Cp4.1LG01g14940 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g14940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
Location	Cp4.1LG01 : 7204259 .. 7212237 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGATGACGACTTCTCTGACTACAAGCTCTGCGGTTTCTTGTGTGTGGTTCTTGCCGTTCCTTCGCCGTTGTCCGAACTGGCGGATGCTCTACGTCCAGGTACGCGTTGTTATGTCTCTGTTGAGAGTTCTGATGTTTGTTTTACTTCCGAATATGGCGTCGTGCTTACTCCGATTGAAGCAAACCCCAAACCGCTCTCCAAGGCCGGTGTTTCGCCTCAAGATTCTGAGCAATGTAGGGGGACGGTAGGTGGAGAGGGAACTAGTACGGTGGAGAATGGTGATTTAACTTTGAAGCGGAAGATGTCTGCGAGAGGACGTAGGACCTCGGGGAAAAAGAGGACGAATAGGATGGGGCTGGTTCATGGCAGCATGAGCGTTGTGCATCAAATTCACGCTCTGGTAGTGCACAAGTGCTTGAAGATTGACGCGCAGGTGATTTTTGTTGACATTGGCGTTGATGAGGAGGCCCGAGCTGTGTTGTTGGTTGATGTTCATCTTCCCGTTGAATTGTGGTCCGGTTGGCAGTTTCCTAGATCCAAGACGGTTGCTGGTGCGCTATTTAGGCATTTGAGGTGATGGATTACTTTAAGTTCATTCGATTATTTTTTTTTCGGTTGAGTTTGAATTTGAGTTCGTAGTTTTCAGTGACTTTTCATGAACATATTTCATTAGTCAATGTTGAAGAGGAACTCGAGTGGCTAGTGGTTATGTTTCTTTTTTGAATAATCAGATTGACGCTCAAAAAGGCTATCGTTGGTCCAACCAAAGAACTTGAGTATGTTAAGACTATCTATCCACATTATATGACATCATTTATCTTCCAATTAAGGAACCTCTATACATTATGTAGCTTCTTGAAAATGTTTAGAGAACTGATATAAGTTGTAACTCCCTCCATAAAGCCATATAATCCCTTCATAAAATGTATAGACAGCTCATGTTGGTGAAAAAAGTAGAGTCTTCATTCCCTTCATCTAATCTATCTAATCCTGGATTCTTGCATCGTTATTGGTTATCTTGAGCATTCATCTCCATCGACTCCAGCTTCACAAATCTTGTTTGCTCAAAAACAATTTTCTTCTTCGAATTTGTGCATATGGACATTAATCTTCTTCATCAATGGCTCCTTTCTATGGACACCCGAAGTAATTCATTTCACTCTCTGATAATATTCTTAGTAGCCTTTACCTGATTGAGAAATCAGACCTTTTTAGGCTAGAATCCTTCCCAGAGGTACTTAAAAGGAGTGGTACTGTTGTGAAAAATTCTTAAATTTAAAGAAGATAGGACCTATAGATATCGCCCTAGTGATTGCATTCTTAAAAGGGAAGGAATGAAAGGATTTGGAGACAAACTTGAAAATTCTTGATGTTTTGGTCCCTTATTCGTTTATTAATTTCTAATAATCGTTTTGGCAACTTAGACCAAGCAGTTAAAAAAAAAATATATTTTTTTTTTTTAGTTTTTGCAAGAATCAAGATTGGTATAAGTTGTAATCTATAGTCTATTCATTCTTATTTGTTTATTTTTTTTCTTCTGTTAAGTAGGATCTTCGACTCCTACTTCTATTAGCTTTTTGTAATGGATTTTTGTTTCATGCAAATGTTGTGAGTTTATTATTGTTTCAGTTATAAATGGCCTTTTGTTTTAGATGAAATGTTTTAAGTTTATTATCCTATATACTTTCAGTTGTGAATGGCAAGAAAGAAGCTCTCTACTTGTTGGAAAAGATCATTCTCAAGTTGCAGATATGGTTAGGAAGAGCGTGTGGAATCCCGCAGAATGTCATGTCCACAATTGCAAATTGCACAATAGTCCTGGAGGTTCTTCAAATAGAAGGCTCTTTGAACTTCATGAAATATTTAGAAGCTTACCGAGTATTCTTAGGTCATGCAAACCTGAATATACGAGAATACAACCAGAGGATGATTATTCTCAATCAGGCATATGGGACATATCAGATGACGTTCTGATTAATATAATGAAAGCTCTTCGCCCTTTGGATCTTATTAGGGTTGCTTCAACTTGCCACCATCTGAGATCCTTATCTGCATCAATCATGCCATGCATGAAACTCAAATTGTATCCTCACCAGCAGGCAGCTGTTGAATGGATGTTACACCGTGAGCGGAATGCTGAAGTTTTCTACCATCCTTTATATGTACCTTTTTCAACAGAAGATGGTTTTTCGTTCCACATAAATACCGTTACTGGTGAAATAGTCACTCTGGGGACCCCAGCTATCACTGATTTTCGTGGGGGGCTTTTCTGTGATGAACCGGGCTTAGGAAAGACAATAACTGCACTGTCCCTTATCTTAAAGACTCAGGGAACATTAGCAGAACCACCACCTGGAGTACAAATTGTTTGGTGCACACATAATGGCAACCGTAAATGTGGTTACTACGAGGTTAGCAGTAATAGTAATACTAGCACCAACAATTTATTGGTGAAGGAAGCTGTGGGCTGTAGTTCTCTGAAAGGAATGGAGGACTTAACATATCATACACCTAAAAGGGCAAGGCTGACGACTTTGGATGACAGACATACAGTAACTAATGATTCATGTGCTGGCAATGAGATGATATCTCCATCATCTACAGACTATGCAAAAGCAGTTCAAATGGTTCGATGCACTAGGAGCTTGAGTAGTGTCAAGAGAAATCTTCTTCTCACGTATGAAGGAGCATCTAGCCTTTCCAGACACCTGAATACTGGTAAAAAGTCAACAAGAACACGGACAAGGAAGTTGGCTGCTGGGGCAAAGAGAGCTGGTGTGTCTAATGGATTCACAAACAACTATGAGGTGTCTGAGACAACCACTGCAGATAAATTCGAATATAAGGACACATGGGTGCAGTGTGATGCTTGTCACAAGTGGCGGAAGCTTTCAGAAACTTCTATAGCTGATGCTAGTACAGCTTGGTTTTGTAGTATGAATACTGATCCTTTTTACCAAAGTTGCAGTGTTCCAGAAGAATCTTATGACAAGTGCCGTCCAATTACTAATATTCCAGGATTCTACAGCAAAGACACTTCTGGAGGCGAGGAGAAAAATATTTCGTTCTTCACCAGTGTGCTCAAGGAAAACATGGCACTGATAAATTCTGGAACAAAGAGAGCCTTGACTTGGTTATCTAATCTAGCTCCTGAAAAAATTTCAGAAATGGAAACAACTGGTTTAAGAAGTCCTATACTAGCATCTTATGTGGTTCCTGGTAGTGATGTCTGTGGTTTTCATAAGATGTTCGAAGCATTTGGTTTAGTAAGAAAAATGGAAAAAGGCACTATCAGATGGTATTACCCGCATAATCTTCACAACTTGGCATTTGATGTTGCTGCTCTGAAAACTGCATTGACTGAGCCACTCGATTCAGTTCGGTTATATTTATCAAGAGCAACCCTGATTATTGTTCCATCAAATCTAGTTGATCACTGGAAGACTCAAATTCAAAAACATATCAGACCTGGTCAGTTACTGGTTTATGTATGGACTGATCATAGAAAACCATCTGCACATTGTCTAGCATGGGATTATGATGTTATCATTACCACATTTAGTCGGTTAAGTGCAGAATGGGGGCCACGGAAGAGAAGTATATTAATGCAAGTGCATTGGCATAGGGTCATTTTAGATGAAGGGCACACCCTTGGCTCTAGTCTTAACTTAACAAACAAGTTGCAAATGGCTGTTTCTTTGATATCTTCAAATCGCTGGATATTAACAGGAACTCCAACTCCTAGCACACCTAATAGTCAGCTTTCACATCTTCAACCATTACTTAGGTTTCTTCATGAAGAAGCCTATGGTCAGAATCATAAGTCATGGGAGGCTGGTATACTTAGACCTTTTGAGGCAGAAATGGAGGAAGGAAGGTTACTTTTGTTAGACTTACTTCGTAGGTGTATGATTAGTGCAAGAAAGACGGACTTACTATCCATCCCTCCTTGCATCAAGAAGGTAAAATACCTAAATTTTACAGAAGAGCATGCTCGAAGTTACAATGAACTTGTAGTTACAGTGCGGCGTAATATATTGATGGCTGACTGGAATGATCCTTCTCATATTGAAAGTTTATTGAATCCGAAGCAATGGAAATCTCGAAGCACAACAATCAAGAACATCAGACTATCTTGCTGCGTGGCTGGACATATTAAAGTCGCAGAAGCTGGTGAAGATATTCAGGAAACCATGGATATTCTTGTTGATGATGGTCTGGATCCTATGTCACAGGAGTATTCTTTTATAAAATATAATCTTCTTTATGGCGGGAACTGTGCTAGGTATTATTCCACTTTGATTCATGCCGACTCTTTCACAATGTTTTGTTTTTGTTTTATTAATGAAAGAATGCTTGTATAGGTGTGGGGAATGGTGTCGTTTACCTGTGATTGCACCCTGTAGGCATCTTCTTTGCCTTGATTGTGTTGCTTTGGATTGTGAAGGGTGTACCTTTCCTGGCTGTGGTAAATTATACGTGATGCAGACTCCTGAAACCATAGCACGGCCTGAAAATCCCAATCCAAAGTGGCCTGTTCCCAAAGACCTTATTGAGTTGCAACCATCATATAAGCAAGTAGGCTGACTACGAGTGATAGTTACTTGAAAATATGTGGTTTGAACTTTATCAATATATGGCCAACTGATCGTGGTGTGTGATATTTACAGGATAACTGGGATCCTGATTGGCAATCAACTTCTAGCAGTAAAGTTGCATATCTCATTCAGAGATTAAAAGCTTTAAGTGAAGCAAATGATGAAGCTGCTTTGTTCCCTCCCCCTTCATTGACTAAATCTGATGTACTACTGCAGGAAGTAGACCACTCAAGGAATATCACTTCAGATCATGAAATAGTCAGAGACAAAGTTCTTATTTTCTCTCAATTTCTTGAGCATATTCANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAGTCCAGGAATTTTGTACAATTATCTGAACTTAGCATTGTGTCTCCTTGCCCAGTTAACCATTGCCGGCATCAGATTTGCTGGGATGTATAGTCCAATGCATGCTAGCAATAAGGTGTGGCATTCAATTCTATCATGTTCATAACGCGTAGAGATACCTAGGTTTGATGCTGGTGTCGAGGTGTGCATTGATTCTGTTTCACCGGTGCAGATGAAATCATTGGCCACGTTTCAGCATGATGCAAGCTGCATGGTGCTTTTGATGGATGGAAGTGCTGCACTGGGTCTTGATTTGAGCTTTGTAACTTACGTATTTCTAATGGAGCCAATCTGGGACAAAAGGTAATACAAAAGCATTTTATGTTCAAGTCGTTTGATGGATGATTTAGACCTTCGTACAGGACTATATAATAAAAAATAAGTTGTTCTTCACCATCTCAAATACTCTTGCAGCAGATCTGATTTTTTATTTGAGAGAGAATCCTGACCATCCTTCTGTCTTTCATCTGAATGAAGTCTTATCACTTCAAGTATACAACCCATATATAGGGATACCAAGAACTTTCAAACTTGGTAGAGAGAGTAAATAGTGAAAGTGTCTCTCCAAGTAGTTTGAGCATGGATGAATCTGTTTTTGCTAAATGAGAAAGTGGTTAATGAGAAAAAATATTGGTCGAGTCCTGCAGATTTTCATTGAACGATAGGTCTTAAATTAGCTGATTGAATTTTCTCATTCGGTTAGTTATGCTGCGACCTGAGGATTTTTCACGACTCATCTACTGCAATTAGTTTGCACTGTGAAGAATCAGATTTACTAGGCATGTAGCTCTTGCCTTACTGTTGCTGATATATTGTAGTCCACCGTTTTTCTGCAATTAACAATTAGAAAGGTCTGGATTCACAACTCATCTACTGCAATTAGTTTGCTGATATATTTTAGACCATAAGAAAACAGTTAACCTTGCAAGTAGTAAAACATTTTCTCTGAATCCAGACCTTTCTGAAAGAAGTCTTTCCTAGCGATCTGAATTTGCTTTGCAAGAATGAAAAAGTTCAACGAGGGGGATGTTGCATGATGATGAATTGTCGCTTTATGTAGCCAATTATGTCTTTAACATAAGAGCTGATCTTGGCCTCGTTAATTTTGTGAGTGATTAATACACTTTTTCCTCATTTGGTTAATTTTGAAAAACAATCTTTCCTCTTTCCAAATAGTCTTGTATTAAGCTTCTAAAGCACTAGAGTGAATTACTACTTATTTCCTCCCTTATACACCTCTGTTATTAAACATCTTGAAATATTTGAAAAACAGGCTAATTCATTATTTATTTTCATCTTTCTTTGAATGTTATCTTGGTTTCCATCCCATACATTTTCAGATCGTCATGCATTTTGCACTTTTAATCCAAGTAATGGATCAATATTTCTATGCATTTGGCTCTGACTTCTCAAAAGATAAAGCATTAATAACTAATCCATCATGGCTGCGCAGTATTCTTTTTTAACTGCTTGACATAGGATTGTTTTCAGTTATAGTAATTCACTCAATATTTTACTCTTTTTTAGCATGGAGGAACAAGTGATTAGTCGTGCTCATCGGATGGGTGCTACTCGTCCTATTCATGTTGAAACCTTAGTAATGCATGAAACAATTGAAGAGCAAATGGTACAGTTTCTACAGGTATGCCATACGTTCTGAAATAGTAGTGGTAGTGATCTTGCCTTGGGTATTTACAGTCTTGTTATTACTTTTTCTTTTTTTTTTTCTTGTGTGTGTGCGTGCTACATGGGATGGGGAGATTCAAATCGGAGACCTTTTAGTTGAAAGTACACACTTTTTGCCAGTTGAGTTATGCTCAATTCGCTTTGAGTATTAACAATCTCATTATTATGTGCTCTAGTTATTGTAATTTTGCATCCTGTTTCTTGAGCTTGGGCTTTTGTAGGTGCGTCTTTTTTTTTTACTTTCATTTATCTTAATAAAAGCTGGTTTCTTTTTTTAAAAAAACAAAAACCTGTATGCTTGTATAATTATATTACAGCAATTTCTTCCGAAGAATTTACTGAAGTTGTCTTTGATTTCAAAGGTTCAGCTATCAGGATTTGAGGACCTCGGTTCCTCATTCTTGATAAAGCACACCTTTCTTATCTGTTATGTTTTGTTTCACACGCAAGAAACCTTCTATTAAAGTGGAAAACATGCACTTTTAAGCCTCTTTAATTGTATGAGGCACGACCCAAAGAACATCTTAAAGATAACGGCTTAAAATTAAAGAAATCCCTAAAAACCTTATACAAAGTTTCCCTTTCCGTTCTATTTTTAAGTGCTAAGATGCATCTGGATGAAGAGAGCCCGAACATTCTATTGGTCATACCTAGATACCCCAAATATCTTCTTCTACATATTGTGGAGAAGTCCAGAAAAGTAAAGAAAAAGCACCTGGTCCTTTTTTTCACAATTTTGGTATCAACAATACTAGTTCTGGAGGAGGCTGATCTAGGATTTTTCTATTGAATATGTTCAAGATATTAACCTCTCCAGTGGGGTTTAGCAAAAGATAACCCACATTATTCATTTGTCTTAAAGGCTAAATGTTCATATCTCCACCAACATTGTTGAAATAAAAAGAAACAAAGTTGATGAAGGAAGAATTTGGAAAGCCTGATTATGTAGACTAAACTCTCTTTTGCACATTCTATGATTGATTTTTTTCTTTTCCTTAAATGGTTGATTTTTCTGAAACGCTCCAGGTCATTCTTTTTAATGCTTTAAACCTCATTATTTACTCTTTTCTCAACATGCTTTGTTTCCCCCCTTTTAAATGAAGGATACTGATGAGTGCAAAAGATTGATGAAGGAAGAATTTAGCAAGCCTGATTATGAAGGACCACGTGCTCATCGTTCAATGCATGATTTTGCTGGGAGCAATTATCTTTCTCAGCTCAAGTTTGTGAGGACAAATCCTATGATGGAAAAGGCTGTAGAGAATATTTAA

mRNA sequence

ATGGACGATGACGACTTCTCTGACTACAAGCTCTGCGGTTTCTTGTGTGTGGTTCTTGCCGTTCCTTCGCCGTTGTCCGAACTGGCGGATGCTCTACGTCCAGGTACGCGTTGTTATGTCTCTGTTGAGAGTTCTGATGTTTGTTTTACTTCCGAATATGGCGTCGTGCTTACTCCGATTGAAGCAAACCCCAAACCGCTCTCCAAGGCCGGTGTTTCGCCTCAAGATTCTGAGCAATGTAGGGGGACGGTAGGTGGAGAGGGAACTAGTACGGTGGAGAATGGTGATTTAACTTTGAAGCGGAAGATGTCTGCGAGAGGACGTAGGACCTCGGGGAAAAAGAGGACGAATAGGATGGGGCTGGTTCATGGCAGCATGAGCGTTGTGCATCAAATTCACGCTCTGGTAGTGCACAAGTGCTTGAAGATTGACGCGCAGGTGATTTTTGTTGACATTGGCGTTGATGAGGAGGCCCGAGCTGTGTTGTTGGTTGATGTTCATCTTCCCGTTGAATTGTGGTCCGGTTGGCAGTTTCCTAGATCCAAGACGGTTGCTGGTGCGCTATTTAGGCATTTGAGATTGACGCTCAAAAAGGCTATCGTTGGTCCAACCAAAGAACTTGATTGTGAATGGCAAGAAAGAAGCTCTCTACTTGTTGGAAAAGATCATTCTCAAGTTGCAGATATGGTTAGGAAGAGCGTGTGGAATCCCGCAGAATGTCATGTCCACAATTGCAAATTGCACAATAGTCCTGGAGGTTCTTCAAATAGAAGGCTCTTTGAACTTCATGAAATATTTAGAAGCTTACCGAGTATTCTTAGGTCATGCAAACCTGAATATACGAGAATACAACCAGAGGATGATTATTCTCAATCAGGCATATGGGACATATCAGATGACGTTCTGATTAATATAATGAAAGCTCTTCGCCCTTTGGATCTTATTAGGGTTGCTTCAACTTGCCACCATCTGAGATCCTTATCTGCATCAATCATGCCATGCATGAAACTCAAATTGTATCCTCACCAGCAGGCAGCTGTTGAATGGATGTTACACCGTGAGCGGAATGCTGAAGTTTTCTACCATCCTTTATATGTACCTTTTTCAACAGAAGATGGTTTTTCGTTCCACATAAATACCGTTACTGGTGAAATAGTCACTCTGGGGACCCCAGCTATCACTGATTTTCGTGGGGGGCTTTTCTGTGATGAACCGGGCTTAGGAAAGACAATAACTGCACTGTCCCTTATCTTAAAGACTCAGGGAACATTAGCAGAACCACCACCTGGAGTACAAATTGTTTGGTGCACACATAATGGCAACCGTAAATGTGGTTACTACGAGGTTAGCAGTAATAGTAATACTAGCACCAACAATTTATTGGTGAAGGAAGCTGTGGGCTGTAGTTCTCTGAAAGGAATGGAGGACTTAACATATCATACACCTAAAAGGGCAAGGCTGACGACTTTGGATGACAGACATACAGTAACTAATGATTCATGTGCTGGCAATGAGATGATATCTCCATCATCTACAGACTATGCAAAAGCAGTTCAAATGGTTCGATGCACTAGGAGCTTGAGTAGTGTCAAGAGAAATCTTCTTCTCACGTATGAAGGAGCATCTAGCCTTTCCAGACACCTGAATACTGGTAAAAAGTCAACAAGAACACGGACAAGGAAGTTGGCTGCTGGGGCAAAGAGAGCTGGTGTGTCTAATGGATTCACAAACAACTATGAGGTGTCTGAGACAACCACTGCAGATAAATTCGAATATAAGGACACATGGGTGCAGTGTGATGCTTGTCACAAGTGGCGGAAGCTTTCAGAAACTTCTATAGCTGATGCTAGTACAGCTTGGTTTTGTAGTATGAATACTGATCCTTTTTACCAAAGTTGCAGTGTTCCAGAAGAATCTTATGACAAGTGCCGTCCAATTACTAATATTCCAGGATTCTACAGCAAAGACACTTCTGGAGGCGAGGAGAAAAATATTTCGTTCTTCACCAGTGTGCTCAAGGAAAACATGGCACTGATAAATTCTGGAACAAAGAGAGCCTTGACTTGGTTATCTAATCTAGCTCCTGAAAAAATTTCAGAAATGGAAACAACTGGTTTAAGAAGTCCTATACTAGCATCTTATGTGGTTCCTGGTAGTGATGTCTGTGGTTTTCATAAGATGTTCGAAGCATTTGGTTTAGTAAGAAAAATGGAAAAAGGCACTATCAGATGGTATTACCCGCATAATCTTCACAACTTGGCATTTGATGTTGCTGCTCTGAAAACTGCATTGACTGAGCCACTCGATTCAGTTCGGTTATATTTATCAAGAGCAACCCTGATTATTGTTCCATCAAATCTAGTTGATCACTGGAAGACTCAAATTCAAAAACATATCAGACCTGGTCAGTTACTGGTTTATGTATGGACTGATCATAGAAAACCATCTGCACATTGTCTAGCATGGGATTATGATGTTATCATTACCACATTTAGTCGGTTAAGTGCAGAATGGGGGCCACGGAAGAGAAGTATATTAATGCAAGTGCATTGGCATAGGGTCATTTTAGATGAAGGGCACACCCTTGGCTCTAGTCTTAACTTAACAAACAAGTTGCAAATGGCTGTTTCTTTGATATCTTCAAATCGCTGGATATTAACAGGAACTCCAACTCCTAGCACACCTAATAGTCAGCTTTCACATCTTCAACCATTACTTAGGTTTCTTCATGAAGAAGCCTATGGTCAGAATCATAAGTCATGGGAGGCTGGTATACTTAGACCTTTTGAGGCAGAAATGGAGGAAGGAAGGTTACTTTTGTTAGACTTACTTCGTAGGTGTATGATTAGTGCAAGAAAGACGGACTTACTATCCATCCCTCCTTGCATCAAGAAGGTAAAATACCTAAATTTTACAGAAGAGCATGCTCGAAGTTACAATGAACTTGTAGTTACAGTGCGGCGTAATATATTGATGGCTGACTGGAATGATCCTTCTCATATTGAAAGTTTATTGAATCCGAAGCAATGGAAATCTCGAAGCACAACAATCAAGAACATCAGACTATCTTGCTGCGTGGCTGGACATATTAAAGTCGCAGAAGCTGGTGAAGATATTCAGGAAACCATGGATATTCTTGTTGATGATGGTCTGGATCCTATGTCACAGGAGTATTCTTTTATAAAATATAATCTTCTTTATGGCGGGAACTGTGCTAGGTGTGGGGAATGGTGTCGTTTACCTGTGATTGCACCCTGTAGGCATCTTCTTTGCCTTGATTGTGTTGCTTTGGATTGTGAAGGGTGTACCTTTCCTGGCTGTGGTAAATTATACGTGATGCAGACTCCTGAAACCATAGCACGGCCTGAAAATCCCAATCCAAAGTGGCCTGTTCCCAAAGACCTTATTGAGTTGCAACCATCATATAAGCAAGATAACTGGGATCCTGATTGGCAATCAACTTCTAGCAGTAAAGTTGCATATCTCATTCAGAGATTAAAAGCTTTAAGTGAAGCAAATGATGAAGCTGCTTTGTTCCCTCCCCCTTCATTGACTAAATCTGATTTAACCATTGCCGGCATCAGATTTGCTGGGATGTATAGTCCAATGCATGCTAGCAATAAGATGAAATCATTGGCCACGTTTCAGCATGATGCAAGCTGCATGGTGCTTTTGATGGATGGAAGTGCTGCACTGGGTCTTGATTTGAGCTTTGTAACTTACGTATTTCTAATGGAGCCAATCTGGGACAAAAGCATGGAGGAACAAGTGATTAGTCGTGCTCATCGGATGGGTGCTACTCGTCCTATTCATGTTGAAACCTTAGTAATGCATGAAACAATTGAAGAGCAAATGGTACAGTTTCTACAGGATACTGATGAGTGCAAAAGATTGATGAAGGAAGAATTTAGCAAGCCTGATTATGAAGGACCACGTGCTCATCGTTCAATGCATGATTTTGCTGGGAGCAATTATCTTTCTCAGCTCAAGTTTGTGAGGACAAATCCTATGATGGAAAAGGCTGTAGAGAATATTTAA

