Cp4.1LG01g16420 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g16420
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptiontRNA pseudouridine synthase
LocationCp4.1LG01 : 10072495 .. 10078600 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACATATAAACTAGATGGTACAAAATAATAGATAACGATAGGCCAAAACAGAACATTCGTAAAAATTAAGGAAAACCATAAACAGAAGAAAAAACAGATAGTTTTGCGTCGACCAACTTACGTTAATTAGAGTGCAACAAAAAATCTCAAAATACGGATAACAAGTACCAGGATGCAAAATCTTAAAATCTCAAAATAAGGATGCAAGAAAAACAGGTTCCAGGTTCATGTTTTCCTAGTTTCAGGTTCCATCATCCTGCAGACATCAAAATGAACCCCAACCAGTGGCCTATGGCACTAGATAATGCCAAAACTCAGGCTCATCCGTGTTTCAACCCAAAAACCAATAAATTGGCTTTGGAGAAAGAGCCTGTTCTAGACTCCAGCCCTGATTATTCATAGTTTTTTATGGGGAAGCCATTTCGACTGTCATTAGGAATATTGGAATTTAACCGGAAAAACATGAATGGAACAACAGTCGGGGATAAAAAAAACAAAATTCCAGAAATACAAGGCCTGTGTTTAGATTTTCAATCCTCCAGATGCATTTGTTGCAATAAAAATATCCTCCAGATAACATACTTTCTTCAGCGTCGTAGTAACAATAAATCAAAAACATAATCTACAATGGTAAAGTTACAGATCGATTCACCAGAGCCCATTTCACGTCAAATCCAAAGAGACAAAACAAATTAAAGTATACTGCAAAGGGAAATAAGAGATCCTGCAAGTAGAGGTTAGAGATGGAATGAACAAACTATAGTCTTAGTAAATCGAGTAATATAACCGTGAATTCAATGGCGACCATACTTATCGAAACTGTTATACCTGACACTGGGAATAGAGAGGTGAAGAACAGGGCTGTGCCTTCGTAACTCGAGTTAAGGTTTCTACTTCCAATTTAGGGGACCTATATAATGGATGCCGCCGCTACAATTTGGCTGCTACGCTGTGCGGCGCATGAATTAAGTGATACAAGGGAAGAAATTAGGGTTCTCTCGCAACATAATTGGGCTAGGGCTACTTTTAAATCGTATTGGGCTTATAAAATATGAGCCCATTTGAAGCCCAAGCCCATGTGTTTATAACTGAGAAGCACGTGAGCATTGAGACGACATGTCGAACTGTCATTCGACATGTGGAAAATTAAAACGGCGAATACGACCTAGCGAAGCAAACCTCCATCGTCTACCTTGGGAACTTGTTCAACTCATGGCGGAGTTCAACCTTTAAACTTCCGCGAGAACACTTGCTACATTGTTTAAGCTTTGGAATCAGTGTTCGATTCTCATAATCTTGGCGGGAGCGGCGGAAATCAATGACGGAGAACCAGAAGCATAGGCTAGAGTTCAGTTCCGATTCATCACCTCAAAGGCCATTGAAAATTGGAAAGACTACGAACGAAGATCTCCCTGGCGATAAGGAGGAAGCAGAATCCATGAACCGTAACCCTGGAATCCAACGCTACCTTGTCGCAGTCGAATATATAGGAACTCGTTTCTCTGGTTCTCAGCAGCAGCCCAACTGTCGTACGGTGGTCGGCGTGCTTGAGGTACACCGCCTTTGCCATCTTTCATTACTCTGTGTATCGTTCTTAACCGATGAAACTCTTTGAAATGGAACATAATTTCTTTGTATCATTAAGAAACGGGTTGAACAATGAGTCTCTTGCATTACTCTATAAATGATTACTTTTACTTCTCAGGAAGCGTTCCGGAAGTTTATCGGTCAATCAGTTTCAGTGTTTTGTTCTAGCAGAACTGTAAGTTTTTCTTATTCTGGATATTTGTTCCTTTTTGTTATATGAAAATCAGTTTTATTGCTGCTATTAGAATGTTCAGTGTACTTGTAGGGTAGCTTCCACGACTTTTATCTTGCTGAATCTTCAGTCCTCTGGTAGTTCTTCTCCCACTAGCTTTGATGTGTGCAGAGAAGGATATGGAACTGAATTGGTAGTTTAACTGTAGGGTTTATGTTCTTTTGAGATGCATGAACTTGCCTCTATTGTTCTAAGTCGGATTTTAAAACAAAACCATTGGAACTGTGAGATCCCATATCAGTTAGAGAGGAGAACGAAGTATTCATTATAAGGGTGTAGAAACCTCTCCTTGATAGATGCGTGTTTAAAATCGTGAGACTGATGGAGATAGATAACGGGCCAAAGCGGACAATATCTGTTAGCGGTGGGCTTGGGCTATTACAAATGATATCAGAGCCAGACATCGAGCGGTGTGCTAGCGAGGGCATTGGTCCCTAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGAAGAGGAGAATGAAGCATTCCTTAGAAGGGTGTAGAAACCTCTCCCTGACAGATGCGTTTTAAAATAGTGAGGCTGACGACGATACATAATGGGCCAAAGCGGACAATATCTGTTAGTGGTGGGCATGGGTTGTTACAAATGGTATCAGAGCCAGACACTGAGTGGTGTGCCAGCGAGGGTGCTGGCCCCCAAGGGGGTGGCTTGTGAGATCCTACATCGGTTGGAGAGGGGAACGAAGCTTTCCTTATAAGGGTGTGAAAACCTCTCCCTAACAGACACGTTTTAAAGCCGTAAGGCTGATGGCGATACATAACGGGCCAAAGCGGACAGTATTTGTTAGAGCCAGACACCGAGCGGCGTGCCAGCAAGGATGCTGGCCCCCAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAAGGGAACGAAGCTTTCCTTATAAGGGAGTGAAAACCTCTCCCTAACAGACACGTTTTAAAACTGTAAGGCTGACGGCGATACATAACGGGCCAAAGCAGACAGTATTTGTTAGAGCCAGACACCGAGCGGTGTGCCAGCAAGGACGCTAGCCCCCAAGGGGGTGGATTTTGAGATCCCACATCGTTTGGAGAGGGGAACGAAGCATTCCTCATAAGGGTGTGGAAACCTCTCCTAATAGACGCATTTTAAAATTGTGAGACTAATGGCATACGTAATGGGCCATTGCAGATAATACCTGTTGTTAGTGGTGGGCTTGGGCTGTTATAGTTGTTTTTCTGACTTGTTATAGTTGTTTTTCTGACTTGTTTGTTGCAGACTAGAGTGCATCTTGCTCCATATTCACCTGTTTTGAGGTGTGCTCGGTAGAAAGGGATCTGTTATTGAGCCGCTCTATTGACTTGATTGATTGCTTTGATAATCGTATTCCCATGCGTCATATTACATTTCTTGCTACCATAAGTAGATTAAGTTATCCCATTCACGTTGTGACTTTCCTTCTTTTTTCAATGAAGGATGCTGGAGTACATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCCGGAGAAGTGGTTTGTCCCTTTGTATAGAATATAAGCATCTCTCTCCCCTTTTCATATGTACACATAATATATGCTAACTAGATGAGTAATTTCCCCTGAAAACTTTTGTTCACTCGTGGACTTTGTTGTTGAGATAAAACTTTCTTATCCTTGAAAACATGAGTTTGAAGAAATGGTGCTCGACTTTGCTACAGAGATGCTAACTTCTTTTGCCTAACTATGATGCAGTTACCACCTCATGAACCGGGTGTCGTTCGCAGGGCCGTGAATCATTTCTTACAGGTTCGGTTCTCTGCTAGCCAATCCCTTTTTTGAGCTACTTTTGCTTCTCTCGATTTTCGTTGTTTTGATCTTGTGCTTCATTTTTAACTCAACGATGCTAAGTTATAGTCGTGTTAAAATTTCCATTTTCAAATTATAAACTTTATCTTCCCTTTTAAATTTGCAAGCATGTTAGAATCTTCCCTTTTACCAGTACTATTGACTATTGTTCATAGGCGGTAGATAAGCGAGTGTAATGGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGAATTTCCGTTTCGTGCTTCCCCCCAAAGTTTTAAAATGCGTCTGCTAGGGAGAGGTTTTCACACCAAGGATGTTTTGTTCCCCTTTGTTCCCCTATCCAACTTATGTGGGATCTCACAATTCACCCCCTTCGGGGCCCAGCATTCTTGCTGGCACACCGCATGGTGTCCAACCCCCCTTCAGGGCTCAGCCTCTTCATTGGCACATTGCTCATTGTCTGGCTCTGATACCATTTGTAACGGCCTAAGCCCACCGCTAACAGATATTGTCCTCTTTGGGCTTTTCCTTCCACACTTCCCCTCGAGGTTTTATAACGTGTCTGCTAAGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCTGTAACAACCCGACTTATCTTATAAATAGCGGTTAGGGCCGTTACAAAAGATAATTTTATTTATTTAAAAATTAATGAAAACTATGCAAAGGGTTTGGCTTGCTAAGGGTTACCGCAAGTCTGGGTCGTTTTAAATTAATGAAACCTTGTGCAAATGCGTTTTAAAGCCTAGAGGAGAAGGCCGAAAGGAACACAGCCCAAAGAGGACAATATCTGCTAGCGGTAAGCCTGGGTCGTTACAGTTTCATTCCTCCTCCAACCGATGTGGGATCTCACAGCGAGCACCTAAGAAAAATCTTCCTTTTTCCAGCTTCAGCCTTTGCTTTTTATTGTATGAGACAAAGAAAATGATGAAAGGTATCTGTGTCTGTTTTGATTCCAGAAAAATGACGGTGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTATCATGCTAGATATAAAGCTCAAGAGCGTACGTGAGTATCGTCCATCCATGCTTTAGTAGTTGATACCATCATTGCCTATTAGACAGTAGAATTAATTGTCCATACGTACATAACACAATTTTTTGCATCTCATGAAACATTTTCAGATACTTTTATCGGTTAGTTTCTGGGCCAGAAACTTTGTCAAGCTTTGACAAGGATCGAGTATGGCACGTGCCCGAGATACTGAATATTGGAGCCATGCAGGTATGAACAATTAACAGTGCAATGCTGGAGATCATGTCGATTTGAAATTACATTCAGGAACTGATACAACATTATTGGAATGTATGAATTCAGGAGGCATGTAAAGTGCTTGTTGGGCATCATGACTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGTCACTTAATACTAAAACTATTTATGTTCCCAGCTTATTATACATTTTGTTTGTAACAATGCCAGGGCGTGGTCGGGGGATGAAACTGTGTACGGTGTAATGTAAATTAGTTTCGATGTGCAGTGCAGGCAAACTCCCCAATGAGAACTCTTGATGAACTAGACGTTTGTGAGGTGGTTTCGACGCCTTATTTTCCATCGTCAATGGAGCGAAAGCAAAGGCAGGGCAAAGAAGAATGCGAGAATGAAGTGCTACATTCTGAAAGTTACGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTTTCGTTGTGACAGCACGAGCACGCTCGTTTCTCTATCATCAGGTAATAAACATAACCAACCCTAAGAGACTTTCTTTTCTAGTAATGGAGAAAAGGGTTTTACGAGATTGATTGATTGATTGATTAGTTATTCTGGACTCGAATATTTCTTAGGTAAGACTGATGGTTGGCGTTCTTAAAGCGGTCGGAACCGGAGATCTAACCGTAGGAGATGGTAGGTGGTTGGACTGCAACATATACAATAGAACATGGCCGTTTGAAGGTAGCTAGCTAACAGTAATATGGTCTTCTGTGTTATTTGCTGCAGTAGAAAGAATCTTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCTTGTGGACTCTACCTAGGACATGTCAAATATGATCTACCGCCGCCACCGACAGCGCCCACTGAATGAAACCGGAGGTTCCTTTCTTTTCATTTCCAATGTTATTTATTTGTATTGATTGCCAATGCAACTCTCCTTATTGTTGACATTCGAAAATCTATAGTTGAGCTGAACCCAATCCCAATCCCCATCCCATTCTGAACGGATTTCTTCTCCTTTTTATGAATGGGATTTTTAATGCTCAACTTGTAACGGCCCAGATCCACCGCTAGTAGATATTGTCCTTTTTGGACTTTTCCTTTCAGGCTTCCCCTCAAGGCTTGAAAACGCGCCT

