CmoCh04G025730 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G025730
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Low affinity potassium transport system protein kup isoform 1
Location	Cmo_Chr04 : 18829104 .. 18830833 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATTGTTAGCAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCACTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGGTATGAAAACTTTAATTTTTTGAAATCCCATTTTTAGAAGAATCATAATTTATGAAGCTTGTGAAATATTGCATGTTCGTGTTCCATGCTTTCTTTTTGAACAATGTTCGTCACATCATTCTTTTTGAACAATGGAAAATTTTAAGTTTTCATAGTGACACTAATATGCTGCAACCTTGCCCTCTGTAAAGCCTAATTCACACATGACCCCATCGTCTCCACCCGTAGGAACTACGAGATCACCTCATAAACGCCTTCGATATCCAGGGGTCGTGGAACGACCATAGAACCCTGTTCAATAAATAGAACGCATTAGATTGCAGTTATTTTTTAGAAATAGTTCTTCTTCGTGCAGATCATATTCTCATGTTTTAAAAACAACTTAAAACACCCTTCTAGCTTGAAAATATACAAATCATACTGTTTTGTCTATTGACCTTAGATCGAATTCATACTACAGATGAAATTCTTGGCGTAGTATAACCAAAAACCTAACCCTATTTCTCAGAATTTGCTGATTGTATCCCATCTAAGTTTGTATTTCTGATCAGTTTGAATCTTAATCCCGAATGCAGTGAAATAAATGTATCGGACGATGAAAATGATTTTGGAAAAAGGAGGTGTTTATGCAGTATCATGTAATTCAAACCCCATTTTTACCATTGATGATGTGTGCTCTAGATCCTCAAAAATCTGCCGACTCGAATCAGATCAACTTGTTCGCTCAAGATTTTTTTTCATGATAGAGGAAGCTTTGTCAGCAATTTTAGACAAAAACAGAAACCAACCAGGAATTCTGCTGGTTCCCATGTTCTTCGCGATGATCACCTATCCACGGTAGTGCTGGTTTCAGTAAGTTTCTTTTTTCGCATGGATGGATGAGTTTCACTTTTCAGCACTTTTTGTTGCTTTTTCACTGTATTTTCCATATTTCTTCGTTACTATTTACTCTATGAACAATTTTTTGGGGATATTTACTGTTGGGTATTCAAAAGGAAGCTTTTGATTAGGCTTTGATTGGTTGAGATTAGGATGATATTAAGATGAACTCTGTTTTGTTGATTCAATGCTCTGTTTGTGGAAATGTTTTTGGGGTTAAAAATGGAAGAGTGGGCAGCCGAAGTCTTGTTCATTTCAGCTTGAAATTAT

mRNA sequence

ATGTTATTGTTAGCAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCACTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTGAAATAAATGTATCGGACGATGAAAATGATTTTGGAAAAAGGAGATCCTCAAAAATCTGCCGACTCGAATCAGATCAACTTGTTCGCTCAAGATTTTTTTTCATGATAGAGGAAGCTTTGTCAGCAATTTTAGACAAAAACAGAAACCAACCAGGAATTCTGCTGGTTCCCATGTTCTTCGCGATGATCACCTATCCACGGTAGTGCTGGTTTCAGTAAGTTTCTTTTTTCGCATGGATGGATGAGTTTCACTTTTCAGCACTTTTTGTTGCTTTTTCACTGTATTTTCCATATTTCTTCGTTACTATTTACTCTATGAACAATTTTTTGGGGATATTTACTGTTGGGTATTCAAAAGGAAGCTTTTGATTAGGCTTTGATTGGTTGAGATTAGGATGATATTAAGATGAACTCTGTTTTGTTGATTCAATGCTCTGTTTGTGGAAATGTTTTTGGGGTTAAAAATGGAAGAGTGGGCAGCCGAAGTCTTGTTCATTTCAGCTTGAAATTAT

Coding sequence (CDS)

