Cp4.1LG01g16880 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16880
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionShort-chain dehydrogenase, putative
LocationCp4.1LG01 : 10832956 .. 10833597 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACATCTCACAATGAATCCTCTCGAAAGGTGTTGATCACTGGGGTTAGCAAGGGCTTAGGAAGAGCTTTAGCCTTGGAGCTGGCTACCCGCGGCCACACCATAATCGGCTGCTCACGTGATCAAACCAAACTTGATTCCCTTCAAGAACAGCTTTCTAAGTCCTCTCTAATTCAGCATTTCCTCTTCAAACTCGATGTGGTATGTAAGTATTTGAATTCCACTTCACAAATTTTACAAAAACTAATTGGAAANTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTAGAAATCGAACGACAACGTTGAAGAATTTGCACAAATTGTGAGAAAAGAGAAACTTATTCCTGATATCATTGGTATTTTCGATAATTCGTTTATTAATTTGTTATACAAAAAAACGGGTAATGACGTAGTTTTTGGATGTATCATAGTGAATAATGCAGGTTTGGCTCATGGCAAAGCCAAGATATGGGAACTTGATGCGCGAGATTTTGATAATGTTATTGACACCAATATCAAAGGAACTGCAAATATTTTACGTCATTTCATTCCACTTATGATGCATAACAACTACGGAATTATTGTTAATATGTCATCGAGTGCTGGAAGATCTACCCATGCAGATGTACGTGATTGA

mRNA sequence

ATGGCCACATCTCACAATGAATCCTCTCGAAAGGTGTTGATCACTGGGGTTAGCAAGGGCTTAGGAAGAGCTTTAGCCTTGGAGCTGGCTACCCGCGGCCACACCATAATCGGCTGCTCACGTGATCAAACCAAACTTGATTCCCTTCAAGAACAGCTTTCTAAGTCCTCTCTAATTCAGCATTTCCTCTTCAAACTCGATGTGAAATCGAACGACAACGTTGAAGAATTTGCACAAATTGTGAGAAAAGAGAAACTTATTCCTGATATCATTGGTTTGGCTCATGGCAAAGCCAAGATATGGGAACTTGATGCGCGAGATTTTGATAATGTTATTGACACCAATATCAAAGGAACTGCAAATATTTTACGTCATTTCATTCCACTTATGATGCATAACAACTACGGAATTATTGTTAATATGTCATCGAGTGCTGGAAGATCTACCCATGCAGATGTACGTGATTGA

Coding sequence (CDS)

ATGGCCACATCTCACAATGAATCCTCTCGAAAGGTGTTGATCACTGGGGTTAGCAAGGGCTTAGGAAGAGCTTTAGCCTTGGAGCTGGCTACCCGCGGCCACACCATAATCGGCTGCTCACGTGATCAAACCAAACTTGATTCCCTTCAAGAACAGCTTTCTAAGTCCTCTCTAATTCAGCATTTCCTCTTCAAACTCGATGTGAAATCGAACGACAACGTTGAAGAATTTGCACAAATTGTGAGAAAAGAGAAACTTATTCCTGATATCATTGGTTTGGCTCATGGCAAAGCCAAGATATGGGAACTTGATGCGCGAGATTTTGATAATGTTATTGACACCAATATCAAAGGAACTGCAAATATTTTACGTCATTTCATTCCACTTATGATGCATAACAACTACGGAATTATTGTTAATATGTCATCGAGTGCTGGAAGATCTACCCATGCAGATGTACGTGATTGA

Protein sequence

MATSHNESSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVKSNDNVEEFAQIVRKEKLIPDIIGLAHGKAKIWELDARDFDNVIDTNIKGTANILRHFIPLMMHNNYGIIVNMSSSAGRSTHADVRD
Homology
[Close]
BLAST of Cp4.1LG01g16880 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-41
Identity = 89/145 (61.38%), Postives = 108/145 (74.48%), Query Frame = 1 

