Cp4.1LG01g20590 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g20590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description40S ribosomal protein S8
LocationCp4.1LG01 : 17459872 .. 17462315 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGATTTTACTATTAATTTATTTTTCCAGTTGACAATTACTTAACGTTATTGGATTTTAGCCCCAAGTCCGGCCCATGTATTATGATACTCGGCCCATCTTTAAGCCCACAATAGCCCTGCAGTTCACTCGAAACCCTAATTTATATTTCACCTCCTTCCTCAAACCTCACTCCTAGTGCCTTCTGCGGAGCGTCCATACTTGTCTCCGCCGTCTGCCGATCGGCTTCTGCCGTCCCAGTGAGTATTTTCCCTCATCGTCTGTACTTAATGCACATCTCTGTCTCGTTGATGCTTGTCTCTTTCGCATTCTCTTTCTATGTTTCACGTTTGCCTTTGAAAGTTTAGGTTTAGGGTTTGAGCGGGTTTTGTCATTTTTTATGATAGGTTGGATCAGGAACCTTAGAACTTCTCTTTGCGGAGGAGCTCTCGATTCGTCAAGATGGGTAAGTCATATGCGGACTTTCGGATTGTTCTACACATCTCCATTTGTGTGCTTGTTTTTCTTCTTTGTAATCATGGAGAGTTTTGTGTACAGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTAACTTTCTCTGCTTGTATTTATTTGTGTGCAATTAGATTCAGTTTTTACTCCATTTCCCCAAATTAGTTGCTAATTGGCATTCAAAAGATTTCATGTCTTTCTACATTTAATTTTTTGGTTTTCAGTATACAATGCTAGCTTCGTGATCTTAGCTGTAACAATGCCTTTTTAATTGGATGTTAGTGACATTATTATCAAGGATTTGCCGTTTGTTTCCTCTTGCAGTGTATATTTCAAGAACTTTAGTTAATCTGCGTTAGATACCTCATCTTCTCTGATAGACTAACGTTTTTTCTTTTACTAAAAATTTATGAGTAGCTATAACATGCTTCACATTTGATGCTTGGATGAACGGAAAACTGTAATTTCCCTTGCTGACATAGCAATTTAGTCTTTTCCAGTATTTTTTCTAAGGTGCAGTTCCAGTTTACTAATTTTTTATGTGCAAGTAGAAATATAACATTATTTACCTGTGTTTACGAGGTTTCGATCACTTTCTATTTAAGGGAGGATACAATTGTCATGTGCTGTGTTATTTTTCATGTTCTCACACGATATCATTTCTTTGTATAGGTATGAGCTTGGAAGGCAACCTGCCAACACGAAGATATCCAGTGACAAGTCAATCCGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAATTATTCATGGGGTAGTGAGGCCGTGACTAGGAAGACCCGTATTCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAATGGTATCTTCAACACTATGGGGTGGATATTGGAAGGAAGAAGAAGACCTCAGCACCTGCCAAGAAGGAAGAGGTAGAGCAAAGCTTGTTCTAAGTTCGATTGTTTGGTTTTTTGTTCTTGAAATTTCAAATATGAGGACAATGTTAATGGCATTCTAGCATGATCCATAAGACACCCTATTTGTTTATGGTTGATAGGAAGGTGAGGCTGCTGCTGCTGCGGAGGAGTTGAAGAAGAGTAACCACGTTCAGCGCAAGTTGGAGAAACGTCAACAGGATCGTAAGCTCGACCCACATATTGAGGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGGTAAGCACGCTCATTGAAGGATTTTTGTCCTTTCGAACTCGTCTTGACAGACGTTGTAGGGTTTTTTAGTAGTTTGGCTGATGTCTTACAAATTTTTTGCAGGTATATCTTGGAGGGGAAAGAACTCGAGTTCTACATGAAGAAGCTCCAGAGGAAGAAGGGGAAAGGTGCTGGTGCTGCATAAGTTTTGTCGTTGAGATATGTTGTGGCCGTGTTTCATTTTCTATGATTCTATCTGCCTTTTTTGTCTTCTGAAGATATGATGATTTGCAGCTAAGAGGATAGAATTATTTATGAACTTCAATTTTGCTGGTATTAGTTGTTTAATTACAATACTTTATTTGAGTCTGTTTCGTGATTATAACAGTTCGTTTATTAGCCTCAGAATTTTCAAATGCCCCAACCTATTTCTTTGCTTACTGATTTAATTTGGTCTAGTTGAGTTAATCTTGTTCTTTTTTGGCTTGCATTCTGATTATTTCTTTCCTTAGAATAATCTAGCCATCAATTATTTCTTCCTGGTTAATAATAATAATAATAATTTAGCCTATATTATTATTATAAATATTCATTTTAAAAAAATTATTATTATTACTATGCTGAGTTTGGGAAATACCATTATTAGTT

