCTCTGCTCTCTCTCCCAATTCCTCGGTGATTCTTACCTCTACTGCCATTTTCACCAGAATAATCGGCAGAGTTTCGGGAGTGAACTCGGCGGCTCTGACGATTTTGTTGCGTTATTCTTTCTCTCTCTGTCACATCTGGTTCGAATCTGCAGTCAGGAGATTGTAGATTTCAATTCATTATCCGAGTTTTTGGATCGTTTAGGAGTTTCGGAGAAAGCAGAAAGTTATATCTTATCGAGTTTCGTGAAGATTAGAATAACGGCGGGAGATTCTTCGCATGTGGTCCGGCAACCTGGCACGGATTAGTAGAAAGAAATTTCAACATCTGAGGTCGAGCTTACGAGCAGAAGAACACTTCGATGGTGATAGATGAACACAACTGATGTTATTGCTAGTAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCCGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTGTGAAGAAAGCAGCCAGTACACAGCGTCAAGATAGTTCAAAAACATCTCCTCTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCTTCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTTTGAATCCTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATATTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAA

Coding sequence (CDS)

ATGTTATTGCTAGTAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCCGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTGTGAAGAAAGCAGCCAGTACACAGCGTCAAGATAGTTCAAAAACATCTCCTCTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCTTCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTTTGAATCCTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATATTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAA

Protein sequence

MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLNELASTKTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSDNGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIGKRRCLCSIM
Homology
[Close]
BLAST of Cp4.1LG01g21300 vs. TrEMBL
Match: A0A0A0K9H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055390 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.1e-77
Identity = 164/225 (72.89%), Postives = 181/225 (80.44%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLN-ELASTKTWI 60
           MLL +EGGGFFSSSASGYSSSL+LL LGQKSE K MRVLPLL+DR+PD+N +LASTKTWI
Sbjct: 122 MLLALEGGGFFSSSASGYSSSLSLLLLGQKSEDKSMRVLPLLVDRDPDVNIQLASTKTWI 181

Query: 61  SWRCASSSLR-CFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSDNGK 120
           SWRCAS S R CFRHNPAGP +               +KK A+TQRQDS +TSP+SDNGK
Sbjct: 182 SWRCASPSFRRCFRHNPAGPTTP------------PPLKKPATTQRQDSLRTSPISDNGK 241

Query: 121 NQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWI 180
           N V SS+++NLA KMVLKSSLKK SDA + SV NADGNEA GGKGSCDSSHVERRKVQW 
Sbjct: 242 NHVPSSDEDNLARKMVLKSSLKKTSDANIDSVRNADGNEATGGKGSCDSSHVERRKVQWT 301

Query: 181 DTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIGKRRCLCSIM 224
           DTCGS+LAEVKEFEPS        EIN SDDEND+GKRRCLCSIM
Sbjct: 302 DTCGSQLAEVKEFEPS--------EINASDDENDMGKRRCLCSIM 326

[Close]
BLAST of Cp4.1LG01g21300 vs. TrEMBL
Match: M5VLH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011559mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.4e-35
Identity = 112/229 (48.91%), Postives = 138/229 (60.26%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL VEGGGFFSSSASGYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLALLLLGQKNEDKPMRVSPWNQYQLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD+   S +SD
Sbjct: 61  KDRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDNLPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D++ + K+VLKSSLKK S  T VSV +A+  EAL    S    + ERRKV
Sbjct: 121 KGKDHTADTDDDHNSIKVVLKSSLKKPSKRTPVSVESANEREALSETCSDTPDNAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIG-KRRCLCSIM 224
           QW DTCGSEL E++EFEP        SE++ SDDE D G +R C C IM
Sbjct: 181 QWTDTCGSELVEIREFEP--------SELDGSDDEFDNGNERSCSCVIM 206