Coding sequence (CDS)

ATGGACGATGACGACTTCTCTGACTACAAGCTCTGCGGTTTCTTGTGTGTGGTTCTTGCCGTTCCTTCGCCGTTGTCCGAACTGGCGGATGCTCTACGTCCAGGTACGCGTTGTTATGTCTCTGTTGAGAGTTCTGATGTTTGTTTTACTTCCGAATATGGCGTCGTGCTTACTCCGATTGAAGCAAACCCCAAACCGCTCTCCAAGGCCGGTGTTTCGCCTCAAGATTCTGAGCAATGTAGGGGGACGGTAGGTGGAGAGGGAACTAGTACGGTGGAGAATGGTGATTTAACTTTGAAGCGGAAGATGTCTGCGAGAGGACGTAGGACCTCGGGGAAAAAGAGGACGAATAGGATGGGGCTGGTTCATGGCAGCATGAGCGTTGTGCATCAAATTCACGCTCTGGTAGTGCACAAGTGCTTGAAGATTGACGCGCAGGTGATTTTTGTTGACATTGGCGTTGATGAGGAGGCCCGAGCTGTGTTGTTGGTTGATGTTCATCTTCCCGTTGAATTGTGGTCCGGTTGGCAGTTTCCTAGATCCAAGACGGTTGCTGGTGCGCTATTTAGGCATTTGAGATTGACGCTCAAAAAGGCTATCGTTGGTCCAACCAAAGAACTTGATTGTGAATGGCAAGAAAGAAGCTCTCTACTTGTTGGAAAAGATCATTCTCAAGTTGCAGATATGGTTAGGAAGAGCGTGTGGAATCCCGCAGAATGTCATGTCCACAATTGCAAATTGCACAATAGTCCTGGAGGTTCTTCAAATAGAAGGCTCTTTGAACTTCATGAAATATTTAGAAGCTTACCGAGTATTCTTAGGTCATGCAAACCTGAATATACGAGAATACAACCAGAGGATGATTATTCTCAATCAGGCATATGGGACATATCAGATGACGTTCTGATTAATATAATGAAAGCTCTTCGCCCTTTGGATCTTATTAGGGTTGCTTCAACTTGCCACCATCTGAGATCCTTATCTGCATCAATCATGCCATGCATGAAACTCAAATTGTATCCTCACCAGCAGGCAGCTGTTGAATGGATGTTACACCGTGAGCGGAATGCTGAAGTTTTCTACCATCCTTTATATGTACCTTTTTCAACAGAAGATGGTTTTTCGTTCCACATAAATACCGTTACTGGTGAAATAGTCACTCTGGGGACCCCAGCTATCACTGATTTTCGTGGGGGGCTTTTCTGTGATGAACCGGGCTTAGGAAAGACAATAACTGCACTGTCCCTTATCTTAAAGACTCAGGGAACATTAGCAGAACCACCACCTGGAGTACAAATTGTTTGGTGCACACATAATGGCAACCGTAAATGTGGTTACTACGAGGTTAGCAGTAATAGTAATACTAGCACCAACAATTTATTGGTGAAGGAAGCTGTGGGCTGTAGTTCTCTGAAAGGAATGGAGGACTTAACATATCATACACCTAAAAGGGCAAGGCTGACGACTTTGGATGACAGACATACAGTAACTAATGATTCATGTGCTGGCAATGAGATGATATCTCCATCATCTACAGACTATGCAAAAGCAGTTCAAATGGTTCGATGCACTAGGAGCTTGAGTAGTGTCAAGAGAAATCTTCTTCTCACGTATGAAGGAGCATCTAGCCTTTCCAGACACCTGAATACTGGTAAAAAGTCAACAAGAACACGGACAAGGAAGTTGGCTGCTGGGGCAAAGAGAGCTGGTGTGTCTAATGGATTCACAAACAACTATGAGGTGTCTGAGACAACCACTGCAGATAAATTCGAATATAAGGACACATGGGTGCAGTGTGATGCTTGTCACAAGTGGCGGAAGCTTTCAGAAACTTCTATAGCTGATGCTAGTACAGCTTGGTTTTGTAGTATGAATACTGATCCTTTTTACCAAAGTTGCAGTGTTCCAGAAGAATCTTATGACAAGTGCCGTCCAATTACTAATATTCCAGGATTCTACAGCAAAGACACTTCTGGAGGCGAGGAGAAAAATATTTCGTTCTTCACCAGTGTGCTCAAGGAAAACATGGCACTGATAAATTCTGGAACAAAGAGAGCCTTGACTTGGTTATCTAATCTAGCTCCTGAAAAAATTTCAGAAATGGAAACAACTGGTTTAAGAAGTCCTATACTAGCATCTTATGTGGTTCCTGGTAGTGATGTCTGTGGTTTTCATAAGATGTTCGAAGCATTTGGTTTAGTAAGAAAAATGGAAAAAGGCACTATCAGATGGTATTACCCGCATAATCTTCACAACTTGGCATTTGATGTTGCTGCTCTGAAAACTGCATTGACTGAGCCACTCGATTCAGTTCGGTTATATTTATCAAGAGCAACCCTGATTATTGTTCCATCAAATCTAGTTGATCACTGGAAGACTCAAATTCAAAAACATATCAGACCTGGTCAGTTACTGGTTTATGTATGGACTGATCATAGAAAACCATCTGCACATTGTCTAGCATGGGATTATGATGTTATCATTACCACATTTAGTCGGTTAAGTGCAGAATGGGGGCCACGGAAGAGAAGTATATTAATGCAAGTGCATTGGCATAGGGTCATTTTAGATGAAGGGCACACCCTTGGCTCTAGTCTTAACTTAACAAACAAGTTGCAAATGGCTGTTTCTTTGATATCTTCAAATCGCTGGATATTAACAGGAACTCCAACTCCTAGCACACCTAATAGTCAGCTTTCACATCTTCAACCATTACTTAGGTTTCTTCATGAAGAAGCCTATGGTCAGAATCATAAGTCATGGGAGGCTGGTATACTTAGACCTTTTGAGGCAGAAATGGAGGAAGGAAGGTTACTTTTGTTAGACTTACTTCGTAGGTGTATGATTAGTGCAAGAAAGACGGACTTACTATCCATCCCTCCTTGCATCAAGAAGGTAAAATACCTAAATTTTACAGAAGAGCATGCTCGAAGTTACAATGAACTTGTAGTTACAGTGCGGCGTAATATATTGATGGCTGACTGGAATGATCCTTCTCATATTGAAAGTTTATTGAATCCGAAGCAATGGAAATCTCGAAGCACAACAATCAAGAACATCAGACTATCTTGCTGCGTGGCTGGACATATTAAAGTCGCAGAAGCTGGTGAAGATATTCAGGAAACCATGGATATTCTTGTTGATGATGGTCTGGATCCTATGTCACAGGAGTATTCTTTTATAAAATATAATCTTCTTTATGGCGGGAACTGTGCTAGGTGTGGGGAATGGTGTCGTTTACCTGTGATTGCACCCTGTAGGCATCTTCTTTGCCTTGATTGTGTTGCTTTGGATTGTGAAGGGTGTACCTTTCCTGGCTGTGGTAAATTATACGTGATGCAGACTCCTGAAACCATAGCACGGCCTGAAAATCCCAATCCAAAGTGGCCTGTTCCCAAAGACCTTATTGAGTTGCAACCATCATATAAGCAAGATAACTGGGATCCTGATTGGCAATCAACTTCTAGCAGTAAAGTTGCATATCTCATTCAGAGATTAAAAGCTTTAAGTGAAGCAAATGATGAAGCTGCTTTGTTCCCTCCCCCTTCATTGACTAAATCTGATTTAACCATTGCCGGCATCAGATTTGCTGGGATGTATAGTCCAATGCATGCTAGCAATAAGATGAAATCATTGGCCACGTTTCAGCATGATGCAAGCTGCATGGTGCTTTTGATGGATGGAAGTGCTGCACTGGGTCTTGATTTGAGCTTTGTAACTTACGTATTTCTAATGGAGCCAATCTGGGACAAAAGCATGGAGGAACAAGTGATTAGTCGTGCTCATCGGATGGGTGCTACTCGTCCTATTCATGTTGAAACCTTAGTAATGCATGAAACAATTGAAGAGCAAATGGTACAGTTTCTACAGGATACTGATGAGTGCAAAAGATTGATGAAGGAAGAATTTAGCAAGCCTGATTATGAAGGACCACGTGCTCATCGTTCAATGCATGATTTTGCTGGGAGCAATTATCTTTCTCAGCTCAAGTTTGTGAGGACAAATCCTATGATGGAAAAGGCTGTAGAGAATATTTAA

