Cp4.1LG01g17740 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g17740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Nudix hydrolase 1
Location	Cp4.1LG01 : 12857633 .. 12858497 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGCGTTTGGTCCATAAAATAATTGGTAAAGGACATTCCTGTGAGCGTGCTGCCCAAGCCAAAAGAAAGTAAACCAATTACATAACTCCACGTTACACACTTTTCCCGAGGCTTTGTGACTATACGGCCCACAATTTATACCCTCCCAACATTGTGAAGGCTTGTGGTGGAAAGACCAAAAAAATGGAGAACAATCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGTGAATCTCTCGTTTTTTGCTCACGCTTTTAATTTTGATTTAGTTTTAGAGATGGGTACCATTTTTTCTGAAAAGGGAAATTGCAGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCTTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGCGGGTTTAATCCGTTTCCTGTCTGATTGGAGTTGGAGTTTGTAATGGTAATCAACATTAGCATGCCCTCTCTTGTGTTTAGTTTGTAATGCTTTACTTAATGTGAATCTGGTATCAAGCATACATAAATTGTTTTTCATTCATCTGCATATTTAAATAATAAATATAGCATAAAAATATAG

mRNA sequence

GTTTGCGTTTGGTCCATAAAATAATTGGTAAAGGACATTCCTGTGAGCGTGCTGCCCAAGCCAAAAGAAAGTAAACCAATTACATAACTCCACGTTACACACTTTTCCCGAGGCTTTGTGACTATACGGCCCACAATTTATACCCTCCCAACATTGTGAAGGCTTGTGGTGGAAAGACCAAAAAAATGGAGAACAATCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCTTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGCGGGTTTAATCCGTTTCCTGTCTGATTGGAGTTGGAGTTTGTAATGGTAATCAACATTAGCATGCCCTCTCTTGTGTTTAGTTTGTAATGCTTTACTTAATGTGAATCTGGTATCAAGCATACATAAATTGTTTTTCATTCATCTGCATATTTAAATAATAAATATAGCATAAAAATATAG

Coding sequence (CDS)

ATGGAGAACAATCCGGTGCCGAGAGTCGGGGTGGTGGTTTATATCCTGAAGGGAAAGTCAGTGCTGTTGGGTCGAAGGCTGTCCTCCAGCGGTGACTCCAGTCACGCCACATTCGCACTCCCCGGCGGCCATCTCGAATTTGGGGAGTCGTTTGAGGAATGTGGTGTGAGAGAGGTGAAGGAAGAGACGGGGTTAGACATTGAGAAAACAGAGTTCTTGACTGTAACAAACAACCCTTTTGTGAATGATCCGAAGCCTTCCCATTATGTGGTCATTTTTATGCGCGCAGTTTTATCAGATCCCCTGCAACAGCCTCAGAATCTGGAGCCGAGTAAGTGCGGTGGGTGGGACTGGTACGATTGGGATGATCTTCCAAGCCCTCTGTTTTGGCCTTTAGAGAAGATGGTCAAAAGCGGGTTTAATCCGTTTCCTGTCTGA

Protein sequence

MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPSPLFWPLEKMVKSGFNPFPV

Homology

[Close]

BLAST of Cp4.1LG01g17740 vs. Swiss-Prot
Match: NUDT1_ARATH (Nudix hydrolase 1 OS=Arabidopsis thaliana GN=NUDT1 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-53
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 1


Query: 6   VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 65
           +PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFEEC  REV EETGL
Sbjct: 7   IPRVAVVVFILNGNSILLGRRRSSIGNS---TFALPGGHLEFGESFEECAAREVMEETGL 66

Query: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125
            IEK + LTVTNN F   P PSHYV + +RAVL DP Q+P+N+EP KC GWDWYDW++LP
Sbjct: 67  KIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLP 126

Query: 126 SPLFWPLEKMVKSGFNPF 144
            PLFWPLEK+  SGFNPF
Sbjct: 127 KPLFWPLEKLFGSGFNPF 141

[Close]

BLAST of Cp4.1LG01g17740 vs. Swiss-Prot
Match: NUD15_MOUSE (Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Mus musculus GN=Nudt15 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 1