Query: 8   SSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLD 67
           ++R VLITGVSKGLGRALALELA RGHT+IGC+R Q KL +LQ +LS S+   H L   D
Sbjct: 16  AARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSST--NHLLLTAD 75

Query: 68  VKSNDNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANIL 127
           VKSN +VEE A  + ++K +PDII    G  +  +KIWE+ A DFDNV+DTN+KG AN+L
Sbjct: 76  VKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVL 135

Query: 128 RHFIPLMMHNNYGIIVNMSSSAGRS 149
           RHFIPLM+    GIIVNMSS  GRS
Sbjct: 136 RHFIPLMLPRKQGIIVNMSSGWGRS 158

[Close]
BLAST of Cp4.1LG01g16880 vs. Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12
Identity = 40/142 (28.17%), Postives = 81/142 (57.04%), Query Frame = 1 

Query: 9   SRKVLITGVSKGLGRALALELATRGHTI-IGCSRDQTKLDSLQEQLSKSSLIQHFLFKLD 68
           ++  L+TG S+G+GR++AL+LA  G+ + +  +  + K +++ E++ K+  ++ F  + +
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI-KAKGVESFAIQAN 61

Query: 69  VKSNDNVEEFAQIVRKEKLIPDIIGLAHGKAK---IWELDARDFDNVIDTNIKGTANILR 128
           V   D V+E  + V  +    D++    G  K   +  +  +++D+VIDTN+KG  N ++
Sbjct: 62  VAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQ 121

Query: 129 HFIPLMMHNNYGIIVNMSSSAG 147
              P M+    G I+N++S  G
Sbjct: 122 KVTPQMLRQRSGAIINLTSIVG 142

[Close]
BLAST of Cp4.1LG01g16880 vs. Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12
Identity = 40/142 (28.17%), Postives = 81/142 (57.04%), Query Frame = 1 

Query: 9   SRKVLITGVSKGLGRALALELATRGHTI-IGCSRDQTKLDSLQEQLSKSSLIQHFLFKLD 68
           ++  L+TG S+G+GR++AL+LA  G+ + +  +  + K +++ E++ K+  ++ F  + +
Sbjct: 2   NKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEI-KAKGVESFAIQAN 61

Query: 69  VKSNDNVEEFAQIVRKEKLIPDIIGLAHGKAK---IWELDARDFDNVIDTNIKGTANILR 128
           V   D V+E  + V  +    D++    G  K   +  +  +++D+VIDTN+KG  N ++
Sbjct: 62  VAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQ 121

Query: 129 HFIPLMMHNNYGIIVNMSSSAG 147
              P M+    G I+N++S  G
Sbjct: 122 KVTPQMLRQRSGAIINLTSIVG 142

[Close]
BLAST of Cp4.1LG01g16880 vs. Swiss-Prot
Match: Y2036_STAES (Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2036 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-11
Identity = 38/137 (27.74%), Postives = 79/137 (57.66%), Query Frame = 1 

Query: 13  LITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVKSND 72
           ++TG S G+G A+A +L+ +G +I+   R++ +L+ + +QL+  + +       DV    
Sbjct: 10  VVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLNTPAKV----VSADVTVKS 69

Query: 73  NVEEFAQIVRKEKLIPDIIGLAHGKA---KIWELDARDFDNVIDTNIKGTANILRHFIPL 132
           N+++  + V       DI+  + G++   KI + +   +D +ID NIKGT ++L+  +P 
Sbjct: 70  NIDDMLKAVIDHFGHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPY 129

Query: 133 MMHNNYGIIVNMSSSAG 147
           ++  + G I+N++S +G
Sbjct: 130 LLKQSSGHIINLASVSG 142

[Close]
BLAST of Cp4.1LG01g16880 vs. Swiss-Prot
Match: Y2049_STAEQ (Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP2049 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-11
Identity = 38/137 (27.74%), Postives = 79/137 (57.66%), Query Frame = 1 

