Cp4.1LG01g16940 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16940
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionShort-chain dehydrogenase, putative
LocationCp4.1LG01 : 11153111 .. 11154415 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCTCTAAGAAACCCAAAACCCAACACTAAAATGGCCACCACTCAAATTTTGCAGAGATCCAACACCAAAGTTGAAGAATTTGCAAGAGCCATTGTAGAAAAGGAATTTGTTCCAAATATCATCGGTATTCCCCTTCCTTTTTGTTTCAATTTCTAGTCTTGAATGAATAAAAAACAAATAGCTTAATGATTTGTGGATATGGTTGGCAGTGAATAATGCAGCTTTGATCAATAGAAATGGTAAAATATGGGAAGTGGATGCGCAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCGAATATTATGCGCCATTTCATTCCTCTTATGATTTCTAAGAAGCAAGGGATTATCATCAACATGTCTTCTATTTCGGGGAGAACTGCACATGCACTGGTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTATTATTAGTTTTTGAGTGGATGATGGTATTTATTTGGTTTGGTTCTATTTTGAAGTGTTCACCATATTGTGCATCAAAATGGGCGGTTGAAGGAGTAAGCAAAGCGGTGGCAAAAGAAGTCCCAGAGGGAGTGGCAATTGTGAGCTTAGATCCGGGCATTATATATACTGATATGTTGGTCTCTTGTCTTGGTCATTTTGCTCCACAATATCAATCCCCTCAACATTGGTAAGAAATTAATATTAATCACTAAATTTACTTCTTTTTTTTTATTTCCCATATAAGTTCGACCAAAGGAACTAAATCTAGAAACAGGTTACACGGTTAGATATGTCACATGATCGAAATATGTCGAAATAAATAAAACAAGCAAAAAGAACAATTTGAGGGGAGGAAGCTTTTCTCGAAACAAAGAAACCTTAAGCACTTAACAGCACTTAACTTTTCAATTCTACTTATCGAGTTTTGACTCACAAATTCAAGTTTTTTTAAGCGTCGAACGCATTCATATATTTGATTTGATTTTATTGTTATTGAAGGGCTTCCAAAGCAGCAACCATGATTCTTAATCTTACTCCACTAGACAATGGAGCATCTCTGGCCGTTGAAGATCCAGGCACTTTGCCCAATCTTGAATAATTTTCTCTTTATTTATAAATTTAATCTTTAAAATATTGTAAAATTTTGAAGCGAATAACGCTAATAATGTAGTTTCCATTTGTGTTATTGCAAGTATTTGTATATCAAATTCCATTTTTATGAAATCTTTAAATTCATCACATATCAACAACTTTATGATTTGTAGTAAAATTAAGTCATCAACATATAATGAAACAATGTGCAAATTTTTATGTTT

mRNA sequence

TGTCTCTAAGAAACCCAAAACCCAACACTAAAATGGCCACCACTCAAATTTTGCAGAGATCCAACACCAAAGTTGAAGAATTTGCAAGAGCCATTGTAGAAAAGGAATTTGTTCCAAATATCATCGTGAATAATGCAGCTTTGATCAATAGAAATGGTAAAATATGGGAAGTGGATGCGCAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCGAATATTATGCGCCATTTCATTCCTCTTATGATTTCTAAGAAGCAAGGGATTATCATCAACATGTCTTCTATTTCGGGGAGAACTGCACATGCACTGTGTTCACCATATTGTGCATCAAAATGGGCGGTTGAAGGAGTAAGCAAAGCGGTGGCAAAAGAAGTCCCAGAGGGAGTGGCAATTGTGAGCTTAGATCCGGGCATTATATATACTGATATGTTGGTCTCTTGTCTTGGTCATTTTGCTCCACAATATCAATCCCCTCAACATTGGGCTTCCAAAGCAGCAACCATGATTCTTAATCTTACTCCACTAGACAATGGAGCATCTCTGGCCGTTGAAGATCCAGGCACTTTGCCCAATCTTGAATAATTTTCTCTTTATTTATAAATTTAATCTTTAAAATATTGTAAAATTTTGAAGCGAATAACGCTAATAATGTAGTTTCCATTTGTGTTATTGCAAGTATTTGTATATCAAATTCCATTTTTATGAAATCTTTAAATTCATCACATATCAACAACTTTATGATTTGTAGTAAAATTAAGTCATCAACATATAATGAAACAATGTGCAAATTTTTATGTTT