mRNA sequence

AAAACATATAAACTAGATGGTACAAAATAATAGATAACGATAGGCCAAAACAGAACATTCGTAAAAATTAAGGAAAACCATAAACAGAAGAAAAAACAGATAGTTTTGCGTCGACCAACTTACGTTAATTAGAGTGCAACAAAAAATCTCAAAATACGGATAACAAGTACCAGGATGCAAAATCTTAAAATCTCAAAATAAGGATGCAAGAAAAACAGGTTCCAGGTTCATGTTTTCCTAGTTTCAGGTTCCATCATCCTGCAGACATCAAAATGAACCCCAACCAGTGGCCTATGGCACTAGATAATGCCAAAACTCAGGCTCATCCGTGTTTCAACCCAAAAACCAATAAATTGGCTTTGGAGAAAGAGCCTGTTCTAGACTCCAGCCCTGATTATTCATAGTTTTTTATGGGGAAGCCATTTCGACTGTCATTAGGAATATTGGAATTTAACCGGAAAAACATGAATGGAACAACAGTCGGGGATAAAAAAAACAAAATTCCAGAAATACAAGGCCTGTGTTTAGATTTTCAATCCTCCAGATGCATTTGTTGCAATAAAAATATCCTCCAGATAACATACTTTCTTCAGCGTCGTAGTAACAATAAATCAAAAACATAATCTACAATGGTAAAGTTACAGATCGATTCACCAGAGCCCATTTCACGTCAAATCCAAAGAGACAAAACAAATTAAAGTATACTGCAAAGGGAAATAAGAGATCCTGCAAGTAGAGGTTAGAGATGGAATGAACAAACTATAGTCTTAGTAAATCGAGTAATATAACCGTGAATTCAATGGCGACCATACTTATCGAAACTGTTATACCTGACACTGGGAATAGAGAGGTGAAGAACAGGGCTGTGCCTTCGTAACTCGAGTTAAGGTTTCTACTTCCAATTTAGGGGACCTATATAATGGATGCCGCCGCTACAATTTGGCTGCTACGCTGTGCGGCGCATGAATTAAGTGATACAAGGGAAGAAATTAGGGTTCTCTCGCAACATAATTGGGCTAGGGCTACTTTTAAATCGTATTGGGCTTATAAAATATGAGCCCATTTGAAGCCCAAGCCCATGTGTTTATAACTGAGAAGCACGTGAGCATTGAGACGACATGTCGAACTGTCATTCGACATGTGGAAAATTAAAACGGCGAATACGACCTAGCGAAGCAAACCTCCATCGTCTACCTTGGGAACTTGTTCAACTCATGGCGGAGTTCAACCTTTAAACTTCCGCGAGAACACTTGCTACATTGTTTAAGCTTTGGAATCAGTGTTCGATTCTCATAATCTTGGCGGGAGCGGCGGAAATCAATGACGGAGAACCAGAAGCATAGGCTAGAGTTCAGTTCCGATTCATCACCTCAAAGGCCATTGAAAATTGGAAAGACTACGAACGAAGATCTCCCTGGCGATAAGGAGGAAGCAGAATCCATGAACCGTAACCCTGGAATCCAACGCTACCTTGTCGCAGTCGAATATATAGGAACTCGTTTCTCTGGTTCTCAGCAGCAGCCCAACTGTCGTACGGTGGTCGGCGTGCTTGAGGAAGCGTTCCGGAAGTTTATCGGTCAATCAGTTTCAGTGTTTTGTTCTAGCAGAACTTGTACTTGTAGGGTAGCTTCCACGACTTTTATCTTGCTGAATCTTCAGTCCTCTGGTAGTTCTTCTCCCACTAGCTTTGATGTGTGCAGAGAAGGATATGGAACTGAATTGGATGCTGGAGTACATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCCGGAGAAGTGTTACCACCTCATGAACCGGGTGTCGTTCGCAGGGCCGTGAATCATTTCTTACAGAAAAATGACGGTGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTATCATGCTAGATATAAAGCTCAAGAGCGTACATACTTTTATCGGTTAGTTTCTGGGCCAGAAACTTTGTCAAGCTTTGACAAGGATCGAGTATGGCACGTGCCCGAGATACTGAATATTGGAGCCATGCAGGAGGCATGTAAAGTGCTTGTTGGGCATCATGACTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCCCCAATGAGAACTCTTGATGAACTAGACGTTTGTGAGGTGGTTTCGACGCCTTATTTTCCATCGTCAATGGAGCGAAAGCAAAGGCAGGGCAAAGAAGAATGCGAGAATGAAGTGCTACATTCTGAAAGTTACGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTTTCGTTGTGACAGCACGAGCACGCTCGTTTCTCTATCATCAGGTAAGACTGATGGTTGGCGTTCTTAAAGCGGTCGGAACCGGAGATCTAACCGTAGGAGATGTAGAAAGAATCTTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCTTGTGGACTCTACCTAGGACATGTCAAATATGATCTACCGCCGCCACCGACAGCGCCCACTGAATGAAACCGGAGGTTCCTTTCTTTTCATTTCCAATGTTATTTATTTGTATTGATTGCCAATGCAACTCTCCTTATTGTTGACATTCGAAAATCTATAGTTGAGCTGAACCCAATCCCAATCCCCATCCCATTCTGAACGGATTTCTTCTCCTTTTTATGAATGGGATTTTTAATGCTCAACTTGTAACGGCCCAGATCCACCGCTAGTAGATATTGTCCTTTTTGGACTTTTCCTTTCAGGCTTCCCCTCAAGGCTTGAAAACGCGCCT

Coding sequence (CDS)

ATGACGGAGAACCAGAAGCATAGGCTAGAGTTCAGTTCCGATTCATCACCTCAAAGGCCATTGAAAATTGGAAAGACTACGAACGAAGATCTCCCTGGCGATAAGGAGGAAGCAGAATCCATGAACCGTAACCCTGGAATCCAACGCTACCTTGTCGCAGTCGAATATATAGGAACTCGTTTCTCTGGTTCTCAGCAGCAGCCCAACTGTCGTACGGTGGTCGGCGTGCTTGAGGAAGCGTTCCGGAAGTTTATCGGTCAATCAGTTTCAGTGTTTTGTTCTAGCAGAACTTGTACTTGTAGGGTAGCTTCCACGACTTTTATCTTGCTGAATCTTCAGTCCTCTGGTAGTTCTTCTCCCACTAGCTTTGATGTGTGCAGAGAAGGATATGGAACTGAATTGGATGCTGGAGTACATGCCTTATCAAATGTTTGTCATGTTGATGTTGAGCGCATAAGCAAAAGAAAGCCCGGAGAAGTGTTACCACCTCATGAACCGGGTGTCGTTCGCAGGGCCGTGAATCATTTCTTACAGAAAAATGACGGTGATGTTACGGTAGTTGATGTTCGAAGTGTTCCTAATGATTATCATGCTAGATATAAAGCTCAAGAGCGTACATACTTTTATCGGTTAGTTTCTGGGCCAGAAACTTTGTCAAGCTTTGACAAGGATCGAGTATGGCACGTGCCCGAGATACTGAATATTGGAGCCATGCAGGAGGCATGTAAAGTGCTTGTTGGGCATCATGACTTTAGCTCCTTCAGGGCAGCTGGTTGTCAGGCAAACTCCCCAATGAGAACTCTTGATGAACTAGACGTTTGTGAGGTGGTTTCGACGCCTTATTTTCCATCGTCAATGGAGCGAAAGCAAAGGCAGGGCAAAGAAGAATGCGAGAATGAAGTGCTACATTCTGAAAGTTACGAGGTTGGATTTGGGATCAGGAGAAGGCATCGTTGTTTCGTTGTGACAGCACGAGCACGCTCGTTTCTCTATCATCAGGTAAGACTGATGGTTGGCGTTCTTAAAGCGGTCGGAACCGGAGATCTAACCGTAGGAGATGTAGAAAGAATCTTGGAAGCGAAGAATGTGAGTTCAGCAAGTCCGATGGCTCCTGCTTGTGGACTCTACCTAGGACATGTCAAATATGATCTACCGCCGCCACCGACAGCGCCCACTGAATGA

