CmoCh04G020390 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATTCGCTTTGGAGAAGACAAATCCATGGCTGCAACCATTTCAAACCATGAATTACAACAAGAAACCAAGAAGACAGTTCTAATAACTGGGGTGACCAGAGGGATAGGACGAGCTTTGGCATTGGAGTTTGCGAAACATGGCCATCTAATTATTGGTTGCGGCCGCGACAAAACCAATTTGGATTCACTTCAGCTGCAACTCTCTAATGCTTCCCCGCAAAGCCATTTGCTCTTCATCGCTGATGTGGTTCGTAATGCTTTTTCCTTTGCTATGTCTTAGTGTTTATCTGTTTAATTTTTTTTTATTTTAATTTTGCAGAAGTCAGATGACAGCGTCCGACAAATGGCACACACGGTCCGGGACAAACTTGGTTCTCTTGACATCATTGATATGTTTGTGCTACAGTGTTTTTTTCTTCATTTCGGATAAAGTAATGTAAACACGAAGTTTATGATATGAACTAAGAGACCTCACTCATACAACATACTTCGACCAAGATGTGAAGAAAATGTTGTTGAAATTATAAAAAAAAAATATATATTTCAATTCATG GTATTCGCTTTGGAGAAGACAAATCCATGGCTGCAACCATTTCAAACCATGAATTACAACAAGAAACCAAGAAGACAGTTCTAATAACTGGGGTGACCAGAGGGATAGGACGAGCTTTGGCATTGGAGTTTGCGAAACATGGCCATCTAATTATTGGTTGCGGCCGCGACAAAACCAATTTGGATTCACTTCAGCTGCAACTCTCTAATGCTTCCCCGCAAAGCCATTTGCTCTTCATCGCTGATGTGAAGTCAGATGACAGCGTCCGACAAATGGCACACACGGTCCGGGACAAACTTGGTTCTCTTGACATCATTGATATGTTTGTGCTACAGTGTTTTTTTCTTCATTTCGGATAAAGTAATGTAAACACGAAGTTTATGATATGAACTAAGAGACCTCACTCATACAACATACTTCGACCAAGATGTGAAGAAAATGTTGTTGAAATTATAAAAAAAAAATATATATTTCAATTCATG ATGGCTGCAACCATTTCAAACCATGAATTACAACAAGAAACCAAGAAGACAGTTCTAATAACTGGGGTGACCAGAGGGATAGGACGAGCTTTGGCATTGGAGTTTGCGAAACATGGCCATCTAATTATTGGTTGCGGCCGCGACAAAACCAATTTGGATTCACTTCAGCTGCAACTCTCTAATGCTTCCCCGCAAAGCCATTTGCTCTTCATCGCTGATGTGAAGTCAGATGACAGCGTCCGACAAATGGCACACACGGTCCGGGACAAACTTGGTTCTCTTGACATCATTGATATGTTTGTGCTACAGTGTTTTTTTCTTCATTTCGGATAA
BLAST of CmoCh04G020390 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18 Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of CmoCh04G020390 vs. Swiss-Prot
Match: DHRS3_MOUSE (Short-chain dehydrogenase/reductase 3 OS=Mus musculus GN=Dhrs3 PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 2.6e-07 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 1
BLAST of CmoCh04G020390 vs. Swiss-Prot
Match: DHRS3_HUMAN (Short-chain dehydrogenase/reductase 3 OS=Homo sapiens GN=DHRS3 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 1
BLAST of CmoCh04G020390 vs. Swiss-Prot
Match: DHRS3_BOVIN (Short-chain dehydrogenase/reductase 3 OS=Bos taurus GN=DHRS3 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 1
BLAST of CmoCh04G020390 vs. Swiss-Prot
Match: DNRU_STRS5 (Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.2e-06 Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 1
BLAST of CmoCh04G020390 vs. TrEMBL
Match: A0A0A0KIN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G011650 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of CmoCh04G020390 vs. TrEMBL
Match: A0A0D3DNW4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.3e-18 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of CmoCh04G020390 vs. TrEMBL
Match: A0A078G6P9_BRANA (BnaC08g14160D protein OS=Brassica napus GN=BnaC08g14160D PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.9e-18 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of CmoCh04G020390 vs. TrEMBL
Match: M4DPK6_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.0e-18 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of CmoCh04G020390 vs. TrEMBL
Match: A0A078G653_BRANA (BnaA08g25840D protein OS=Brassica napus GN=BnaA08g25840D PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.0e-18 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of CmoCh04G020390 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 93.6 bits (231), Expect = 8.2e-20 Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of CmoCh04G020390 vs. NCBI nr
Match: gi|778697976|ref|XP_004149629.2| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X1 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of CmoCh04G020390 vs. NCBI nr
Match: gi|700194398|gb|KGN49575.1| (hypothetical protein Csa_5G011650 [Cucumis sativus]) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-25 Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 1
BLAST of CmoCh04G020390 vs. NCBI nr
Match: gi|778697979|ref|XP_011654452.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like isoform X2 [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23 Identity = 58/88 (65.91%), Postives = 74/88 (84.09%), Query Frame = 1
BLAST of CmoCh04G020390 vs. NCBI nr
Match: gi|922553675|ref|XP_013604856.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase [Brassica oleracea var. oleracea]) HSP 1 Score: 100.5 bits (249), Expect = 1.9e-18 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of CmoCh04G020390 vs. NCBI nr
Match: gi|674912508|emb|CDY20642.1| (BnaC08g14160D [Brassica napus]) HSP 1 Score: 99.0 bits (245), Expect = 5.5e-18 Identity = 49/82 (59.76%), Postives = 63/82 (76.83%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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