Query: 7   PRVGVVVYILK---GKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEET 66
           P VGV V +L     + VLLG+R  S G  S   F LPGGHLEFGE++EEC  RE  EE 
Sbjct: 11  PGVGVGVVVLSCEHPRCVLLGKRKGSFGAGS---FQLPGGHLEFGETWEECAQRETWEEA 70

Query: 67  GLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRA-VLSDPLQQPQNLEPSKCGGWDWYDWD 126
           GL ++   F +V N+ FV + +  HYV I M+  V      +P+N+EP K   W+W  W+
Sbjct: 71  GLHLKNVCFASVVNS-FV-EKENYHYVTILMKGEVDMTHDSEPRNMEPEKNESWEWVPWE 130

Query: 127 DLP--SPLFWPLEKMVKSGFNPF 144
           + P    LFW L  + + G++PF
Sbjct: 131 EFPPLDQLFWALRCLKEQGYDPF 148

[Close]

BLAST of Cp4.1LG01g17740 vs. Swiss-Prot
Match: NUD15_HUMAN (Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Homo sapiens GN=NUDT15 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.2e-21
Identity = 61/141 (43.26%), Postives = 83/141 (58.87%), Query Frame = 1


Query: 9   VGVVVYILKG-KSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLDI 68
           VGVVV   K  + VLLG+R  S G  S   F LPGGHLEFGE++EEC  RE  EE  L +
Sbjct: 16  VGVVVTSCKHPRCVLLGKRKGSVGAGS---FQLPGGHLEFGETWEECAQRETWEEAALHL 75

Query: 69  EKTEFLTVTNNPFVNDPKPSHYVVIFMRA---VLSDPLQQPQNLEPSKCGGWDWYDWDDL 128
           +   F +V N+ F+ + +  HYV I M+    V  D   +P+N+EP K   W+W  W++L
Sbjct: 76  KNVHFASVVNS-FI-EKENYHYVTILMKGEVDVTHD--SEPKNVEPEKNESWEWVPWEEL 135

Query: 129 P--SPLFWPLEKMVKSGFNPF 144
           P    LFW L  + + G++PF
Sbjct: 136 PPLDQLFWGLRCLKEQGYDPF 149

[Close]

BLAST of Cp4.1LG01g17740 vs. Swiss-Prot
Match: ADPP_METJA (ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=nudF PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.9e-08
Identity = 43/131 (32.82%), Postives = 69/131 (52.67%), Query Frame = 1


Query: 7   PRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGLD 66
           P V V   I K   +LL +R     +     FALPGG +E GE+ EE  VRE+KEETGL 
Sbjct: 41  PAVAVDGIIEKDNKILLIKR---KNNPFKGCFALPGGFVECGETVEEAVVREIKEETGLI 100

Query: 67  IEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLPS 126
            +    L V ++P   DP+     ++F+  V+   L+   + + +     +++D ++LP 
Sbjct: 101 PKVKSLLGVYSSP-DRDPRGHVISIVFILDVIGGELKAGDDAKEA-----EFFDLNNLPK 160

Query: 127 PLFWPLEKMVK 138
            L +  EK++K
Sbjct: 161 -LAFDHEKIIK 161

[Close]

BLAST of Cp4.1LG01g17740 vs. TrEMBL
Match: A0A0A0KV11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577370 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.1e-68
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 1


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRV VVVYILKGKSVL+GRRLSS+GDSSH TFALPGGHLEFGE FEEC VREVKEETG
Sbjct: 11  PVPRVAVVVYILKGKSVLMGRRLSSAGDSSHFTFALPGGHLEFGEEFEECAVREVKEETG 70

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTN PF+NDPKPSHYV I MRAVLSDP Q P+NLEP+KC GWDWYDWD L
Sbjct: 71  LDIEKTEFLTVTNVPFLNDPKPSHYVTISMRAVLSDPSQVPENLEPNKCSGWDWYDWDHL 130

Query: 125 PSPLFWPLEKMVKSGFNPFPV 146
           P+PLFWP++KM++SGFNPFPV
Sbjct: 131 PNPLFWPMKKMIRSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. TrEMBL
Match: V4TH94_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033020mg PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-61
Identity = 112/145 (77.24%), Postives = 128/145 (88.28%), Query Frame = 1