Protein sequence

MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSGSSSPTSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLPPPPTAPTE
Homology
[Close]
BLAST of Cp4.1LG01g16420 vs. Swiss-Prot
Match: TRUA_ROSDO (tRNA pseudouridine synthase A OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=truA PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-33
Identity = 90/252 (35.71%), Postives = 133/252 (52.78%), Query Frame = 1 

Query: 135 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPN 194
           DAGVHA++ V H D+ER             +P  +  A+N+ L+     + +    +V  
Sbjct: 52  DAGVHAIAQVAHCDLER-----------DWDPFRLSEALNYHLKP--APIAITACTAVDA 111

Query: 195 DYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSF 254
           ++HAR+ A++R Y +R++      ++  K  VW V + L++ AM+EA  +L+G HDF++F
Sbjct: 112 EWHARFSARQRQYLFRILCR-RAPATHQKGLVWQVKQKLDVTAMREAAALLIGQHDFTTF 171

Query: 255 RAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENEVLHSESYEVGFGIR 314
           R+  CQA SP++TLD LDV EV  TPY           G+E      +H +         
Sbjct: 172 RSTICQAESPVKTLDRLDVNEV-DTPY-----------GRE------IHFD--------- 231

Query: 315 RRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACG 374
                     RARSFL++QVR  VG L+ VG G  T  DV R L  ++ ++  P+ P  G
Sbjct: 232 ---------VRARSFLHNQVRSFVGTLERVGAGSSTPQDVARALALRDRAACGPVCPPHG 253

Query: 375 LYLGHVKYDLPP 387
           LYL HV YD PP
Sbjct: 292 LYLAHVVYDRPP 253

[Close]
BLAST of Cp4.1LG01g16420 vs. Swiss-Prot
Match: TRUA_BARHE (tRNA pseudouridine synthase A OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) GN=truA PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-32
Identity = 90/250 (36.00%), Postives = 129/250 (51.60%), Query Frame = 1 

Query: 135 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPN 194
           DAGVHA   V HVD E+  +              VR A+N  LQK   ++ ++ V++VP+
Sbjct: 52  DAGVHATGQVAHVDFEKNWRTH-----------TVRDALNAHLQKQGDNIAILHVQNVPD 111

Query: 195 DYHARYKAQERTYFYRLVS--GPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFS 254
            + AR+ A +R Y +++++   P  L++    RVW +P+ LN  AM EA + LVG HDF+
Sbjct: 112 SFDARFSAIKRHYLFKILNRRSPPALNT---KRVWWIPKPLNAQAMHEAAQKLVGKHDFT 171

Query: 255 SFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENEVLHSESYEVGFG 314
           +FR+A CQA SP+RTL+ LDV                QR+G+E                 
Sbjct: 172 TFRSAHCQAKSPIRTLERLDV----------------QREGEEI---------------- 231

Query: 315 IRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPA 374
                    + A+ARSFL+HQ+R   G L  VG G  T  D+E  L AK+ +    +AP 
Sbjct: 232 --------FLYAQARSFLHHQIRSFAGSLMEVGIGRWTTQDLEAALHAKDRTRCGMVAPP 247

Query: 375 CGLYLGHVKY 383
            GLYL  V+Y
Sbjct: 292 SGLYLTKVEY 247

[Close]
BLAST of Cp4.1LG01g16420 vs. Swiss-Prot
Match: TRUA_BARBK (tRNA pseudouridine synthase A OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=truA PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.5e-30
Identity = 85/250 (34.00%), Postives = 124/250 (49.60%), Query Frame = 1 

Query: 135 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPN 194
           DAGVHA   V HVD E+                 +  A+N  L++   ++ +++V ++P+
Sbjct: 52  DAGVHATGQVAHVDFEK-----------DWHVNTIHNALNAHLRQQGDNIAILNVENIPD 111

Query: 195 DYHARYKAQERTYFYRLVS--GPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFS 254
            + AR  A +R Y +++++   P  L++    RVW +P  LN  AM +A + LVG HDF+
Sbjct: 112 SFDARLSAVKRHYLFKILNRRAPPALNA---KRVWWLPRPLNADAMHKAAQKLVGKHDFT 171

Query: 255 SFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENEVLHSESYEVGFG 314
           +FR+A CQA SP+RTL+ LDV                QR+G+E                 
Sbjct: 172 TFRSAHCQAKSPIRTLECLDV----------------QREGEEI---------------- 231

Query: 315 IRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPA 374
                    + ARARSFL+HQ+R   G L  VG G  T  D+E  L AK+ +    +AP 
Sbjct: 232 --------FLYARARSFLHHQIRSFAGSLMEVGIGRWTAQDLEEALHAKDRARCGMVAPP 247

Query: 375 CGLYLGHVKY 383
            GLYL  V Y
Sbjct: 292 SGLYLTQVDY 247

[Close]
BLAST of Cp4.1LG01g16420 vs. Swiss-Prot
Match: TRUA_PARDP (tRNA pseudouridine synthase A OS=Paracoccus denitrificans (strain Pd 1222) GN=truA PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.7e-30
Identity = 90/252 (35.71%), Postives = 126/252 (50.00%), Query Frame = 1 

Query: 135 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPN 194
           DAGVHA   V H D+ R             +P  +  A+N  L+     V ++    V +
Sbjct: 55  DAGVHATGQVAHADLAR-----------DWDPFRLSEALNWHLKP--APVAILAAARVAD 114

Query: 195 DYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSF 254
           D+HAR+ A ER Y +RLV+    L+  D+ R W VP  L++ AM+     L+G HDF++F
Sbjct: 115 DFHARFSAHERRYLFRLVARRAPLTH-DRGRAWQVPHRLDLAAMRAGAAHLLGRHDFTTF 174

Query: 255 RAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENEVLHSESYEVGFGIR 314
           R+  CQANSP++TLDEL + E    P           QG+E                   
Sbjct: 175 RSTMCQANSPVKTLDELTIDE-AEIP-----------QGRE------------------- 234

Query: 315 RRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACG 374
             +R F+   RARSFL++QVR +VG L+ VG G    G V   L A + ++  P+ P  G
Sbjct: 235 --YRFFL---RARSFLHNQVRSIVGTLERVGAGAWPPGRVAEALAACDRAACGPVCPPQG 256

Query: 375 LYLGHVKYDLPP 387
           LYL  V Y+ PP
Sbjct: 295 LYLTGVGYETPP 256

[Close]
BLAST of Cp4.1LG01g16420 vs. Swiss-Prot
Match: TRUA_RUEST (tRNA pseudouridine synthase A OS=Ruegeria sp. (strain TM1040) GN=truA PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-29
Identity = 86/251 (34.26%), Postives = 126/251 (50.20%), Query Frame = 1 

Query: 135 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPN 194
           D GVH L  V H D+E+             +P  +  A+N+ L+     V +VD   V +
Sbjct: 52  DTGVHGLGQVAHCDLEK-----------NWDPFRLSEALNYHLKP--APVAIVDAALVDD 111