mRNA sequence

GGGATTTTACTATTAATTTATTTTTCCAGTTGACAATTACTTAACGTTATTGGATTTTAGCCCCAAGTCCGGCCCATGTATTATGATACTCGGCCCATCTTTAAGCCCACAATAGCCCTGCAGTTCACTCGAAACCCTAATTTATATTTCACCTCCTTCCTCAAACCTCACTCCTAGTGCCTTCTGCGGAGCGTCCATACTTGTCTCCGCCGTCTGCCGATCGGCTTCTGCCGTCCCAGTTGGATCAGGAACCTTAGAACTTCTCTTTGCGGAGGAGCTCTCGATTCGTCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACGAAGATATCCAGTGACAAGTCAATCCGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAATTATTCATGGGGTAGTGAGGCCGTGACTAGGAAGACCCGTATTCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAATGGTATCTTCAACACTATGGGGTGGATATTGGAAGGAAGAAGAAGACCTCAGCACCTGCCAAGAAGGAAGAGGAAGGTGAGGCTGCTGCTGCTGCGGAGGAGTTGAAGAAGAGTAACCACGTTCAGCGCAAGTTGGAGAAACGTCAACAGGATCGTAAGCTCGACCCACATATTGAGGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGGTATATCTTGGAGGGGAAAGAACTCGAGTTCTACATGAAGAAGCTCCAGAGGAAGAAGGGGAAAGGTGCTGGTGCTGCATAAGTTTTGTCGTTGAGATATGTTGTGGCCGTGTTTCATTTTCTATGATTCTATCTGCCTTTTTTGTCTTCTGAAGATATGATGATTTGCAGCTAAGAGGATAGAATTATTTATGAACTTCAATTTTGCTGGTATTAGTTGTTTAATTACAATACTTTATTTGAGTCTGTTTCGTGATTATAACAGTTCGTTTATTAGCCTCAGAATTTTCAAATGCCCCAACCTATTTCTTTGCTTACTGATTTAATTTGGTCTAGTTGAGTTAATCTTGTTCTTTTTTGGCTTGCATTCTGATTATTTCTTTCCTTAGAATAATCTAGCCATCAATTATTTCTTCCTGGTTAATAATAATAATAATAATTTAGCCTATATTATTATTATAAATATTCATTTTAAAAAAATTATTATTATTACTATGCTGAGTTTGGGAAATACCATTATTAGTT

Coding sequence (CDS)

ATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGCGAAAGTATGAGCTTGGAAGGCAACCTGCCAACACGAAGATATCCAGTGACAAGTCAATCCGGAGGATTAGAGTTCGTGGGGGTAATGTGAAGTGGCGTGCTTTTAGGCTTGATACTGGTAATTATTCATGGGGTAGTGAGGCCGTGACTAGGAAGACCCGTATTCTTGATGTGGTGTACAATGCATCGAACAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCACCATTTAAGCAATGGTATCTTCAACACTATGGGGTGGATATTGGAAGGAAGAAGAAGACCTCAGCACCTGCCAAGAAGGAAGAGGAAGGTGAGGCTGCTGCTGCTGCGGAGGAGTTGAAGAAGAGTAACCACGTTCAGCGCAAGTTGGAGAAACGTCAACAGGATCGTAAGCTCGACCCACATATTGAGGAGCAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCAGGTCAATGTGGCCGAGCAGATGGGTATATCTTGGAGGGGAAAGAACTCGAGTTCTACATGAAGAAGCTCCAGAGGAAGAAGGGGAAAGGTGCTGGTGCTGCATAA