Coding sequence (CDS)

ATGGCCACCACTCAAATTTTGCAGAGATCCAACACCAAAGTTGAAGAATTTGCAAGAGCCATTGTAGAAAAGGAATTTGTTCCAAATATCATCGTGAATAATGCAGCTTTGATCAATAGAAATGGTAAAATATGGGAAGTGGATGCGCAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCGAATATTATGCGCCATTTCATTCCTCTTATGATTTCTAAGAAGCAAGGGATTATCATCAACATGTCTTCTATTTCGGGGAGAACTGCACATGCACTGTGTTCACCATATTGTGCATCAAAATGGGCGGTTGAAGGAGTAAGCAAAGCGGTGGCAAAAGAAGTCCCAGAGGGAGTGGCAATTGTGAGCTTAGATCCGGGCATTATATATACTGATATGTTGGTCTCTTGTCTTGGTCATTTTGCTCCACAATATCAATCCCCTCAACATTGGGCTTCCAAAGCAGCAACCATGATTCTTAATCTTACTCCACTAGACAATGGAGCATCTCTGGCCGTTGAAGATCCAGGCACTTTGCCCAATCTTGAATAA

Protein sequence

MATTQILQRSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMRHFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLDPGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAVEDPGTLPNLE
Homology
[Close]
BLAST of Cp4.1LG01g16940 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 9.9e-60
Identity = 111/168 (66.07%), Postives = 139/168 (82.74%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           +SN+ VEE A  IVEK+ VP+IIVNNA  IN+N KIWEV A++FDNV+DTNVKG+AN++R
Sbjct: 75  KSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVLR 134

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLM+ +KQGII+NMSS  GR+  AL +PYCASKWA+EG+S+AVAKEV EG+A+V+L+
Sbjct: 135 HFIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCASKWAIEGLSRAVAKEVVEGMAVVALN 194

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I T++L SC G+ A  YQ+P  WA KAATMILNLT  DNG SL V
Sbjct: 195 PGVINTELLTSCFGNSASLYQAPDAWAVKAATMILNLTAGDNGGSLTV 242

[Close]
BLAST of Cp4.1LG01g16940 vs. Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.3e-13
Identity = 42/125 (33.60%), Postives = 77/125 (61.60%), Query Frame = 1 

Query: 13  KVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMRHFIP 72
           +V+E  + +V +    +++VNNA  I ++  +  +  QE+D+VIDTN+KG+ N ++   P
Sbjct: 66  EVKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTP 125

Query: 73  LMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEV-PEGVAIVSLDPGI 132
            M+ ++ G IIN++SI G   +   + Y A+K  V G++K  A+E+   G+ + ++ PG 
Sbjct: 126 QMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGF 185

Query: 133 IYTDM 137
           I +DM
Sbjct: 186 IVSDM 189

[Close]
BLAST of Cp4.1LG01g16940 vs. Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.3e-13
Identity = 42/125 (33.60%), Postives = 77/125 (61.60%), Query Frame = 1 

Query: 13  KVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMRHFIP 72
           +V+E  + +V +    +++VNNA  I ++  +  +  QE+D+VIDTN+KG+ N ++   P
Sbjct: 66  EVKEMIKEVVSQFGSVDVLVNNAG-ITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTP 125

Query: 73  LMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEV-PEGVAIVSLDPGI 132
            M+ ++ G IIN++SI G   +   + Y A+K  V G++K  A+E+   G+ + ++ PG 
Sbjct: 126 QMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGF 185

Query: 133 IYTDM 137
           I +DM
Sbjct: 186 IVSDM 189

[Close]
BLAST of Cp4.1LG01g16940 vs. Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13
Identity = 42/125 (33.60%), Postives = 77/125 (61.60%), Query Frame = 1 