Query: 195 DYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSF 254
           ++HAR+ A ER Y +R++      ++ D+ +VW +   L++ AMQ    +L+G+HDF++F
Sbjct: 112 EWHARFSAVERQYLFRILMR-RAPATHDEGQVWQIKHDLDVAAMQAGANMLLGNHDFTTF 171

Query: 255 RAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENEVLHSESYEVGFGIR 314
           R++ CQA SP++TLDEL V             ER Q     E    V             
Sbjct: 172 RSSICQAASPVKTLDELRV-------------ERVQGLSGPEVHFHV------------- 231

Query: 315 RRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACG 374
                     RARSFL++QVR  VG L+ VGTG  +  DV+  LEAK+ ++  P+ P  G
Sbjct: 232 ----------RARSFLHNQVRSFVGTLERVGTGAWSPEDVKHALEAKDRAACGPVCPGHG 252

Query: 375 LYLGHVKYDLP 386
           LYL  V Y  P
Sbjct: 292 LYLARVGYPDP 252

[Close]
BLAST of Cp4.1LG01g16420 vs. TrEMBL
Match: A0A0A0KRX0_CUCSA (tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_5G586020 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 1.2e-151
Identity = 288/388 (74.23%), Postives = 303/388 (78.09%), Query Frame = 1 

Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGKTT+E   GD+EEAE+MN  PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDELFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSGSSSP 120
           F                        G      C +       A   FI           P
Sbjct: 61  F-----------------------YGSQQQPNCRTVVGALEEAFQKFI---------GQP 120

Query: 121 TSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKN 180
            S   C     +  DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVV +AVNHFLQK+
Sbjct: 121 VSV-FC----SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKH 180

Query: 181 DGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQE 240
           +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE LSSF+KDR WHVPE LNIGAMQE
Sbjct: 181 EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQE 240

Query: 241 ACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENE 300
           ACKVLVGHHDFSSFRAAGCQANSP+RTLDEL+VCEV STPYFP+SMERKQRQGKEE E E
Sbjct: 241 ACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQGKEESEIE 300

Query: 301 VLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEA 360
           V  SE+ EVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVG+GDLTVGDV RILEA
Sbjct: 301 VPCSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVGDVGRILEA 351

Query: 361 KNVSSASPMAPACGLYLGHVKYDLPPPP 389
           KNVSSA PMAPACGLYLGHVKYDLPP P
Sbjct: 361 KNVSSARPMAPACGLYLGHVKYDLPPAP 351

[Close]
BLAST of Cp4.1LG01g16420 vs. TrEMBL
Match: A0A061DW68_THECC (tRNA pseudouridine synthase OS=Theobroma cacao GN=TCM_006169 PE=3 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.2e-130
Identity = 257/410 (62.68%), Postives = 291/410 (70.98%), Query Frame = 1 

Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTN----EDLPGDKEEAES-MNRNPGIQRYLVAVE 60
           M+EN KH L  + +SS  RP KI KT +    E+   DK++ ES M++NP IQRYLVA+E
Sbjct: 1   MSENPKHSLSTTPESS--RPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIE 60

Query: 61  YIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSS 120
           YIGTRFSGSQQQPNCRTVVGVLEEAF KFIG                             
Sbjct: 61  YIGTRFSGSQQQPNCRTVVGVLEEAFLKFIG----------------------------- 120

Query: 121 GSSSPTSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNH 180
               P S   C     +  DAGVHALSNVCHVDVERISKRKPGEVLPPHEP VVRRAVNH
Sbjct: 121 ---QPVSI-FC----SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNH 180

Query: 181 FLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNI 240
           FLQK++GD+TV+DVR VPND+HARYKAQERTYFYRL+SG E LS+F+K+R WHVPE L++
Sbjct: 181 FLQKSEGDITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDL 240

Query: 241 GAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKE 300
            AMQEACKVLVGHHDFSSFRAAGCQA SP+RTLDEL V E   TPYFPS  E+KQ     
Sbjct: 241 YAMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSST 300

Query: 301 E--------------------CENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVR 360
           E                     ++EV  +   ++GFGIRRRH C+VVTARARSFLYHQVR
Sbjct: 301 EDSHACSREPEIDLPIDSFSNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVR 360

Query: 361 LMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLP 386
           L+VGVLK VGTG+LT  DVERIL AK V++ASPMAPA GLYLG VKYDLP
Sbjct: 361 LLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPAYGLYLGCVKYDLP 371

[Close]
BLAST of Cp4.1LG01g16420 vs. TrEMBL
Match: A0A061DY96_THECC (tRNA pseudouridine synthase OS=Theobroma cacao GN=TCM_006169 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.1e-128
Identity = 256/410 (62.44%), Postives = 290/410 (70.73%), Query Frame = 1 

Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTN----EDLPGDKEEAES-MNRNPGIQRYLVAVE 60
           M+EN KH L  + +SS  RP KI KT +    E+   DK++ ES M++NP IQRYLVA+E
Sbjct: 1   MSENPKHSLSTTPESS--RPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIE 60

Query: 61  YIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSS 120
           YIGTRFSGSQQQPNCRTVVGVLEEAF KFIG                             
Sbjct: 61  YIGTRFSGSQQQPNCRTVVGVLEEAFLKFIG----------------------------- 120

Query: 121 GSSSPTSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNH 180
               P S   C     +  DAGVHALSNVCHVDVERISKRKPGEVLPPHEP VVRRAVNH
Sbjct: 121 ---QPVSI-FC----SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNH 180

Query: 181 FLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNI 240
           FLQ ++GD+TV+DVR VPND+HARYKAQERTYFYRL+SG E LS+F+K+R WHVPE L++
Sbjct: 181 FLQ-SEGDITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDL 240

Query: 241 GAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKE 300
            AMQEACKVLVGHHDFSSFRAAGCQA SP+RTLDEL V E   TPYFPS  E+KQ     
Sbjct: 241 YAMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSST 300

Query: 301 E--------------------CENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVR 360
           E                     ++EV  +   ++GFGIRRRH C+VVTARARSFLYHQVR
Sbjct: 301 EDSHACSREPEIDLPIDSFSNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVR 360

Query: 361 LMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLP 386
           L+VGVLK VGTG+LT  DVERIL AK V++ASPMAPA GLYLG VKYDLP
Sbjct: 361 LLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPAYGLYLGCVKYDLP 370

[Close]
BLAST of Cp4.1LG01g16420 vs. TrEMBL
Match: K7LVD0_SOYBN (tRNA pseudouridine synthase OS=Glycine max GN=GLYMA_12G167000 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.4e-123
Identity = 242/407 (59.46%), Postives = 283/407 (69.53%), Query Frame = 1 

