Cp4.1LG01g15640 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g15640
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPhosphoribosyl pyrophosphate synthase 3 isoform 4
LocationCp4.1LG01 : 9300513 .. 9302962 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCTGAAGTTCTTTGCGTGCGAGATCAAGAACATCGAGAATTCTTTTCAGTGGACTGTTGAAAGCGTTCCTGGGACTGATTCTTTCTGTTCAATTCAAAAATCTGCTTCTACTTCGATCTCGATACCGACGACTACTGCCTCTCTAGAACTGACGCCTAAAAGCGACGCCAAGAAGATCTGCCTCTTGTTCTGCTAGGCGAGACGAAGATTCTTCGCAGAAAATTGCTGCTGAGTCTGATGGAATTGAGCCACGTGATGGCTTATGGAGGTTAGTTCAATTATGTAGCTATATGGAGAAGAAATCTGTAGGAATATGCTTTCAATTTATGATACAGAATTTTTTAATATGCTTTCAATTTATGGTTTCCATTTGAGACTTCAAAATGTCCCCGCAGAAAGAACGATTAAGATTGTATTGCTGCGTAGCTCAGCCCGGTGAAGTTATTTGTGTTCCTGATCGTAATGTCGAATTGTTGAGATTTTGAAAGTTCTCCAATGTTTTTAAGTTTATAGCATTTTTCACTGCGAAACAACATTGCGTATTCTGCCTTTTTAATTTAAGCATGATAAACATAAGCTGTTCGAGTTTCACAGAAGTTTATTCAAAATCAAAAGTCCTTTGGATTAATGCTTGCACAGTTCTTATATTAGGAAGTTTGAAGATGGATTACGAACATAATTATGTCCAATGCTAAAGGAATTCGTGAACAACATGTTGCCTTTCTGGCATCCTTCAAGTTCCCCTGTGTGAACTTTGAGCAACTCTCCCTTATTTATGCACTGCTGAAATTGTTCGTCTCTTCATTGACGCCTGTTCTCTCCATCTTTCCAACTGGAAATTTTGACTAAGCTTTTACTATTGCTCGGATCTCGATTATATATATGAATTTGGAGAGGAGGGCCGACTAACTGTGTACCTTTTGACATTCATGATGCAGATTCATTAACAAGCAGAACTTTACTTTTTAGAAGATAACTTGCTCTGCCTATTAGAATCCCTCACTTTTTTGAGTTTTTCCTCCTCTTCAGTGGCTGTTATTATTATTATTATTTTTTTTTTTTGTAGCAGAAGCTCTACTTGGGTGACAATACTTTACCATCCTTTGAAGTGGAATTCCTGCTAAAAAATAGTGTGCAACAGTTGCCAGATTCTGACCATGTAAGCTCTCGTNATCCCTCACTTTTTTGAGTTTTTCCTCCTCTTCAGTGGCTGTTATTTTTTTTGTAGCAGAAGCTTTACTTGGGTGACAATACTTTACCATCCTTTGAAGTGGAATTCCTGCTAAAAAATAGTGTGCAACAGTTGCCAGATTCTGACCATGTAAGCTCTCGTGTTTATGAACACGGCACGTGATATAACTGTGGGAAGGGAAAGCCCAAAAGAGACAACATCTGTTAGCGGTAGATTTTGACTGTTATAAATTATATCAGAACCAAACATGGAGCGATGTGCTAGCAAGGAGGTTGAGCCCCAAAGGGATAGATATGAGGCGGTGTGCCATCAAGGACGATAGGCTCCGAAGAGAGGTGGATTGAGGATTTTACATTGATTGGAAAAAAGAACGAGTGTCAGCGAGGACGCTGGCCCCAAAGAGAGTGGATTGTGAGACCCNGTGATGTAACTGTGGGAAGGGAAAGCCCGAAAGAGACAATATCTGTTAGCGGTAGATTTCGACGATTATAAATGATATTAGAACTAAATATGGAGCGATGTGCTAGCAGGAGGTTGAGCCCCAAAGGGATAGATATGAGGCGGTGTGCCATCAAGGACGATAGGCTCCGAAGAGAGGTGGATTGAGGATTTTACATTGATTGGAAAAAAGAACGAGTGTCAGCGAGGACGCTGGCCCCAAAGAGAGTGGATTGTGAGACCCGACGCATTTCAAAAATTTTAAGGAGAAGTTCGAGGAAAAAAGTTCAAAGAAGACAATATTTGCTAGTGGTAAGCTTCACCGGTTACCATAGCTAGCTTCAATATGCACTGCTAAAGTTGTTTTTGAATATTTCTCTCGAAANGAATTTTACATTGATTGGAGAAAAGAACGAGTGCCAGCGAGGACGCTGGCCCCAAAGAGAGTGGATTGTGAGACCCGACGCATTTCAAAAACCTTAAGGAGAAGTCCGAGGAAAAAAGTTCAAAGAAGACAATATTTGCTAGCGGTAAGCTTAAGCTGATTTTTAATATGCACTGCTAAAGTTGTTTTTGAATATTTCTCTCGAAATTGCATTGTGAGCTAAGGTTAATCTAGACTTTTGTAGTGCAATTGTGGAACATATTTTAGTTTGTAATCTCTCTCTGACGTGACAGAATTTGCTGCTTTCNGGCTTTTGTAGTGCAATTGTCGAACATATTTAAGTTTGTAATCTCTCTCTGACGTGACAGAATTTGCTGCTTTCCCGATAGCAATGGCTTTTCCGGACGATGGAGTATGGCAAGGACTTCATAAA