Protein sequence

MDDDDFSDYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLTPIEANPKPLSKAGVSPQDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTVAGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKRARLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSLSRHLNTGKKSTRTRTRKLAAGAKRAGVSNGFTNNYEVSETTTADKFEYKDTWVQCDACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGGEEKNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSDVCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATLIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNLLYGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLIQRLKALSEANDEAALFPPPSLTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMHETIEEQMVQFLQDTDECKRLMKEEFSKPDYEGPRAHRSMHDFAGSNYLSQLKFVRTNPMMEKAVENI

Homology

[Close]

BLAST of Cp4.1LG01g14940 vs. Swiss-Prot
Match: FB304_ARATH (F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1)

HSP 1 Score: 1377.1 bits (3563), Expect = 0.0e+00
Identity = 734/1416 (51.84%), Postives = 932/1416 (65.82%), Query Frame = 1


Query: 8    DYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLT---PIEANP 67
            D+KLCGFLC VL+V SP     D L+ G+ C++  + S   F SE G++L+   PI    
Sbjct: 4    DHKLCGFLCTVLSVDSP-----DLLQSGSSCFIFNDGSVTGFKSENGLILSLTNPISNLQ 63

Query: 68   KPLSKAG---------------VSPQDSEQCRGTVGGEGTSTVENGDLTLKRKM--SARG 127
              +S  G                +PQ   +C      EG S+ +      KR++   ++ 
Sbjct: 64   SLISSKGDHDVENSGTIEDGRLETPQKRRKCV-----EGESSGKRKTPKSKRRVLSGSKE 123

Query: 128  RRTSGKKRTNRMGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVH 187
            +   G+KR   +G+V+GS+SVV Q+HALV +KCLKI  +V+ VD G + E RAV+LVDV+
Sbjct: 124  KTVQGRKRVKSIGMVNGSISVVQQLHALVANKCLKIICRVVKVDKGENGEERAVVLVDVY 183

Query: 188  LPVELWSGWQFPRSKTVAGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVA 247
            LP+ELWSGWQFP+S+  A ALF+HL                C+W  R S+L GK   + A
Sbjct: 184  LPIELWSGWQFPKSQATAAALFKHL---------------SCDWGLRVSILDGKSIWEEA 243

Query: 248  DMVRKSVWNPAECHVHNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPED 307
            +   K++W+ ++CHV +CKL  +   S  RRLF+LHEIF+SLPS         +R+ P  
Sbjct: 244  NGRIKAIWDLSDCHVFDCKLLCNAPNSPKRRLFKLHEIFKSLPSPGNHDVSYSSRVLPST 303

Query: 308  DYSQSGIWDISDDVLINIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAV 367
            D   SG+WD+SDDVLI+I+  L   DL  +A+ C   RSL++ I+PCM LKL+PHQQAAV
Sbjct: 304  DSCVSGVWDLSDDVLISILMKLDTKDLFSIAAVCRLFRSLTSLIVPCMNLKLFPHQQAAV 363

Query: 368  EWMLHRERNAEVFYHPLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGL 427
             WML RER AEV  HPLY+ F TEDGFSF++N VTG+I+T   P + DFRGG+FCDEPGL
Sbjct: 364  GWMLERERKAEVSSHPLYLSFDTEDGFSFYVNAVTGDIITEAAPMVKDFRGGMFCDEPGL 423

Query: 428  GKTITALSLILKTQGTLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVG 487
            GKTITALSLILKTQGT+A+PP G+ IVWCTH  ++KC YYE +S+  TS +   VK    
Sbjct: 424  GKTITALSLILKTQGTMADPPEGLPIVWCTHKSDKKCAYYEYTSDQFTSNSMSAVKRFQS 483

Query: 488  CSSLKGMEDLTYHTP---------KRARLTTLDDRHTVTNDSCAGNEMIS--PSSTDYAK 547
             SS +         P         K+ARL   DD+   + +S   NE  +  P+S D   
Sbjct: 484  PSSCRNQVSFEAFRPLLESKSLPFKQARLMDPDDQTLESKNSNFENEFETHIPASLDLK- 543

Query: 548  AVQMVRCTRSLSSVKRNLLLTYEGASSLSRHLNTGKKSTRTRTRKLAAGAKRAGVSNGFT 607
                 +C +SL +V++NLL  Y GAS LS  +   K+ +  +   +  G KR G+++   
Sbjct: 544  ----AQCRKSLGNVRKNLLPAYNGASELSEVMEA-KRISNWKKCGMITGCKRKGLTDSDV 603

Query: 608  NNYEVSETTTADKFEYKDTWVQCDACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVP 667
             +               D W+QCD+C KWR++ +  ++   +AWFCS N DP YQSC+ P
Sbjct: 604  ES---------------DIWMQCDSCSKWRRIIDEGVSVTGSAWFCSNNNDPAYQSCNDP 663

Query: 668  EESYDKCRPITNIPGFYSKDTSGGEEKNISFFTSVLKENMALINSGTKRALTWLSNLAPE 727
            EE +DK +PI  + GFY+K  SG E  NISFFTSVL+E+ + ++S  K+AL WL+ L  E
Sbjct: 664  EELWDKSQPIKYLQGFYTKGASGEESDNISFFTSVLREHKSSVSSTVKKALIWLAKLPLE 723

Query: 728  KISEMETTGLRSPILASYVVPGSDVCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFD 787
            K+S+MET GL  P+L   +    D  GF ++F AFGL  ++EKG  +W+YP  L NL FD
Sbjct: 724  KLSQMETVGLPGPVLGLKL----DALGFQRIFRAFGLKSRVEKGVTKWFYPKFLENLVFD 783

Query: 788  VAALKTALTEPLDSVRLYLSRATLIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPS 847
            V ALK AL +PLD+ RLYLS+ATLI+VP+NLV+HW TQIQKH+   QL + VW DH + S
Sbjct: 784  VPALKVALCQPLDTFRLYLSKATLIVVPTNLVNHWLTQIQKHVCSDQLRILVWADHIELS 843

Query: 848  AHCLAWDYDVIITTFSRLSAEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAV 907
             H LAWDYDV+ITTFSRLSAEW PRK+S L+QVHW RV+LDEGHTLGSS++LTNK QMAV
Sbjct: 844  PHSLAWDYDVVITTFSRLSAEWNPRKKSPLIQVHWLRVMLDEGHTLGSSVSLTNKFQMAV 903

Query: 908  SLISSNRWILTGTPTPSTPNSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEG 967
            SL + NRW+LTGTPTP+TPNSQLSH+QPLL+FLHEE YG+N K WEAGILRPFEAEMEEG
Sbjct: 904  SLTACNRWLLTGTPTPNTPNSQLSHIQPLLKFLHEEVYGENPKFWEAGILRPFEAEMEEG 963

Query: 968  RLLLLDLLRRCMISARKTDLLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWN 1027
            RL LL LL+RCMIS+RK DL  IPPCIKKV YLNF   HARSYNELV TVRRNIL+ADWN
Sbjct: 964  RLRLLQLLQRCMISSRKKDLQMIPPCIKKVTYLNFLPGHARSYNELVETVRRNILLADWN 1023

Query: 1028 DPSHIESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQ 1087
            DPSH+ESLLN KQWK RS TI N+RLSCCVAGHIK+ +AG DI+ETMD L+++ LD  ++
Sbjct: 1024 DPSHVESLLNSKQWKFRSITISNVRLSCCVAGHIKMTDAGHDIKETMDALLENDLDLWTE 1083

Query: 1088 EYSFIKYNLLYGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTP 1147
            EYSFI+ +L+ G NC RCGEWCRLPVI PCRHLLCLDCVALD E CT  GCG LY MQTP
Sbjct: 1084 EYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHLLCLDCVALDSERCTISGCGYLYEMQTP 1143

Query: 1148 ETIARPENPNPKWPVPK-------------------------------DLIELQPSYKQ- 1207
            ET+ARPENPNPKWPVPK                                L +L    K+ 
Sbjct: 1144 ETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVSYLVDRLRKLHEGNKKS 1203

Query: 1208 ---------DNWDPDWQSTSSSKVAYLIQRLKALSEAN--DEAALFPP----PSLTKSDL 1267
                     DN + +   TS + +   +      S+    D+  +F        + +  L
Sbjct: 1204 ILSFNKTDNDNLEDNPPGTSEAFLGKELHGQDCGSQMVFVDKVLIFSQFLEHIHVIEQQL 1263

Query: 1268 TIAGIRFAGMYSPMHASNKMKSLATFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIW 1327
            T AGI+F  MYSPM + NKMK+LA FQ+DA CM LLMDGS ALGLDLSFVT+VFLMEPIW
Sbjct: 1264 TTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMDGSGALGLDLSFVTHVFLMEPIW 1323

Query: 1328 DKSMEEQVISRAHRMGATRPIHVETLVMHETIEEQMVQFLQDTDECKRLMKEEFSKPDYE 1346
            DKS+EEQVISRAHRMGA RPI VETL M  TIEEQM++FL+D ++  RL+  ++ +   E
Sbjct: 1324 DKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRFLEDAEKSDRLLSGDYIEAKQE 1369

