Cp4.1LG01g17820 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g17820
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pathogenesis-related protein 1
Location	Cp4.1LG01 : 14054303 .. 14054782 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTACCTCACGCTTCACAACCGAGCTCGAGCCCAAGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCAAAGAAAAGAAAGGGTGATTGCACCATGATTCACTCAACCGGGCCGTACGGGGAAAATATAGCTGCAGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTACGATCATGCGCTGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTATGGCGTAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

mRNA sequence

ATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTACCTCACGCTTCACAACCGAGCTCGAGCCCAAGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCAAAGAAAAGAAAGGGTGATTGCACCATGATTCACTCAACCGGGCCGTACGGGGAAAATATAGCTGCAGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTACGATCATGCGCTGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTATGGCGTAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Coding sequence (CDS)

ATGGCCGCTTTCATGGCCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTACCTCACGCTTCACAACCGAGCTCGAGCCCAAGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCAAAGAAAAGAAAGGGTGATTGCACCATGATTCACTCAACCGGGCCGTACGGGGAAAATATAGCTGCAGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTACGATCATGCGCTGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTATGGCGTAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGA

Protein sequence

MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPYDSWVV

Homology

[Close]

BLAST of Cp4.1LG01g17820 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-51
Identity = 92/154 (59.74%), Postives = 112/154 (72.73%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           + A   TF  L+  + AQN+P+DYL  HN AR QVGVGPM W N +AAYAQ YA +R GD
Sbjct: 7   IVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGD 66

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C MIHS GPYGEN+AA + P+   A AVK+W +EK  YD+  N CVGG CGHYTQ+VWR+
Sbjct: 67  CGMIHSHGPYGENLAAAF-PQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRN 126

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPY 155
           SVRLGCARV       F+ CNYDPPGN+IG++P+
Sbjct: 127 SVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cp4.1LG01g17820 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43
Identity = 81/154 (52.60%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           +  F+A    L+  + AQ++P+DYL +HN+AR  VGVGPMQW   VAAYA++YA++ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C +IHS GPYGEN+A G   + +G  AV +W +EK  Y++A N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPY 155
           SVRLGCA+V        + CNYDP GNY+ EKPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG01g17820 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-42
Identity = 81/154 (52.60%), Postives = 102/154 (66.23%), Query Frame = 1


Query: 5   MATFIFLLALTN---AQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDC 64
           ++T +  L +++   AQN+ +DYL  HN ARA VGV P+ W + VAAYAQ YA +   DC
Sbjct: 15  VSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADC 74

Query: 65  TMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGE-CGHYTQMVWRS 124
            ++HS G YGEN+A G     T A AV++W +EK  YDH  N C  G+ CGHYTQ+VWR+
Sbjct: 75  NLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 134

Query: 125 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPY 155
           SVR+GCARV        V CNYDPPGNY GE PY
Sbjct: 135 SVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cp4.1LG01g17820 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-42
Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 1


Query: 11  LLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTGPY 70
           L+    AQ++ +DY+  HN+AR+Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 71  GENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSVRLGCARVP 130
           GEN+A     + +G  AV LW NEK  Y++  N C  G CGHYTQ+VWR+SVRLGCA+V 
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVR 139

Query: 131 YKANSQFVVCNYDPPGNYIGEKPY 155
                  + CNYDPPGNY  +KPY
Sbjct: 140 CNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG01g17820 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-42
Identity = 79/155 (50.97%), Postives = 101/155 (65.16%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           + + +  F+ +   ++AQN+ +DYL  HN ARA VGV P+ W N VAAYAQ Y  +   D
Sbjct: 14  LVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAAD 73

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGE-CGHYTQMVWR 120
           C ++HS G YGEN+A G     T A AV++W +EK  YDH  N C  G+ CGHYTQ+VWR
Sbjct: 74  CNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWR 133

Query: 121 SSVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPY 155
           +SVR+GCARV        V CNYDPPGN IG+ PY
Sbjct: 134 NSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cp4.1LG01g17820 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.1e-65
Identity = 110/148 (74.32%), Postives = 127/148 (85.81%), Query Frame = 1


Query: 9   IFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTG 68
           +FL  LT+AQN+P+DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DC ++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSVRLGCAR 128
           PYGENIA G+YPEFTGAD VKLW  EK LYD+A N C GG+CGHYTQ+VWR+SV LGCAR
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCAR 120

Query: 129 VPYKANSQFVVCNYDPPGNYIGEKPYDS 157
           VP K  SQFVVCNYDPPGNYIG +PY+S
Sbjct: 121 VPCKGKSQFVVCNYDPPGNYIGLRPYNS 148

[Close]