mRNA sequence

CTCCTGAAGTTCTTTGCGTGCGAGATCAAGAACATCGAGAATTCTTTTCAGTGGACTGTTGAAAGCGTTCCTGGGACTGATTCTTTCTGTTCAATTCAAAAATCTGCTTCTACTTCGATCTCGATACCGACGACTACTGCCTCTCTAGAACTGACGCCTAAAAGCGACGCCAAGAAGATCTGCCTCTTGCGAGACGAAGATTCTTCGCAGAAAATTGCTGCTGAGTCTGATGGAATTGAGCCACGTGATGGCTTATGGAGATGGATTACGAACATAATTATGTCCAATGCTAAAGGAATTCGTGAACAACATGTTGCCTTTCTGGCATCCTTCAAGTTCCCCTGTGTGAACTTTGAGCAACTCTCCCTTATTTATGCACTGCTGAAATTGTTCGTCTCTTCATTGACGCCTCAGAAGCTCTACTTGGGTGACAATACTTTACCATCCTTTGAAGTGGAATTCCTGCTAAAAAATAGTGTGCAACAGTTGCCAGATTCTGACCATAAGCTTTACTTGGGTGACAATACTTTACCATCCTTTGAAGTGGAATTCCTGCTAAAAAATAAATTTGCTGCTTTCCCGATAGCAATGGCTTTTCCGGACGATGGAGTATGGCAAGGACTTCATAAA

Coding sequence (CDS)

CTCCTGAAGTTCTTTGCGTGCGAGATCAAGAACATCGAGAATTCTTTTCAGTGGACTGTTGAAAGCGTTCCTGGGACTGATTCTTTCTGTTCAATTCAAAAATCTGCTTCTACTTCGATCTCGATACCGACGACTACTGCCTCTCTAGAACTGACGCCTAAAAGCGACGCCAAGAAGATCTGCCTCTTGCGAGACGAAGATTCTTCGCAGAAAATTGCTGCTGAGTCTGATGGAATTGAGCCACGTGATGGCTTATGGAGATGGATTACGAACATAATTATGTCCAATGCTAAAGGAATTCGTGAACAACATGTTGCCTTTCTGGCATCCTTCAAGTTCCCCTGTGTGAACTTTGAGCAACTCTCCCTTATTTATGCACTGCTGAAATTGTTCGTCTCTTCATTGACGCCTCAGAAGCTCTACTTGGGTGACAATACTTTACCATCCTTTGAAGTGGAATTCCTGCTAAAAAATAGTGTGCAACAGTTGCCAGATTCTGACCATAAGCTTTACTTGGGTGACAATACTTTACCATCCTTTGAAGTGGAATTCCTGCTAAAAAATAAATTTGCTGCTTTCCCGATAGCAATGGCTTTTCCGGACGATGGAGTATGGCAAGGACTTCATAAA

Protein sequence

LLKFFACEIKNIENSFQWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLLRDEDSSQKIAAESDGIEPRDGLWRWITNIIMSNAKGIREQHVAFLASFKFPCVNFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVEFLLKNSVQQLPDSDHKLYLGDNTLPSFEVEFLLKNKFAAFPIAMAFPDDGVWQGLHK
Homology
[Close]
BLAST of Cp4.1LG01g15640 vs. Swiss-Prot
Match: KPRS3_ARATH (Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Arabidopsis thaliana GN=PRS3 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-24
Identity = 82/238 (34.45%), Postives = 120/238 (50.42%), Query Frame = 1 