Query: 1   MTENQKHR--LEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNP--GIQRYLVAVEY 60
           MT+N KH   LE S +S P +  KI   ++ D+    EE E M++NP  GIQRYLVA+EY
Sbjct: 1   MTQNLKHTVDLECSDNSRPSKISKIEYPSDSDID---EEEEGMSQNPRNGIQRYLVAIEY 60

Query: 61  IGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSG 120
           IGT FSGSQ+Q N RTVVG LEEAF KF+G                              
Sbjct: 61  IGTLFSGSQKQLNVRTVVGALEEAFSKFVG------------------------------ 120

Query: 121 SSSPTSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHF 180
              P S         +  DAGVHALSNVCHVD++RISKR+PGEVLPPHEP VV RAVNHF
Sbjct: 121 --QPVSVSC-----SSRTDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHF 180

Query: 181 LQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIG 240
           LQK+D D+ V+DVR VP+D+HAR+KAQERTYFYRL+SGPE LS+F+KDR WHVPE L++ 
Sbjct: 181 LQKHDSDLMVIDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLP 240

Query: 241 AMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQ---- 300
           AMQEAC+VLVG HDFSSFRAAGCQA SP+RTLDEL V EV+ +PYFPS M+R+Q      
Sbjct: 241 AMQEACRVLVGCHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSG 300

Query: 301 GKEECEN--------------EVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMV 360
               C N              + + + S + GFG RRRHRC VVTARARSFLYHQVRL+V
Sbjct: 301 DLRSCSNNTETDIPPISNPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLV 360

Query: 361 GVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLP 386
           GVLKA GTG+LT+ DVERIL AK V++ASPMAPACGLYLG VKYDLP
Sbjct: 361 GVLKAAGTGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYDLP 367

[Close]
BLAST of Cp4.1LG01g16420 vs. TrEMBL
Match: A0A0B2RE02_GLYSO (tRNA pseudouridine synthase OS=Glycine soja GN=glysoja_043033 PE=3 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.4e-123
Identity = 242/407 (59.46%), Postives = 283/407 (69.53%), Query Frame = 1 

Query: 1   MTENQKHR--LEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNP--GIQRYLVAVEY 60
           MT+N KH   LE S +S P +  KI   ++ D+    EE E M++NP  GIQRYLVA+EY
Sbjct: 1   MTQNLKHTVDLECSDNSRPSKISKIEYPSDSDID---EEEEGMSQNPRNGIQRYLVAIEY 60

Query: 61  IGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSG 120
           IGT FSGSQ+Q N RTVVG LEEAF KF+G                              
Sbjct: 61  IGTLFSGSQKQLNVRTVVGALEEAFSKFVG------------------------------ 120

Query: 121 SSSPTSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHF 180
              P S         +  DAGVHALSNVCHVD++RISKR+PGEVLPPHEP VV RAVNHF
Sbjct: 121 --QPVSVSC-----SSRTDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHF 180

Query: 181 LQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIG 240
           LQK+D D+ V+DVR VP+D+HAR+KAQERTYFYRL+SGPE LS+F+KDR WHVPE L++ 
Sbjct: 181 LQKHDSDLMVIDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLP 240

Query: 241 AMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQ---- 300
           AMQEAC+VLVG HDFSSFRAAGCQA SP+RTLDEL V EV+ +PYFPS M+R+Q      
Sbjct: 241 AMQEACRVLVGCHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSG 300

Query: 301 GKEECEN--------------EVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMV 360
               C N              + + + S + GFG RRRHRC VVTARARSFLYHQVRL+V
Sbjct: 301 DLRSCSNNTETDIPPISNPSIDKVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLV 360

Query: 361 GVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLP 386
           GVLKA GTG+LT+ DVERIL AK V++ASPMAPACGLYLG VKYDLP
Sbjct: 361 GVLKAAGTGNLTIPDVERILNAKTVTAASPMAPACGLYLGEVKYDLP 367

[Close]
BLAST of Cp4.1LG01g16420 vs. TAIR10
Match: AT1G09800.1 (AT1G09800.1 Pseudouridine synthase family protein)

HSP 1 Score: 367.9 bits (943), Expect = 8.0e-102
Identity = 185/268 (69.03%), Postives = 206/268 (76.87%), Query Frame = 1 

Query: 135 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKNDGDVTVVDVRSVPN 194
           DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVV+RAVNHFLQ+ DGDV V+DVR VP+
Sbjct: 105 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDVRCVPS 164

Query: 195 DYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFSSF 254
           +YHARYKAQERTYFYRL+SG + LS  +KDR WHVPE LN+  MQEAC+VLVG HDFSSF
Sbjct: 165 NYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLVGSHDFSSF 224

Query: 255 RAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERK------------QRQGKEECENEVL 314
           RAAGCQA SPMR+LDEL++ EV STPYFPS  ER               Q K E      
Sbjct: 225 RAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPKSETAGVTT 284

Query: 315 HSESYE-----VGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERI 374
           +    E       FG RRRHRC+VVTAR+R FLYHQVRL+VG LK VGTG+LTV DVERI
Sbjct: 285 NVGEVEGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERI 344

Query: 375 LEAKNVSSASPMAPACGLYLGHVKYDLP 386
           LEAK VS+A PMAPA GLYL  V+Y+ P
Sbjct: 345 LEAKTVSAAKPMAPASGLYLARVRYEFP 372

[Close]
BLAST of Cp4.1LG01g16420 vs. TAIR10
Match: AT3G06950.1 (AT3G06950.1 Pseudouridine synthase family protein)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-09
Identity = 42/148 (28.38%), Postives = 68/148 (45.95%), Query Frame = 1 

Query: 135 DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGV--VRRAVNHFLQKNDGDVTVVDVRSV 194
           DAGVHA   V H             V P +   +     A+N  L K   D+ V ++ + 
Sbjct: 94  DAGVHAWGQVAHF------------VTPFNYTSLDSFHAALNGLLPK---DIRVRELSAA 153

Query: 195 PNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQEACKVLVGHHDFS 254
             ++HAR+ A  + Y Y++ +    +  F +   +H    LN   M+EA  + VG HDFS
Sbjct: 154 VPEFHARFSASSKVYRYQIYNDT-FMDPFQRHWAYHCAYKLNASKMREAANLFVGKHDFS 213

Query: 255 SFRAAGCQ--ANSPMRTLDELDVCEVVS 279
           +F  A  +     P++T+   DV ++ S
Sbjct: 214 AFANATREDGVPDPLKTISRFDVIQMGS 225

[Close]
BLAST of Cp4.1LG01g16420 vs. NCBI nr
Match: gi|659090353|ref|XP_008445970.1| (PREDICTED: tRNA pseudouridine synthase-like 1 isoform X1 [Cucumis melo])

HSP 1 Score: 555.1 bits (1429), Expect = 1.0e-154
Identity = 291/388 (75.00%), Postives = 306/388 (78.87%), Query Frame = 1 

Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGKTT++   GD+EEAE+MN  PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSGSSSP 120
           FS                       G      C +       A   FI           P
Sbjct: 61  FS-----------------------GSQQQPNCRTVVGALEEAFQKFI---------GQP 120

