CmaCh04G020400 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G020400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CAP, cysteine-rich secretory protein, antigen 5
Location	Cma_Chr04 : 13244639 .. 13244929 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCACTCAATCGGGCCGTACGAGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTATGATCATGCGTCGAATAAATACGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCAGTGCGGCTTGAATGTGCTATAGTGCCCTACAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGTAACTATATTGGGGAAAAGCTTTATGGTTCTTCTTTGTAA

mRNA sequence

ATGATTCACTCAATCGGGCCGTACGAGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTATGATCATGCGTCGAATAAATACGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCAGTGCGGCTTGAATGTGCTATAGTGCCCTACAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGTAACTATATTGGGGAAAAGCTTTATGGTTCTTCTTTGTAA

Coding sequence (CDS)

ATGATTCACTCAATCGGGCCGTACGAGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACGAGAAGCTGCTGTATGATCATGCGTCGAATAAATACGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCAGTGCGGCTTGAATGTGCTATAGTGCCCTACAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCTGGTAACTATATTGGGGAAAAGCTTTATGGTTCTTCTTTGTAA

Protein sequence

MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSVRLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL

Homology

[Close]

BLAST of CmaCh04G020400 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.7e-27
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           MIHS GPY EN+ A + P+   A AVK+W +EK  YD+ SN  VGG CGHYTQ+VWR+SV
Sbjct: 69  MIHSHGPYGENLAAAF-PQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSV 128

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYG 94
           RL CA V       F+ CNYDPPGN+IG++ +G
Sbjct: 129 RLGCARVRSNNGWFFITCNYDPPGNFIGQRPFG 160

[Close]

BLAST of CmaCh04G020400 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-23
Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           MIHS GPY EN+ A + P+   A AVK+W +EK  YD+ SN    G+ CGHYTQ+VWR S
Sbjct: 67  MIHSDGPYGENLAAAF-PQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKS 126

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLYG 94
           VRL CA V   +   F+ CNYDPPGNYI + +YG
Sbjct: 127 VRLGCARVRCNSGWVFITCNYDPPGNYI-DNVYG 158

[Close]

BLAST of CmaCh04G020400 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.4e-22
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           ++HS G Y EN+  G     T A AV++W +EK  YDH SN    G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           VR+ CA V        V CNYDPPGNY GE  Y
Sbjct: 136 VRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of CmaCh04G020400 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.7e-21
Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           ++HS G Y EN+  G     T A AV++W +EK  YDH SN    G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           VR+ CA V        V CNYDPPGN IG+  Y
Sbjct: 136 VRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of CmaCh04G020400 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-20
Identity = 47/93 (50.54%), Postives = 57/93 (61.29%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGE-CGHYTQMVWRSS 60
           ++HS G Y EN+  G     T A AV++W NEK  Y H SN    G+ CGHYTQ+VWR+S
Sbjct: 76  LVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNS 135

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           VR+ CA V        V CNYDPPGN IG+  Y
Sbjct: 136 VRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of CmaCh04G020400 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.0e-35
Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  G+YPEFTGAD VKLW  EK LYD+ASN   GG+CGHYTQ+VWR+SV
Sbjct: 55  LVHSTGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSV 114

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
            L CA VP K  SQFVVCNYDPPGNYIG + Y SS+
Sbjct: 115 HLGCARVPCKGKSQFVVCNYDPPGNYIGLRPYNSSM 150

[Close]

BLAST of CmaCh04G020400 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.7e-35
Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  GYYPEFTGAD VKLW  EK LYD+ASN   GG+CGHYTQ+VWR+SV
Sbjct: 63  LVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
            L CA V  K  SQFVVCNYDPPGNYIG + Y SS+
Sbjct: 123 HLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmaCh04G020400 vs. TrEMBL
Match: E2GEV6_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-25
Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  G  P  TG DAV +W  EK  YD+ SN  VGGECGHYTQ+VWR+SV
Sbjct: 71  LVHSGGPYGENIAWGS-PSLTGTDAVNMWVGEKPNYDYNSNSCVGGECGHYTQVVWRNSV 130

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           RL CA V       FV CNYDPPGNY+G++ Y
Sbjct: 131 RLGCARVQCDNGGWFVTCNYDPPGNYVGQRPY 161

[Close]

BLAST of CmaCh04G020400 vs. TrEMBL
Match: E2GEW0_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-25
Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  G  P  TG DAV LW  EK  YD+ SN  VGG+CGHYTQ+VWR+SV
Sbjct: 71  LVHSGGPYGENIAWGS-PSLTGTDAVNLWVGEKPNYDYNSNSCVGGKCGHYTQVVWRNSV 130