[Close]
BLAST of Cp4.1LG01g21300 vs. TrEMBL
Match: U5GKT5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s06550g PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-32
Identity = 109/229 (47.60%), Postives = 129/229 (56.33%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL VEGGGFFSSSASGYS  LTLL LGQK E KPMRV P     L+D+EPD + +LAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQKHEDKPMRVTPWNQYQLVDQEPDSDLQLASL 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSD 120
           K  +S  CAS    CF    A  + S LK     GP           Q+QD      ++D
Sbjct: 61  KNRLSHGCAS--FICFGRASAHESPSPLK----VGP----------AQQQDVLPDPLVAD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
             K+       +N A K+ LKS+LKKAS    V V +   +E L G+GS    H ERRKV
Sbjct: 121 REKDLTTELEVDNYARKITLKSNLKKASKRIPVPVEDVKQSEPLNGQGSDIPGHTERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIG-KRRCLCSIM 224
           QW D CGSELAE++EFEP        SE   SDDE + G +R C C IM
Sbjct: 181 QWTDVCGSELAEIREFEP--------SETGGSDDEFENGNERSCSCVIM 205

[Close]
BLAST of Cp4.1LG01g21300 vs. TrEMBL
Match: B9SEB0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0961490 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-32
Identity = 106/229 (46.29%), Postives = 129/229 (56.33%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL VEGGGFFSSSASGYS  LTLL LGQ+ E KPMRV P     L++ EPD + +LAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQRHEDKPMRVAPWNQYQLVENEPDPDLQLASL 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSD 120
           K  +S  CAS    CF    AG +S    K  PA             Q+QD      ++D
Sbjct: 61  KNRLSRGCAS--FVCFGRASAGLDSPSPLKVGPA-------------QQQDVLPDPLVAD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
             K+       +N   +++LKSSLKK +++  V V NA+ +  LG KGS    H ERRKV
Sbjct: 121 KDKDNTTELEGDNNVRRVMLKSSLKKPTNSIPVPVENANQHNTLGEKGSNIPGHAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDEND-IGKRRCLCSIM 224
           QW D CGSELAE++EFEP        SE   SDDE D   +R C C IM
Sbjct: 181 QWTDVCGSELAEIREFEP--------SETAGSDDEFDNAAERSCSCVIM 206

[Close]
BLAST of Cp4.1LG01g21300 vs. TrEMBL
Match: A0A067KXI8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08331 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.3e-32
Identity = 106/229 (46.29%), Postives = 132/229 (57.64%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL VEGGGFFSSSASGYS  LTLL LGQK E KPMRV P     L++ EPD + +LAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQKHEDKPMRVSPWNQYQLVENEPDPDLQLASL 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSD 120
           K  +S  CAS    CF    AG +SS   K  PA             Q+QD      ++D
Sbjct: 61  KNRLSRGCAS--FVCFGRASAGLDSSSPLKVGPA-------------QQQDVLPDPLVTD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+        + A ++ LKSSLKK S++    V + + ++ALG KG+    H E+RKV
Sbjct: 121 KGKDGTTEIEVNSNARRVNLKSSLKKRSNSVPSPVDDGNQHDALGDKGTDIRGHTEKRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIG-KRRCLCSIM 224
           QW D CGSELAE++EFEP        SE  +SDDE + G +R C C IM
Sbjct: 181 QWTDVCGSELAEIREFEP--------SETGLSDDEFENGNERSCSCVIM 206

[Close]
BLAST of Cp4.1LG01g21300 vs. TAIR10
Match: AT1G22790.1 (AT1G22790.1 unknown protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-26
Identity = 94/235 (40.00%), Postives = 132/235 (56.17%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLP----LLLDREPDLN---ELA 60
           MLL VEGGG FS+SASGYS  LTLLF G K   +PMRV+P     ++D+EP+ +   +L 
Sbjct: 1   MLLAVEGGGLFSASASGYSKGLTLLFSGDKDVDRPMRVVPWNHYQVVDQEPEADPVLQLD 60

Query: 61  STKTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTS-- 120
           S K  +S  CA +S  CF    AG  +          P+   V+      R+ SS  S  
Sbjct: 61  SIKNRVSRGCA-ASFSCFGGASAGLET----------PSPLKVEPVQQQHREISSPESVV 120

Query: 121 PLSDNGKNQVLSSND--ENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSH 180
            +S+ GK+Q+  +++     A K+ L+SSLK+ S A   S+ +    E L   GS  +  
Sbjct: 121 VVSEKGKDQISEADNGSSKEAFKLSLRSSLKRPSVAESRSLEDIKEYETLSVDGSDLTGD 180