Query: 13  LITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVKSND 72
           ++TG S G+G A+A +L+ +G +I+   R++ +L+ + +QL+  + +       DV    
Sbjct: 10  VVTGASSGIGEAIAKKLSQQGASIVLVGRNEQRLNEIAQQLNTPAKV----VSADVTVKS 69

Query: 73  NVEEFAQIVRKEKLIPDIIGLAHGKA---KIWELDARDFDNVIDTNIKGTANILRHFIPL 132
           N+++  + V       DI+  + G++   KI + +   +D +ID NIKGT ++L+  +P 
Sbjct: 70  NIDDMLKAVIDHFGHIDIVVNSAGQSLSSKITDYNVEQWDTMIDVNIKGTLHVLQATLPY 129

Query: 133 MMHNNYGIIVNMSSSAG 147
           ++  + G I+N++S +G
Sbjct: 130 LLKQSSGHIINLASVSG 142

[Close]
BLAST of Cp4.1LG01g16880 vs. TrEMBL
Match: A0A0A0KMF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-55
Identity = 114/147 (77.55%), Postives = 124/147 (84.35%), Query Frame = 1 

Query: 10  RKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVK 69
           RKVLITGVSKGLGRALALELA RGHTIIGCSRDQ KLDSLQ+QLS +SL QHF FKLDVK
Sbjct: 25  RKVLITGVSKGLGRALALELANRGHTIIGCSRDQVKLDSLQQQLSTTSLNQHFFFKLDVK 84

Query: 70  SNDNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANILRH 129
           S++NV+EFAQ V K  L+P I+    GLAH  AKIWELDA +FDNVIDTN+KG ANILRH
Sbjct: 85  SDNNVQEFAQFVAKNNLVPHILVNNAGLAHKSAKIWELDAEEFDNVIDTNVKGIANILRH 144

Query: 130 FIPLMMHNNYGIIVNMSSSAGRSTHAD 153
           FIPLM+ NN GIIVNMSS AGRS H D
Sbjct: 145 FIPLMIQNNNGIIVNMSSGAGRSAHED 171

[Close]
BLAST of Cp4.1LG01g16880 vs. TrEMBL
Match: A0A0A0LYI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570190 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-45
Identity = 100/144 (69.44%), Postives = 117/144 (81.25%), Query Frame = 1 

Query: 9   SRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSK-SSLIQHFLFKLD 68
           S+KVLITGVS+GLGRALALELAT GHT+IGCSRDQTKLDSLQ QLSK S    H L  +D
Sbjct: 17  SKKVLITGVSRGLGRALALELATYGHTVIGCSRDQTKLDSLQLQLSKVSPNANHLLLSID 76

Query: 69  VKSNDNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANIL 128
           VK N +VEEFA+ V + +LIPDII    G+A+ ++ +WE+D +DFDNVIDTNIKGT NIL
Sbjct: 77  VKCNRSVEEFARTVMENELIPDIIVNNAGVANKRSNMWEIDVQDFDNVIDTNIKGTTNIL 136

Query: 129 RHFIPLMMHNNYGIIVNMSSSAGR 148
           RHFIPLM+  N GIIVN+SS AGR
Sbjct: 137 RHFIPLMIPYNQGIIVNISSDAGR 160

[Close]
BLAST of Cp4.1LG01g16880 vs. TrEMBL
Match: A0A0A0LW25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570200 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.2e-43
Identity = 95/147 (64.63%), Postives = 116/147 (78.91%), Query Frame = 1 

Query: 9   SRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSK-SSLIQHFLFKLD 68
           S+KVLITGVSKG+GRALALELAT GHT+IGCSRDQTKLDSLQ QLSK S ++ H L  +D
Sbjct: 17  SKKVLITGVSKGIGRALALELATYGHTVIGCSRDQTKLDSLQLQLSKVSPIVNHLLLSVD 76