BLAST of Cp4.1LG01g17820 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.9e-64
Identity = 112/156 (71.79%), Postives = 127/156 (81.41%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F  TF FL  LT AQ +P+DY++LHN+ARA V VGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C ++HSTGPYGENIA GYYPEFTGAD VKLW  EK LYD+A N C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPYDS 157
           SV LGCARV  K  SQFVVCNYDPPGNYIG +PY+S
Sbjct: 121 SVHLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNS 156

[Close]

BLAST of Cp4.1LG01g17820 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-55
Identity = 101/152 (66.45%), Postives = 116/152 (76.32%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F   F F   LT+AQNAP+DY++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C +IHSTGPYGENIA GYYPEFTGAD VK+W  EK LYD+A N C GG+CGHYTQ+VWR+
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEK 153
           SV LGCARV  K  SQFV     P  ++   K
Sbjct: 121 SVHLGCARVACKGKSQFVFSPLPPNDDHTQNK 152

[Close]

BLAST of Cp4.1LG01g17820 vs. TrEMBL
Match: E2GEV9_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.9e-51
Identity = 91/138 (65.94%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 17  AQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTGPYGENIAA 76
           AQN+P+DY+  HN ARAQVGVGPM W+NTVAAYAQ YA +R GDC ++HS GPYGENIA 
Sbjct: 25  AQNSPQDYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCNLVHSGGPYGENIAW 84

Query: 77  GYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSVRLGCARVPYKANSQ 136
           G  P  TG DAV +W  EK  YD+  N CVGG+CGHYTQ+VWR+SVRLGCARV       
Sbjct: 85  GS-PSLTGTDAVNMWVGEKPNYDYNSNSCVGGKCGHYTQVVWRNSVRLGCARVQCNNGGW 144

Query: 137 FVVCNYDPPGNYIGEKPY 155
           F+ CNYDPPGNY+G++PY
Sbjct: 145 FITCNYDPPGNYVGQRPY 161

[Close]

BLAST of Cp4.1LG01g17820 vs. TrEMBL
Match: A9CSN7_9ROSI (Putative pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=Tam-PR1 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.5e-51
Identity = 91/138 (65.94%), Postives = 105/138 (76.09%), Query Frame = 1


Query: 17  AQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTGPYGENIAA 76
           AQN+P+DYL  HN ARAQVGVGPM W NTVAAYAQ YA +R GDC ++HS GPYGEN+A 
Sbjct: 24  AQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYANQRIGDCNLVHSGGPYGENLAW 83

Query: 77  GYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSVRLGCARVPYKANSQ 136
           G  P  TG DAV +W  EK  YD+  N CVGG+CGHYTQ+VWR+SVRLGCAR+       
Sbjct: 84  GS-PSLTGTDAVNMWVGEKSNYDYNSNSCVGGQCGHYTQVVWRNSVRLGCARIQCNKGGW 143

Query: 137 FVVCNYDPPGNYIGEKPY 155
           FV CNYDP GNYIG++PY
Sbjct: 144 FVTCNYDPRGNYIGQRPY 160

[Close]

BLAST of Cp4.1LG01g17820 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 7.4e-46
Identity = 82/146 (56.16%), Postives = 100/146 (68.49%), Query Frame = 1


Query: 10  FLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTGP 69
           FL+  TNAQN P+DYL  HN ARAQVGV  + W  T+AAYA  Y+  RK DC ++HS GP
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 70  YGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGG-ECGHYTQMVWRSSVRLGCAR 129
           YGEN+A G    F+   AVKLW +EK  Y +A N C GG +C HYTQ+VWR SV++GCAR
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCAR 135

Query: 130 VPYKANSQFVVCNYDPPGNYIGEKPY 155
           V       FV CNY+ PGN++GE PY
Sbjct: 136 VQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Cp4.1LG01g17820 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 177.2 bits (448), Expect = 8.2e-45
Identity = 80/148 (54.05%), Postives = 104/148 (70.27%), Query Frame = 1


Query: 8   FIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHST 67
           F+ L+    AQ++P+D+L +HNRARA+VGVGP++W   VAAYA+ YA +RKGDC M HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 68  GPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCV-GGECGHYTQMVWRSSVRLGC 127
           G YGENIA       TG  AV +W +E+  YD+  N C    +CGHYTQ+VWR+S RLGC
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 136

Query: 128 ARVPYKANSQFVVCNYDPPGNYIGEKPY 155
           A+V       F+ CNYDPPGN++GE PY
Sbjct: 137 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cp4.1LG01g17820 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 177.2 bits (448), Expect = 8.2e-45
Identity = 81/154 (52.60%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           +  F+A    L+  + AQ++P+DYL +HN+AR  VGVGPMQW   VAAYA++YA++ +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C +IHS GPYGEN+A G   + +G  AV +W +EK  Y++A N C  G CGHYTQ+VWR 
Sbjct: 70  CRLIHSGGPYGENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRK 129