Query: 181 VERRKVQWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIGKRR-CLCSIM 224
           + RRKVQW D CGSEL +V+EFEP        SE+ +SD+E ++G++R C C IM
Sbjct: 181 MARRKVQWPDACGSELTQVREFEP--------SEMGLSDEEWEVGRQRTCSCVIM 216

[Close]
BLAST of Cp4.1LG01g21300 vs. TAIR10
Match: AT1G34010.1 (AT1G34010.1 unknown protein)

HSP 1 Score: 77.8 bits (190), Expect = 9.4e-15
Identity = 75/228 (32.89%), Postives = 112/228 (49.12%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLNELASTKTWIS 60
           ML   EGGGFFSSSASGYS+ L L                LLL ++ +   +  +  W  
Sbjct: 1   MLFAAEGGGFFSSSASGYSNGLAL----------------LLLGQKTEQKPIKVSSQWNH 60

Query: 61  WRCA-SSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSDNGKN 120
           +      S   FR + +        K+  +   +S++     ++R +S       +  K+
Sbjct: 61  YHLVLEDSDTGFRLDSS--------KNWLSSACTSLICFGRKSERLES-------EGKKD 120

Query: 121 QVLSSNDEN---LASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKVQ 180
           +  S  D N   + ++  LKSSLKK S + VV      G++ +   G  D  H++RRKVQ
Sbjct: 121 EAPSVEDYNNCEVTNRFALKSSLKKRSFSDVVI-----GDDDVSRDGVVD--HIDRRKVQ 180

Query: 181 WIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIGK-RRCLCSIM 224
           W DTCG E+AEV+EFEP        SE++ S+DE   G  + C+C+IM
Sbjct: 181 WPDTCGIEIAEVREFEP--------SEVDESEDEFHHGSGKSCMCTIM 182

[Close]
BLAST of Cp4.1LG01g21300 vs. NCBI nr
Match: gi|449446397|ref|XP_004140958.1| (PREDICTED: uncharacterized protein LOC101221691 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-77
Identity = 164/225 (72.89%), Postives = 181/225 (80.44%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLN-ELASTKTWI 60
           MLL +EGGGFFSSSASGYSSSL+LL LGQKSE K MRVLPLL+DR+PD+N +LASTKTWI
Sbjct: 1   MLLALEGGGFFSSSASGYSSSLSLLLLGQKSEDKSMRVLPLLVDRDPDVNIQLASTKTWI 60

Query: 61  SWRCASSSLR-CFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSDNGK 120
           SWRCAS S R CFRHNPAGP +               +KK A+TQRQDS +TSP+SDNGK
Sbjct: 61  SWRCASPSFRRCFRHNPAGPTTP------------PPLKKPATTQRQDSLRTSPISDNGK 120

Query: 121 NQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWI 180
           N V SS+++NLA KMVLKSSLKK SDA + SV NADGNEA GGKGSCDSSHVERRKVQW 
Sbjct: 121 NHVPSSDEDNLARKMVLKSSLKKTSDANIDSVRNADGNEATGGKGSCDSSHVERRKVQWT 180

Query: 181 DTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIGKRRCLCSIM 224
           DTCGS+LAEVKEFEPS        EIN SDDEND+GKRRCLCSIM
Sbjct: 181 DTCGSQLAEVKEFEPS--------EINASDDENDMGKRRCLCSIM 205

[Close]
BLAST of Cp4.1LG01g21300 vs. NCBI nr
Match: gi|700190914|gb|KGN46118.1| (hypothetical protein Csa_6G055390 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 1.6e-77
Identity = 164/225 (72.89%), Postives = 181/225 (80.44%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLN-ELASTKTWI 60
           MLL +EGGGFFSSSASGYSSSL+LL LGQKSE K MRVLPLL+DR+PD+N +LASTKTWI
Sbjct: 122 MLLALEGGGFFSSSASGYSSSLSLLLLGQKSEDKSMRVLPLLVDRDPDVNIQLASTKTWI 181

Query: 61  SWRCASSSLR-CFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSDNGK 120
           SWRCAS S R CFRHNPAGP +               +KK A+TQRQDS +TSP+SDNGK
Sbjct: 182 SWRCASPSFRRCFRHNPAGPTTP------------PPLKKPATTQRQDSLRTSPISDNGK 241