Query: 13  KVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMRHFIP 72
           +V+   + +V +    +++VNNA  I R+  +  +  QE+D+VIDTN+KG+ N ++   P
Sbjct: 68  EVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 127

Query: 73  LMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEV-PEGVAIVSLDPGI 132
            M+ ++ G IIN+SS+ G   +   + Y A+K  V G++K+ A+E+   G+ + ++ PG 
Sbjct: 128 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 187

Query: 133 IYTDM 137
           I +DM
Sbjct: 188 IVSDM 191

[Close]
BLAST of Cp4.1LG01g16940 vs. Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-13
Identity = 42/125 (33.60%), Postives = 77/125 (61.60%), Query Frame = 1 

Query: 13  KVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMRHFIP 72
           +V+   + +V +    +++VNNA  I R+  +  +  QE+D+VIDTN+KG+ N ++   P
Sbjct: 68  EVKAMIKEVVSQFGSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 127

Query: 73  LMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEV-PEGVAIVSLDPGI 132
            M+ ++ G IIN+SS+ G   +   + Y A+K  V G++K+ A+E+   G+ + ++ PG 
Sbjct: 128 QMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGF 187

Query: 133 IYTDM 137
           I +DM
Sbjct: 188 IVSDM 191

[Close]
BLAST of Cp4.1LG01g16940 vs. TrEMBL
Match: U5GNJ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.0e-59
Identity = 117/168 (69.64%), Postives = 139/168 (82.74%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           +SN+ VEE AR +VEK+ VP+IIVNNA  IN+N KIWEV  +EFD+VIDTNVKGIAN++R
Sbjct: 84  KSNSSVEELARVVVEKKGVPDIIVNNAGTINQNKKIWEVSEEEFDSVIDTNVKGIANMLR 143

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLMI  KQGII+NMSS  GR+  AL +PYCASKWAVEG+S++VAKE+PEG+AIV+L+
Sbjct: 144 HFIPLMIPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKELPEGMAIVALN 203

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I+TDML SC G  A  YQ P  WA KAATMILNLT  DNGASL V
Sbjct: 204 PGVIHTDMLTSCFGTSASLYQDPDTWALKAATMILNLTEADNGASLTV 251

[Close]
BLAST of Cp4.1LG01g16940 vs. TrEMBL
Match: A0A061G839_THECC (NAD(P)-binding Rossmann-fold superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_027102 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.6e-59
Identity = 114/168 (67.86%), Postives = 139/168 (82.74%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           RSN+ VEE AR ++EK+ VP+IIVNNA  IN+N +IWEV A+EFD VIDTNVKG+AN+MR
Sbjct: 71  RSNSSVEELARLVMEKKVVPDIIVNNAGTINKNNRIWEVPAEEFDTVIDTNVKGVANVMR 130

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLMI K+QGII+NMSS  GR+  AL +PYCASKWA+EG+SKAVAKE+P+G A+V+L 
Sbjct: 131 HFIPLMIPKRQGIIVNMSSGWGRSGAALVAPYCASKWAIEGLSKAVAKEMPDGFAVVALS 190

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I T+ML SC G  A  YQ+P+ W+ KAATMILNLT  DNGASL V
Sbjct: 191 PGVINTEMLQSCFGSSASGYQTPEAWSFKAATMILNLTAADNGASLTV 238

[Close]
BLAST of Cp4.1LG01g16940 vs. TrEMBL
Match: W9QIQ8_9ROSA (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Morus notabilis GN=L484_016160 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-58
Identity = 111/167 (66.47%), Postives = 138/167 (82.63%), Query Frame = 1 

Query: 10  SNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMRH 69
           SN  +EE A  ++EK  +P+I+VNNA  IN+N +IWEV  +EFD VI TNVKGIAN++RH
Sbjct: 191 SNNSIEELAHVVMEKNGIPDIVVNNAGAINKNNRIWEVTEEEFDTVISTNVKGIANVLRH 250