Query: 7   CEIKNIEN-SFQWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLLRD 66
           C ++++EN S   +++ +   D    I  ++S+ I++   T+    +    +K++CL   
Sbjct: 50  CGVRSLENHSGHRSLDFLSNGDPISLINPNSSSPITMAAATSE---SGSKSSKRVCLFHS 109

Query: 67  E---DSSQKIAAESDGIEPRDGLWR----WITNIIMSNAKGIREQHVAFLASFKFPCVNF 126
           +   D +++I A+SD IE R   W+       N+ + NA+GIR QHVAFLASF  P V F
Sbjct: 110 DETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFLASFSSPAVIF 169

Query: 127 EQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS------ 186
           EQLS+IYAL KLFVSS T    +    T    E E      F L   +  +P S      
Sbjct: 170 EQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTS 229

Query: 187 ---------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                      + Y GD  LP FE    LLK++  + P    I++AFPDDG W+  HK
Sbjct: 230 LVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNISIAFPDDGAWKRFHK 284

[Close]
BLAST of Cp4.1LG01g15640 vs. Swiss-Prot
Match: KPRS3_SPIOL (Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea GN=PRS3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 74/187 (39.57%), Postives = 95/187 (50.80%), Query Frame = 1 

Query: 57  AKKICLLRDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLA 116
           +KK+CL    ++   +++IAA+SD I+ R   WR       N+ +SNA+GIR +HVAFLA
Sbjct: 93  SKKVCLFYCPETKALAERIAAQSDAIQLRSISWRTFEDGFPNLFISNAQGIRGKHVAFLA 152

Query: 117 SFKFPCVNFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQL 176
           SF  P V FEQLS+IYAL KLFV+S      +    T    E E      F L   +  +
Sbjct: 153 SFSSPGVIFEQLSVIYALPKLFVASFKLVLPFFPTGTSERMEDEGDVATAFTLARILSNI 212

Query: 177 PDS---------------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDG 211
           P S                 + Y GDN LP FE    LLK K    P    I +AFPDDG
Sbjct: 213 PISREGPTSLVTFDIHALQERFYFGDNILPCFESGIPLLKKKLQQLPDSDNITIAFPDDG 272

[Close]
BLAST of Cp4.1LG01g15640 vs. Swiss-Prot
Match: KPRS3_ORYSJ (Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0723600 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-19
Identity = 66/172 (38.37%), Postives = 85/172 (49.42%), Query Frame = 1 

Query: 69  SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCVNFEQLSLI 128
           ++++ A +D IE R   WR       N+ +SNA  IR QHVAFLASF  P V FEQLS+I
Sbjct: 111 AEQVVARNDDIELRSISWRTFADGFPNLFISNAHTIRGQHVAFLASFSSPSVIFEQLSII 170

Query: 129 YALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS------------ 188
           YAL KLF+SS T    +    T    E E      F L   +  +P S            
Sbjct: 171 YALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNIPISRGGPSSLVIFDI 230

Query: 189 ---DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                + Y GD+ LP FE    LLK++    P    I +AFPDDG W+  +K
Sbjct: 231 HALQERFYFGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDDGAWKRFYK 282

[Close]
BLAST of Cp4.1LG01g15640 vs. Swiss-Prot
Match: KPRS4_SPIOL (Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.6e-18
Identity = 66/190 (34.74%), Postives = 93/190 (48.95%), Query Frame = 1 

Query: 54  KSDAKKICL---LRDEDSSQKIAAESDGIEPRDGLWR----WITNIIMSNAKGIREQHVA 113
           K + K++ L   +  E+ ++K+AA+S  I  +   WR       N+ ++NA+ IR QHVA
Sbjct: 3   KPNTKQVLLFYCVEAEELARKVAAQSPLITLQSINWRSFDDGFPNLFINNAQDIRGQHVA 62

Query: 114 FLASFKFPCVNFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSV 173
           FLA+F  P V FEQLS+IYAL +LFV+S T    +    +    E E      F +   +
Sbjct: 63  FLAAFSSPAVIFEQLSVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIL 122

Query: 174 QQLPDS---------------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFP 211
             +P S                 + Y  DN LP FE    LLK +    P    I +AFP
Sbjct: 123 SNIPVSRGGPTSVVIYDIHALQERFYFSDNVLPLFETGIPLLKQRLDQLPDADKIVVAFP 182

[Close]
BLAST of Cp4.1LG01g15640 vs. Swiss-Prot
Match: KPRS4_ORYSJ (Ribose-phosphate pyrophosphokinase 4 OS=Oryza sativa subsp. japonica GN=Os02g0714600 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.7e-18
Identity = 63/175 (36.00%), Postives = 84/175 (48.00%), Query Frame = 1 