Query: 121 NQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWI 180
           N V SS+++NLA KMVLKSSLKK SDA + SV NADGNEA GGKGSCDSSHVERRKVQW 
Sbjct: 242 NHVPSSDEDNLARKMVLKSSLKKTSDANIDSVRNADGNEATGGKGSCDSSHVERRKVQWT 301

Query: 181 DTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIGKRRCLCSIM 224
           DTCGS+LAEVKEFEPS        EIN SDDEND+GKRRCLCSIM
Sbjct: 302 DTCGSQLAEVKEFEPS--------EINASDDENDMGKRRCLCSIM 326

[Close]
BLAST of Cp4.1LG01g21300 vs. NCBI nr
Match: gi|595793567|ref|XP_007200532.1| (hypothetical protein PRUPE_ppa011559mg [Prunus persica])

HSP 1 Score: 156.0 bits (393), Expect = 7.7e-35
Identity = 112/229 (48.91%), Postives = 138/229 (60.26%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL VEGGGFFSSSASGYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLALLLLGQKNEDKPMRVSPWNQYQLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD+   S +SD
Sbjct: 61  KDRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDNLPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D++ + K+VLKSSLKK S  T VSV +A+  EAL    S    + ERRKV
Sbjct: 121 KGKDHTADTDDDHNSIKVVLKSSLKKPSKRTPVSVESANEREALSETCSDTPDNAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIG-KRRCLCSIM 224
           QW DTCGSEL E++EFEP        SE++ SDDE D G +R C C IM
Sbjct: 181 QWTDTCGSELVEIREFEP--------SELDGSDDEFDNGNERSCSCVIM 206

[Close]
BLAST of Cp4.1LG01g21300 vs. NCBI nr
Match: gi|645264000|ref|XP_008237489.1| (PREDICTED: uncharacterized protein LOC103336225 [Prunus mume])

HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34
Identity = 112/229 (48.91%), Postives = 137/229 (59.83%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL VEGGGFFSSSASGYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLALLLLGQKNEDKPMRVSPWNQYQLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD    S +SD
Sbjct: 61  KDRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDILPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D++ + K+VLKSSLKK S  T VSV +A+  EAL    S    + ERRKV
Sbjct: 121 KGKDHTADTDDDHNSIKVVLKSSLKKPSKRTPVSVESANEREALSETCSDTPDNAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIG-KRRCLCSIM 224
           QW DTCGSEL E++EFEP        SE++ SDDE D G +R C C IM
Sbjct: 181 QWTDTCGSELVEIREFEP--------SELDGSDDEFDNGNERSCSCVIM 206

[Close]
BLAST of Cp4.1LG01g21300 vs. NCBI nr
Match: gi|657979780|ref|XP_008381860.1| (PREDICTED: uncharacterized protein LOC103444685 [Malus domestica])

HSP 1 Score: 154.5 bits (389), Expect = 2.2e-34
Identity = 109/229 (47.60%), Postives = 136/229 (59.39%), Query Frame = 1 

Query: 1   MLLLVEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           ML  VEGGGFFSSSA+GYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLFAVEGGGFFSSSAAGYSKGLALLLLGQKNEDKPMRVSPWNQYRLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSIVKKAASTQRQDSSKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD    S +SD
Sbjct: 61  KNRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDILPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKASDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D+++A K+VLKSSLK+ S  T VSV +A+  EAL   GS    HVERRKV
Sbjct: 121 KGKDHTAGADDDHIARKVVLKSSLKRPSKRTPVSVESANEREALSEPGSDIPGHVERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSLNPNPECSEINVSDDENDIG-KRRCLCSIM 224
           QW D CGSEL E++EFEP        SE + SDD  D G ++ C C +M
Sbjct: 181 QWTDVCGSELVEIREFEP--------SETDGSDDGFDDGNEKSCSCVVM 206