Query: 70  FIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLDP 129
           FIPLM+ KKQGII+NMSS  GR+  AL +PYCASKWAVEG++++VAKE+PEG+AIV+L+P
Sbjct: 251 FIPLMLPKKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLTRSVAKELPEGMAIVALNP 310

Query: 130 GIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           G+I TDMLVSC G+ A  YQ+P+ WASKAATMILNLT  DNGASL V
Sbjct: 311 GVINTDMLVSCFGNSAELYQTPESWASKAATMILNLTVADNGASLTV 357

[Close]
BLAST of Cp4.1LG01g16940 vs. TrEMBL
Match: A0A067LDB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.9e-58
Identity = 109/168 (64.88%), Postives = 141/168 (83.93%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           RSN+ VEE A+A++EK+ VP+IIVNNA  INRN K+WEV  +EFD VIDTNVKG+AN++R
Sbjct: 72  RSNSSVEELAKAVMEKKGVPDIIVNNAGTINRNNKLWEVPVEEFDTVIDTNVKGVANVLR 131

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLM+  K+GII+NMSS  GR+  AL +PYCASKWA+EG++++VAKE+P+G+A+++L+
Sbjct: 132 HFIPLMLPNKRGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTRSVAKELPDGMAVIALN 191

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I+T+ML SC G  A  YQ+P  WASKAATMILNLT  DNGASL V
Sbjct: 192 PGVIHTEMLQSCFGTSASLYQAPDAWASKAATMILNLTGADNGASLTV 239

[Close]
BLAST of Cp4.1LG01g16940 vs. TrEMBL
Match: B9SPD4_RICCO (Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.8e-58
Identity = 113/167 (67.66%), Postives = 139/167 (83.23%), Query Frame = 1 

Query: 10  SNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMRH 69
           SN+ VEE A+AI+EK+ VP+IIVNNA  IN+N KIWEV  +EFD VIDTNVKGIAN++RH
Sbjct: 86  SNSSVEELAKAIMEKKGVPDIIVNNAGTINKNNKIWEVPVEEFDTVIDTNVKGIANVLRH 145

Query: 70  FIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLDP 129
           FIPLM+  KQGII+NMSS  GR+  AL +PYCASKWAVEG+S++VAKE+P+G+A+V+L+P
Sbjct: 146 FIPLMLPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGMSRSVAKELPDGMAVVALNP 205

Query: 130 GIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           G+I+T+ML SC G  A  YQ+P  WA KAATMILNLT  DNGASL V
Sbjct: 206 GVIHTEMLQSCFGTSASLYQAPDAWALKAATMILNLTGADNGASLTV 252

[Close]
BLAST of Cp4.1LG01g16940 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 231.1 bits (588), Expect = 5.6e-61
Identity = 111/168 (66.07%), Postives = 139/168 (82.74%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           +SN+ VEE A  IVEK+ VP+IIVNNA  IN+N KIWEV A++FDNV+DTNVKG+AN++R
Sbjct: 75  KSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVLR 134

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLM+ +KQGII+NMSS  GR+  AL +PYCASKWA+EG+S+AVAKEV EG+A+V+L+
Sbjct: 135 HFIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCASKWAIEGLSRAVAKEVVEGMAVVALN 194

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I T++L SC G+ A  YQ+P  WA KAATMILNLT  DNG SL V
Sbjct: 195 PGVINTELLTSCFGNSASLYQAPDAWAVKAATMILNLTAGDNGGSLTV 242

[Close]
BLAST of Cp4.1LG01g16940 vs. TAIR10
Match: AT5G10050.1 (AT5G10050.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 6.5e-09
Identity = 37/137 (27.01%), Postives = 72/137 (52.55%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           +S+  V +    +++K    +++VNNA  +   G + E      +N  +TNV G   + +
Sbjct: 62  QSDQNVSKVLSEVIDKFGKIDVLVNNAG-VQCVGPLAETPISAMENTFNTNVFGSMRMTQ 121

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEV-PEGVAIVSL 128
             +P M+SKK+G I+N+ SI+          Y A+K A+  ++  +  E+ P G+ ++++
Sbjct: 122 AVVPHMVSKKKGKIVNVGSITVMAPGPWAGVYTATKAAIHALTDTLRLELRPFGIDVINV 181