Query: 66  EDSSQKIAAESDGIEPRDGLWR----WITNIIMSNAKGIREQHVAFLASFKFPCVNFEQL 125
           E+ + K+AA SD I  +   WR       N+ ++NA  IR QHVAFLASF  P V FEQ+
Sbjct: 24  EELALKVAASSDTIHLQSINWRSFDDGFPNLFINNAHDIRGQHVAFLASFSSPSVIFEQI 83

Query: 126 SLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS--------- 185
           S+I+AL KLF++S T    +    +    E E      F L   +  +P S         
Sbjct: 84  SVIFALPKLFIASFTLVLPFFPTGSFERVEEEGDVATAFTLARILSMIPKSRGGPTSVVI 143

Query: 186 ------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                   + Y GD+ LP FE    LL  +    P    I +AFPDDG W+  HK
Sbjct: 144 YDIHALQERFYFGDDVLPCFETGIPLLLQRLRQLPDADNITIAFPDDGAWKRFHK 198

[Close]
BLAST of Cp4.1LG01g15640 vs. TrEMBL
Match: A0A0A0KQ59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598760 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-43
Identity = 121/243 (49.79%), Postives = 140/243 (57.61%), Query Frame = 1 

Query: 6   ACEIKNIENSFQWTVESVPGT-DSFCSIQKSASTSISIPTTTAS-----LELTPKSDAKK 65
           ACEIKN ENS+ WT+ESVPGT DSFCSIQ SASTS SIP  TAS     LELT K+DAKK
Sbjct: 45  ACEIKNFENSYHWTIESVPGTTDSFCSIQNSASTSTSIPMATASAAIAALELTSKNDAKK 104

Query: 66  ICLLRDEDS---SQKIAAESDGIEPRDGLWR----WITNIIMSNAKGIREQHVAFLASFK 125
           ICL    ++   ++KIA ESDGI+ R   WR       NI + NA+GIR QHVAFLASF 
Sbjct: 105 ICLFFCPETKALAEKIADESDGIDLRSISWRKFEDGFPNIFIPNAQGIRGQHVAFLASFS 164

Query: 126 FPCVNFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS 185
            P V FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S
Sbjct: 165 SPSVIFEQLSVIYALPKLFISSFTLVLPFFPTGTFERMEDEGDVATAFTLARILSNIPIS 224

Query: 186 ---------------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQ 210
                            + Y GDN LP FE    LLKN+    P    IA+AFPDDG W+
Sbjct: 225 RGGPTSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNIAIAFPDDGAWK 284

[Close]
BLAST of Cp4.1LG01g15640 vs. TrEMBL
Match: A0A061EE76_THECC (Phosphoribosyl pyrophosphate synthase 3 isoform 4 OS=Theobroma cacao GN=TCM_010478 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-28
Identity = 96/240 (40.00%), Postives = 123/240 (51.25%), Query Frame = 1 

Query: 5   FACEIKNIENSF-QWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLL 64
           F C+IK+ EN    W+VE + GT+    IQ S S+S+S+   +AS         KK+CL 
Sbjct: 40  FWCQIKSFENQPPNWSVEFLSGTEPIHLIQNSPSSSMSMAAASASDSAV--KTVKKVCLF 99

Query: 65  RDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCV 124
              ++   +++IAAESD IE R   WR       N+ + NA GIR QHVAFLASF  P V
Sbjct: 100 YCAETKALAERIAAESDAIEIRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASFSSPGV 159

Query: 125 NFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS---- 184
            FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S    
Sbjct: 160 IFEQLSVIYALPKLFISSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGP 219

Query: 185 -----------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                        + Y GDN LP FE    LLKN+    P    I++AFPDDG W+  HK
Sbjct: 220 TSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNISIAFPDDGAWKRFHK 277

[Close]
BLAST of Cp4.1LG01g15640 vs. TrEMBL
Match: A0A061E6F5_THECC (Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 5 OS=Theobroma cacao GN=TCM_010478 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-28
Identity = 96/240 (40.00%), Postives = 123/240 (51.25%), Query Frame = 1 

Query: 5   FACEIKNIENSF-QWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLL 64
           F C+IK+ EN    W+VE + GT+    IQ S S+S+S+   +AS         KK+CL 
Sbjct: 40  FWCQIKSFENQPPNWSVEFLSGTEPIHLIQNSPSSSMSMAAASASDSAV--KTVKKVCLF 99