Query: 69  VKSNDNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANIL 128
           VK N +VEEFA+ V + +L+PDII    G+ +    +WE+D +DFD VID NIKGT+NIL
Sbjct: 77  VKCNRSVEEFARTVVENELVPDIIVNNAGVVNKVGNMWEIDVQDFDTVIDINIKGTSNIL 136

Query: 129 RHFIPLMMHNNYGIIVNMSSSAGRSTH 151
           RHFIPLM+ +N GIIVN+SS  GR  +
Sbjct: 137 RHFIPLMIPHNQGIIVNISSLCGRDNN 163

[Close]
BLAST of Cp4.1LG01g16880 vs. TrEMBL
Match: A0A061G9B5_THECC (NAD(P)-binding Rossmann-fold superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_027102 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.6e-40
Identity = 84/143 (58.74%), Postives = 111/143 (77.62%), Query Frame = 1 

Query: 6   NESSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFK 65
           N +++ VL+TGVSKGLGRALALEL+ RGHT+IGCSR Q KL+SLQ +L+     +H L  
Sbjct: 10  NGAAKTVLVTGVSKGLGRALALELSKRGHTVIGCSRAQEKLNSLQSELAAPD--RHLLLN 69

Query: 66  LDVKSNDNVEEFAQIVRKEKLIPDIIGLAHGKAKIWELDARDFDNVIDTNIKGTANILRH 125
           +DV+SN +VEE A++V ++K++PDIIG  +   +IWE+ A +FD VIDTN+KG AN++RH
Sbjct: 70  VDVRSNSSVEELARLVMEKKVVPDIIGTINKNNRIWEVPAEEFDTVIDTNVKGVANVMRH 129

Query: 126 FIPLMMHNNYGIIVNMSSSAGRS 149
           FIPLM+    GIIVNMSS  GRS
Sbjct: 130 FIPLMIPKRQGIIVNMSSGWGRS 150

[Close]
BLAST of Cp4.1LG01g16880 vs. TrEMBL
Match: B9SPD4_RICCO (Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.6e-39
Identity = 88/152 (57.89%), Postives = 105/152 (69.08%), Query Frame = 1 

Query: 1   MATSHNESSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQ 60
           M    N   +KV+ITGVSKGLGRALALELA RGHT+IGCSR Q KL+SLQ +L       
Sbjct: 17  MTGGPNAGGKKVMITGVSKGLGRALALELAKRGHTVIGCSRAQDKLNSLQSELPSDHNNH 76

Query: 61  HFLFKLDVKSNDNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNI 120
           H L   DV SN +VEE A+ + ++K +PDII    G  +   KIWE+   +FD VIDTN+
Sbjct: 77  HLLLNADVSSNSSVEELAKAIMEKKGVPDIIVNNAGTINKNNKIWEVPVEEFDTVIDTNV 136

Query: 121 KGTANILRHFIPLMMHNNYGIIVNMSSSAGRS 149
           KG AN+LRHFIPLM+ N  GIIVNMSS  GRS
Sbjct: 137 KGIANVLRHFIPLMLPNKQGIIVNMSSGWGRS 168

[Close]
BLAST of Cp4.1LG01g16880 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 170.2 bits (430), Expect = 9.7e-43
Identity = 89/145 (61.38%), Postives = 108/145 (74.48%), Query Frame = 1 

Query: 8   SSRKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLD 67
           ++R VLITGVSKGLGRALALELA RGHT+IGC+R Q KL +LQ +LS S+   H L   D
Sbjct: 16  AARTVLITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQSELSSST--NHLLLTAD 75

Query: 68  VKSNDNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANIL 127
           VKSN +VEE A  + ++K +PDII    G  +  +KIWE+ A DFDNV+DTN+KG AN+L
Sbjct: 76  VKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKNSKIWEVSAEDFDNVMDTNVKGVANVL 135