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPY 155
           SVRLGCA+V        + CNYDP GNY+ EKPY
Sbjct: 130 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG01g17820 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 173.7 bits (439), Expect = 9.0e-44
Identity = 77/144 (53.47%), Postives = 100/144 (69.44%), Query Frame = 1


Query: 11  LLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTGPY 70
           L+    AQ++ +DY+  HN+AR+Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 71  GENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSVRLGCARVP 130
           GEN+A     + +G  AV LW NEK  Y++  N C  G CGHYTQ+VWR+SVRLGCA+V 
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVR 139

Query: 131 YKANSQFVVCNYDPPGNYIGEKPY 155
                  + CNYDPPGNY  +KPY
Sbjct: 140 CNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG01g17820 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 167.2 bits (422), Expect = 8.4e-42
Identity = 79/144 (54.86%), Postives = 100/144 (69.44%), Query Frame = 1


Query: 13  ALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTGPYGE 72
           A  N    P++ L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DC M HS GP+GE
Sbjct: 34  ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGE 93

Query: 73  NIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVG-GECGHYTQMVWRSSVRLGCARVPY 132
           N+AAG +   +G  A + W  EK  YD+  N C G G CGHYTQ+VWR SVRLGCA V  
Sbjct: 94  NLAAG-WGTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRC 153

Query: 133 KANSQ-FVVCNYDPPGNYIGEKPY 155
           K +   +V+C+YDPPGNYIG++PY
Sbjct: 154 KNDEYIWVICSYDPPGNYIGQRPY 176

[Close]

BLAST of Cp4.1LG01g17820 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66
Identity = 114/156 (73.08%), Postives = 131/156 (83.97%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA    TF+FL  LT+AQN+P+DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK D
Sbjct: 1   MAILFPTFMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKND 60

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C ++HSTGPYGENIA G+YPEFTGAD VKLW  EK LYD+A N C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPYDS 157
           SV LGCARVP K  SQFVVCNYDPPGNYIG +PY+S
Sbjct: 121 SVHLGCARVPCKGKSQFVVCNYDPPGNYIGLRPYNS 156

[Close]

BLAST of Cp4.1LG01g17820 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 8.7e-65
Identity = 110/148 (74.32%), Postives = 127/148 (85.81%), Query Frame = 1


Query: 9   IFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCTMIHSTG 68
           +FL  LT+AQN+P+DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DC ++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRSSVRLGCAR 128
           PYGENIA G+YPEFTGAD VKLW  EK LYD+A N C GG+CGHYTQ+VWR+SV LGCAR
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCAR 120

Query: 129 VPYKANSQFVVCNYDPPGNYIGEKPYDS 157
           VP K  SQFVVCNYDPPGNYIG +PY+S
Sbjct: 121 VPCKGKSQFVVCNYDPPGNYIGLRPYNS 148

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BLAST of Cp4.1LG01g17820 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 5.7e-64
Identity = 111/156 (71.15%), Postives = 131/156 (83.97%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F A+F+FL  LT+AQN+P+DY+ LHN+ARA VGVGPM W++T+AAYA+AYA +R  D
Sbjct: 1   MAIFFASFMFLFFLTHAQNSPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKD 60

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C ++HS GPYGENIA GYYPEFTGAD VKLW  EK LYD+A N C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSKGPYGENIAVGYYPEFTGADGVKLWVAEKRLYDYASNSCKGGDCGHYTQLVWRT 120

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPYDS 157
           SVRLGCARV  K  SQFVVCNYDPPGNYIG +PY+S
Sbjct: 121 SVRLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNS 156

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BLAST of Cp4.1LG01g17820 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 5.7e-64
Identity = 112/156 (71.79%), Postives = 127/156 (81.41%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F  TF FL  LT AQ +P+DY++LHN+ARA V VGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C ++HSTGPYGENIA GYYPEFTGAD VKLW  EK LYD+A N C GG+CGHYTQ+VWR+
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEKPYDS 157
           SV LGCARV  K  SQFVVCNYDPPGNYIG +PY+S
Sbjct: 121 SVHLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNS 156

[Close]

BLAST of Cp4.1LG01g17820 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 4.8e-55
Identity = 101/152 (66.45%), Postives = 116/152 (76.32%), Query Frame = 1


Query: 1   MAAFMATFIFLLALTNAQNAPRDYLTLHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F   F F   LT+AQNAP+DY++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  CTMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKLLYDHALNKCVGGECGHYTQMVWRS 120
           C +IHSTGPYGENIA GYYPEFTGAD VK+W  EK LYD+A N C GG+CGHYTQ+VWR+
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVWRT 120

