Cp4.1LG01g19890 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g19890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMYB family protein
LocationCp4.1LG01 : 16975087 .. 16976265 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGTTCCATTAAGAGTTTATAAATTCTTCTCTCTCTTCATTTGCTTCTTCTCTCTCTAGGAAATTAAACAGAGAATTTAGAATTATGGGAAGGCAACCTTGTTGTGATGAAGTTGGGTTGAAAAAAGGGCCATGGACTGCTGAAGAGGACAAGAAGCTCATCACCTTCCTCCACACCAATGGTCAATGCTGTTGGAGGGCTGTCCCTAAACTTGCAGGTCTCGATTCCCGACCCTCCTGAAATCGTTCCGTTTAGACGATACCTGTGTCTAACCCGTTGAGCTATGTTTTGGGGTTTTGCAGGATTGTTGCGATGTGGGAAGAGTTGTAGACTTAGATGGACTAATTACCTTAGGCCTGATCTGAAACGAGGCCTCTTGTCGGAATATGAGGAGAAAATGGTCATTGATCTTCATTCTCAAATGGGTAATAGGTAATTATTTGATTGAATTTTTGTTCTTTTTTTAAGAGAAATTAAGAGAGAGAGAGAGAAAGGAAGAGTCATGTGGTGTAATCATGGATGGCATGTTGTTTTTCTTCTCAAAACTAGGGGCAATTTTGACATTTTGTCCTTTTATTAACGGGTTTTAACTCGCTTACTCTTTTTTTGGATAGGTGGTCAAAAATTGCTTCTCATCTTCCGGGAAGAACAGACAACGAGATAAAAAACCACTGGAACACCCACATAAAGAAAAAGCTAAAAAAGATGGGAATCGATCCTCAAACACACAAGCCCGTTTCTCAACTTTCTGACAACGCCCATTTGGCTCATCAAAACGACCAGAAGTCTCGACAACAACAATCTCCTCCATCTCCATCGCCATCACCGTCACGAGCATTGGAAGAACATGATAAAGAGACGGTGATCGATGAAACCGACGTGATGGACTTACTCGTAGATGGGTTTTGCACGGAAGAAGACGTGTCACTAATCGAGCCGCTACGAGAAGTTGGAGTCCCATGTGCTTCTTCTTCTTCATCAACAACCTCAACCCCTTCCTCTTCCACCCCCTCATCCTCTTCTTCATTTTGCTCACACTCGGAATCAGCAGCCAATTTGCTTCAAGATTTGGTGAATGAGTTCCCTGAATTTGAATGGCCAAATATTTGTGAAAATGGCTTAGTGGATGAGCTTTTGGAGGATGAGCTTGGTGATTGGGATTTTATCATCGATAATTCT

mRNA sequence

TAGTTCCATTAAGAGTTTATAAATTCTTCTCTCTCTTCATTTGCTTCTTCTCTCTCTAGGAAATTAAACAGAGAATTTAGAATTATGGGAAGGCAACCTTGTTGTGATGAAGTTGGGTTGAAAAAAGGGCCATGGACTGCTGAAGAGGACAAGAAGCTCATCACCTTCCTCCACACCAATGGTCAATGCTGTTGGAGGGCTGTCCCTAAACTTGCAGCATTGGAAGAACATGATAAAGAGACGGTGATCGATGAAACCGACGTGATGGACTTACTCGTAGATGGGTTTTGCACGGAAGAAGACGTGTCACTAATCGAGCCGCTACGAGAAGTTGGAGTCCCATGTGCTTCTTCTTCTTCATCAACAACCTCAACCCCTTCCTCTTCCACCCCCTCATCCTCTTCTTCATTTTGCTCACACTCGGAATCAGCAGCCAATTTGCTTCAAGATTTGGTGAATGAGTTCCCTGAATTTGAATGGCCAAATATTTGTGAAAATGGCTTAGTGGATGAGCTTTTGGAGGATGAGCTTGGTGATTGGGATTTTATCATCGATAATTCT

Coding sequence (CDS)