Query: 128 RHFIPLMMHNNYGIIVNMSSSAGRS 149
           RHFIPLM+    GIIVNMSS  GRS
Sbjct: 136 RHFIPLMLPRKQGIIVNMSSGWGRS 158

[Close]
BLAST of Cp4.1LG01g16880 vs. TAIR10
Match: AT2G29370.1 (AT2G29370.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-10
Identity = 51/148 (34.46%), Postives = 74/148 (50.00%), Query Frame = 1 

Query: 13  LITGVSKGLGRALALELATRGHTIIGCSRDQTKL-DSLQEQLSKSSLIQHFLFKLDVKSN 72
           L+TG SKGLG+A+  ELA  G  +  C+RD+T+L +SL+E  +K   +Q      DV S 
Sbjct: 22  LVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLREWQAKG--LQVTTSVCDVSSR 81

Query: 73  DNVEEFAQIVRKEKLIPDIIGLAHGKAKI-------------WELDARDFDNVIDTNIKG 132
           D         ++EKL+  +  L  GK  I              E  A +F  +I TN++ 
Sbjct: 82  D---------QREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEFSFIIATNLES 141

Query: 133 TANILRHFIPLMMHNNYGIIVNMSSSAG 147
           T +  +   PL+  +  G IV MSS AG
Sbjct: 142 TFHFSQLAHPLLKASGSGNIVLMSSVAG 158

[Close]
BLAST of Cp4.1LG01g16880 vs. TAIR10
Match: AT3G55290.1 (AT3G55290.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-10
Identity = 46/143 (32.17%), Postives = 72/143 (50.35%), Query Frame = 1 

Query: 12  VLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLS--KSSLIQHFLFKLDVK 71
           VL+TG S G+GR + L+LA  G  +I  +R   +L+SL  +++   S+ IQ    +LDV 
Sbjct: 23  VLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTGIQAAALELDVS 82

Query: 72  SN-----DNVEEFAQIVRKEKLIPDIIGLAHGKAKIWELDARDFDNVIDTNIKGTANILR 131
           S+       V E   I  K   + +  G+        +L   ++DNV  TN+KG   + +
Sbjct: 83  SDAATIQKAVREAWDIFGKIDALINNAGIRGNVKSSLDLSEDEWDNVFKTNLKGPWLVSK 142

Query: 132 HFIPLMMH-NNYGIIVNMSSSAG 147
           H   LM      G ++N+SS AG
Sbjct: 143 HVCMLMRDAKRGGSVINISSIAG 165

[Close]
BLAST of Cp4.1LG01g16880 vs. TAIR10
Match: AT3G55310.1 (AT3G55310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09
Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 1 

Query: 12  VLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLS--KSSLIQHFLFKLDVK 71
           VL+TG S G+GR + L+LA  G  +I  +R   +L+SL  +++   S+ IQ    +LDV 
Sbjct: 22  VLVTGASSGIGREICLDLAKAGCQVIAAARRVDRLNSLCSEINSFSSTGIQAAALELDVS 81

Query: 72  SN-----DNVEEFAQIVRKEKLIPDIIGLAHGKAKIWELDARDFDNVIDTNIKGTANILR 131
           S+       V E   I  K   + +  G+        +L   ++DNV +TN+KG   + +
Sbjct: 82  SDAATIQKAVREAWDIFGKIDALINNAGIRGNVKLSLDLSEDEWDNVFNTNLKGPWLVAK 141

Query: 132 HFIPLMMH-NNYGIIVNMSSSAG 147
           +   LM      G ++N+SS AG
Sbjct: 142 YVCVLMRDAKRGGSVINISSVAG 164

[Close]
BLAST of Cp4.1LG01g16880 vs. TAIR10
Match: AT3G46170.1 (AT3G46170.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.2e-09
Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 1 