Query: 129 DPGIIYTDMLVSCLGHF 145
            PG I T++  S +  F
Sbjct: 182 VPGGIRTNIANSAVATF 197

[Close]
BLAST of Cp4.1LG01g16940 vs. TAIR10
Match: AT3G51680.1 (AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08
Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 1 

Query: 14  VEEFARAIVEKEFVPNIIVNNAALINRNGK---IWEVDAQEFDNVIDTNVKGIANIMRHF 73
           VE      V +    +I+ NNA ++    K   I + DA EFD+V+  NV+G+   M+H 
Sbjct: 100 VENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLGMKHG 159

Query: 74  IPLMISKK-QGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPE-GVAIVSLD 133
              MI +  +G II+ +S++G         Y ASK A+ G++K  A E+ + G+ +  + 
Sbjct: 160 ARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGKYGIRVNCIS 219

Query: 134 PGIIYTDMLVS 140
           P  + T MLV+
Sbjct: 220 PFGVATSMLVN 230

[Close]
BLAST of Cp4.1LG01g16940 vs. TAIR10
Match: AT1G52340.1 (AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.7e-07
Identity = 35/115 (30.43%), Postives = 60/115 (52.17%), Query Frame = 1 

Query: 29  NIIVNNAALINRN-GKIWEVDAQEFDNVIDTNVKGIANIMRHFIPLMISKKQGIIINMSS 88
           +I++NNA L       I      EF+   D NVKG    M+H   +MI +K+G I+++ S
Sbjct: 101 DILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCS 160

Query: 89  ISGRTAHALCSPYCASKWAVEGVSKAVAKEVPE-GVAIVSLDPGIIYTDMLVSCL 142
           + G         Y  SK AV G++++VA E+ + G+ +  + P  + T + ++ L
Sbjct: 161 VGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHL 215

[Close]
BLAST of Cp4.1LG01g16940 vs. TAIR10
Match: AT4G03140.1 (AT4G03140.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 42/158 (26.58%), Postives = 72/158 (45.57%), Query Frame = 1 

Query: 12  TKVEEFARAI---VEKEFVPNIIVNNAALINRNG-KIWEVDAQEFDNVIDTNVKGIANIM 71
           TK  + A A+   V      +I+ NNA +  +    I ++D   FD VI+TNV+G+   +
Sbjct: 136 TKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVINTNVRGVMAGI 195

Query: 72  RHFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEV-PEGVAIVS 131
           +H   +MI +  G II   S++G         Y  SK AV G+ ++ A E+    + +  
Sbjct: 196 KHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIRVNC 255

Query: 132 LDPGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILN 165
           + P  I T  ++  +    P     +      +T +LN
Sbjct: 256 ISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLN 293

[Close]
BLAST of Cp4.1LG01g16940 vs. NCBI nr
Match: gi|659129579|ref|XP_008464744.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-77
Identity = 144/176 (81.82%), Postives = 158/176 (89.77%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           RSNT+VEEFARA VE E VPNIIVNNA LINRNGK+WE+DA EFDNVIDTNVKGIAN+MR
Sbjct: 78  RSNTEVEEFARATVENELVPNIIVNNAGLINRNGKMWELDAHEFDNVIDTNVKGIANVMR 137

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLMIS  +GIIINMSS++GR +H L +PYCASKW VEG+SKA+AKEVPEG+ IVSLD
Sbjct: 138 HFIPLMISSNKGIIINMSSMAGRDSHELIAPYCASKWGVEGLSKAIAKEVPEGMGIVSLD 197

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAVEDPGTLPN 185
           PG+IYTDML+SCL  FAP YQSPQHWASKAATMILNLT L NGASL VEDPGTLPN
Sbjct: 198 PGLIYTDMLLSCLPDFAPNYQSPQHWASKAATMILNLTALHNGASLTVEDPGTLPN 253