Query: 121 TSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKN 180
            S   C     +  DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVV +AVNHFLQK+
Sbjct: 121 VSV-FC----SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKH 180

Query: 181 DGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQE 240
           +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE LSSF+KDR WHVPE LNIGAMQE
Sbjct: 181 EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQE 240

Query: 241 ACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENE 300
           ACKVLVGHHDFSSFRAAGCQANSP+RTLDEL+VCEV STPYFP+SMERKQRQGKEE ENE
Sbjct: 241 ACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQGKEESENE 300

Query: 301 VLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEA 360
             HSE+ EVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEA
Sbjct: 301 EPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEA 351

Query: 361 KNVSSASPMAPACGLYLGHVKYDLPPPP 389
           KNVSSA PMAPACGLYLGHVKYDLPP P
Sbjct: 361 KNVSSARPMAPACGLYLGHVKYDLPPAP 351

[Close]
BLAST of Cp4.1LG01g16420 vs. NCBI nr
Match: gi|659090355|ref|XP_008445972.1| (PREDICTED: tRNA pseudouridine synthase-like 1 isoform X2 [Cucumis melo])

HSP 1 Score: 549.3 bits (1414), Expect = 5.5e-153
Identity = 290/388 (74.74%), Postives = 305/388 (78.61%), Query Frame = 1 

Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGKTT++   GD+EEAE+MN  PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDQVFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSGSSSP 120
           FS                       G      C +       A   FI           P
Sbjct: 61  FS-----------------------GSQQQPNCRTVVGALEEAFQKFI---------GQP 120

Query: 121 TSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKN 180
            S   C     +  DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVV +AVNHFLQK+
Sbjct: 121 VSV-FC----SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKH 180

Query: 181 DGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQE 240
           +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE LSSF+KDR WHVPE LNIGAMQE
Sbjct: 181 EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQE 240

Query: 241 ACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENE 300
           ACKVLVGHHDFSSFRAAGCQANSP+RTLDEL+VCEV STPYFP+SMERKQRQGKEE ENE
Sbjct: 241 ACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQGKEESENE 300

Query: 301 VLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEA 360
             HSE+ EVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGD ERILEA
Sbjct: 301 EPHSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGD-ERILEA 350

Query: 361 KNVSSASPMAPACGLYLGHVKYDLPPPP 389
           KNVSSA PMAPACGLYLGHVKYDLPP P
Sbjct: 361 KNVSSARPMAPACGLYLGHVKYDLPPAP 350

[Close]
BLAST of Cp4.1LG01g16420 vs. NCBI nr
Match: gi|778704462|ref|XP_011655540.1| (PREDICTED: tRNA pseudouridine synthase-like 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 544.3 bits (1401), Expect = 1.8e-151
Identity = 288/388 (74.23%), Postives = 303/388 (78.09%), Query Frame = 1 

Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEEAESMNRNPGIQRYLVAVEYIGTR 60
           MTENQKH LE S DSS QRPLKIGKTT+E   GD+EEAE+MN  PGIQRYLVAVEYIGTR
Sbjct: 1   MTENQKHGLELSIDSSSQRPLKIGKTTDELFHGDEEEAETMNPKPGIQRYLVAVEYIGTR 60

Query: 61  FSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSGSSSP 120
           F                        G      C +       A   FI           P
Sbjct: 61  F-----------------------YGSQQQPNCRTVVGALEEAFQKFI---------GQP 120

Query: 121 TSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFLQKN 180
            S   C     +  DAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVV +AVNHFLQK+
Sbjct: 121 VSV-FC----SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVNHFLQKH 180

Query: 181 DGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGAMQE 240
           +GDVTVVDVRSVPND+HARYKAQERTYFYRLVSGPE LSSF+KDR WHVPE LNIGAMQE
Sbjct: 181 EGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLNIGAMQE 240

Query: 241 ACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEECENE 300
           ACKVLVGHHDFSSFRAAGCQANSP+RTLDEL+VCEV STPYFP+SMERKQRQGKEE E E
Sbjct: 241 ACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQGKEESEIE 300

Query: 301 VLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGTGDLTVGDVERILEA 360
           V  SE+ EVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVG+GDLTVGDV RILEA
Sbjct: 301 VPCSETCEVGFGIRRRHRCFVVTARARSFLYHQVRLMVGVLKAVGSGDLTVGDVGRILEA 351

Query: 361 KNVSSASPMAPACGLYLGHVKYDLPPPP 389
           KNVSSA PMAPACGLYLGHVKYDLPP P
Sbjct: 361 KNVSSARPMAPACGLYLGHVKYDLPPAP 351

[Close]
BLAST of Cp4.1LG01g16420 vs. NCBI nr
Match: gi|731411452|ref|XP_010657987.1| (PREDICTED: tRNA pseudouridine synthase-like 1 isoform X1 [Vitis vinifera])

HSP 1 Score: 489.2 bits (1258), Expect = 6.8e-135
Identity = 264/406 (65.02%), Postives = 302/406 (74.38%), Query Frame = 1 

Query: 2   TENQKHRLEFSSDSSPQRPLKIGKTTNEDLPGDKEE----AESMNRNPGIQRYLVAVEYI 61
           +++ KH L   S+S PQRP KI +T  +DL   +++    +++M +NP +QRYLVAVEYI
Sbjct: 15  SDSPKHLLNRRSES-PQRPSKIART--DDLSDGEQQDSVASKTMTQNPRVQRYLVAVEYI 74

Query: 62  GTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSSGS 121
           GTRFSGSQQQ NCRTV G L+EAF KFIGQ VS+FCSSRT    V +  F+L +      
Sbjct: 75  GTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRT----VVTMNFMLPH------ 134

Query: 122 SSPTSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNHFL 181
                          E DAGVHALSNVCHVDVERISKRKPGEVLPPHEP VVRRAVNHFL
Sbjct: 135 ---------------EKDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFL 194

Query: 182 QKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNIGA 241
           QKN+GDV V+DVR VP D+HARYKA+ERTYFYRL+SGPE LSSF+KDR WHVPE L++ A
Sbjct: 195 QKNEGDVMVIDVRCVPPDFHARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLA 254

Query: 242 MQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKEE- 301
           MQ+AC+VLVG HDFSSFRAAGCQA SP+RTLDEL V EV+ TPYFPS  ER Q    EE 
Sbjct: 255 MQKACRVLVGCHDFSSFRAAGCQAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEEN 314

Query: 302 ---CEN--EVLHSESYE------------VGFGIRRRHRCFVVTARARSFLYHQVRLMVG 361
              C N  EV  S S               GFG+RRRHRCF+VTARARSFLYHQVRL+VG
Sbjct: 315 PLACSNNAEVPDSPSTANHDRLDGFNGAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVG 374

Query: 362 VLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLP 386
           V+K VGTGDLTV DVERIL AK V++ASPMAPACGLYLG+V YDLP
Sbjct: 375 VIKCVGTGDLTVSDVERILNAKTVTAASPMAPACGLYLGNVNYDLP 392