[Close]

BLAST of Cp4.1LG01g14940 vs. Swiss-Prot
Match: SM3L2_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arabidopsis thaliana GN=At5g22750 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-39
Identity = 146/547 (26.69%), Postives = 234/547 (42.78%), Query Frame = 1


Query: 780  LIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWG 839
            LI+ P  L+  WKT+I+ H +PG L VYV     +P    L    DV+ITT+  L++E+ 
Sbjct: 493  LIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSEFS 552

Query: 840  PRKRSI---LMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPN 899
                +    +  V W R++LDE HT+ +S +  +    A +L++  RW LTGTP      
Sbjct: 553  QENSADHEGIYAVRWFRIVLDEAHTIKNSKSQIS--LAAAALVADRRWCLTGTPI----Q 612

Query: 900  SQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTD- 959
            + L  L  LLRFL  E +G     W   + +PFE   E G  L+  +L+  M+   K+  
Sbjct: 613  NNLEDLYSLLRFLRIEPWG-TWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSST 672

Query: 960  ------LLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMAD---------WNDPSH 1019
                  +L +PP   +V Y   +E     Y+ L    +R+ +  D          N  S 
Sbjct: 673  DREGRPILVLPPADARVIYCELSESERDFYDAL---FKRSKVKFDQFVEQGKVLHNYASI 732

Query: 1020 IESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDI--------------L 1079
            +E LL  +Q              CC   H  +  +  D  E  D+              L
Sbjct: 733  LELLLRLRQ--------------CC--DHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGL 792

Query: 1080 VDDGLDPMSQEY-SFIKYNLLYG--GNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCT 1139
              +G D  S+ +   +   L  G  G C  C E     V+ PC H LC +C+       T
Sbjct: 793  EREGKDVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNST 852

Query: 1140 FPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLI 1199
               C                 P  +  V K  +   P+  +   D +     SSK+  L+
Sbjct: 853  SGLC-----------------PVCRNTVSKQELITAPTESRFQVDVEKNWVESSKITALL 912

Query: 1200 QRLKALSEANDEAALFPP----PSLTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQHDA 1259
            + L+ L  +  ++ LF        L +  L+     F  +   +    + K L  F  D 
Sbjct: 913  EELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDG 972

Query: 1260 SCMVLLMDGSA-ALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMH 1286
            S +VLLM   A  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +   ++ 
Sbjct: 973  SILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVK 996

[Close]

BLAST of Cp4.1LG01g14940 vs. Swiss-Prot
Match: SM3L3_ARATH (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arabidopsis thaliana GN=At5g43530 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.8e-33
Identity = 152/551 (27.59%), Postives = 237/551 (43.01%), Query Frame = 1


Query: 779  TLIIVPSNLVDHWKTQIQKHIRPG--QLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSA 838
            TLII P  L+  WK +++ H +P    +LVY   D R   A  +A  +DV++TT+  L++
Sbjct: 743  TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGD-RTHDAKAIA-SHDVVLTTYGVLTS 802

Query: 839  EWGP-RKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTP 898
             +      SI  ++ W+R++LDE HT+ S    T   +    L S  RW LTGTP     
Sbjct: 803  AYKQDMANSIFHRIDWYRIVLDEAHTIKSWK--TQAAKATFELSSHCRWCLTGTPL---- 862

Query: 899  NSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTD 958
             ++L  L  LL FLH E +  N   W   I +P+E     G  L+  +LR  M+   K  
Sbjct: 863  QNKLEDLYSLLCFLHVEPWC-NWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKET 922

Query: 959  -------LLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADW---------NDPS 1018
                   +L +PP   +V     +E     Y  L    +R+ +  D          N  +
Sbjct: 923  RDKEGSLILELPPTDVQVIECEQSEAERDFYTALF---KRSKVQFDQFVAQGKVLHNYAN 982

Query: 1019 HIESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDIL----VDDGLDPMS 1078
             +E LL  +Q              CC    + ++ A       +D L    +D+  D +S
Sbjct: 983  ILELLLRLRQ--------------CCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVS 1042

Query: 1079 QEYSFIKY-----NLLYGGN---CARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGC 1138
            Q      Y       L  GN   C  C E    PV+ PC H +C +C+         P C
Sbjct: 1043 QNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRS---PSC 1102

Query: 1139 GKLYVMQT----PETIARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLI 1198
            G   + +T     E I+ P +   +  V K            NW        SSKV+ L+
Sbjct: 1103 GLCPICRTILKRTELISCPTDSIFRVDVVK------------NWK------ESSKVSELL 1162

Query: 1199 QRLKAL--SEANDEAALFPPPS----LTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQH 1258
            + L+ +  S + +++ +F   +    L +  L   G  F      +    + K L  F  
Sbjct: 1163 KCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNE 1222

Query: 1259 DASCMVLLMDGSAA-LGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLV 1288
                 +LLM   A  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V   +
Sbjct: 1223 TKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFI 1246

[Close]

BLAST of Cp4.1LG01g14940 vs. Swiss-Prot
Match: HLTF_HUMAN (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-31
Identity = 133/543 (24.49%), Postives = 236/543 (43.46%), Query Frame = 1


Query: 777  RATLIIVPSNLVDHWKTQIQKHIRPG-QLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLS 836
            R TLII P +++ +W  Q  +HI+    L  YV+    +     L    D+++TT++ L+
Sbjct: 476  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPALLSKQDIVLTTYNILT 535

Query: 837  AEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTP 896
             ++G +  S L  + W RVILDEGH + +      + +  + L S  RW+LTGTP     
Sbjct: 536  HDYGTKGDSPLHSIRWLRVILDEGHAIRNPN--AQQTKAVLDLESERRWVLTGTPI---- 595

Query: 897  NSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTD 956
             + L  L  LL FL  + +  + + W   I RP     E G   L  L++   +   KT 
Sbjct: 596  QNSLKDLWSLLSFLKLKPF-IDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 655

Query: 957  ------LLSIPPCIKKVKYLNFTEEHARSY----NELVVTVRR----NILMADWNDPSHI 1016
                  +L +P     ++++  ++E  + Y    NE   T+ R      ++A + D   +
Sbjct: 656  KIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADV--L 715

Query: 1017 ESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFI 1076
              LL  +Q    +  + N   S   +G+    E  + +   M +++  G D         
Sbjct: 716  GLLLRLRQICCHTYLLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDE-------- 775

Query: 1077 KYNLLYGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIAR 1136
                     CA C +   +PVI  C H+ C  C+   C+                  + +
Sbjct: 776  --------ECAICLDSLTVPVITHCAHVFCKPCI---CQ------------------VIQ 835

Query: 1137 PENPNPKWPVPK------DLIELQPS--YKQDNWDPDWQSTSSSKVAYLIQRLKALSEAN 1196
             E P+ K P+ +      +L+E  P    +      D + TSSSK+  L+  L  L + N
Sbjct: 836  NEQPHAKCPLCRNDIHEDNLLECPPEELARDSEKKSDMEWTSSSKINALMHALTDLRKKN 895

Query: 1197 DEAALFPPP------SLTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQH---DASCMVL 1256
                           SL +  L  +G  F  +   M    +++S+  FQ+    +  ++L
Sbjct: 896  PNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIML 955

Query: 1257 LMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMHETIEEQ 1288
            L   +  +GL+LS  + VFLM+P W+ + E+Q   R HR+G  + + +   ++ +++EE 
Sbjct: 956  LSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEEN 972

[Close]

BLAST of Cp4.1LG01g14940 vs. Swiss-Prot
Match: HLTF_RABIT (Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-29
Identity = 134/552 (24.28%), Postives = 243/552 (44.02%), Query Frame = 1


Query: 777  RATLIIVPSNLVDHWKTQIQKHIRPG-QLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLS 836
            R TLII P +++ +W  Q  +HI+    L  YV+    +     L    D+++TT++ L+
Sbjct: 473  RTTLIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILT 532

Query: 837  AEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTP 896
             ++G +  S L  + W RVILDEGH + +      + +  + L +  RW+LTGTP  ++ 
Sbjct: 533  HDYGTKGDSPLHSIRWLRVILDEGHAIRNPN--AQQTKAVLDLEAERRWVLTGTPIQNS- 592

Query: 897  NSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTD 956
               L  L  LL FL  + +  + + W   I RP     E G   L  L++   +   KT 
Sbjct: 593  ---LKDLWSLLSFLKLKPF-VDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTS 652

Query: 957  LLSIPPCIKK------VKYLNFTEEHARSY----NELVVTVRR----NILMADWNDPSHI 1016
             +   P ++       ++++  ++E  + Y    +E   T+ R      ++A + D   +
Sbjct: 653  KIKGKPVLELPERPVFIQHITLSDEERKIYQSVKSEGKATIGRYFNEGTVLAHYADVLGL 712

Query: 1017 ESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFI 1076
              LL  +Q    +  + N   S   +G+    E  + + + M +++  G D         
Sbjct: 713  --LLRLRQICCHTHLLTNTVSSSGPSGNDTPEELRKKLIKKMKLILSSGSDE-------- 772

Query: 1077 KYNLLYGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIAR 1136
                     CA C +   +PVI  C H+ C  C+   C+                    +
Sbjct: 773  --------ECAICLDSLTVPVITHCAHVFCKPCI---CQ------------------CIQ 832

Query: 1137 PENPNPKWPVPKD------LIELQP------SYKQDNWDPDWQSTSSSKVAYLIQRLKAL 1196
             E P+ K P+ ++      L+E  P      S K+ N +  W  TSSSK+  L+  L  L
Sbjct: 833  NEQPHAKCPLCRNDIHGDNLLECPPEELACDSEKKSNME--W--TSSSKINALMHALIDL 892

Query: 1197 SEANDEAALFPPP------SLTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQHDAS--- 1256
               N               SL ++ L  +G  F  +   M    +++S+  FQ+  +   
Sbjct: 893  RTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSP 952

Query: 1257 CMVLLMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMHET 1293
             ++LL   +  +GL+L   + VFLM+P W+ + E+Q   R HR+G  + + +   ++ ++
Sbjct: 953  TIMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQRFDRCHRLGQKQEVIITKFIVKDS 973

[Close]

BLAST of Cp4.1LG01g14940 vs. TrEMBL
Match: A0A0A0KTQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623770 PE=4 SV=1)

HSP 1 Score: 2330.4 bits (6038), Expect = 0.0e+00
Identity = 1148/1384 (82.95%), Postives = 1222/1384 (88.29%), Query Frame = 1