[Close]
BLAST of Cp4.1LG01g16940 vs. NCBI nr
Match: gi|449462820|ref|XP_004149138.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 1.9e-74
Identity = 142/175 (81.14%), Postives = 154/175 (88.00%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           RSNTKVEEFARA VE E VPNIIVNNA LINR+ KIWE+DAQEFDNVIDTNVKGIANIMR
Sbjct: 77  RSNTKVEEFARATVENELVPNIIVNNAGLINRSCKIWELDAQEFDNVIDTNVKGIANIMR 136

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLMIS  +GIIINMSSI+GR A  L +PYCASKW VEG+SKA+AKEVPEG+ IVSLD
Sbjct: 137 HFIPLMISSNKGIIINMSSIAGRDARELIAPYCASKWGVEGLSKAIAKEVPEGMGIVSLD 196

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAVEDPGTLP 184
           PG+I+TDML+SCL   AP YQSPQHWASKAATMILNLT LDNG SL VEDPG +P
Sbjct: 197 PGLIFTDMLLSCLPDSAPNYQSPQHWASKAATMILNLTALDNGTSLTVEDPGIVP 251

[Close]
BLAST of Cp4.1LG01g16940 vs. NCBI nr
Match: gi|1009146418|ref|XP_015890871.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase [Ziziphus jujuba])

HSP 1 Score: 241.1 bits (614), Expect = 1.5e-60
Identity = 117/168 (69.64%), Postives = 141/168 (83.93%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           RSN+ VEE AR +VEK+ VP+IIVNNA  INRN KIWEV  +EFD VIDTNVKG+AN++R
Sbjct: 75  RSNSSVEELARLVVEKKGVPDIIVNNAGTINRNNKIWEVPVEEFDTVIDTNVKGLANVLR 134

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLM++ KQGII+NMSS  GR+  AL +PYCASKWAVEG+SK+VAKE+PEG+A+V+L+
Sbjct: 135 HFIPLMLTNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSKSVAKELPEGMAVVALN 194

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I TDML SC G+ A  YQ+P+ WA KAATMILNLT  DNGASL V
Sbjct: 195 PGVINTDMLASCFGNSAALYQTPEAWALKAATMILNLTAADNGASLTV 242

[Close]
BLAST of Cp4.1LG01g16940 vs. NCBI nr
Match: gi|729325015|ref|XP_010534693.1| (PREDICTED: 3-oxoacyl-[acyl-carrier-protein])

HSP 1 Score: 238.0 bits (606), Expect = 1.3e-59
Identity = 117/168 (69.64%), Postives = 140/168 (83.33%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           +SN+ VEE ARA+VEK+ VP+IIVNNA  IN+N KIW+V  +EFD VIDTNVKGIA+++R
Sbjct: 75  KSNSSVEELARAVVEKKCVPDIIVNNAGTINKNNKIWDVPVEEFDAVIDTNVKGIASVLR 134

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLMI  KQGII+NMSS  GR+  AL +PYCASKWAVEG+S+AVAKEVPEG+A+V+L+
Sbjct: 135 HFIPLMIPHKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRAVAKEVPEGMAVVALN 194

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I TDML SC G+ A  YQ+P  WA KAATMILNLT  DNGASL V
Sbjct: 195 PGVINTDMLASCFGNSASLYQAPDTWAVKAATMILNLTAADNGASLTV 242

[Close]
BLAST of Cp4.1LG01g16940 vs. NCBI nr
Match: gi|743849145|ref|XP_011028396.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase [Populus euphratica])

HSP 1 Score: 236.9 bits (603), Expect = 2.9e-59
Identity = 117/168 (69.64%), Postives = 139/168 (82.74%), Query Frame = 1 

Query: 9   RSNTKVEEFARAIVEKEFVPNIIVNNAALINRNGKIWEVDAQEFDNVIDTNVKGIANIMR 68
           +SN+ VEE AR +VEK+ VP+IIVNNA  IN+N KIWEV  +EFD+VIDTNVKGIAN++R
Sbjct: 84  KSNSSVEELARVVVEKKGVPDIIVNNAGTINQNKKIWEVSEEEFDSVIDTNVKGIANMLR 143