ATGTTATTGTTAGCAGAAGGCGGAGGGTTCTTTTCTTCTTCAGCTTCTGGTTATAGCAGTAGCTTGACCCTTCTTTTCTTGGGTCAGAAGAGCGAAGTTAAACCCATGAGAGTTTTGCCATTGTTGTTGGACCGAGAGCCTGACCTTAACGAGCTGGCTTCGACAAAGACGTGGATTTCCTGGAGGTGTGCCTCCTCCTCCTTACGCTGCTTTCGCCATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGATAATCCAGCAGGGCCAAATTCATCTATTTTGAAGAAAGCAGCCAGTACACAACGCCAAGATAGTTTAAAAACATCTCCACTTTCTGATAATGGCAAGAATCAAGTTCTTAGTTCAAATGATGAGAATCTTGCAAGCAAAATGGTGCTTAAAAGTAGCTTGAAAAAAGCACCAGATGCTACTGTAGTTTCTGTTGGGAATGCTGATGGAAATGAAGCATTGGGAGGAAAGGGTAGTTGTGATTCCAGTCATGTAGAAAGAAGGAAAGTGCAGTGGATAGATACTTGTGGAAGCGAGCTTGCTGAAGTCAAAGAATTTGAACCAAGTGAAATAAATGTATCGGACGATGAAAATGATTTTGGAAAAAGGAGATCCTCAAAAATCTGCCGACTCGAATCAGATCAACTTGTTCGCTCAAGATTTTTTTTCATGATAGAGGAAGCTTTGTCAGCAATTTTAGACAAAAACAGAAACCAACCAGGAATTCTGCTGGTTCCCATGTTCTTCGCGATGATCACCTATCCACGGTAG

Homology

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BLAST of CmoCh04G025730 vs. TrEMBL
Match: A0A0A0K9H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055390 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.3e-76
Identity = 159/211 (75.36%), Postives = 173/211 (81.99%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLN-ELASTKTWI 60
           MLL  EGGGFFSSSASGYSSSL+LL LGQKSE K MRVLPLL+DR+PD+N +LASTKTWI
Sbjct: 122 MLLALEGGGFFSSSASGYSSSLSLLLLGQKSEDKSMRVLPLLVDRDPDVNIQLASTKTWI 181

Query: 61  SWRCASSSLR-CFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSDNGK 120
           SWRCAS S R CFRHNPAGP +               LKK A+TQRQDSL+TSP+SDNGK
Sbjct: 182 SWRCASPSFRRCFRHNPAGPTTP------------PPLKKPATTQRQDSLRTSPISDNGK 241

Query: 121 NQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWI 180
           N V SS+++NLA KMVLKSSLKK  DA + SV NADGNEA GGKGSCDSSHVERRKVQW 
Sbjct: 242 NHVPSSDEDNLARKMVLKSSLKKTSDANIDSVRNADGNEATGGKGSCDSSHVERRKVQWT 301

Query: 181 DTCGSELAEVKEFEPSEINVSDDENDFGKRR 210
           DTCGS+LAEVKEFEPSEIN SDDEND GKRR
Sbjct: 302 DTCGSQLAEVKEFEPSEINASDDENDMGKRR 320

[Close]

BLAST of CmoCh04G025730 vs. TrEMBL
Match: M5VLH2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011559mg PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.3e-36
Identity = 108/215 (50.23%), Postives = 133/215 (61.86%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL  EGGGFFSSSASGYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLALLLLGQKNEDKPMRVSPWNQYQLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD+L  S +SD
Sbjct: 61  KDRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDNLPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D++ + K+VLKSSLKK    T VSV +A+  EAL    S    + ERRKV
Sbjct: 121 KGKDHTADTDDDHNSIKVVLKSSLKKPSKRTPVSVESANEREALSETCSDTPDNAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           QW DTCGSEL E++EFEPSE++ SDDE D G  RS
Sbjct: 181 QWTDTCGSELVEIREFEPSELDGSDDEFDNGNERS 200

[Close]

BLAST of CmoCh04G025730 vs. TrEMBL
Match: U5GKT5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s06550g PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 105/215 (48.84%), Postives = 124/215 (57.67%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL  EGGGFFSSSASGYS  LTLL LGQK E KPMRV P     L+D+EPD + +LAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQKHEDKPMRVTPWNQYQLVDQEPDSDLQLASL 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSD 120
           K  +S  CAS    CF    A  + S LK     GP           Q+QD L    ++D
Sbjct: 61  KNRLSHGCAS--FICFGRASAHESPSPLK----VGP----------AQQQDVLPDPLVAD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
             K+       +N A K+ LKS+LKKA     V V +   +E L G+GS    H ERRKV
Sbjct: 121 REKDLTTELEVDNYARKITLKSNLKKASKRIPVPVEDVKQSEPLNGQGSDIPGHTERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           QW D CGSELAE++EFEPSE   SDDE + G  RS
Sbjct: 181 QWTDVCGSELAEIREFEPSETGGSDDEFENGNERS 199