Query: 1   MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK 60
           MEN P  RVGVVV++L+GKSVLLG+R SS GDS   T+ALPGGHLEFGESFEEC  RE+K
Sbjct: 1   MENRP--RVGVVVFVLRGKSVLLGQRRSSIGDS---TYALPGGHLEFGESFEECAARELK 60

Query: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120
           EETGLDIEK EFLTVTN+ F+ +PKPSHYVVIF+RA L+DPLQ+PQNLEP KC GWDWYD
Sbjct: 61  EETGLDIEKIEFLTVTNSVFLENPKPSHYVVIFLRAALADPLQEPQNLEPDKCHGWDWYD 120

Query: 121 WDDLPSPLFWPLEKMVKSGFNPFPV 146
           W++LP PLFWPLEKMV+SGFNPFP+
Sbjct: 121 WNNLPQPLFWPLEKMVQSGFNPFPI 140

[Close]

BLAST of Cp4.1LG01g17740 vs. TrEMBL
Match: A0A061EB50_THECC (Nudix hydrolase 1 OS=Theobroma cacao GN=TCM_011890 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-60
Identity = 109/143 (76.22%), Postives = 124/143 (86.71%), Query Frame = 1


Query: 2   ENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKE 61
           E  PVPRVGVV+++LKG SVLLGRR SS GDS   TFALPGGHLEFGESFEECG RE+KE
Sbjct: 10  ETKPVPRVGVVLFVLKGNSVLLGRRRSSIGDS---TFALPGGHLEFGESFEECGARELKE 69

Query: 62  ETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDW 121
           ETGL++ K +FLTVTNN F+ + KP+HYV IF+RAVL+DP Q PQNLEP+KC GWDWYDW
Sbjct: 70  ETGLEMGKADFLTVTNNLFLEETKPAHYVTIFLRAVLADPNQVPQNLEPNKCHGWDWYDW 129

Query: 122 DDLPSPLFWPLEKMVKSGFNPFP 145
           D+LP PLFWPLEKMV+SGFNPFP
Sbjct: 130 DNLPQPLFWPLEKMVRSGFNPFP 149

[Close]

BLAST of Cp4.1LG01g17740 vs. TrEMBL
Match: W9R2E8_9ROSA (Nudix hydrolase 1 OS=Morus notabilis GN=L484_025832 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 2.9e-58
Identity = 110/148 (74.32%), Postives = 123/148 (83.11%), Query Frame = 1


Query: 1   MENN---PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVR 60
           MEN    PVPRVGV V++L+GK+VLLG+R SS GDS   TFALPGGHLEFGESFE C  R
Sbjct: 1   MENGKEEPVPRVGVAVFLLRGKTVLLGKRRSSIGDS---TFALPGGHLEFGESFENCAAR 60

Query: 61  EVKEETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWD 120
           EVKEETGL IEK E LTVTNN F+ +PKPSHYVVIF+RAVL D  Q PQNLEP+KC GWD
Sbjct: 61  EVKEETGLVIEKMEVLTVTNNVFLEEPKPSHYVVIFIRAVLRDSDQVPQNLEPNKCDGWD 120

Query: 121 WYDWDDLPSPLFWPLEKMVKSGFNPFPV 146
           WYDW++LP PLFWPLEKM +SGFNPFP+
Sbjct: 121 WYDWNNLPKPLFWPLEKMAQSGFNPFPI 145

[Close]

BLAST of Cp4.1LG01g17740 vs. TrEMBL
Match: A0A067K2T5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18264 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.8e-58
Identity = 107/141 (75.89%), Postives = 122/141 (86.52%), Query Frame = 1


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRVGVVV++LKGKSVLLGRR ++  D    TFALPGGHLEFGESFEECG RE+KEETG
Sbjct: 88  PVPRVGVVVFLLKGKSVLLGRRRTTVCDF---TFALPGGHLEFGESFEECGAREMKEETG 147

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDI K EF+TVTN+ F+ +PKPSHYV IF+RA L+DP Q+PQNLEP KC GWDWYDWD+L
Sbjct: 148 LDIAKIEFVTVTNHVFLEEPKPSHYVTIFLRAFLADPKQEPQNLEPEKCYGWDWYDWDNL 207