Query: 12  VLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSL--IQHFLFKLDVK 71
           VL+TG S G+GR + L+L   G  II  +R   +L+SL  +++ SS   IQ    KLDV 
Sbjct: 31  VLVTGASSGIGREICLDLGKAGCKIIAVARRVDRLNSLCSEINSSSSTGIQAAALKLDVT 90

Query: 72  SN-DNVEEFAQ----IVRKEKLIPDIIGLAHGKAKIWELDARDFDNVIDTNIKGTANILR 131
           S+   +++  Q    I  K   + +  G+        +L   ++DNV  TN+ G   + +
Sbjct: 91  SDAATIQKVVQGAWGIFGKIDALINNAGIRGNVKSSLDLSKEEWDNVFKTNLTGPWLVSK 150

Query: 132 HFIPLMMHNNY-GIIVNMSSSAG 147
           +   LM      G ++N+SS AG
Sbjct: 151 YVCVLMRDAKLGGSVINISSIAG 173

[Close]
BLAST of Cp4.1LG01g16880 vs. NCBI nr
Match: gi|449462804|ref|XP_004149130.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 2.7e-55
Identity = 114/147 (77.55%), Postives = 124/147 (84.35%), Query Frame = 1 

Query: 10  RKVLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVK 69
           RKVLITGVSKGLGRALALELA RGHTIIGCSRDQ KLDSLQ+QLS +SL QHF FKLDVK
Sbjct: 25  RKVLITGVSKGLGRALALELANRGHTIIGCSRDQVKLDSLQQQLSTTSLNQHFFFKLDVK 84

Query: 70  SNDNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANILRH 129
           S++NV+EFAQ V K  L+P I+    GLAH  AKIWELDA +FDNVIDTN+KG ANILRH
Sbjct: 85  SDNNVQEFAQFVAKNNLVPHILVNNAGLAHKSAKIWELDAEEFDNVIDTNVKGIANILRH 144

Query: 130 FIPLMMHNNYGIIVNMSSSAGRSTHAD 153
           FIPLM+ NN GIIVNMSS AGRS H D
Sbjct: 145 FIPLMIQNNNGIIVNMSSGAGRSAHED 171

[Close]
BLAST of Cp4.1LG01g16880 vs. NCBI nr
Match: gi|659129577|ref|XP_008464743.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X4 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52
Identity = 106/141 (75.18%), Postives = 119/141 (84.40%), Query Frame = 1 

Query: 12  VLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVKSN 71
           VLITGVSKGLGRALALELA RGHTIIGCSRDQ KLDSLQ+QLS +S  +HF FKLDV S+
Sbjct: 3   VLITGVSKGLGRALALELANRGHTIIGCSRDQIKLDSLQQQLSNTSPNRHFFFKLDVTSD 62

Query: 72  DNVEEFAQIVRKEKLIPDIIGLAHGKAKIWELDARDFDNVIDTNIKGTANILRHFIPLMM 131
            +V+EFAQ V K  L+P I+GLAH  AKIWEL+A +FDNVIDTN+KG ANILRHF+PLM+
Sbjct: 63  THVQEFAQFVAKNNLVPRILGLAHRSAKIWELEAEEFDNVIDTNVKGIANILRHFVPLMI 122

Query: 132 HNNYGIIVNMSSSAGRSTHAD 153
            NN GIIVNMSS AGRS H D
Sbjct: 123 QNNNGIIVNMSSGAGRSAHED 143

[Close]
BLAST of Cp4.1LG01g16880 vs. NCBI nr
Match: gi|659129573|ref|XP_008464741.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X2 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52
Identity = 106/141 (75.18%), Postives = 119/141 (84.40%), Query Frame = 1 

Query: 12  VLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVKSN 71
           VLITGVSKGLGRALALELA RGHTIIGCSRDQ KLDSLQ+QLS +S  +HF FKLDV S+
Sbjct: 3   VLITGVSKGLGRALALELANRGHTIIGCSRDQIKLDSLQQQLSNTSPNRHFFFKLDVTSD 62