[Close]

BLAST of CmoCh04G025730 vs. TrEMBL
Match: B9SEB0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0961490 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 103/215 (47.91%), Postives = 124/215 (57.67%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL  EGGGFFSSSASGYS  LTLL LGQ+ E KPMRV P     L++ EPD + +LAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQRHEDKPMRVAPWNQYQLVENEPDPDLQLASL 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSD 120
           K  +S  CAS    CF    AG +S    K  PA             Q+QD L    ++D
Sbjct: 61  KNRLSRGCAS--FVCFGRASAGLDSPSPLKVGPA-------------QQQDVLPDPLVAD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
             K+       +N   +++LKSSLKK  ++  V V NA+ +  LG KGS    H ERRKV
Sbjct: 121 KDKDNTTELEGDNNVRRVMLKSSLKKPTNSIPVPVENANQHNTLGEKGSNIPGHAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           QW D CGSELAE++EFEPSE   SDDE D    RS
Sbjct: 181 QWTDVCGSELAEIREFEPSETAGSDDEFDNAAERS 200

[Close]

BLAST of CmoCh04G025730 vs. TrEMBL
Match: A0A067KXI8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08331 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 101/215 (46.98%), Postives = 126/215 (58.60%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL  EGGGFFSSSASGYS  LTLL LGQK E KPMRV P     L++ EPD + +LAS 
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLTLLLLGQKHEDKPMRVSPWNQYQLVENEPDPDLQLASL 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSD 120
           K  +S  CAS    CF    AG +SS   K  P              Q+QD L    ++D
Sbjct: 61  KNRLSRGCAS--FVCFGRASAGLDSSSPLKVGP-------------AQQQDVLPDPLVTD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+        + A ++ LKSSLKK  ++    V + + ++ALG KG+    H E+RKV
Sbjct: 121 KGKDGTTEIEVNSNARRVNLKSSLKKRSNSVPSPVDDGNQHDALGDKGTDIRGHTEKRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           QW D CGSELAE++EFEPSE  +SDDE + G  RS
Sbjct: 181 QWTDVCGSELAEIREFEPSETGLSDDEFENGNERS 200

[Close]

BLAST of CmoCh04G025730 vs. TAIR10
Match: AT1G22790.1 (AT1G22790.1 unknown protein)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-26
Identity = 89/224 (39.73%), Postives = 128/224 (57.14%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN---ELA 60
           MLL  EGGG FS+SASGYS  LTLLF G K   +PMRV+P     ++D+EP+ +   +L 
Sbjct: 1   MLLAVEGGGLFSASASGYSKGLTLLFSGDKDVDRPMRVVPWNHYQVVDQEPEADPVLQLD 60

Query: 61  STKTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSP- 120
           S K  +S  CA+S   CF    AG     L+  +P         K    Q+Q    +SP 
Sbjct: 61  SIKNRVSRGCAAS-FSCFGGASAG-----LETPSPL--------KVEPVQQQHREISSPE 120

Query: 121 ----LSDNGKNQVLSSNDENL--ASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCD 180
               +S+ GK+Q+  +++ +   A K+ L+SSLK+   A   S+ +    E L   GS  
Sbjct: 121 SVVVVSEKGKDQISEADNGSSKEAFKLSLRSSLKRPSVAESRSLEDIKEYETLSVDGSDL 180

Query: 181 SSHVERRKVQWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           +  + RRKVQW D CGSEL +V+EFEPSE+ +SD+E + G++R+
Sbjct: 181 TGDMARRKVQWPDACGSELTQVREFEPSEMGLSDEEWEVGRQRT 210

[Close]

BLAST of CmoCh04G025730 vs. TAIR10
Match: AT1G34010.1 (AT1G34010.1 unknown protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 71/218 (32.57%), Postives = 103/218 (47.25%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLNELASTKTWIS 60
           ML  AEGGGFFSSSASGYS+ L L                LLL ++ +   +  +  W  
Sbjct: 1   MLFAAEGGGFFSSSASGYSNGLAL----------------LLLGQKTEQKPIKVSSQWNH 60