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g21300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g21300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9H6_CUCSA1.1e-7772.89Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055390 PE=4 SV=1[more]
M5VLH2_PRUPE5.4e-3548.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011559mg PE=4 SV=1[more]
U5GKT5_POPTR3.3e-3247.60Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s06550g PE=4 SV=1[more]
B9SEB0_RICCO7.3e-3246.29Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0961490 PE=4 SV=1[more]
A0A067KXI8_JATCU7.3e-3246.29Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08331 PE=4 SV=1[more]
BLAST of Cp4.1LG01g21300 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22790.11.8e-2640.00 unknown protein[more]
AT1G34010.19.4e-1532.89 unknown protein[more]
BLAST of Cp4.1LG01g21300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446397|ref|XP_004140958.1|1.6e-7772.89PREDICTED: uncharacterized protein LOC101221691 [Cucumis sativus][more]
gi|700190914|gb|KGN46118.1|1.6e-7772.89hypothetical protein Csa_6G055390 [Cucumis sativus][more]
gi|595793567|ref|XP_007200532.1|7.7e-3548.91hypothetical protein PRUPE_ppa011559mg [Prunus persica][more]
gi|645264000|ref|XP_008237489.1|1.7e-3448.91PREDICTED: uncharacterized protein LOC103336225 [Prunus mume][more]
gi|657979780|ref|XP_008381860.1|2.2e-3447.60PREDICTED: uncharacterized protein LOC103444685 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009642 response to light intensity
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g21300.1Cp4.1LG01g21300.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33401FAMILY NOT NAMEDcoord: 2..80
score: 1.1E-57coord: 97..223
score: 1.1
NoneNo IPR availablePANTHERPTHR33401:SF3SUBFAMILY NOT NAMEDcoord: 97..223
score: 1.1E-57coord: 2..80
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g21300Cucsa.363890Cucumber (Gy14) v1cgycpeB0961
Cp4.1LG01g21300CmaCh15G005810Cucurbita maxima (Rimu)cmacpeB318
Cp4.1LG01g21300CmaCh04G024580Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g21300CmoCh04G025730Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g21300CmoCh15G005880Cucurbita moschata (Rifu)cmocpeB280
Cp4.1LG01g21300Cla013780Watermelon (97103) v1cpewmB396
Cp4.1LG01g21300Csa6G055390Cucumber (Chinese Long) v2cpecuB459
Cp4.1LG01g21300MELO3C008326Melon (DHL92) v3.5.1cpemeB401
Cp4.1LG01g21300ClCG08G007400Watermelon (Charleston Gray)cpewcgB419
Cp4.1LG01g21300CSPI06G04720Wild cucumber (PI 183967)cpecpiB460
Cp4.1LG01g21300Lsi08G005700Bottle gourd (USVL1VR-Ls)cpelsiB382
Cp4.1LG01g21300MELO3C008326.2Melon (DHL92) v3.6.1cpemedB468
Cp4.1LG01g21300CsaV3_6G005040Cucumber (Chinese Long) v3cpecucB0568
Cp4.1LG01g21300Bhi04G001349Wax gourdcpewgoB0533
Cp4.1LG01g21300CsGy6G004660Cucumber (Gy14) v2cgybcpeB797
Cp4.1LG01g21300Carg01616Silver-seed gourdcarcpeB1158
Cp4.1LG01g21300Carg15801Silver-seed gourdcarcpeB0096
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g21300Cp4.1LG13g03840Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g21300Cucurbita pepo (Zucchini)cpecpeB404
Cp4.1LG01g21300Cucumber (Gy14) v1cgycpeB0136
Cp4.1LG01g21300Cucurbita moschata (Rifu)cmocpeB014
Cp4.1LG01g21300Cucumber (Chinese Long) v2cpecuB473
Cp4.1LG01g21300Bottle gourd (USVL1VR-Ls)cpelsiB338
Cp4.1LG01g21300Watermelon (Charleston Gray)cpewcgB415
Cp4.1LG01g21300Watermelon (Charleston Gray)cpewcgB417
Cp4.1LG01g21300Watermelon (97103) v1cpewmB393
Cp4.1LG01g21300Watermelon (97103) v1cpewmB395
Cp4.1LG01g21300Cucumber (Gy14) v2cgybcpeB943
Cp4.1LG01g21300Cucumber (Chinese Long) v3cpecucB0572
Cp4.1LG01g21300Cucumber (Chinese Long) v3cpecucB0584