Query: 121 SVRLGCARVPYKANSQFVVCNYDPPGNYIGEK 153
           SV LGCARV  K  SQFV     P  ++   K
Sbjct: 121 SVHLGCARVACKGKSQFVFSPLPPNDDHTQNK 152

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	1.4e-51	59.74	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1_ARATH	1.4e-43	52.60	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PR1A_TOBAC	1.6e-42	52.60	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PRB1_ARATH	1.6e-42	53.47	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1B_TOBAC	2.7e-42	50.97	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]

BLAST of Cp4.1LG01g17820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHP4_CUCSA	6.1e-65	74.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
A0A0A0LSG5_CUCSA	3.9e-64	71.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
A0A0A0LLX7_CUCSA	3.3e-55	66.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1	[more]
E2GEV9_9ROSI	2.9e-51	65.94	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
A9CSN7_9ROSI	6.5e-51	65.94	Putative pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=Tam-PR1 PE=2...	[more]

BLAST of Cp4.1LG01g17820 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	7.4e-46	56.16	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT4G33720.1	8.2e-45	54.05	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	8.2e-45	52.60	pathogenesis-related gene 1	[more]
AT2G14580.1	9.0e-44	53.47	basic pathogenesis-related protein 1	[more]
AT2G19990.1	8.4e-42	54.86	pathogenesis-related protein-1-like	[more]

BLAST of Cp4.1LG01g17820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722387\|ref\|XP_011658476.1\|	2.1e-66	73.08	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	8.7e-65	74.32	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	5.7e-64	71.15	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|700207817\|gb\|KGN62936.1\|	5.7e-64	71.79	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]
gi\|700207816\|gb\|KGN62935.1\|	4.8e-55	66.45	hypothetical protein Csa_2G381130 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR018244	Allrgn_V5/Tpx1_CS
IPR014044	CAP_domain
IPR002413	V5_allergen
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050896	response to stimulus
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17820.1	Cp4.1LG01g17820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 137..150 score: 3.4E-19coord: 87..100 score: 3.4E-19coord: 40..58 score: 3.4E-19coord: 110..126 score: 3.4
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 3..159 score: 3.3
IPR002413	Ves allergen	PRINTS	PR00838	V5ALLERGEN	coord: 40..58 score: 1.3E-6coord: 85..100 score: 1.3E-6coord: 109..128 score: 1.
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 21..156 score: 5.3
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 25..142 score: 3.2
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 19..150 score: 4.7
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 13..155 score: 1.96
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 111..121 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 137..148 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 3..159 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g17820	CmaCh04G020400	Cucurbita maxima (Rimu)	cmacpeB721

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g17820	Melon (DHL92) v3.6.1	cpemedB413
Cp4.1LG01g17820	Silver-seed gourd	carcpeB1450
Cp4.1LG01g17820	Cucumber (Chinese Long) v3	cpecucB0530
Cp4.1LG01g17820	Cucumber (Chinese Long) v3	cpecucB0535
Cp4.1LG01g17820	Wax gourd	cpewgoB0574
Cp4.1LG01g17820	Cucurbita pepo (Zucchini)	cpecpeB037
Cp4.1LG01g17820	Cucumber (Gy14) v1	cgycpeB0757
Cp4.1LG01g17820	Cucurbita maxima (Rimu)	cmacpeB436
Cp4.1LG01g17820	Cucurbita moschata (Rifu)	cmocpeB286
Cp4.1LG01g17820	Cucurbita moschata (Rifu)	cmocpeB400
Cp4.1LG01g17820	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g17820	Cucurbita moschata (Rifu)	cmocpeB680
Cp4.1LG01g17820	Cucurbita moschata (Rifu)	cmocpeB685
Cp4.1LG01g17820	Wild cucumber (PI 183967)	cpecpiB429
Cp4.1LG01g17820	Wild cucumber (PI 183967)	cpecpiB435
Cp4.1LG01g17820	Cucumber (Chinese Long) v2	cpecuB434
Cp4.1LG01g17820	Cucumber (Chinese Long) v2	cpecuB436
Cp4.1LG01g17820	Bottle gourd (USVL1VR-Ls)	cpelsiB313
Cp4.1LG01g17820	Watermelon (Charleston Gray)	cpewcgB381
Cp4.1LG01g17820	Watermelon (Charleston Gray)	cpewcgB400
Cp4.1LG01g17820	Watermelon (97103) v1	cpewmB439
Cp4.1LG01g17820	Melon (DHL92) v3.5.1	cpemeB352
Cp4.1LG01g17820	Melon (DHL92) v3.5.1	cpemeB387
Cp4.1LG01g17820	Cucumber (Gy14) v2	cgybcpeB639
Cp4.1LG01g17820	Cucumber (Gy14) v2	cgybcpeB640