Query: 6    FSDYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLTPIEANPK 65
            FSDYKLCGFLCVVLAVPSP  +L + LRPGTRCYVS ESSDVCFTS+ GV+L+PIE +PK
Sbjct: 7    FSDYKLCGFLCVVLAVPSPQFDLLNLLRPGTRCYVSTESSDVCFTSQNGVLLSPIEESPK 66

Query: 66   PLSKAGVSPQDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHGS 125
             L K GV PQDSEQCRGTV GEG    E GD T KR  SA G R+S KKRTNRMGLVHG+
Sbjct: 67   SLFKPGVLPQDSEQCRGTVNGEGIGAAEIGDFTPKRGASAGGSRSSRKKRTNRMGLVHGN 126

Query: 126  MSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTVA 185
            MSVV+QIHALVVHKC+KIDAQVIF+DI   +EARAVLLVDV+LPVELWSGWQFP+SKT+A
Sbjct: 127  MSVVYQIHALVVHKCMKIDAQVIFLDI---QEARAVLLVDVYLPVELWSGWQFPKSKTIA 186

Query: 186  GALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHNC 245
             ALF+HL                CEWQERSS+LVGKDHSQ   +V KSV N AECHVHNC
Sbjct: 187  AALFKHL---------------SCEWQERSSILVGKDHSQDVHVVGKSVSNLAECHVHNC 246

Query: 246  KLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINI 305
            +LHNS GGS NRRLFELHEIFRSLPSIL+S KPEYTR+QPEDDYSQSG+WDISDD+L NI
Sbjct: 247  QLHNSSGGSPNRRLFELHEIFRSLPSILKSSKPEYTRMQPEDDYSQSGLWDISDDILFNI 306

Query: 306  MKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPLY 365
            +K LRPLDL+RVASTC HLRSL+A IMPCMKLKLYPHQQAAVEWMLHRER+AE FYHPLY
Sbjct: 307  LKVLRPLDLVRVASTCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAESFYHPLY 366

Query: 366  VPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA 425
             PFSTEDGFSFH+NTVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA
Sbjct: 367  APFSTEDGFSFHVNTVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA 426

Query: 426  EPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKRA 485
            EPPPG QIVWCTHNGNRKCGYYEVSS SNT TN+ ++KEAV  + LKG+EDLTYHTPKRA
Sbjct: 427  EPPPGAQIVWCTHNGNRKCGYYEVSSTSNTITNHFVLKEAVEWNPLKGLEDLTYHTPKRA 486

Query: 486  RLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSLS 545
            R+TTLDDRHT TN+SCAGNE+ SPSS     AV MVRCTRSLSSVKRNLLL YEGASSLS
Sbjct: 487  RMTTLDDRHT-TNNSCAGNELSSPSS-----AVDMVRCTRSLSSVKRNLLLAYEGASSLS 546

Query: 546  RHLNTGKKSTRTRTRKLAAGAKRAGVS-----NGFTNNYEVSETTTADKFEYKDTWVQCD 605
            + LN GKKSTRTRTRK   G K+ G S     NGFTNNYEV  TT ADKFEYKDTWVQCD
Sbjct: 547  KELNDGKKSTRTRTRKFPVGEKKVGASPASPSNGFTNNYEVLGTTNADKFEYKDTWVQCD 606

Query: 606  ACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGG 665
            ACHKWRKL+ETS+AD+S AWFCSM+TDPFYQSCSVPEESYDKCRPITN+ GFYSK+TSGG
Sbjct: 607  ACHKWRKLAETSVADSSAAWFCSMHTDPFYQSCSVPEESYDKCRPITNLLGFYSKETSGG 666

Query: 666  EEKNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSD 725
            E+KN+SFFTSVLKEN ALINSGTKR LTWLS+L PEKISEME TGLRSPIL SY++PG +
Sbjct: 667  EKKNVSFFTSVLKENRALINSGTKRTLTWLSSLTPEKISEMERTGLRSPILTSYIIPGGN 726

Query: 726  VCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATL 785
            V GFH++ +AFGLVRKMEKGT+RWYYP NLHNLAFDVAAL+ AL+EPLD VRLYLSRATL
Sbjct: 727  VRGFHQIIDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATL 786

Query: 786  IIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGP 845
            I+VPSNLVDHWKTQIQKH+RPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGP
Sbjct: 787  IVVPSNLVDHWKTQIQKHVRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGP 846

Query: 846  RKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLS 905
            RKRSILMQVHW RVILDEGHTLGSSLNLTNKLQMA+SL+S+NRWILTGTPTP+TPNSQLS
Sbjct: 847  RKRSILMQVHWSRVILDEGHTLGSSLNLTNKLQMAISLVSTNRWILTGTPTPNTPNSQLS 906

Query: 906  HLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIP 965
            HLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLL+LLRRCMISARK DLL+IP
Sbjct: 907  HLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKIDLLTIP 966

Query: 966  PCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNI 1025
            PCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSH+ESLLNPKQWK RS TIKNI
Sbjct: 967  PCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNI 1026

Query: 1026 RLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNLLYGGNCARCGEWCRL 1085
            RLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYS++KYNLLYGG+C+RCGEWCRL
Sbjct: 1027 RLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRL 1086

Query: 1086 PVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQP 1145
            PVIAPCRHLLCLDCVALD EGCTFPGCGKLYVMQTPET+ARPENPNPKWPVPKDLIELQP
Sbjct: 1087 PVIAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQP 1146

Query: 1146 SYKQDNWDPDWQSTSSSKVAYLIQRLKALSEANDEAALFPPPSLTKS------------- 1205
            SYKQDNWDPDWQSTSSSKVAYLI+RLK LSE N+EAAL PP SLTKS             
Sbjct: 1147 SYKQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEAALLPPSSLTKSGALLQEVDHSRAI 1206

Query: 1206 --------------------------DLTIAGIRFAGMYSPMHASNKMKSLATFQHDASC 1265
                                       LTIAGIRFAGMYSPMHASNKMKSLA FQHDASC
Sbjct: 1207 TSDHEIVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASC 1266

Query: 1266 MVLLMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMHETI 1325
            MVLLMDGSAALGLDLSFVTYVFLMEPIWD+SMEEQVISRAHRMGA RPIHVETLVMHETI
Sbjct: 1267 MVLLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETI 1326

Query: 1326 EEQMVQFLQDTDECKRLMKEEFSKPDYEGPRAHRSMHDFAGSNYLSQLKFVRTNPMMEKA 1346
            EEQMVQFLQD DECKRLMKEEF KPDYEGPRAHRS+HDFAGSNYLSQLKFVRT P MEK 
Sbjct: 1327 EEQMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVRTKPTMEKV 1366

[Close]

BLAST of Cp4.1LG01g14940 vs. TrEMBL
Match: E5GCJ6_CUCME (Chromatin remodeling complex subunit (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1800.0 bits (4661), Expect = 0.0e+00
Identity = 888/1051 (84.49%), Postives = 945/1051 (89.91%), Query Frame = 1


Query: 5    DFSDYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLTPIEANP 64
            DFSD+KLCGFL VVLAV SP SE  + LRPGTRCYVS ESSDVCFTS+ GVVL+P+E NP
Sbjct: 6    DFSDFKLCGFLSVVLAVSSPQSEFLNLLRPGTRCYVSAESSDVCFTSQNGVVLSPLEENP 65

Query: 65   KPLSKAGVSPQDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHG 124
            K LSK G  PQDSEQCRG V GEG    E G LT KR +SA G R+S KKRTNRMGLVHG
Sbjct: 66   KSLSKPGALPQDSEQCRGAVNGEGIGAAEIGILTPKRGVSAGGSRSSRKKRTNRMGLVHG 125

Query: 125  SMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTV 184
            +MSVV+QIHALVVHKC+KIDAQV FVDI   +EARAVLLVDV+LPVELWSGWQFP+SKTV
Sbjct: 126  NMSVVYQIHALVVHKCMKIDAQVTFVDI---QEARAVLLVDVYLPVELWSGWQFPKSKTV 185

Query: 185  AGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHN 244
            A ALF+HL                CEWQERSS+LVGKDHSQ   MV KSV N AECHVHN
Sbjct: 186  AAALFKHL---------------SCEWQERSSILVGKDHSQDVHMVGKSVSNVAECHVHN 245

Query: 245  CKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLIN 304
            CKLHNS GGS NRRLFELHEIFRSLPSIL+S KPEYTR+QPEDDY+QSGIWDISDD+L N
Sbjct: 246  CKLHNSSGGSPNRRLFELHEIFRSLPSILKSSKPEYTRMQPEDDYAQSGIWDISDDILFN 305

Query: 305  IMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPL 364
            I+KALRPLDL+RVASTC HLRSL+A IMPCMKLKLYPHQQAAVEWMLHRER+AEVFYHPL
Sbjct: 306  ILKALRPLDLVRVASTCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAEVFYHPL 365

Query: 365  YVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTL 424
            + P STEDGFSFH+NTVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTL
Sbjct: 366  FAPSSTEDGFSFHVNTVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTL 425

Query: 425  AEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKR 484
            AEPPPGVQIVWCTHNGNRKCGYYEVSS SNT TN+ L+KEAV  +SLKG+EDLTY TPKR
Sbjct: 426  AEPPPGVQIVWCTHNGNRKCGYYEVSSTSNTITNHFLLKEAVEWNSLKGLEDLTYRTPKR 485

Query: 485  ARLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSL 544
            AR+TTLDDRHT TN SCAGNE+ SPSS DYAKAV MVRCTRSLSSVKRNLLL YEGASSL
Sbjct: 486  ARMTTLDDRHT-TNSSCAGNELRSPSSADYAKAVHMVRCTRSLSSVKRNLLLAYEGASSL 545

Query: 545  SRHLNTGKKSTRTRTRKLAAGAKRAGVS--NGFTNNYEVSETTTADKFEYKDTWVQCDAC 604
            S+ LN GKKSTRTRTRK   G K+ G S  NG TNNYE   TT ADKFEYKDTWVQCDAC
Sbjct: 546  SKELNDGKKSTRTRTRKFPVGEKKVGASPSNGSTNNYEALGTTNADKFEYKDTWVQCDAC 605

Query: 605  HKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGGEE 664
            HKWRKL+ETSIAD+  AWFCSM+T+PFYQSCSVPEESYDKCRPITN+ GFYSK+TSGGEE
Sbjct: 606  HKWRKLAETSIADSGAAWFCSMHTNPFYQSCSVPEESYDKCRPITNLLGFYSKETSGGEE 665

Query: 665  KNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSDVC 724
            KNISFFTSVLKEN ALINSGTKRALTWLS+L PEKISEME TGLRSPIL SY+VPG +V 
Sbjct: 666  KNISFFTSVLKENRALINSGTKRALTWLSSLMPEKISEMERTGLRSPILTSYIVPGGNVR 725