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Homology
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BLAST of Cp4.1LG01g20590 vs. Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2)

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-103
Identity = 194/221 (87.78%), Postives = 203/221 (91.86%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEG-EAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT A  K   EG E  AAAEE KKSNHV RKLEKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 221
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]
BLAST of Cp4.1LG01g20590 vs. Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2)

HSP 1 Score: 375.6 bits (963), Expect = 3.9e-103
Identity = 192/220 (87.27%), Postives = 200/220 (90.91%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK  A  K  E  +A A  EE KKSNHV RKLEKRQQ R LD HIEEQF SGRL+
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 221
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]
BLAST of Cp4.1LG01g20590 vs. Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-101
Identity = 191/221 (86.43%), Postives = 203/221 (91.86%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           +IGRKKKT+A AKK+   E  A  EE KKSNHV  KLEKRQQ R LD HIEEQF  G+L+
Sbjct: 121 EIGRKKKTAA-AKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Cp4.1LG01g20590 vs. Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 4.9e-98
Identity = 180/221 (81.45%), Postives = 204/221 (92.31%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTSAPAKKE-EEGE--AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+++  KK+ EEGE  A AA EE+KKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 219
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Cp4.1LG01g20590 vs. Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.2e-97
Identity = 185/221 (83.71%), Postives = 198/221 (89.59%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK          GE A   EE+KKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+
Sbjct: 121 DIGRKKK----------GE-AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 ACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]
BLAST of Cp4.1LG01g20590 vs. TrEMBL
Match: A0A0A0KFT0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_6G382970 PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.1e-112
Identity = 211/222 (95.05%), Postives = 219/222 (98.65%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGE-AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT+A AKK+EEG+ AAAAAEE+KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]
BLAST of Cp4.1LG01g20590 vs. TrEMBL
Match: A0A0A0LJA0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_2G059750 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 4.6e-111
Identity = 209/221 (94.57%), Postives = 214/221 (96.83%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKTSA  KKEEEG+  A  EE+KKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSASVKKEEEGD--AGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG01g20590 vs. TrEMBL
Match: A0A067KSQ5_JATCU (40S ribosomal protein S8 OS=Jatropha curcas GN=JCGZ_00973 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 9.9e-106
Identity = 200/221 (90.50%), Postives = 209/221 (94.57%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK +A  K+ EEGE   A EE+KKSNHV RKLEKRQQ RKLDPHIEEQF+ GRLM
Sbjct: 121 DIGRKKKVAATKKEGEEGE--GATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG01g20590 vs. TrEMBL
Match: B9SSR3_RICCO (40S ribosomal protein S8 OS=Ricinus communis GN=RCOM_0046320 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.3e-105
Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPA+TK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKT+A  K+ EEGE  AA EE+KKSNHV RKLEKRQQ RKLDPHIEEQF  GRL+
Sbjct: 121 DIGRKKKTAAAKKEGEEGE--AATEEVKKSNHVLRKLEKRQQIRKLDPHIEEQFGGGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG01g20590 vs. TrEMBL
Match: V4SRN1_9ROSI (40S ribosomal protein S8 OS=Citrus clementina GN=CICLE_v10032694mg PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.3e-105
Identity = 201/222 (90.54%), Postives = 209/222 (94.14%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGE-AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKK     +  EEGE AAAAAEE KKSNHV RKLEKRQ+DR LDPHIEEQF +GRL
Sbjct: 121 DIGRKKKAVTKKETTEEGESAAAAAEETKKSNHVVRKLEKRQKDRTLDPHIEEQFGAGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]
BLAST of Cp4.1LG01g20590 vs. TAIR10
Match: AT5G20290.1 (AT5G20290.1 Ribosomal protein S8e family protein)

HSP 1 Score: 358.6 bits (919), Expect = 2.7e-99
Identity = 180/221 (81.45%), Postives = 204/221 (92.31%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTSAPAKKE-EEGE--AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+++  KK+ EEGE  A AA EE+KKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 219
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Cp4.1LG01g20590 vs. TAIR10
Match: AT5G59240.1 (AT5G59240.1 Ribosomal protein S8e family protein)