Query: 72  DNVEEFAQIVRKEKLIPDIIGLAHGKAKIWELDARDFDNVIDTNIKGTANILRHFIPLMM 131
            +V+EFAQ V K  L+P I+GLAH  AKIWEL+A +FDNVIDTN+KG ANILRHF+PLM+
Sbjct: 63  THVQEFAQFVAKNNLVPRILGLAHRSAKIWELEAEEFDNVIDTNVKGIANILRHFVPLMI 122

Query: 132 HNNYGIIVNMSSSAGRSTHAD 153
            NN GIIVNMSS AGRS H D
Sbjct: 123 QNNNGIIVNMSSGAGRSAHED 143

[Close]
BLAST of Cp4.1LG01g16880 vs. NCBI nr
Match: gi|659129575|ref|XP_008464742.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X3 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 106/145 (73.10%), Postives = 119/145 (82.07%), Query Frame = 1 

Query: 12  VLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVKSN 71
           VLITGVSKGLGRALALELA RGHTIIGCSRDQ KLDSLQ+QLS +S  +HF FKLDV S+
Sbjct: 3   VLITGVSKGLGRALALELANRGHTIIGCSRDQIKLDSLQQQLSNTSPNRHFFFKLDVTSD 62

Query: 72  DNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANILRHFI 131
            +V+EFAQ V K  L+P I+    GLAH  AKIWEL+A +FDNVIDTN+KG ANILRHF+
Sbjct: 63  THVQEFAQFVAKNNLVPRILVNNAGLAHRSAKIWELEAEEFDNVIDTNVKGIANILRHFV 122

Query: 132 PLMMHNNYGIIVNMSSSAGRSTHAD 153
           PLM+ NN GIIVNMSS AGRS H D
Sbjct: 123 PLMIQNNNGIIVNMSSGAGRSAHED 147

[Close]
BLAST of Cp4.1LG01g16880 vs. NCBI nr
Match: gi|659129571|ref|XP_008464740.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X1 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 106/145 (73.10%), Postives = 119/145 (82.07%), Query Frame = 1 

Query: 12  VLITGVSKGLGRALALELATRGHTIIGCSRDQTKLDSLQEQLSKSSLIQHFLFKLDVKSN 71
           VLITGVSKGLGRALALELA RGHTIIGCSRDQ KLDSLQ+QLS +S  +HF FKLDV S+
Sbjct: 3   VLITGVSKGLGRALALELANRGHTIIGCSRDQIKLDSLQQQLSNTSPNRHFFFKLDVTSD 62

Query: 72  DNVEEFAQIVRKEKLIPDII----GLAHGKAKIWELDARDFDNVIDTNIKGTANILRHFI 131
            +V+EFAQ V K  L+P I+    GLAH  AKIWEL+A +FDNVIDTN+KG ANILRHF+
Sbjct: 63  THVQEFAQFVAKNNLVPRILVNNAGLAHRSAKIWELEAEEFDNVIDTNVKGIANILRHFV 122