Query: 61  WRCASSSLRCFRHNPAGPNSSILKKDNPAG----PNSSILKKAASTQRQDSLKTSPLSDN 120
           +                    ++ +D+  G     + + L  A ++      K+  L   
Sbjct: 61  YH-------------------LVLEDSDTGFRLDSSKNWLSSACTSLICFGRKSERLESE 120

Query: 121 GKNQVLSS----NDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVER 180
           GK     S    N+  + ++  LKSSLKK   + VV      G++ +   G  D  H++R
Sbjct: 121 GKKDEAPSVEDYNNCEVTNRFALKSSLKKRSFSDVVI-----GDDDVSRDGVVD--HIDR 176

Query: 181 RKVQWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           RKVQW DTCG E+AEV+EFEPSE++ S+DE   G  +S
Sbjct: 181 RKVQWPDTCGIEIAEVREFEPSEVDESEDEFHHGSGKS 176

[Close]

BLAST of CmoCh04G025730 vs. NCBI nr
Match: gi|449446397|ref|XP_004140958.1| (PREDICTED: uncharacterized protein LOC101221691 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 6.2e-76
Identity = 159/211 (75.36%), Postives = 173/211 (81.99%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLN-ELASTKTWI 60
           MLL  EGGGFFSSSASGYSSSL+LL LGQKSE K MRVLPLL+DR+PD+N +LASTKTWI
Sbjct: 1   MLLALEGGGFFSSSASGYSSSLSLLLLGQKSEDKSMRVLPLLVDRDPDVNIQLASTKTWI 60

Query: 61  SWRCASSSLR-CFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSDNGK 120
           SWRCAS S R CFRHNPAGP +               LKK A+TQRQDSL+TSP+SDNGK
Sbjct: 61  SWRCASPSFRRCFRHNPAGPTTP------------PPLKKPATTQRQDSLRTSPISDNGK 120

Query: 121 NQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWI 180
           N V SS+++NLA KMVLKSSLKK  DA + SV NADGNEA GGKGSCDSSHVERRKVQW 
Sbjct: 121 NHVPSSDEDNLARKMVLKSSLKKTSDANIDSVRNADGNEATGGKGSCDSSHVERRKVQWT 180

Query: 181 DTCGSELAEVKEFEPSEINVSDDENDFGKRR 210
           DTCGS+LAEVKEFEPSEIN SDDEND GKRR
Sbjct: 181 DTCGSQLAEVKEFEPSEINASDDENDMGKRR 199

[Close]

BLAST of CmoCh04G025730 vs. NCBI nr
Match: gi|700190914|gb|KGN46118.1| (hypothetical protein Csa_6G055390 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 6.2e-76
Identity = 159/211 (75.36%), Postives = 173/211 (81.99%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPLLLDREPDLN-ELASTKTWI 60
           MLL  EGGGFFSSSASGYSSSL+LL LGQKSE K MRVLPLL+DR+PD+N +LASTKTWI
Sbjct: 122 MLLALEGGGFFSSSASGYSSSLSLLLLGQKSEDKSMRVLPLLVDRDPDVNIQLASTKTWI 181

Query: 61  SWRCASSSLR-CFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSDNGK 120
           SWRCAS S R CFRHNPAGP +               LKK A+TQRQDSL+TSP+SDNGK
Sbjct: 182 SWRCASPSFRRCFRHNPAGPTTP------------PPLKKPATTQRQDSLRTSPISDNGK 241

Query: 121 NQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKVQWI 180
           N V SS+++NLA KMVLKSSLKK  DA + SV NADGNEA GGKGSCDSSHVERRKVQW 
Sbjct: 242 NHVPSSDEDNLARKMVLKSSLKKTSDANIDSVRNADGNEATGGKGSCDSSHVERRKVQWT 301

Query: 181 DTCGSELAEVKEFEPSEINVSDDENDFGKRR 210
           DTCGS+LAEVKEFEPSEIN SDDEND GKRR
Sbjct: 302 DTCGSQLAEVKEFEPSEINASDDENDMGKRR 320

[Close]