Query: 125 PSPLFWPLEKMVKSGFNPFPV 146
           P PLF PLEKMV+SGFNPFP+
Sbjct: 208 PKPLFGPLEKMVQSGFNPFPI 225

[Close]

BLAST of Cp4.1LG01g17740 vs. TAIR10
Match: AT1G68760.1 (AT1G68760.1 nudix hydrolase 1)

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-54
Identity = 97/138 (70.29%), Postives = 110/138 (79.71%), Query Frame = 1


Query: 6   VPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETGL 65
           +PRV VVV+IL G S+LLGRR SS G+S   TFALPGGHLEFGESFEEC  REV EETGL
Sbjct: 7   IPRVAVVVFILNGNSILLGRRRSSIGNS---TFALPGGHLEFGESFEECAAREVMEETGL 66

Query: 66  DIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDLP 125
            IEK + LTVTNN F   P PSHYV + +RAVL DP Q+P+N+EP KC GWDWYDW++LP
Sbjct: 67  KIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQEPKNMEPEKCEGWDWYDWENLP 126

Query: 126 SPLFWPLEKMVKSGFNPF 144
            PLFWPLEK+  SGFNPF
Sbjct: 127 KPLFWPLEKLFGSGFNPF 141

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: gi|659072982|ref|XP_008467199.1| (PREDICTED: nudix hydrolase 1-like [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 7.0e-69
Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 1


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRV VVVYILKGKSVL+GRRLSS+GDS H TFALPGGHLEFGESFEEC VREVKEETG
Sbjct: 11  PVPRVAVVVYILKGKSVLMGRRLSSAGDSGHFTFALPGGHLEFGESFEECAVREVKEETG 70

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTN PF+NDPKPSHYV I MRAVLSDP Q PQNLEP+KC GWDWYDWD L
Sbjct: 71  LDIEKTEFLTVTNVPFLNDPKPSHYVTISMRAVLSDPSQVPQNLEPNKCSGWDWYDWDHL 130

Query: 125 PSPLFWPLEKMVKSGFNPFPV 146
           P+PLFWP+EKMV+SGFNPFPV
Sbjct: 131 PNPLFWPMEKMVRSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: gi|449458752|ref|XP_004147111.1| (PREDICTED: nudix hydrolase 1 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 5.9e-68
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 1


Query: 5   PVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKEETG 64
           PVPRV VVVYILKGKSVL+GRRLSS+GDSSH TFALPGGHLEFGE FEEC VREVKEETG
Sbjct: 11  PVPRVAVVVYILKGKSVLMGRRLSSAGDSSHFTFALPGGHLEFGEEFEECAVREVKEETG 70

Query: 65  LDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDWDDL 124
           LDIEKTEFLTVTN PF+NDPKPSHYV I MRAVLSDP Q P+NLEP+KC GWDWYDWD L
Sbjct: 71  LDIEKTEFLTVTNVPFLNDPKPSHYVTISMRAVLSDPSQVPENLEPNKCSGWDWYDWDHL 130

Query: 125 PSPLFWPLEKMVKSGFNPFPV 146
           P+PLFWP++KM++SGFNPFPV
Sbjct: 131 PNPLFWPMKKMIRSGFNPFPV 151

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: gi|567890479|ref|XP_006437760.1| (hypothetical protein CICLE_v10033020mg [Citrus clementina])

HSP 1 Score: 243.0 bits (619), Expect = 3.1e-61
Identity = 112/145 (77.24%), Postives = 128/145 (88.28%), Query Frame = 1


Query: 1   MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK 60
           MEN P  RVGVVV++L+GKSVLLG+R SS GDS   T+ALPGGHLEFGESFEEC  RE+K
Sbjct: 1   MENRP--RVGVVVFVLRGKSVLLGQRRSSIGDS---TYALPGGHLEFGESFEECAARELK 60

Query: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120
           EETGLDIEK EFLTVTN+ F+ +PKPSHYVVIF+RA L+DPLQ+PQNLEP KC GWDWYD
Sbjct: 61  EETGLDIEKIEFLTVTNSVFLENPKPSHYVVIFLRAALADPLQEPQNLEPDKCHGWDWYD 120