Query: 132 PLMMHNNYGIIVNMSSSAGRSTHAD 153
           PLM+ NN GIIVNMSS AGRS H D
Sbjct: 123 PLMIQNNNGIIVNMSSGAGRSAHED 147

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTALR_ARATH1.7e-4161.38NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P... [more]
FABG_STAES6.4e-1228.173-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
FABG_STAEQ6.4e-1228.173-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus epidermidis (s... [more]
Y2036_STAES9.2e-1127.74Uncharacterized oxidoreductase SE_2036 OS=Staphylococcus epidermidis (strain ATC... [more]
Y2049_STAEQ9.2e-1127.74Uncharacterized oxidoreductase SERP2049 OS=Staphylococcus epidermidis (strain AT... [more]
BLAST of Cp4.1LG01g16880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMF3_CUCSA1.9e-5577.55Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1[more]
A0A0A0LYI3_CUCSA3.1e-4569.44Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570190 PE=3 SV=1[more]
A0A0A0LW25_CUCSA2.2e-4364.63Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570200 PE=3 SV=1[more]
A0A061G9B5_THECC6.6e-4058.74NAD(P)-binding Rossmann-fold superfamily protein isoform 2 OS=Theobroma cacao GN... [more]
B9SPD4_RICCO5.6e-3957.89Short-chain dehydrogenase, putative OS=Ricinus communis GN=RCOM_0497310 PE=3 SV=... [more]
BLAST of Cp4.1LG01g16880 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10310.19.7e-4361.38 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G29370.14.9e-1034.46 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G55290.16.4e-1032.17 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G55310.12.4e-0931.47 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT3G46170.19.2e-0931.47 NAD(P)-binding Rossmann-fold superfamily protein[more]
BLAST of Cp4.1LG01g16880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462804|ref|XP_004149130.1|2.7e-5577.55PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus][more]
gi|659129577|ref|XP_008464743.1|2.2e-5275.18PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X4 [Cucumis melo][more]
gi|659129573|ref|XP_008464741.1|2.2e-5275.18PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X2 [Cucumis melo][more]
gi|659129575|ref|XP_008464742.1|1.2e-5073.10PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X3 [Cucumis melo][more]
gi|659129571|ref|XP_008464740.1|1.2e-5073.10PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR002347SDR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0042335 cuticle development
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006760 folic acid-containing compound metabolic process
biological_process GO:0009409 response to cold
biological_process GO:0000038 very long-chain fatty acid metabolic process
biological_process GO:0019752 carboxylic acid metabolic process
biological_process GO:0044238 primary metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005835 fatty acid synthase complex
cellular_component GO:0044424 intracellular part
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16880.1Cp4.1LG01g16880.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 130..146
score: 4.6E-8coord: 11..28
score: 4.
IPR002347Short-chain dehydrogenase/reductase SDRPANTHERPTHR24322FAMILY NOT NAMEDcoord: 14..140
score: 8.3
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 11..149
score: 5.2
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 8..148
score: 7.7
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 8..149
score: 1.04
NoneNo IPR availablePANTHERPTHR24322:SF500SUBFAMILY NOT NAMEDcoord: 14..140
score: 8.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g16880CmaCh04G019190Cucurbita maxima (Rimu)cmacpeB732
Cp4.1LG01g16880CmaCh04G019030Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g16880CmoCh04G020390Cucurbita moschata (Rifu)cmocpeB680
Cp4.1LG01g16880CmoCh04G020250Cucurbita moschata (Rifu)cmocpeB682
Cp4.1LG01g16880CmoCh04G020080Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g16880MELO3C026451Melon (DHL92) v3.5.1cpemeB374
Cp4.1LG01g16880ClCG11G000350Watermelon (Charleston Gray)cpewcgB369
Cp4.1LG01g16880CSPI05G00120Wild cucumber (PI 183967)cpecpiB449
Cp4.1LG01g16880Lsi11G000730Bottle gourd (USVL1VR-Ls)cpelsiB319
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g16880Cucumber (Chinese Long) v3cpecucB0557
Cp4.1LG01g16880Wax gourdcpewgoB0559
Cp4.1LG01g16880Cucurbita moschata (Rifu)cmocpeB686
Cp4.1LG01g16880Cucumber (Chinese Long) v2cpecuB449
Cp4.1LG01g16880Watermelon (Charleston Gray)cpewcgB365
Cp4.1LG01g16880Watermelon (97103) v1cpewmB455
Cp4.1LG01g16880Cucumber (Gy14) v2cgybcpeB663
Cp4.1LG01g16880Melon (DHL92) v3.6.1cpemedB433