ATGGGAAGGCAACCTTGTTGTGATGAAGTTGGGTTGAAAAAAGGGCCATGGACTGCTGAAGAGGACAAGAAGCTCATCACCTTCCTCCACACCAATGGTCAATGCTGTTGGAGGGCTGTCCCTAAACTTGCAGCATTGGAAGAACATGATAAAGAGACGGTGATCGATGAAACCGACGTGATGGACTTACTCGTAGATGGGTTTTGCACGGAAGAAGACGTGTCACTAATCGAGCCGCTACGAGAAGTTGGAGTCCCATGTGCTTCTTCTTCTTCATCAACAACCTCAACCCCTTCCTCTTCCACCCCCTCATCCTCTTCTTCATTTTGCTCACACTCGGAATCAGCAGCCAATTTGCTTCAAGATTTGGTGAATGAGTTCCCTGAATTTGAATGGCCAAATATTTGTGAAAATGGCTTAGTGGATGAGCTTTTGGAGGATGAGCTTGGTGATTGGGATTTTATCATCGATAATTCT

Protein sequence

MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAALEEHDKETVIDETDVMDLLVDGFCTEEDVSLIEPLREVGVPCASSSSSTTSTPSSSTPSSSSSFCSHSESAANLLQDLVNEFPEFEWPNICENGLVDELLEDELGDWDFIIDNS
Homology
[Close]
BLAST of Cp4.1LG01g19890 vs. Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAALEEHDK 52
          MGRQPCCD++G+KKGPWTAEEDKKLI+F+ TNGQCCWRAVPKLA L+   K
Sbjct: 1  MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGK 51

[Close]
BLAST of Cp4.1LG01g19890 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-14
Identity = 29/46 (63.04%), Postives = 40/46 (86.96%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGR+PCC++VGL++GPWT+EED+KL++ +  NG  CWRA+PKLA L
Sbjct: 1  MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. Swiss-Prot
Match: MYB29_ARATH (Transcription factor MYB29 OS=Arabidopsis thaliana GN=MYB29 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.5e-11
Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAALEEHDK 52
          M R+PCC   GLKKG WTAEEDKKLI+++H +G+  WR +P+ A L+   K
Sbjct: 1  MSRKPCCVGEGLKKGAWTAEEDKKLISYIHEHGEGGWRDIPQKAGLKRCGK 51

[Close]
BLAST of Cp4.1LG01g19890 vs. Swiss-Prot
Match: MYB35_ARATH (Transcription factor MYB35 OS=Arabidopsis thaliana GN=MYB35 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAALEEHDKETVIDETDV 60
          MGR PCCD+  +KKG WT EED K++ ++  +G   W  +PK A L    K   +  T+ 
Sbjct: 1  MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNY 60

Query: 61 M--DLLVDGFCTEEDVSLIEPLREVG 85
          +  DL  D F T+E+  +IE  R +G
Sbjct: 61 LRPDLKHDSFSTQEEELIIECHRAIG 86

[Close]
BLAST of Cp4.1LG01g19890 vs. Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAALEEHDK 52
          MGR PCC++VG+K+G WTAEED+ L  ++ +NG+  WR++PK A L+   K
Sbjct: 1  MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGK 51

[Close]
BLAST of Cp4.1LG01g19890 vs. TrEMBL
Match: A0A0A0KRP9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G425400 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24
Identity = 76/121 (62.81%), Postives = 94/121 (77.69%), Query Frame = 1 

Query: 41  PKLAALEEHDKETVIDETDVMDLLVDGFCTEEDVSLIEPLREVGVPCASSSSSTTSTPSS 100
           PK    E    +T I ET++ DL++DGFCTEE V LIEP  E+ VPCASSSS+T+++ SS
Sbjct: 153 PKELKKEVTAAKTDIIETNITDLIMDGFCTEE-VPLIEP-HEILVPCASSSSTTSTSYSS 212

Query: 101 STPSSSSSFCSHSESAANLLQDLVNEFPEFEWPNIC-ENGLVDE-LLEDELG-DWDFIID 159
           S+  S SSF S+ ESAANLLQDLVNEFPEFEWPNIC ENG+V+E LLED+ G  WDF+++
Sbjct: 213 SSSYSYSSFSSNPESAANLLQDLVNEFPEFEWPNICEENGIVEEGLLEDDFGSSWDFMVN 271

[Close]
BLAST of Cp4.1LG01g19890 vs. TrEMBL
Match: I1QIU3_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEED+KLITFL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDQKLITFLLTNGQCCWRAVPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. TrEMBL
Match: Q84NI9_ORYSJ (Myb51 protein OS=Oryza sativa subsp. japonica GN=Os08g0428200 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEED+KLITFL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDQKLITFLLTNGQCCWRAVPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. TrEMBL
Match: Q8H0P2_ORYSA (Myb51 protein OS=Oryza sativa GN=myb51 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEED+KLITFL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDQKLITFLLTNGQCCWRAVPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. TrEMBL
Match: A2YVF0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29307 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEED+KLITFL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDQKLITFLLTNGQCCWRAVPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. TAIR10
Match: AT1G66230.1 (AT1G66230.1 myb domain protein 20)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEED+KLI F+ TNGQCCWRAVPKL+ L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. TAIR10
Match: AT5G16600.1 (AT5G16600.1 myb domain protein 43)