HSP 1 Score: 355.9 bits (912), Expect = 1.8e-98
Identity = 185/221 (83.71%), Postives = 198/221 (89.59%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK          GE A   EE+KKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+
Sbjct: 121 DIGRKKK----------GE-AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACI+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 ACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]
BLAST of Cp4.1LG01g20590 vs. NCBI nr
Match: gi|449464166|ref|XP_004149800.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 5.9e-112
Identity = 211/222 (95.05%), Postives = 219/222 (98.65%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAV+RKTRILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGE-AAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT+A AKK+EEG+ AAAAAEE+KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]
BLAST of Cp4.1LG01g20590 vs. NCBI nr
Match: gi|659133447|ref|XP_008466734.1| (PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111
Identity = 211/221 (95.48%), Postives = 217/221 (98.19%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKT+A  KK+EEG+ AAAAEE+KKSNHVQRKLEKRQ+ RKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTAASTKKDEEGD-AAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Cp4.1LG01g20590 vs. NCBI nr
Match: gi|659069757|ref|XP_008451649.1| (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111
Identity = 211/221 (95.48%), Postives = 215/221 (97.29%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKTSA AKKEEEG+  A  EE+KKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSASAKKEEEGD--AGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG01g20590 vs. NCBI nr
Match: gi|449461203|ref|XP_004148331.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 6.6e-111
Identity = 209/221 (94.57%), Postives = 214/221 (96.83%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKKTSA  KKEEEG+  A  EE+KKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLM
Sbjct: 121 DIGRKKKTSASVKKEEEGD--AGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG01g20590 vs. NCBI nr
Match: gi|802588536|ref|XP_012070941.1| (PREDICTED: 40S ribosomal protein S8 [Jatropha curcas])

HSP 1 Score: 391.0 bits (1003), Expect = 1.4e-105
Identity = 200/221 (90.50%), Postives = 209/221 (94.57%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTSAPAKKEEEGEAAAAAEELKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK +A  K+ EEGE   A EE+KKSNHV RKLEKRQQ RKLDPHIEEQF+ GRLM
Sbjct: 121 DIGRKKKVAATKKEGEEGE--GATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLM 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222
           ACISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGAA
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 219