Query: 65  RDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCV 124
              ++   +++IAAESD IE R   WR       N+ + NA GIR QHVAFLASF  P V
Sbjct: 100 YCAETKALAERIAAESDAIEIRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASFSSPGV 159

Query: 125 NFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS---- 184
            FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S    
Sbjct: 160 IFEQLSVIYALPKLFISSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGP 219

Query: 185 -----------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                        + Y GDN LP FE    LLKN+    P    I++AFPDDG W+  HK
Sbjct: 220 TSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNISIAFPDDGAWKRFHK 277

[Close]
BLAST of Cp4.1LG01g15640 vs. TrEMBL
Match: A0A061E891_THECC (Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 2 OS=Theobroma cacao GN=TCM_010478 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-28
Identity = 96/240 (40.00%), Postives = 123/240 (51.25%), Query Frame = 1 

Query: 5   FACEIKNIENSF-QWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLL 64
           F C+IK+ EN    W+VE + GT+    IQ S S+S+S+   +AS         KK+CL 
Sbjct: 40  FWCQIKSFENQPPNWSVEFLSGTEPIHLIQNSPSSSMSMAAASASDSAV--KTVKKVCLF 99

Query: 65  RDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCV 124
              ++   +++IAAESD IE R   WR       N+ + NA GIR QHVAFLASF  P V
Sbjct: 100 YCAETKALAERIAAESDAIEIRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASFSSPGV 159

Query: 125 NFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS---- 184
            FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S    
Sbjct: 160 IFEQLSVIYALPKLFISSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGP 219

Query: 185 -----------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                        + Y GDN LP FE    LLKN+    P    I++AFPDDG W+  HK
Sbjct: 220 TSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNISIAFPDDGAWKRFHK 277

[Close]
BLAST of Cp4.1LG01g15640 vs. TrEMBL
Match: A0A061E7H7_THECC (Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 3 OS=Theobroma cacao GN=TCM_010478 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-28
Identity = 96/240 (40.00%), Postives = 123/240 (51.25%), Query Frame = 1 

Query: 5   FACEIKNIENSF-QWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLL 64
           F C+IK+ EN    W+VE + GT+    IQ S S+S+S+   +AS         KK+CL 
Sbjct: 40  FWCQIKSFENQPPNWSVEFLSGTEPIHLIQNSPSSSMSMAAASASDSAV--KTVKKVCLF 99

Query: 65  RDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCV 124
              ++   +++IAAESD IE R   WR       N+ + NA GIR QHVAFLASF  P V
Sbjct: 100 YCAETKALAERIAAESDAIEIRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASFSSPGV 159

Query: 125 NFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS---- 184
            FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S    
Sbjct: 160 IFEQLSVIYALPKLFISSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGP 219

Query: 185 -----------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                        + Y GDN LP FE    LLKN+    P    I++AFPDDG W+  HK
Sbjct: 220 TSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNISIAFPDDGAWKRFHK 277

[Close]
BLAST of Cp4.1LG01g15640 vs. TAIR10
Match: AT1G10700.1 (AT1G10700.1 phosphoribosyl pyrophosphate (PRPP) synthase 3)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 82/238 (34.45%), Postives = 120/238 (50.42%), Query Frame = 1 

Query: 7   CEIKNIEN-SFQWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLLRD 66
           C ++++EN S   +++ +   D    I  ++S+ I++   T+    +    +K++CL   
Sbjct: 50  CGVRSLENHSGHRSLDFLSNGDPISLINPNSSSPITMAAATSE---SGSKSSKRVCLFHS 109

Query: 67  E---DSSQKIAAESDGIEPRDGLWR----WITNIIMSNAKGIREQHVAFLASFKFPCVNF 126
           +   D +++I A+SD IE R   W+       N+ + NA+GIR QHVAFLASF  P V F
Sbjct: 110 DETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFLASFSSPAVIF 169

Query: 127 EQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS------ 186
           EQLS+IYAL KLFVSS T    +    T    E E      F L   +  +P S      
Sbjct: 170 EQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGPTS 229

Query: 187 ---------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                      + Y GD  LP FE    LLK++  + P    I++AFPDDG W+  HK
Sbjct: 230 LVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNISIAFPDDGAWKRFHK 284

[Close]
BLAST of Cp4.1LG01g15640 vs. TAIR10
Match: AT2G42910.1 (AT2G42910.1 Phosphoribosyltransferase family protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 63/178 (35.39%), Postives = 83/178 (46.63%), Query Frame = 1 