BLAST of CmoCh04G025730 vs. NCBI nr
Match: gi|595793567|ref|XP_007200532.1| (hypothetical protein PRUPE_ppa011559mg [Prunus persica])

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-36
Identity = 108/215 (50.23%), Postives = 133/215 (61.86%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL  EGGGFFSSSASGYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLALLLLGQKNEDKPMRVSPWNQYQLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD+L  S +SD
Sbjct: 61  KDRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDNLPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D++ + K+VLKSSLKK    T VSV +A+  EAL    S    + ERRKV
Sbjct: 121 KGKDHTADTDDDHNSIKVVLKSSLKKPSKRTPVSVESANEREALSETCSDTPDNAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           QW DTCGSEL E++EFEPSE++ SDDE D G  RS
Sbjct: 181 QWTDTCGSELVEIREFEPSELDGSDDEFDNGNERS 200

[Close]

BLAST of CmoCh04G025730 vs. NCBI nr
Match: gi|645264000|ref|XP_008237489.1| (PREDICTED: uncharacterized protein LOC103336225 [Prunus mume])

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 108/215 (50.23%), Postives = 132/215 (61.40%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           MLL  EGGGFFSSSASGYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLLAVEGGGFFSSSASGYSKGLALLLLGQKNEDKPMRVSPWNQYQLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD L  S +SD
Sbjct: 61  KDRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDILPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D++ + K+VLKSSLKK    T VSV +A+  EAL    S    + ERRKV
Sbjct: 121 KGKDHTADTDDDHNSIKVVLKSSLKKPSKRTPVSVESANEREALSETCSDTPDNAERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           QW DTCGSEL E++EFEPSE++ SDDE D G  RS
Sbjct: 181 QWTDTCGSELVEIREFEPSELDGSDDEFDNGNERS 200

[Close]

BLAST of CmoCh04G025730 vs. NCBI nr
Match: gi|657979780|ref|XP_008381860.1| (PREDICTED: uncharacterized protein LOC103444685 [Malus domestica])

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 106/215 (49.30%), Postives = 131/215 (60.93%), Query Frame = 1


Query: 1   MLLLAEGGGFFSSSASGYSSSLTLLFLGQKSEVKPMRVLPL----LLDREPDLN-ELAST 60
           ML   EGGGFFSSSA+GYS  L LL LGQK+E KPMRV P     L+D+E D + +LAST
Sbjct: 1   MLFAVEGGGFFSSSAAGYSKGLALLLLGQKNEDKPMRVSPWNQYRLVDQESDTDLQLAST 60

Query: 61  KTWISWRCASSSLRCFRHNPAGPNSSILKKDNPAGPNSSILKKAASTQRQDSLKTSPLSD 120
           K  +S  CAS    CF    AG ++    K  PA             Q+QD L  S +SD
Sbjct: 61  KNRLSRGCAS--FVCFGRASAGLDTPSPLKVGPA-------------QQQDILPGSLVSD 120

Query: 121 NGKNQVLSSNDENLASKMVLKSSLKKAPDATVVSVGNADGNEALGGKGSCDSSHVERRKV 180
            GK+    ++D+++A K+VLKSSLK+    T VSV +A+  EAL   GS    HVERRKV
Sbjct: 121 KGKDHTAGADDDHIARKVVLKSSLKRPSKRTPVSVESANEREALSEPGSDIPGHVERRKV 180

Query: 181 QWIDTCGSELAEVKEFEPSEINVSDDENDFGKRRS 211
           QW D CGSEL E++EFEPSE + SDD  D G  +S
Sbjct: 181 QWTDVCGSELVEIREFEPSETDGSDDGFDDGNEKS 200

The following BLAST results are available for this feature:

BLAST of CmoCh04G025730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G025730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9H6_CUCSA	4.3e-76	75.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G055390 PE=4 SV=1	[more]
M5VLH2_PRUPE	3.3e-36	50.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011559mg PE=4 SV=1	[more]
U5GKT5_POPTR	2.0e-33	48.84	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s06550g PE=4 SV=1	[more]
B9SEB0_RICCO	4.5e-33	47.91	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0961490 PE=4 SV=1	[more]
A0A067KXI8_JATCU	1.3e-32	46.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08331 PE=4 SV=1	[more]

BLAST of CmoCh04G025730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22790.1	3.7e-26	39.73	unknown protein	[more]
AT1G34010.1	1.3e-15	32.57	unknown protein	[more]