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-19
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWT EEDKKLI F+ TNG CCWRA+PKL+ L
Sbjct: 1  MGRQPCCDKVGLKKGPWTIEEDKKLINFILTNGHCCWRALPKLSGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. TAIR10
Match: AT4G22680.1 (AT4G22680.1 myb domain protein 85)

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-19
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAALEEHDK 52
          MGRQPCCD++G+KKGPWT EEDKKLI F+ TNG CCWRA+PKLA L    K
Sbjct: 1  MGRQPCCDKLGVKKGPWTVEEDKKLINFILTNGHCCWRALPKLAGLRRCGK 51

[Close]
BLAST of Cp4.1LG01g19890 vs. TAIR10
Match: AT4G12350.1 (AT4G12350.1 myb domain protein 42)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18
Identity = 37/51 (72.55%), Postives = 42/51 (82.35%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAALEEHDK 52
          MGRQPCCD++ +KKGPWTAEEDKKLI F+ TNG CCWRA+PKLA L    K
Sbjct: 1  MGRQPCCDKLMVKKGPWTAEEDKKLINFILTNGHCCWRALPKLAGLRRCGK 51

[Close]
BLAST of Cp4.1LG01g19890 vs. TAIR10
Match: AT5G62320.1 (AT5G62320.1 myb domain protein 99)

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-16
Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 1 

Query: 2  GRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQC-------CWRAVPKLAALEEHDKETV 61
          GR+PCCDEVGL+KGPWT EED KL+ FL   G C       CWR VPKLA L    K   
Sbjct: 3  GRKPCCDEVGLRKGPWTVEEDGKLVDFLRARGNCGGGGGGWCWRDVPKLAGLRRCGKSCR 62

Query: 62 IDETDVM-DLLVDGFCTEEDVSLI 78
          +  T+ +   L  G  TEE++ L+
Sbjct: 63 LRWTNYLRPDLKRGLFTEEEIQLV 86

[Close]
BLAST of Cp4.1LG01g19890 vs. NCBI nr
Match: gi|449445075|ref|XP_004140299.1| (PREDICTED: protein ODORANT1 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 76/121 (62.81%), Postives = 94/121 (77.69%), Query Frame = 1 

Query: 41  PKLAALEEHDKETVIDETDVMDLLVDGFCTEEDVSLIEPLREVGVPCASSSSSTTSTPSS 100
           PK    E    +T I ET++ DL++DGFCTEE V LIEP  E+ VPCASSSS+T+++ SS
Sbjct: 153 PKELKKEVTAAKTDIIETNITDLIMDGFCTEE-VPLIEP-HEILVPCASSSSTTSTSYSS 212

Query: 101 STPSSSSSFCSHSESAANLLQDLVNEFPEFEWPNIC-ENGLVDE-LLEDELG-DWDFIID 159
           S+  S SSF S+ ESAANLLQDLVNEFPEFEWPNIC ENG+V+E LLED+ G  WDF+++
Sbjct: 213 SSSYSYSSFSSNPESAANLLQDLVNEFPEFEWPNICEENGIVEEGLLEDDFGSSWDFMVN 271

[Close]
BLAST of Cp4.1LG01g19890 vs. NCBI nr
Match: gi|125561613|gb|EAZ07061.1| (hypothetical protein OsI_29307 [Oryza sativa Indica Group])

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEED+KLITFL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDQKLITFLLTNGQCCWRAVPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. NCBI nr
Match: gi|1021551740|ref|XP_016167224.1| (PREDICTED: protein ODORANT1 [Arachis ipaensis])

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEEDKKLI+FL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDKKLISFLLTNGQCCWRAVPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. NCBI nr
Match: gi|1002288896|ref|XP_015648743.1| (PREDICTED: protein ODORANT1 [Oryza sativa Japonica Group])

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEED+KLITFL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDQKLITFLLTNGQCCWRAVPKLAGL 46

[Close]
BLAST of Cp4.1LG01g19890 vs. NCBI nr
Match: gi|1012204903|ref|XP_015931632.1| (PREDICTED: myb-related protein 315 [Arachis duranensis])