Query: 63  LRDEDSSQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCVNF 122
           L  E+ ++ IAAESD I  +   WR       N+ ++NA  IR QHVAFLASF  P V F
Sbjct: 34  LECEELARNIAAESDHITLQSINWRSFADGFPNLFINNAHDIRGQHVAFLASFSSPAVIF 93

Query: 123 EQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS------ 182
           EQ+S+IY L +LFV+S T    +    +    E E      F +   V  +P S      
Sbjct: 94  EQISVIYLLPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARIVSNIPISRGGPTS 153

Query: 183 ---------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                      + Y  D  LP FE    LL  +    P    + +AFPDDG W+  HK
Sbjct: 154 VVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQLPETEKVIVAFPDDGAWKRFHK 211

[Close]
BLAST of Cp4.1LG01g15640 vs. NCBI nr
Match: gi|449434967|ref|XP_004135267.1| (PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43
Identity = 121/243 (49.79%), Postives = 140/243 (57.61%), Query Frame = 1 

Query: 6   ACEIKNIENSFQWTVESVPGT-DSFCSIQKSASTSISIPTTTAS-----LELTPKSDAKK 65
           ACEIKN ENS+ WT+ESVPGT DSFCSIQ SASTS SIP  TAS     LELT K+DAKK
Sbjct: 45  ACEIKNFENSYHWTIESVPGTTDSFCSIQNSASTSTSIPMATASAAIAALELTSKNDAKK 104

Query: 66  ICLLRDEDS---SQKIAAESDGIEPRDGLWR----WITNIIMSNAKGIREQHVAFLASFK 125
           ICL    ++   ++KIA ESDGI+ R   WR       NI + NA+GIR QHVAFLASF 
Sbjct: 105 ICLFFCPETKALAEKIADESDGIDLRSISWRKFEDGFPNIFIPNAQGIRGQHVAFLASFS 164

Query: 126 FPCVNFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS 185
            P V FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S
Sbjct: 165 SPSVIFEQLSVIYALPKLFISSFTLVLPFFPTGTFERMEDEGDVATAFTLARILSNIPIS 224

Query: 186 ---------------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQ 210
                            + Y GDN LP FE    LLKN+    P    IA+AFPDDG W+
Sbjct: 225 RGGPTSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNIAIAFPDDGAWK 284

[Close]
BLAST of Cp4.1LG01g15640 vs. NCBI nr
Match: gi|659090733|ref|XP_008446171.1| (PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 2.5e-43
Identity = 120/244 (49.18%), Postives = 139/244 (56.97%), Query Frame = 1 

Query: 6   ACEIKNIENSFQWTVESVPGT-DSFCSIQKSASTSISIPTTTAS-----LELTPKSDAKK 65
           ACEIKN EN++QWT+ESVPGT DSFCSIQ SAS S S+P   AS     LELT K+DAKK
Sbjct: 45  ACEIKNFENTYQWTIESVPGTTDSFCSIQNSASISTSVPMAAASAAVAALELTSKTDAKK 104

Query: 66  ICLL---RDEDSSQKIAAESDGIEPRDGLWR----WITNIIMSNAKGIREQHVAFLASFK 125
           ICL      +  ++KIA ESDGI+ R   WR       NI + NA+GIR QHVAFLASF 
Sbjct: 105 ICLFFCPETKTLAEKIADESDGIDLRSISWRKFEDGFPNIFIPNAQGIRGQHVAFLASFS 164

Query: 126 FPCVNFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS 185
            P V FEQLS+IYAL KLFVSS T    +    T    E E      F L   +  +P S
Sbjct: 165 SPSVIFEQLSVIYALPKLFVSSFTLVLPFFPTGTFERMEDEGDVATAFTLARILSHIPIS 224

Query: 186 ---------------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQ 211
                            + Y GDN LP FE    LLKN+    P    IA+AFPDDG W+
Sbjct: 225 RGGPTSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNIAIAFPDDGAWK 284

[Close]
BLAST of Cp4.1LG01g15640 vs. NCBI nr
Match: gi|590694969|ref|XP_007044760.1| (Phosphoribosyl pyrophosphate synthase 3 isoform 7 [Theobroma cacao])

HSP 1 Score: 133.3 bits (334), Expect = 5.1e-28
Identity = 96/240 (40.00%), Postives = 123/240 (51.25%), Query Frame = 1 

Query: 5   FACEIKNIENSF-QWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLL 64
           F C+IK+ EN    W+VE + GT+    IQ S S+S+S+   +AS         KK+CL 
Sbjct: 40  FWCQIKSFENQPPNWSVEFLSGTEPIHLIQNSPSSSMSMAAASASDSAV--KTVKKVCLF 99