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           RL CA V       FV CNYDPPGNY+G++ Y
Sbjct: 131 RLGCARVQCNNGGWFVTCNYDPPGNYVGQRPY 161

[Close]

BLAST of CmaCh04G020400 vs. TrEMBL
Match: E2GEV9_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.7e-25
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  G  P  TG DAV +W  EK  YD+ SN  VGG+CGHYTQ+VWR+SV
Sbjct: 71  LVHSGGPYGENIAWGS-PSLTGTDAVNMWVGEKPNYDYNSNSCVGGKCGHYTQVVWRNSV 130

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           RL CA V       F+ CNYDPPGNY+G++ Y
Sbjct: 131 RLGCARVQCNNGGWFITCNYDPPGNYVGQRPY 161

[Close]

BLAST of CmaCh04G020400 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.0e-22
Identity = 47/93 (50.54%), Postives = 60/93 (64.52%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYV---GGECGHYTQMVWR 60
           ++HS GP+ ENI      E +  DA ++W NEK  YD+ SN      GG C HYTQ+VW+
Sbjct: 68  LVHSNGPFGENIAMSS-GEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWK 127

Query: 61  SSVRLECAIVPYKANSQFVVCNYDPPGNYIGEK 91
           ++VRL CA V   +   F+ CNYDPPGNYIGEK
Sbjct: 128 NTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEK 159

[Close]

BLAST of CmaCh04G020400 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 100.1 bits (248), Expect = 7.6e-22
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVG-GECGHYTQMVWRSS 60
           M HS+GP+ EN+ AG+    +G  A + W  EK  YD+ SN   G G CGHYTQ+VWR S
Sbjct: 84  MKHSLGPFGENLAAGW-GTMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDS 143

Query: 61  VRLECAIVPYKANSQ-FVVCNYDPPGNYIGEKLY 93
           VRL CA V  K +   +V+C+YDPPGNYIG++ Y
Sbjct: 144 VRLGCASVRCKNDEYIWVICSYDPPGNYIGQRPY 176

[Close]

BLAST of CmaCh04G020400 vs. TAIR10
Match: AT4G25790.1 (AT4G25790.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 7.6e-22
Identity = 47/94 (50.00%), Postives = 58/94 (61.70%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVG-GECGHYTQMVWRSS 60
           + HS GPY EN+  G   +FT   AV+ W  E   Y+H +N   G G CGHYTQ+VWR +
Sbjct: 117 LTHSTGPYGENLFWGSGSDFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRET 176

Query: 61  VRLECA-IVPYKANSQFVVCNYDPPGNYIGEKLY 93
            RL CA +V       F+ CNYDPPGNY+GEK Y
Sbjct: 177 RRLGCARVVCENGAGVFITCNYDPPGNYVGEKPY 210

[Close]

BLAST of CmaCh04G020400 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-21
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           +IHS GPY EN+  G   + +G  AV +W +EK  Y++A+N    G CGHYTQ+VWR SV
Sbjct: 72  LIHSGGPYGENLAWGS-GDLSGVSAVNMWVSEKANYNYAANT-CNGVCGHYTQVVWRKSV 131

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           RL CA V        + CNYDP GNY+ EK Y
Sbjct: 132 RLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmaCh04G020400 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-21
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGG-ECGHYTQMVWRSS 60
           ++HS GPY EN+  G    F+   AVKLW +EK  Y +A N   GG +C HYTQ+VWR S
Sbjct: 69  LVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDS 128

Query: 61  VRLECAIVPYKANSQFVVCNYDPPGNYIGEKLY 93
           V++ CA V       FV CNY+ PGN++GE  Y
Sbjct: 129 VKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 4.3e-35
Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  G+YPEFTGAD VKLW  EK LYD+ASN   GG+CGHYTQ+VWR+SV
Sbjct: 63  LVHSTGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
            L CA VP K  SQFVVCNYDPPGNYIG + Y SS+
Sbjct: 123 HLGCARVPCKGKSQFVVCNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 4.3e-35
Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  G+YPEFTGAD VKLW  EK LYD+ASN   GG+CGHYTQ+VWR+SV
Sbjct: 55  LVHSTGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSV 114

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
            L CA VP K  SQFVVCNYDPPGNYIG + Y SS+
Sbjct: 115 HLGCARVPCKGKSQFVVCNYDPPGNYIGLRPYNSSM 150