BLAST of CmoCh04G025730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446397\|ref\|XP_004140958.1\|	6.2e-76	75.36	PREDICTED: uncharacterized protein LOC101221691 [Cucumis sativus]	[more]
gi\|700190914\|gb\|KGN46118.1\|	6.2e-76	75.36	hypothetical protein Csa_6G055390 [Cucumis sativus]	[more]
gi\|595793567\|ref\|XP_007200532.1\|	4.8e-36	50.23	hypothetical protein PRUPE_ppa011559mg [Prunus persica]	[more]
gi\|645264000\|ref\|XP_008237489.1\|	1.1e-35	50.23	PREDICTED: uncharacterized protein LOC103336225 [Prunus mume]	[more]
gi\|657979780\|ref\|XP_008381860.1\|	1.1e-35	49.30	PREDICTED: uncharacterized protein LOC103444685 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009642	response to light intensity
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G025730.1	CmoCh04G025730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33401	FAMILY NOT NAMED	coord: 2..80 score: 2.0E-55coord: 97..232 score: 2.0
None	No IPR available	PANTHER	PTHR33401:SF3	SUBFAMILY NOT NAMED	coord: 2..80 score: 2.0E-55coord: 97..232 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G025730	Cucsa.363890	Cucumber (Gy14) v1	cgycmoB1004
CmoCh04G025730	CmaCh15G005810	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G025730	CmaCh04G024580	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G025730	Cla013780	Watermelon (97103) v1	cmowmB665
CmoCh04G025730	Csa6G055390	Cucumber (Chinese Long) v2	cmocuB760
CmoCh04G025730	MELO3C008326	Melon (DHL92) v3.5.1	cmomeB672
CmoCh04G025730	ClCG08G007400	Watermelon (Charleston Gray)	cmowcgB685
CmoCh04G025730	CSPI06G04720	Wild cucumber (PI 183967)	cmocpiB769
CmoCh04G025730	Lsi08G005700	Bottle gourd (USVL1VR-Ls)	cmolsiB697
CmoCh04G025730	Cp4.1LG13g03840	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G025730	Cp4.1LG01g21300	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G025730	MELO3C008326.2	Melon (DHL92) v3.6.1	cmomedB762
CmoCh04G025730	CsaV3_6G005040	Cucumber (Chinese Long) v3	cmocucB0898
CmoCh04G025730	Cla97C08G150100	Watermelon (97103) v2	cmowmbB765
CmoCh04G025730	Bhi04G001349	Wax gourd	cmowgoB0865
CmoCh04G025730	CsGy6G004660	Cucumber (Gy14) v2	cgybcmoB815
CmoCh04G025730	Carg01616	Silver-seed gourd	carcmoB1121
CmoCh04G025730	Carg15801	Silver-seed gourd	carcmoB0094

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G025730	CmoCh15G005880	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G025730	Watermelon (97103) v2	cmowmbB760
CmoCh04G025730	Watermelon (97103) v2	cmowmbB762
CmoCh04G025730	Watermelon (97103) v2	cmowmbB770
CmoCh04G025730	Cucurbita moschata (Rifu)	cmocmoB029
CmoCh04G025730	Cucurbita moschata (Rifu)	cmocmoB367
CmoCh04G025730	Cucumber (Gy14) v1	cgycmoB0137
CmoCh04G025730	Cucumber (Chinese Long) v2	cmocuB771
CmoCh04G025730	Watermelon (Charleston Gray)	cmowcgB605
CmoCh04G025730	Watermelon (Charleston Gray)	cmowcgB680
CmoCh04G025730	Watermelon (Charleston Gray)	cmowcgB682
CmoCh04G025730	Watermelon (97103) v1	cmowmB661
CmoCh04G025730	Watermelon (97103) v1	cmowmB663
CmoCh04G025730	Cucurbita pepo (Zucchini)	cmocpeB708
CmoCh04G025730	Bottle gourd (USVL1VR-Ls)	cmolsiB643
CmoCh04G025730	Cucumber (Gy14) v2	cgybcmoB950
CmoCh04G025730	Cucumber (Chinese Long) v3	cmocucB0902
CmoCh04G025730	Cucumber (Chinese Long) v3	cmocucB0911