Query: 65  RDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCV 124
              ++   +++IAAESD IE R   WR       N+ + NA GIR QHVAFLASF  P V
Sbjct: 100 YCAETKALAERIAAESDAIEIRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASFSSPGV 159

Query: 125 NFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS---- 184
            FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S    
Sbjct: 160 IFEQLSVIYALPKLFISSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGP 219

Query: 185 -----------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                        + Y GDN LP FE    LLKN+    P    I++AFPDDG W+  HK
Sbjct: 220 TSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNISIAFPDDGAWKRFHK 277

[Close]
BLAST of Cp4.1LG01g15640 vs. NCBI nr
Match: gi|590694961|ref|XP_007044758.1| (Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 5 [Theobroma cacao])

HSP 1 Score: 133.3 bits (334), Expect = 5.1e-28
Identity = 96/240 (40.00%), Postives = 123/240 (51.25%), Query Frame = 1 

Query: 5   FACEIKNIENSF-QWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLL 64
           F C+IK+ EN    W+VE + GT+    IQ S S+S+S+   +AS         KK+CL 
Sbjct: 40  FWCQIKSFENQPPNWSVEFLSGTEPIHLIQNSPSSSMSMAAASASDSAV--KTVKKVCLF 99

Query: 65  RDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCV 124
              ++   +++IAAESD IE R   WR       N+ + NA GIR QHVAFLASF  P V
Sbjct: 100 YCAETKALAERIAAESDAIEIRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASFSSPGV 159

Query: 125 NFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS---- 184
            FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S    
Sbjct: 160 IFEQLSVIYALPKLFISSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGP 219

Query: 185 -----------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                        + Y GDN LP FE    LLKN+    P    I++AFPDDG W+  HK
Sbjct: 220 TSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNISIAFPDDGAWKRFHK 277

[Close]
BLAST of Cp4.1LG01g15640 vs. NCBI nr
Match: gi|590694957|ref|XP_007044757.1| (Phosphoribosyl pyrophosphate synthase 3 isoform 4 [Theobroma cacao])

HSP 1 Score: 133.3 bits (334), Expect = 5.1e-28
Identity = 96/240 (40.00%), Postives = 123/240 (51.25%), Query Frame = 1 

Query: 5   FACEIKNIENSF-QWTVESVPGTDSFCSIQKSASTSISIPTTTASLELTPKSDAKKICLL 64
           F C+IK+ EN    W+VE + GT+    IQ S S+S+S+   +AS         KK+CL 
Sbjct: 40  FWCQIKSFENQPPNWSVEFLSGTEPIHLIQNSPSSSMSMAAASASDSAV--KTVKKVCLF 99

Query: 65  RDEDS---SQKIAAESDGIEPRDGLWRWIT----NIIMSNAKGIREQHVAFLASFKFPCV 124
              ++   +++IAAESD IE R   WR       N+ + NA GIR QHVAFLASF  P V
Sbjct: 100 YCAETKALAERIAAESDAIEIRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASFSSPGV 159

Query: 125 NFEQLSLIYALLKLFVSSLTPQKLYLGDNTLPSFEVE------FLLKNSVQQLPDS---- 184
            FEQLS+IYAL KLF+SS T    +    T    E E      F L   +  +P S    
Sbjct: 160 IFEQLSVIYALPKLFISSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTSRGGP 219

Query: 185 -----------DHKLYLGDNTLPSFEVEF-LLKNKFAAFP----IAMAFPDDGVWQGLHK 211
                        + Y GDN LP FE    LLKN+    P    I++AFPDDG W+  HK
Sbjct: 220 TSLVTFDIHALQERFYFGDNILPCFESGIPLLKNRLQQLPDSDNISIAFPDDGAWKRFHK 277