Query: 725  GFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATLII 784
            GFH++F+AFGLVRKMEKGT+RWYYP NLHNLAFDVAAL+ AL+EPLD VRLYLSRATLI+
Sbjct: 726  GFHQIFDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATLIV 785

Query: 785  VPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 844
            VPSNLVDHWKTQIQKH+RPGQL VYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK
Sbjct: 786  VPSNLVDHWKTQIQKHVRPGQLQVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 845

Query: 845  RSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLSHL 904
            RSILMQVHW+RVILDEGHTLGSSLNLTNKLQMAVSL+S+NRWILTGTPTP+TPNSQLSHL
Sbjct: 846  RSILMQVHWNRVILDEGHTLGSSLNLTNKLQMAVSLVSTNRWILTGTPTPNTPNSQLSHL 905

Query: 905  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIPPC 964
            QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLL+LLRRCMISARKTDLL+IPPC
Sbjct: 906  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKTDLLTIPPC 965

Query: 965  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNIRL 1024
            IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSH+ESLLNPKQWK R  TIKNIRL
Sbjct: 966  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRCATIKNIRL 1025

Query: 1025 SCCVAGHIKVAEAGEDIQETMDILVDDGLDP 1054
            SCCVAGHIKVAEAGEDIQETMDILVDDGLDP
Sbjct: 1026 SCCVAGHIKVAEAGEDIQETMDILVDDGLDP 1037

[Close]

BLAST of Cp4.1LG01g14940 vs. TrEMBL
Match: W9RB23_9ROSA (F-box protein OS=Morus notabilis GN=L484_023953 PE=4 SV=1)

HSP 1 Score: 1652.5 bits (4278), Expect = 0.0e+00
Identity = 840/1383 (60.74%), Postives = 1009/1383 (72.96%), Query Frame = 1


Query: 8    DYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYG-VVLTPIEANPKP 67
            D +LCGFLC VL V S   E       GT  ++  E+S V F S  G VVL+P+      
Sbjct: 15   DLELCGFLCAVLTVTSSSHETPPL---GTHFHIFRENSSVGFRSPAGDVVLSPV------ 74

Query: 68   LSKAGVSPQDSEQCRGTVGGEGT-STVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHGS 127
                 +SPQ  E+   +   E    + +      KR+ S  G  +  K R   +G+V+GS
Sbjct: 75   -----ISPQRCEETGPSSEKENAFGSAKENRKRPKRRKSNSGGCSKKKTRKRSIGMVNGS 134

Query: 128  MSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTVA 187
            MSVV  +HALV HKCL+I A+++  + GV  E RAVLLVDV+LP+ LWS WQFP+  +VA
Sbjct: 135  MSVVELLHALVTHKCLQITARLVRTEAGVGGEVRAVLLVDVYLPIALWSEWQFPKYGSVA 194

Query: 188  GALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHNC 247
            GALFRHL                C+W  RSS++ G D+ + A    +S+W+ ++CHV  C
Sbjct: 195  GALFRHL---------------SCDWGHRSSMMAGGDYIKDALGASRSMWDLSDCHVLAC 254

Query: 248  KLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINI 307
            KLH     SS +RLFELHEIF+SLPS+ +    +  RIQP DD  +SGIW++SDD+LINI
Sbjct: 255  KLHYRITDSSKKRLFELHEIFKSLPSVAKMGYNDTFRIQPVDDSCRSGIWELSDDILINI 314

Query: 308  MKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPLY 367
            +  L P++L++VA+TC HLR L+A IMPCMKLKL+PHQQAAV+WMLHRE+ AE   HPLY
Sbjct: 315  LAPLGPVELVKVAATCRHLRFLAALIMPCMKLKLFPHQQAAVQWMLHREQRAEALPHPLY 374

Query: 368  VPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA 427
              F TEDG SF+I+T++GEI+   TP I DFRGG+FCDEPGLGKTITALSLILKTQG +A
Sbjct: 375  TAFVTEDGLSFYISTISGEIIYGETPTINDFRGGMFCDEPGLGKTITALSLILKTQGKVA 434

Query: 428  EPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKRA 487
            +PP GV+I+WCTHNGN++CGYYE+  +    +N  L K  V   +    E L  ++ KRA
Sbjct: 435  DPPDGVEIIWCTHNGNQRCGYYELGGDYVAVSNLTLRKRVVDQKAQTSPEQLGCYSSKRA 494

Query: 488  RLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSLS 547
            RL  L+++ T  N     N++  P +T    A+ +  CTR+LS +K+NL+  +EG S  S
Sbjct: 495  RLIFLNEQATGLN-----NQVEKPIATCSKTAMSVFPCTRNLSRIKKNLVFKFEGESGFS 554

Query: 548  RHLNTGKKSTRTRTRKLAAG----AKRAGVSNGFTNNYEVSETTTADKFEYKDTWVQCDA 607
              +  GK S+R +      G      +A +S   + N +         +EY DTWVQCDA
Sbjct: 555  TEMKVGKNSSRVKHASYGLGHVSCENQADISREHSKNSKSCGKVMTGHYEYSDTWVQCDA 614

Query: 608  CHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGGE 667
            CHKWRKL E+ I+  + AWFCSMNTDP  QSCSVPEES++   PIT + GFYSK  SGGE
Sbjct: 615  CHKWRKLQESWISGVTAAWFCSMNTDPQCQSCSVPEESWNDSGPITYLRGFYSKGKSGGE 674

Query: 668  EKNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSDV 727
            E+NISFF SVLKE+ +LINS TK+AL+WL  L+ +K+SEMET GLR P++++ + PG D 
Sbjct: 675  EQNISFFASVLKEHHSLINSATKKALSWLIKLSSDKLSEMETIGLRGPLISTCIDPGDDP 734

Query: 728  CGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATLI 787
             GFH++F++FGL + +EKG +RWYYP  LHNL FDVAAL+ AL EPLDS+RLYLS+ATL+
Sbjct: 735  LGFHRIFQSFGLRKGVEKGIVRWYYPKKLHNLVFDVAALRIALCEPLDSIRLYLSKATLV 794

Query: 788  IVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPR 847
            +VP+ LVDHWKTQIQKH+  GQL VY+WTDHRKPSAH LAWDYDV+ITTFSRLSAEW  R
Sbjct: 795  VVPATLVDHWKTQIQKHVSSGQLRVYIWTDHRKPSAHSLAWDYDVVITTFSRLSAEWSSR 854

Query: 848  KRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLSH 907
            K+S LMQVHW RV+LDEGHTLGSS+ LTNKLQMAVSL++SNRWILTGTPTP+TPNSQLSH
Sbjct: 855  KKSALMQVHWLRVMLDEGHTLGSSVGLTNKLQMAVSLMASNRWILTGTPTPNTPNSQLSH 914

Query: 908  LQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIPP 967
            LQPLL+FLHEEAYG N KSWEAGILRPFEAEMEEGR  LL LL RCMISARK DL +IPP
Sbjct: 915  LQPLLKFLHEEAYGLNQKSWEAGILRPFEAEMEEGRSRLLHLLHRCMISARKIDLKNIPP 974

Query: 968  CIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNIR 1027
            CIKKV  L+FT+EHARSYNEL VTVRRNILMADWND SH+ESLLNPKQWK RSTTIKNIR
Sbjct: 975  CIKKVTLLDFTDEHARSYNELAVTVRRNILMADWNDHSHVESLLNPKQWKFRSTTIKNIR 1034

Query: 1028 LSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNLLYGGNCARCGEWCRLP 1087
            LSCCVAGHIKV +AG+DIQETMD LV++GLDP S+EY+FIKYNLL GGNC RCGEWCRLP
Sbjct: 1035 LSCCVAGHIKVTDAGQDIQETMDALVENGLDPTSEEYAFIKYNLLDGGNCVRCGEWCRLP 1094

Query: 1088 VIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQPS 1147
            VI PCRHLLCLDCVALD E CT+PGCG LY MQTP+T+ARPENPNPKWPVPKDLIELQPS
Sbjct: 1095 VITPCRHLLCLDCVALDSERCTYPGCGNLYEMQTPDTLARPENPNPKWPVPKDLIELQPS 1154

Query: 1148 YKQ----------DNWDPDWQSTSSSKVAYLIQRL------------------------- 1207
            YKQ          DNWDPDWQSTSSSKVAYLI  L                         
Sbjct: 1155 YKQARVAYTLCIPDNWDPDWQSTSSSKVAYLIHSLKELQDANNEVQPPKDDGTDVKNIQG 1214

Query: 1208 ---------KALSEANDEAALFPP----PSLTKSDLTIAGIRFAGMYSPMHASNKMKSLA 1267
                       ++   D+  +F        + +  LTIAGI+FAGMYSPMH+SNKMKSL 
Sbjct: 1215 LLCQSWTRNSNINTHKDKFLVFSQFLEHIHVIEQQLTIAGIKFAGMYSPMHSSNKMKSLT 1274

Query: 1268 TFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVE 1327
            TFQ+D +CMVLLMDGSAALGLDLSFV++VFLMEPIWDKSMEEQVISRAHRMGATRPI+VE
Sbjct: 1275 TFQNDETCMVLLMDGSAALGLDLSFVSHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVE 1334

Query: 1328 TLVMHETIEEQMVQFLQDTDECKRLMKEEFSKPDYEGPRAHRSMHDFAGSNYLSQLKFVR 1337
            TL M  TIEEQMV FLQD  E +RL+K+EF K + EG R HRS+HDFA +NYLSQL+FVR
Sbjct: 1335 TLAMRSTIEEQMVAFLQDATERRRLLKKEFGKTNSEGARTHRSLHDFAVNNYLSQLRFVR 1363

[Close]

BLAST of Cp4.1LG01g14940 vs. TrEMBL
Match: A0A0B0PRQ1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_07457 PE=4 SV=1)

HSP 1 Score: 1600.5 bits (4143), Expect = 0.0e+00
Identity = 812/1342 (60.51%), Postives = 973/1342 (72.50%), Query Frame = 1


Query: 66   PLSKAGVSP----------QDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKR 125
            PLS A  +P           D+  C     G   S + N    +    +A   R  G+K 
Sbjct: 24   PLSIASTAPFSGPCHLTTADDNGVCFRCQNGVVLSAIRNA--AVSGPDNAENSRKRGRKN 83

Query: 126  TNRMGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSG 185
               +G+V+GS+SVV+QIHALV HKCLKI A+V+ V+    EEARAV+LVDV+LPV+LWSG
Sbjct: 84   ---IGMVNGSISVVNQIHALVAHKCLKIQARVLSVEES-GEEARAVVLVDVYLPVDLWSG 143

Query: 186  WQFPRSKTVAGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLV-GKDHSQVADMVRKSV 245
            WQFPRS +VAG+LFRH+                C+W+ER+ +L  G +     ++  +S+
Sbjct: 144  WQFPRSASVAGSLFRHI---------------SCDWKERNLMLTNGTEIGNHGNL--RSI 203