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g20590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS8_MAIZE1.7e-10387.7840S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2[more]
RS8_ORYSJ3.9e-10387.2740S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2[more]
RS8_PRUAR1.2e-10186.4340S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1[more]
RS81_ARATH4.9e-9881.4540S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1[more]
RS82_ARATH3.2e-9783.7140S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1[more]
BLAST of Cp4.1LG01g20590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFT0_CUCSA4.1e-11295.0540S ribosomal protein S8 OS=Cucumis sativus GN=Csa_6G382970 PE=3 SV=1[more]
A0A0A0LJA0_CUCSA4.6e-11194.5740S ribosomal protein S8 OS=Cucumis sativus GN=Csa_2G059750 PE=3 SV=1[more]
A0A067KSQ5_JATCU9.9e-10690.5040S ribosomal protein S8 OS=Jatropha curcas GN=JCGZ_00973 PE=3 SV=1[more]
B9SSR3_RICCO1.3e-10590.5040S ribosomal protein S8 OS=Ricinus communis GN=RCOM_0046320 PE=3 SV=1[more]
V4SRN1_9ROSI1.3e-10590.5440S ribosomal protein S8 OS=Citrus clementina GN=CICLE_v10032694mg PE=3 SV=1[more]
BLAST of Cp4.1LG01g20590 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20290.12.7e-9981.45 Ribosomal protein S8e family protein[more]
AT5G59240.11.8e-9883.71 Ribosomal protein S8e family protein[more]
BLAST of Cp4.1LG01g20590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464166|ref|XP_004149800.1|5.9e-11295.05PREDICTED: 40S ribosomal protein S8 [Cucumis sativus][more]
gi|659133447|ref|XP_008466734.1|1.3e-11195.48PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo][more]
gi|659069757|ref|XP_008451649.1|1.3e-11195.48PREDICTED: 40S ribosomal protein S8-like [Cucumis melo][more]
gi|449461203|ref|XP_004148331.1|6.6e-11194.57PREDICTED: 40S ribosomal protein S8 [Cucumis sativus][more]
gi|802588536|ref|XP_012070941.1|1.4e-10590.50PREDICTED: 40S ribosomal protein S8 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR018283Ribosomal_S8e_CS
IPR001047Ribosomal_S8e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g20590.1Cp4.1LG01g20590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 2..216
score: 7.1E
IPR001047Ribosomal protein S8eTIGRFAMsTIGR00307TIGR00307coord: 1..200
score: 4.1
IPR018283Ribosomal protein S8e, conserved sitePROSITEPS01193RIBOSOMAL_S8Ecoord: 11..30
scor
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 1..198
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g20590Cucsa.060620Cucumber (Gy14) v1cgycpeB0080
Cp4.1LG01g20590CmaCh15G006670Cucurbita maxima (Rimu)cmacpeB318
Cp4.1LG01g20590CmaCh04G023730Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g20590CmoCh04G024860Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g20590CmoCh15G006760Cucurbita moschata (Rifu)cmocpeB280
Cp4.1LG01g20590Cla013924Watermelon (97103) v1cpewmB393
Cp4.1LG01g20590Csa6G382970Cucumber (Chinese Long) v2cpecuB461
Cp4.1LG01g20590MELO3C010630Melon (DHL92) v3.5.1cpemeB401
Cp4.1LG01g20590ClCG08G005850Watermelon (Charleston Gray)cpewcgB415
Cp4.1LG01g20590CSPI06G20230Wild cucumber (PI 183967)cpecpiB462
Cp4.1LG01g20590Lsi08G004460Bottle gourd (USVL1VR-Ls)cpelsiB382
Cp4.1LG01g20590MELO3C010630.2Melon (DHL92) v3.6.1cpemedB466
Cp4.1LG01g20590CsaV3_6G034270Cucumber (Chinese Long) v3cpecucB0570
Cp4.1LG01g20590Bhi04G001502Wax gourdcpewgoB0533
Cp4.1LG01g20590CsGy6G019710Cucumber (Gy14) v2cgybcpeB799
Cp4.1LG01g20590Carg01541Silver-seed gourdcarcpeB1158
Cp4.1LG01g20590Carg24428Silver-seed gourdcarcpeB0627
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g20590Cp4.1LG13g04590Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g20590Wax gourdcpewgoB0578
Cp4.1LG01g20590Cucurbita pepo (Zucchini)cpecpeB389
Cp4.1LG01g20590Cucurbita pepo (Zucchini)cpecpeB404
Cp4.1LG01g20590Cucurbita pepo (Zucchini)cpecpeB405
Cp4.1LG01g20590Cucurbita maxima (Rimu)cmacpeB039
Cp4.1LG01g20590Cucurbita maxima (Rimu)cmacpeB041
Cp4.1LG01g20590Cucurbita maxima (Rimu)cmacpeB480
Cp4.1LG01g20590Cucurbita moschata (Rifu)cmocpeB014
Cp4.1LG01g20590Cucurbita moschata (Rifu)cmocpeB016
Cp4.1LG01g20590Cucurbita moschata (Rifu)cmocpeB438
Cp4.1LG01g20590Wild cucumber (PI 183967)cpecpiB409
Cp4.1LG01g20590Cucumber (Chinese Long) v2cpecuB410
Cp4.1LG01g20590Bottle gourd (USVL1VR-Ls)cpelsiB356
Cp4.1LG01g20590Watermelon (Charleston Gray)cpewcgB359
Cp4.1LG01g20590Watermelon (97103) v1cpewmB458
Cp4.1LG01g20590Melon (DHL92) v3.5.1cpemeB429
Cp4.1LG01g20590Cucumber (Gy14) v2cgybcpeB511
Cp4.1LG01g20590Melon (DHL92) v3.6.1cpemedB500
Cp4.1LG01g20590Silver-seed gourdcarcpeB0941
Cp4.1LG01g20590Cucumber (Chinese Long) v3cpecucB0505