Query: 121 WDDLPSPLFWPLEKMVKSGFNPFPV 146
           W++LP PLFWPLEKMV+SGFNPFP+
Sbjct: 121 WNNLPQPLFWPLEKMVQSGFNPFPI 140

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: gi|590701241|ref|XP_007046348.1| (Nudix hydrolase 1 [Theobroma cacao])

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-60
Identity = 109/143 (76.22%), Postives = 124/143 (86.71%), Query Frame = 1


Query: 2   ENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVKE 61
           E  PVPRVGVV+++LKG SVLLGRR SS GDS   TFALPGGHLEFGESFEECG RE+KE
Sbjct: 10  ETKPVPRVGVVLFVLKGNSVLLGRRRSSIGDS---TFALPGGHLEFGESFEECGARELKE 69

Query: 62  ETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYDW 121
           ETGL++ K +FLTVTNN F+ + KP+HYV IF+RAVL+DP Q PQNLEP+KC GWDWYDW
Sbjct: 70  ETGLEMGKADFLTVTNNLFLEETKPAHYVTIFLRAVLADPNQVPQNLEPNKCHGWDWYDW 129

Query: 122 DDLPSPLFWPLEKMVKSGFNPFP 145
           D+LP PLFWPLEKMV+SGFNPFP
Sbjct: 130 DNLPQPLFWPLEKMVRSGFNPFP 149

[Close]

BLAST of Cp4.1LG01g17740 vs. NCBI nr
Match: gi|568861805|ref|XP_006484390.1| (PREDICTED: nudix hydrolase 1 [Citrus sinensis])

HSP 1 Score: 239.2 bits (609), Expect = 4.5e-60
Identity = 110/145 (75.86%), Postives = 127/145 (87.59%), Query Frame = 1


Query: 1   MENNPVPRVGVVVYILKGKSVLLGRRLSSSGDSSHATFALPGGHLEFGESFEECGVREVK 60
           MEN P  RVGVVV++L+GKSVLLG+R SS GDS   T+ALPGGHLEFGESFEEC  RE+K
Sbjct: 1   MENRP--RVGVVVFVLRGKSVLLGQRRSSIGDS---TYALPGGHLEFGESFEECAARELK 60

Query: 61  EETGLDIEKTEFLTVTNNPFVNDPKPSHYVVIFMRAVLSDPLQQPQNLEPSKCGGWDWYD 120
           EETGLDIEK EFLTV N+ F+ +PKPSHYVVIF+RA L+DPLQ+PQNLEP KC GWDWY+
Sbjct: 61  EETGLDIEKLEFLTVRNSVFLENPKPSHYVVIFLRAALADPLQEPQNLEPDKCHGWDWYE 120

Query: 121 WDDLPSPLFWPLEKMVKSGFNPFPV 146
           W++LP PLFWPLEKMV+SGFNPFP+
Sbjct: 121 WNNLPQPLFWPLEKMVQSGFNPFPI 140

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g17740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NUDT1_ARATH	2.4e-53	70.29	Nudix hydrolase 1 OS=Arabidopsis thaliana GN=NUDT1 PE=1 SV=1	[more]
NUD15_MOUSE	1.4e-21	42.66	Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Mus musculus GN=Nudt15 PE=1 SV=1	[more]
NUD15_HUMAN	3.2e-21	43.26	Probable 8-oxo-dGTP diphosphatase NUDT15 OS=Homo sapiens GN=NUDT15 PE=1 SV=1	[more]
ADPP_METJA	8.9e-08	32.82	ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 /...	[more]

BLAST of Cp4.1LG01g17740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV11_CUCSA	4.1e-68	85.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577370 PE=3 SV=1	[more]
V4TH94_9ROSI	2.2e-61	77.24	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033020mg PE=3 SV=1	[more]
A0A061EB50_THECC	1.8e-60	76.22	Nudix hydrolase 1 OS=Theobroma cacao GN=TCM_011890 PE=4 SV=1	[more]
W9R2E8_9ROSA	2.9e-58	74.32	Nudix hydrolase 1 OS=Morus notabilis GN=L484_025832 PE=3 SV=1	[more]
A0A067K2T5_JATCU	3.8e-58	75.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18264 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g17740 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68760.1	1.4e-54	70.29	nudix hydrolase 1	[more]