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 154.8 bits (390), Expect = 7.4e-35
Identity = 68/95 (71.58%), Postives = 75/95 (78.95%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  GYYPEFTGAD VKLW  EK LYD+ASN   GG+CGHYTQ+VWR+SV
Sbjct: 63  LVHSKGPYGENIAVGYYPEFTGADGVKLWVAEKRLYDYASNSCKGGDCGHYTQLVWRTSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSS 96
           RL CA V  K  SQFVVCNYDPPGNYIG + Y SS
Sbjct: 123 RLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNSS 157

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 9.7e-35
Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           ++HS GPY ENI  GYYPEFTGAD VKLW  EK LYD+ASN   GG+CGHYTQ+VWR+SV
Sbjct: 63  LVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSV 122

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
            L CA V  K  SQFVVCNYDPPGNYIG + Y SS+
Sbjct: 123 HLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmaCh04G020400 vs. NCBI nr
Match: gi|778674388|ref|XP_004138862.2| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-34
Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 1   MIHSIGPYEENIVAGYYPEFTGADAVKLWANEKLLYDHASNKYVGGECGHYTQMVWRSSV 60
           +IHS GPY ENI  GYYPEFTGAD VK+W  EK LYD+ASN   GG+CGHYTQ+VWR+SV
Sbjct: 24  LIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSV 83

Query: 61  RLECAIVPYKANSQFVVCNYDPPGNYIGEKLYGSSL 97
            L CA V  K  SQFVVCNYDPPGNYIG + Y SS+
Sbjct: 84  HLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNSSM 119

The following BLAST results are available for this feature:

BLAST of CmaCh04G020400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	5.7e-27	56.99	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1A_SOLLC	2.2e-23	55.32	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1A_TOBAC	9.4e-22	51.61	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1B_TOBAC	2.7e-21	50.54	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1C_TOBAC	1.0e-20	50.54	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]

BLAST of CmaCh04G020400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHP4_CUCSA	3.0e-35	69.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
A0A0A0LSG5_CUCSA	6.7e-35	69.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
E2GEV6_9ROSI	1.3e-25	59.78	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
E2GEW0_9ROSI	1.7e-25	59.78	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
E2GEV9_9ROSI	3.7e-25	57.61	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]

BLAST of CmaCh04G020400 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19690.1	2.0e-22	50.54	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G19990.1	7.6e-22	52.13	pathogenesis-related protein-1-like	[more]
AT4G25790.1	7.6e-22	50.00	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	1.7e-21	50.00	pathogenesis-related gene 1	[more]
AT1G50060.1	1.7e-21	48.39	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of CmaCh04G020400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722387\|ref\|XP_011658476.1\|	4.3e-35	69.79	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	4.3e-35	69.79	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	7.4e-35	71.58	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|700207817\|gb\|KGN62936.1\|	9.7e-35	69.79	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]
gi\|778674388\|ref\|XP_004138862.2\|	1.3e-34	69.79	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020400.1	CmaCh04G020400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 25..38 score: 2.1E-13coord: 48..64 score: 2.1E-13coord: 75..88 score: 2.1
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 6..92 score: 1.8
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 3..93 score: 1.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 14..80 score: 1.0
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 1..88 score: 1.
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 2..92 score: 3.66
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 49..59 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 75..86 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G020400	Cp4.1LG01g17820	Cucurbita pepo (Zucchini)	cmacpeB721

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G020400	Bottle gourd (USVL1VR-Ls)	cmalsiB623
CmaCh04G020400	Bottle gourd (USVL1VR-Ls)	cmalsiB683
CmaCh04G020400	Cucumber (Gy14) v2	cgybcmaB657
CmaCh04G020400	Cucumber (Gy14) v2	cgybcmaB663
CmaCh04G020400	Melon (DHL92) v3.6.1	cmamedB717
CmaCh04G020400	Melon (DHL92) v3.6.1	cmamedB747
CmaCh04G020400	Silver-seed gourd	carcmaB0922
CmaCh04G020400	Cucumber (Chinese Long) v3	cmacucB0877
CmaCh04G020400	Watermelon (97103) v2	cmawmbB750
CmaCh04G020400	Watermelon (97103) v2	cmawmbB768
CmaCh04G020400	Wax gourd	cmawgoB0908
CmaCh04G020400	Cucurbita moschata (Rifu)	cmacmoB698
CmaCh04G020400	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G020400	Wild cucumber (PI 183967)	cmacpiB753
CmaCh04G020400	Cucumber (Chinese Long) v2	cmacuB744
CmaCh04G020400	Melon (DHL92) v3.5.1	cmameB632
CmaCh04G020400	Watermelon (Charleston Gray)	cmawcgB648