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g15640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KPRS3_ARATH2.6e-2434.45Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
KPRS3_SPIOL2.4e-2239.57Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea GN=PRS3... [more]
KPRS3_ORYSJ1.9e-1938.37Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Oryza sativa subsp. japon... [more]
KPRS4_SPIOL3.6e-1834.74Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1[more]
KPRS4_ORYSJ4.7e-1836.00Ribose-phosphate pyrophosphokinase 4 OS=Oryza sativa subsp. japonica GN=Os02g071... [more]
BLAST of Cp4.1LG01g15640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ59_CUCSA1.0e-4349.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598760 PE=4 SV=1[more]
A0A061EE76_THECC3.5e-2840.00Phosphoribosyl pyrophosphate synthase 3 isoform 4 OS=Theobroma cacao GN=TCM_0104... [more]
A0A061E6F5_THECC3.5e-2840.00Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 5 OS=Theobroma cacao GN=T... [more]
A0A061E891_THECC3.5e-2840.00Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 2 OS=Theobroma cacao GN=T... [more]
A0A061E7H7_THECC3.5e-2840.00Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 3 OS=Theobroma cacao GN=T... [more]
BLAST of Cp4.1LG01g15640 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10700.11.5e-2534.45 phosphoribosyl pyrophosphate (PRPP) synthase 3[more]
AT2G42910.11.7e-1835.39 Phosphoribosyltransferase family protein[more]
BLAST of Cp4.1LG01g15640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434967|ref|XP_004135267.1|1.5e-4349.79PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial [Cucumis sativus][more]
gi|659090733|ref|XP_008446171.1|2.5e-4349.18PREDICTED: ribose-phosphate pyrophosphokinase 4-like [Cucumis melo][more]
gi|590694969|ref|XP_007044760.1|5.1e-2840.00Phosphoribosyl pyrophosphate synthase 3 isoform 7 [Theobroma cacao][more]
gi|590694961|ref|XP_007044758.1|5.1e-2840.00Phosphoribosyl pyrophosphate (PRPP) synthase 3 isoform 5 [Theobroma cacao][more]
gi|590694957|ref|XP_007044757.1|5.1e-2840.00Phosphoribosyl pyrophosphate synthase 3 isoform 4 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g15640.1Cp4.1LG01g15640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10210RIBOSE-PHOSPHATE PYROPHOSPHOKINASEcoord: 49..136
score: 2.9
NoneNo IPR availablePANTHERPTHR10210:SF45RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTICcoord: 49..136
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g15640Silver-seed gourdcarcpeB0344
Cp4.1LG01g15640Silver-seed gourdcarcpeB0710
Cp4.1LG01g15640Silver-seed gourdcarcpeB0888
Cp4.1LG01g15640Silver-seed gourdcarcpeB1019
Cp4.1LG01g15640Cucumber (Chinese Long) v3cpecucB0478
Cp4.1LG01g15640Cucumber (Chinese Long) v3cpecucB0544
Cp4.1LG01g15640Wax gourdcpewgoB0529
Cp4.1LG01g15640Wax gourdcpewgoB0555
Cp4.1LG01g15640Cucurbita pepo (Zucchini)cpecpeB033
Cp4.1LG01g15640Cucurbita pepo (Zucchini)cpecpeB116
Cp4.1LG01g15640Cucurbita pepo (Zucchini)cpecpeB406
Cp4.1LG01g15640Cucumber (Gy14) v1cgycpeB0751
Cp4.1LG01g15640Cucumber (Gy14) v1cgycpeB1041
Cp4.1LG01g15640Cucurbita maxima (Rimu)cmacpeB186
Cp4.1LG01g15640Cucurbita maxima (Rimu)cmacpeB431
Cp4.1LG01g15640Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g15640Cucurbita maxima (Rimu)cmacpeB776
Cp4.1LG01g15640Cucurbita moschata (Rifu)cmocpeB162
Cp4.1LG01g15640Cucurbita moschata (Rifu)cmocpeB396
Cp4.1LG01g15640Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g15640Cucurbita moschata (Rifu)cmocpeB731
Cp4.1LG01g15640Wild cucumber (PI 183967)cpecpiB383
Cp4.1LG01g15640Wild cucumber (PI 183967)cpecpiB440
Cp4.1LG01g15640Cucumber (Chinese Long) v2cpecuB384
Cp4.1LG01g15640Cucumber (Chinese Long) v2cpecuB440
Cp4.1LG01g15640Bottle gourd (USVL1VR-Ls)cpelsiB353
Cp4.1LG01g15640Bottle gourd (USVL1VR-Ls)cpelsiB383
Cp4.1LG01g15640Watermelon (Charleston Gray)cpewcgB389
Cp4.1LG01g15640Watermelon (Charleston Gray)cpewcgB418
Cp4.1LG01g15640Watermelon (97103) v1cpewmB397
Cp4.1LG01g15640Watermelon (97103) v1cpewmB428
Cp4.1LG01g15640Melon (DHL92) v3.5.1cpemeB364
Cp4.1LG01g15640Melon (DHL92) v3.5.1cpemeB402
Cp4.1LG01g15640Cucumber (Gy14) v2cgybcpeB210
Cp4.1LG01g15640Cucumber (Gy14) v2cgybcpeB649
Cp4.1LG01g15640Melon (DHL92) v3.6.1cpemedB424
Cp4.1LG01g15640Melon (DHL92) v3.6.1cpemedB467