BLAST of Cp4.1LG01g17740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072982\|ref\|XP_008467199.1\|	7.0e-69	87.23	PREDICTED: nudix hydrolase 1-like [Cucumis melo]	[more]
gi\|449458752\|ref\|XP_004147111.1\|	5.9e-68	85.11	PREDICTED: nudix hydrolase 1 [Cucumis sativus]	[more]
gi\|567890479\|ref\|XP_006437760.1\|	3.1e-61	77.24	hypothetical protein CICLE_v10033020mg [Citrus clementina]	[more]
gi\|590701241\|ref\|XP_007046348.1\|	2.6e-60	76.22	Nudix hydrolase 1 [Theobroma cacao]	[more]
gi\|568861805\|ref\|XP_006484390.1\|	4.5e-60	75.86	PREDICTED: nudix hydrolase 1 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR020476	Nudix_hydrolase
IPR015797	NUDIX_hydrolase-like_dom_sf
IPR000086	NUDIX_hydrolase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
biological_process	GO:0006281	DNA repair
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008413	8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
molecular_function	GO:0019177	dihydroneopterin triphosphate pyrophosphohydrolase activity
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g17740.1	Cp4.1LG01g17740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 8..133 score: 2.1
IPR000086	NUDIX hydrolase domain	PROFILE	PS51462	NUDIX	coord: 6..142 score: 16
IPR015797	NUDIX hydrolase domain-like	GENE3D	G3DSA:3.90.79.10		coord: 4..137 score: 3.3
IPR015797	NUDIX hydrolase domain-like	unknown	SSF55811	Nudix	coord: 4..134 score: 4.74
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 38..52 score: 2.0E-6coord: 52..67 score: 2.
None	No IPR available	PANTHER	PTHR16099	8-OXO-DGTP DIPHOSPHATES NUDT15	coord: 5..145 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g17740	Cucsa.284040	Cucumber (Gy14) v1	cgycpeB0757
Cp4.1LG01g17740	CmaCh18G010540	Cucurbita maxima (Rimu)	cmacpeB436
Cp4.1LG01g17740	CmaCh04G019990	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g17740	CmoCh04G021200	Cucurbita moschata (Rifu)	cmocpeB685
Cp4.1LG01g17740	CmoCh18G010760	Cucurbita moschata (Rifu)	cmocpeB400
Cp4.1LG01g17740	Cla020353	Watermelon (97103) v1	cpewmB439
Cp4.1LG01g17740	Csa5G608210	Cucumber (Chinese Long) v2	cpecuB434
Cp4.1LG01g17740	MELO3C012202	Melon (DHL92) v3.5.1	cpemeB387
Cp4.1LG01g17740	ClCG05G023160	Watermelon (Charleston Gray)	cpewcgB400
Cp4.1LG01g17740	CSPI05G24820	Wild cucumber (PI 183967)	cpecpiB429
Cp4.1LG01g17740	MELO3C012202.2	Melon (DHL92) v3.6.1	cpemedB448
Cp4.1LG01g17740	CsaV3_5G033840	Cucumber (Chinese Long) v3	cpecucB0535
Cp4.1LG01g17740	Bhi07G001151	Wax gourd	cpewgoB0574
Cp4.1LG01g17740	CsGy5G024320	Cucumber (Gy14) v2	cgybcpeB640
Cp4.1LG01g17740	Carg21552	Silver-seed gourd	carcpeB1450
Cp4.1LG01g17740	Carg27164	Silver-seed gourd	carcpeB0708

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g17740	Cp4.1LG09g02650	Cucurbita pepo (Zucchini)	cpecpeB037

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g17740	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g17740	Cucurbita moschata (Rifu)	cmocpeB680
Cp4.1LG01g17740	Cucurbita moschata (Rifu)	cmocpeB682
Cp4.1LG01g17740	Bottle gourd (USVL1VR-Ls)	cpelsiB313