[Close]
BLAST of Cp4.1LG01g16420 vs. NCBI nr
Match: gi|590681992|ref|XP_007041228.1| (Pseudouridine synthase family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 474.6 bits (1220), Expect = 1.7e-130
Identity = 257/410 (62.68%), Postives = 291/410 (70.98%), Query Frame = 1 

Query: 1   MTENQKHRLEFSSDSSPQRPLKIGKTTN----EDLPGDKEEAES-MNRNPGIQRYLVAVE 60
           M+EN KH L  + +SS  RP KI KT +    E+   DK++ ES M++NP IQRYLVA+E
Sbjct: 1   MSENPKHSLSTTPESS--RPSKIPKTQDHSDQEEEEEDKQQQESSMSKNPRIQRYLVAIE 60

Query: 61  YIGTRFSGSQQQPNCRTVVGVLEEAFRKFIGQSVSVFCSSRTCTCRVASTTFILLNLQSS 120
           YIGTRFSGSQQQPNCRTVVGVLEEAF KFIG                             
Sbjct: 61  YIGTRFSGSQQQPNCRTVVGVLEEAFLKFIG----------------------------- 120

Query: 121 GSSSPTSFDVCREGYGTELDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVRRAVNH 180
               P S   C     +  DAGVHALSNVCHVDVERISKRKPGEVLPPHEP VVRRAVNH
Sbjct: 121 ---QPVSI-FC----SSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNH 180

Query: 181 FLQKNDGDVTVVDVRSVPNDYHARYKAQERTYFYRLVSGPETLSSFDKDRVWHVPEILNI 240
           FLQK++GD+TV+DVR VPND+HARYKAQERTYFYRL+SG E LS+F+K+R WHVPE L++
Sbjct: 181 FLQKSEGDITVIDVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDL 240

Query: 241 GAMQEACKVLVGHHDFSSFRAAGCQANSPMRTLDELDVCEVVSTPYFPSSMERKQRQGKE 300
            AMQEACKVLVGHHDFSSFRAAGCQA SP+RTLDEL V E   TPYFPS  E+KQ     
Sbjct: 241 YAMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSST 300

Query: 301 E--------------------CENEVLHSESYEVGFGIRRRHRCFVVTARARSFLYHQVR 360
           E                     ++EV  +   ++GFGIRRRH C+VVTARARSFLYHQVR
Sbjct: 301 EDSHACSREPEIDLPIDSFSNSDDEVGSNGITDLGFGIRRRHHCYVVTARARSFLYHQVR 360

Query: 361 LMVGVLKAVGTGDLTVGDVERILEAKNVSSASPMAPACGLYLGHVKYDLP 386
           L+VGVLK VGTG+LT  DVERIL AK V++ASPMAPA GLYLG VKYDLP
Sbjct: 361 LLVGVLKCVGTGELTTSDVERILNAKTVTAASPMAPAYGLYLGCVKYDLP 371

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g16420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TRUA_ROSDO2.0e-3335.71tRNA pseudouridine synthase A OS=Roseobacter denitrificans (strain ATCC 33942 / ... [more]
TRUA_BARHE1.3e-3236.00tRNA pseudouridine synthase A OS=Bartonella henselae (strain ATCC 49882 / DSM 28... [more]
TRUA_BARBK3.5e-3034.00tRNA pseudouridine synthase A OS=Bartonella bacilliformis (strain ATCC 35685 / K... [more]
TRUA_PARDP7.7e-3035.71tRNA pseudouridine synthase A OS=Paracoccus denitrificans (strain Pd 1222) GN=tr... [more]
TRUA_RUEST1.0e-2934.26tRNA pseudouridine synthase A OS=Ruegeria sp. (strain TM1040) GN=truA PE=3 SV=1[more]
BLAST of Cp4.1LG01g16420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRX0_CUCSA1.2e-15174.23tRNA pseudouridine synthase OS=Cucumis sativus GN=Csa_5G586020 PE=3 SV=1[more]
A0A061DW68_THECC1.2e-13062.68tRNA pseudouridine synthase OS=Theobroma cacao GN=TCM_006169 PE=3 SV=1[more]
A0A061DY96_THECC1.1e-12862.44tRNA pseudouridine synthase OS=Theobroma cacao GN=TCM_006169 PE=3 SV=1[more]
K7LVD0_SOYBN2.4e-12359.46tRNA pseudouridine synthase OS=Glycine max GN=GLYMA_12G167000 PE=3 SV=1[more]
A0A0B2RE02_GLYSO2.4e-12359.46tRNA pseudouridine synthase OS=Glycine soja GN=glysoja_043033 PE=3 SV=1[more]
BLAST of Cp4.1LG01g16420 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09800.18.0e-10269.03 Pseudouridine synthase family protein[more]
AT3G06950.12.1e-0928.38 Pseudouridine synthase family protein[more]
BLAST of Cp4.1LG01g16420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090353|ref|XP_008445970.1|1.0e-15475.00PREDICTED: tRNA pseudouridine synthase-like 1 isoform X1 [Cucumis melo][more]
gi|659090355|ref|XP_008445972.1|5.5e-15374.74PREDICTED: tRNA pseudouridine synthase-like 1 isoform X2 [Cucumis melo][more]
gi|778704462|ref|XP_011655540.1|1.8e-15174.23PREDICTED: tRNA pseudouridine synthase-like 1 isoform X1 [Cucumis sativus][more]
gi|731411452|ref|XP_010657987.1|6.8e-13565.02PREDICTED: tRNA pseudouridine synthase-like 1 isoform X1 [Vitis vinifera][more]
gi|590681992|ref|XP_007041228.1|1.7e-13062.68Pseudouridine synthase family protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR020094Pseudouridine synthase I, TruA, N-terminal
IPR001406PsdUridine_synth_TruA
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0008033 tRNA processing
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g16420.1Cp4.1LG01g16420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001406Pseudouridine synthase I, TruAHAMAPMF_00171TruAcoord: 48..382
score: 27
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 135..286
score: 1.7E-195coord: 317..383
score: 1.7E-195coord: 3..97
score: 1.7E
IPR020094Pseudouridine synthase I, TruA, N-terminalGENE3DG3DSA:3.30.70.580coord: 137..202
score: 8.7E-22coord: 48..99
score: 8.7
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3DG3DSA:3.30.70.660coord: 316..381
score: 4.5E-48coord: 204..275
score: 4.5
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 241..383
score: 3.5
IPR020103Pseudouridine synthase, catalytic domainunknownSSF55120Pseudouridine synthasecoord: 47..97
score: 7.34E-11coord: 135..278
score: 1.73E-49coord: 319..383
score: 1.73
NoneNo IPR availablePANTHERPTHR11142:SF1TRNA PSEUDOURIDINE SYNTHASEcoord: 3..97
score: 1.7E-195coord: 317..383
score: 1.7E-195coord: 135..286
score: 1.7E