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 1 

Query: 1  MGRQPCCDEVGLKKGPWTAEEDKKLITFLHTNGQCCWRAVPKLAAL 47
          MGRQPCCD+VGLKKGPWTAEEDKKLI+FL TNGQCCWRAVPKLA L
Sbjct: 1  MGRQPCCDKVGLKKGPWTAEEDKKLISFLLTNGQCCWRAVPKLAGL 46

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g19890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ODO1_PETHY1.1e-1978.43Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1[more]
MYB2_PHYPA4.1e-1463.04Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1[more]
MYB29_ARATH9.5e-1154.90Transcription factor MYB29 OS=Arabidopsis thaliana GN=MYB29 PE=1 SV=1[more]
MYB35_ARATH1.2e-1039.53Transcription factor MYB35 OS=Arabidopsis thaliana GN=MYB35 PE=2 SV=1[more]
MYB12_ARATH1.6e-1050.98Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1[more]
BLAST of Cp4.1LG01g19890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRP9_CUCSA1.0e-2462.81Uncharacterized protein OS=Cucumis sativus GN=Csa_5G425400 PE=4 SV=1[more]
I1QIU3_ORYGL3.3e-1891.30Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1[more]
Q84NI9_ORYSJ3.3e-1891.30Myb51 protein OS=Oryza sativa subsp. japonica GN=Os08g0428200 PE=4 SV=1[more]
Q8H0P2_ORYSA3.3e-1891.30Myb51 protein OS=Oryza sativa GN=myb51 PE=2 SV=1[more]
A2YVF0_ORYSI3.3e-1891.30Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29307 PE=4... [more]
BLAST of Cp4.1LG01g19890 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66230.11.8e-2084.78 myb domain protein 20[more]
AT5G16600.12.6e-1980.43 myb domain protein 43[more]
AT4G22680.12.6e-1972.55 myb domain protein 85[more]
AT4G12350.11.0e-1872.55 myb domain protein 42[more]
AT5G62320.16.1e-1648.81 myb domain protein 99[more]
BLAST of Cp4.1LG01g19890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445075|ref|XP_004140299.1|1.5e-2462.81PREDICTED: protein ODORANT1 [Cucumis sativus][more]
gi|125561613|gb|EAZ07061.1|4.7e-1891.30hypothetical protein OsI_29307 [Oryza sativa Indica Group][more]
gi|1021551740|ref|XP_016167224.1|4.7e-1891.30PREDICTED: protein ODORANT1 [Arachis ipaensis][more]
gi|1002288896|ref|XP_015648743.1|4.7e-1891.30PREDICTED: protein ODORANT1 [Oryza sativa Japonica Group][more]
gi|1012204903|ref|XP_015931632.1|4.7e-1891.30PREDICTED: myb-related protein 315 [Arachis duranensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000652 regulation of secondary cell wall biogenesis
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0044238 primary metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g19890.1Cp4.1LG01g19890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..43
score: 6.
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 5..46
score: 4.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 9..45
score: 7.
IPR017877Myb-like domainPROFILEPS50090MYB_LIKEcoord: 9..42
score: 6
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..43
score: 9.7
NoneNo IPR availablePANTHERPTHR10641:SF503SUBFAMILY NOT NAMEDcoord: 1..43
score: 9.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g19890CmoCh04G023920Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g19890MELO3C022867Melon (DHL92) v3.5.1cpemeB360
Cp4.1LG01g19890ClCG01G008780Watermelon (Charleston Gray)cpewcgB370
Cp4.1LG01g19890CsaV3_5G024200Cucumber (Chinese Long) v3cpecucB0545
Cp4.1LG01g19890Bhi12G001058Wax gourdcpewgoB0490
Cp4.1LG01g19890CsGy5G015000Cucumber (Gy14) v2cgybcpeB650
Cp4.1LG01g19890Carg01459Silver-seed gourdcarcpeB1158
Cp4.1LG01g19890Carg18275Silver-seed gourdcarcpeB0747
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g19890Cp4.1LG13g05310Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g19890Cucurbita maxima (Rimu)cmacpeB318
Cp4.1LG01g19890Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g19890Cucurbita moschata (Rifu)cmocpeB280
Cp4.1LG01g19890Wild cucumber (PI 183967)cpecpiB441
Cp4.1LG01g19890Cucumber (Chinese Long) v2cpecuB441
Cp4.1LG01g19890Bottle gourd (USVL1VR-Ls)cpelsiB311
Cp4.1LG01g19890Watermelon (97103) v1cpewmB441
Cp4.1LG01g19890Melon (DHL92) v3.6.1cpemedB420