Query: 69  HFIPLMISKKQGIIINMSSISGRTAHALCSPYCASKWAVEGVSKAVAKEVPEGVAIVSLD 128
           HFIPLMI  KQGII+NMSS  GR+  AL +PYCASKWAVEG+S++VAKE+PEG+AIV+L+
Sbjct: 144 HFIPLMIPNKQGIIVNMSSGWGRSGAALVAPYCASKWAVEGLSRSVAKELPEGMAIVALN 203

Query: 129 PGIIYTDMLVSCLGHFAPQYQSPQHWASKAATMILNLTPLDNGASLAV 177
           PG+I+TDML SC G  A  YQ P  WA KAATMILNLT  DNGASL V
Sbjct: 204 PGVIHTDMLTSCFGTSASLYQDPDTWALKAATMILNLTEADNGASLTV 251

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTALR_ARATH9.9e-6066.07NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P... [more]
FABG_STAEQ5.3e-1333.603-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
FABG_STAES5.3e-1333.603-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
FABG_STAAR6.9e-1333.603-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain... [more]
FABG_STAAS6.9e-1333.603-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain... [more]
BLAST of Cp4.1LG01g16940 vs. TrEMBL
Match NameE-valueIdentityDescription
U5GNJ2_POPTR2.0e-5969.64Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1[more]
A0A061G839_THECC2.6e-5967.86NAD(P)-binding Rossmann-fold superfamily protein isoform 1 OS=Theobroma cacao GN... [more]
W9QIQ8_9ROSA2.2e-5866.473-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Morus notabilis GN=L484_01616... [more]
A0A067LDB8_JATCU2.9e-5864.88Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1[more]
B9SPD4_RICCO3.8e-5867.66Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=... [more]
BLAST of Cp4.1LG01g16940 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10310.15.6e-6166.07 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT5G10050.16.5e-0927.01 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G51680.14.2e-0832.06 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G52340.12.7e-0730.43 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT4G03140.11.3e-0626.58 NAD(P)-binding Rossmann-fold superfamily protein[more]
BLAST of Cp4.1LG01g16940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129579|ref|XP_008464744.1|1.4e-7781.82PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo][more]
gi|449462820|ref|XP_004149138.1|1.9e-7481.14PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus][more]
gi|1009146418|ref|XP_015890871.1|1.5e-6069.64PREDICTED: NADPH-dependent pterin aldehyde reductase [Ziziphus jujuba][more]
gi|729325015|ref|XP_010534693.1|1.3e-5969.64PREDICTED: 3-oxoacyl-[acyl-carrier-protein][more]
gi|743849145|ref|XP_011028396.1|2.9e-5969.64PREDICTED: NADPH-dependent pterin aldehyde reductase [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR020904Sc_DH/Rdtase_CS
IPR016040NAD(P)-bd_dom
IPR002347SDR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0042335 cuticle development
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006760 folic acid-containing compound metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009409 response to cold
biological_process GO:0000038 very long-chain fatty acid metabolic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0005835 fatty acid synthase complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
molecular_function GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16940.1Cp4.1LG01g16940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00080SDRFAMILYcoord: 100..119
score: 7.7E-8coord: 26..37
score: 7.7E-8coord: 80..88
score: 7.
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 120..137
score: 7.4E-15coord: 26..37
score: 7.4E-15coord: 100..119
score: 7.4E-15coord: 74..90
score: 7.4
IPR002347Short-chain dehydrogenase/reductase SDRPANTHERPTHR24322FAMILY NOT NAMEDcoord: 100..130
score: 9.8E-51coord: 9..84
score: 9.8
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 10..137
score: 8.8
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 12..143
score: 1.0
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 13..178
score: 2.43
IPR020904Short-chain dehydrogenase/reductase, conserved sitePROSITEPS00061ADH_SHORTcoord: 87..115
scor
NoneNo IPR availablePANTHERPTHR24322:SF500SUBFAMILY NOT NAMEDcoord: 100..130
score: 9.8E-51coord: 9..84
score: 9.8