Query: 246  WNPAECHVHNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGI 305
            W+  +CHV  CKLH +      +RLFELH+IF+SLPS+  +     +R+QP DD   SGI
Sbjct: 204  WSVFDCHVLGCKLHCNGVDPLKKRLFELHDIFKSLPSVTNNEITHSSRVQPADDILNSGI 263

Query: 306  WDISDDVLINIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRE 365
            WD++DD+LIN++ AL P DL RVA+TC HLRSL+A IMPCMKLKL+PHQQAAVEWML RE
Sbjct: 264  WDLTDDILINVLAALGPKDLTRVAATCQHLRSLAALIMPCMKLKLFPHQQAAVEWMLRRE 323

Query: 366  RNAEVFYHPLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITAL 425
            RNA+V  HPLY+ FSTEDGF F+IN+V G IVT   P I DFRGG+FCDEPGLGKTIT+L
Sbjct: 324  RNADVLRHPLYMEFSTEDGFPFYINSVVGSIVTGTAPTIRDFRGGMFCDEPGLGKTITSL 383

Query: 426  SLILKTQGTLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKG- 485
            SLILKTQGT+A+PP GVQI+WCTHNGN KCGYYE+  +  +  N    K     + L+G 
Sbjct: 384  SLILKTQGTMADPPDGVQIIWCTHNGNDKCGYYELRGDKVSCNNMTSGKRTTSLNVLRGQ 443

Query: 486  --------MEDLTYHTPKRARLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTR 545
                    MED+ Y  PKR RL +  +R    +DSC+   +ISPS   Y      VR +R
Sbjct: 444  SSLGKLCLMEDINYPLPKRPRLMSPGERSAEFDDSCSSGRIISPSVPHYEPLTWAVRSSR 503

Query: 546  SLSSVKRNLLLTYEGASSLSRHLNTGKKSTRTRTRKLAAGAKRAGVSNGFTNNYEVSETT 605
            +L+ +++NLL  Y+G S   +     K        +     K   +S G  +    +   
Sbjct: 504  NLAHIRKNLLYAYDGLSGSCKGKTIEKDMPIRNGSRHVYRGKPVDLSFGVLDGCMRAGKG 563

Query: 606  TADKFEYKDTWVQCDACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRP 665
             A +    +TWVQCD+CHKWRKL  + + DA  AWFCSMNTDP  QSC+ PEE++DK   
Sbjct: 564  NAGRAMCTETWVQCDSCHKWRKLVGSGLTDAKVAWFCSMNTDPARQSCTDPEEAWDKHES 623

Query: 666  ITNIPGFYSKDTSGGEEKNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTG 725
            IT +PGF++K T+GG+E+N+SFF SVLKE+  +INS TK+AL WL+ L+PE++SEMET G
Sbjct: 624  ITYLPGFFTKGTAGGKEENVSFFMSVLKEHHDVINSKTKKALLWLAKLSPERLSEMETVG 683

Query: 726  LRSPILASYVVPGSDVCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALT 785
            L SPIL S VV   D  GFHK+F+AFGL+++ EKG IRWYYP  L NLAFD+ AL+ AL 
Sbjct: 684  LSSPILGSGVV--GDALGFHKIFQAFGLIKREEKGIIRWYYPRTLENLAFDLGALRLALC 743

Query: 786  EPLDSVRLYLSRATLIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYD 845
            EPLDSVRLYLSRATL++VPSNLVDHWKTQIQKH+R GQL +YVWTDHRKP  H LAWDYD
Sbjct: 744  EPLDSVRLYLSRATLVVVPSNLVDHWKTQIQKHVRLGQLQLYVWTDHRKPPVHNLAWDYD 803

Query: 846  VIITTFSRLSAEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWI 905
            ++ITTF+RLSAEWGPRKRS LMQVHW RVILDEGHTLGSSLNLTNKLQMA+SL +S+RW+
Sbjct: 804  IVITTFNRLSAEWGPRKRSALMQVHWFRVILDEGHTLGSSLNLTNKLQMAISLTASSRWL 863

Query: 906  LTGTPTPSTPNSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLR 965
            LTGTPT +TPNSQLSHLQPLL+FLHEEAYGQN KSWEAGIL+PFEA+MEEGR  LL LLR
Sbjct: 864  LTGTPTRNTPNSQLSHLQPLLKFLHEEAYGQNQKSWEAGILKPFEAKMEEGRSRLLQLLR 923

Query: 966  RCMISARKTDLLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLL 1025
            RCMISARK DL +IPPCIKKV ++NFT+EHARSYNELVVTVRRNILMADWNDPSH+ESLL
Sbjct: 924  RCMISARKIDLQNIPPCIKKVTFVNFTDEHARSYNELVVTVRRNILMADWNDPSHVESLL 983

Query: 1026 NPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNL 1085
            NPKQWK RSTTI+N+RLSCCVAGHIKV EAGEDIQETMDILV++GLDP+S+EY+FIKYNL
Sbjct: 984  NPKQWKFRSTTIRNVRLSCCVAGHIKVTEAGEDIQETMDILVENGLDPLSEEYAFIKYNL 1043

Query: 1086 LYGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENP 1145
            LYGGNC RC EWCRLP++ PCRHLLCLDCV LD + CT PGCG LY MQTPET+ARPENP
Sbjct: 1044 LYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPETLARPENP 1103

Query: 1146 NPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVA------------------------- 1205
            NPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKVA                         
Sbjct: 1104 NPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLMERLKALQEVNKEVRCSMDEDDE 1163

Query: 1206 -YLIQRLKALSE---------------ANDEAALFPPPSLTKSD-----------LTIAG 1265
               I +    S+                N+   + P   L  S            LT AG
Sbjct: 1164 AKHIDKFLCPSQRSDMGVPLLLNHSRLGNESCKMLPEKVLIFSQFLEHIHVIEQQLTFAG 1223

Query: 1266 IRFAGMYSPMHASNKMKSLATFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDKSM 1325
            I+FAGMYSPMH+ NKMKSLA FQ+D SCM LLMDGSAALGLDLSFVT+VFLMEPIWD+SM
Sbjct: 1224 IKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSM 1283

Query: 1326 EEQVISRAHRMGATRPIHVETLVMHETIEEQMVQFLQDTDECKRLMKEEFSKPDYEGPRA 1336
            EEQVISRAHRMGATRPIHVETL M  TIEEQM++FLQD D C++ +KEE  +  +EG R 
Sbjct: 1284 EEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQRSGHEGSRP 1340

[Close]

BLAST of Cp4.1LG01g14940 vs. TrEMBL
Match: A0A0D2VUD8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017400 PE=4 SV=1)

HSP 1 Score: 1592.8 bits (4123), Expect = 0.0e+00
Identity = 795/1290 (61.63%), Postives = 956/1290 (74.11%), Query Frame = 1


Query: 109  RTSGKKRTNRMGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHL 168
            + S K+    +G+V+GS+SVV+QIHALV HKCLKI A+V+ V+    EEARAV+LVDV+L
Sbjct: 72   KNSRKRGRKNIGMVNGSISVVNQIHALVAHKCLKIQARVLSVEES-GEEARAVVLVDVYL 131

Query: 169  PVELWSGWQFPRSKTVAGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLV-GKDHSQVA 228
            PV+LWSGWQFPRS +VAG+LFRH+                C+W+ER+ +L  G +  + A
Sbjct: 132  PVDLWSGWQFPRSASVAGSLFRHI---------------SCDWKERNLMLTNGTEIGKDA 191

Query: 229  DMVRKSVWNPAECHVHNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPED 288
                +S+W+  +CHV  CKLH +      +RLFELH+IF+SLPS+  +     +R+QP D
Sbjct: 192  HGNLRSIWSVFDCHVLGCKLHCNGVDPLKKRLFELHDIFKSLPSVTNNEMAHSSRVQPTD 251

Query: 289  DYSQSGIWDISDDVLINIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAV 348
            D   SGIWD++DD+LI ++ AL P DL RVA+TC HLRSL+A IMPCMKLKL+PHQQAAV
Sbjct: 252  DILNSGIWDLTDDILIYVLAALGPKDLTRVAATCRHLRSLAALIMPCMKLKLFPHQQAAV 311

Query: 349  EWMLHRERNAEVFYHPLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGL 408
            EWML RERNA+V  HPLY+ FSTEDGF F++N+V G IVT   P I DFRGG+FCDEPGL
Sbjct: 312  EWMLRRERNADVLRHPLYMEFSTEDGFPFYVNSVVGSIVTGTAPTIRDFRGGMFCDEPGL 371

Query: 409  GKTITALSLILKTQGTLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVG 468
            GKTIT+LSLILKTQGT+A+PP GVQI+WCTHNGN KCGYYE+  +  T  N    K    
Sbjct: 372  GKTITSLSLILKTQGTVADPPDGVQIIWCTHNGNDKCGYYELRGDKITCNNMTSGKRTTS 431

Query: 469  CSSLKG---------MEDLTYHTPKRARLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAV 528
             + L+G         MED+ Y  PKR RLT+  +R    +DSC+   + SPS+T      
Sbjct: 432  LNVLRGQSSLGKLCLMEDINYPLPKRHRLTSPGERSAEFDDSCSSGRIKSPSATHSEPVT 491

Query: 529  QMVRCTRSLSSVKRNLLLTYEGAS-SLSRHLNTGKKSTRTRTRKLAAGAKRAGVSNGFTN 588
              VR +R+L+ +++NLL  Y+G S S            R  +R +  G K   +S G  +
Sbjct: 492  WAVRSSRNLAHIRKNLLYAYDGLSGSCKGKTIETNMPIRNGSRHVYRG-KPVDLSFGVLD 551

Query: 589  NYEVSETTTADKFEYKDTWVQCDACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPE 648
                +    A +    +TWVQCD+C+KWRKL  + + DA  AWFCSMNTDP  QSC+ PE
Sbjct: 552  GCMRAGKGNAGRAMCTETWVQCDSCYKWRKLVGSGLTDAKVAWFCSMNTDPARQSCTDPE 611

Query: 649  ESYDKCRPITNIPGFYSKDTSGGEEKNISFFTSVLKENMALINSGTKRALTWLSNLAPEK 708
            E++D    IT +PGF++K T+GG+E+N+SFF SVLK++  +INS TK+AL WL+ L+PE+
Sbjct: 612  EAWDNHESITYLPGFFTKGTAGGKEENVSFFMSVLKDHHDVINSKTKKALLWLAKLSPER 671

Query: 709  ISEMETTGLRSPILASYVVPGSDVCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDV 768
            +SEMET GL SPIL S V    D  GFHK+F+AFGL+++ EKG  RWYYP  L NLAFD+
Sbjct: 672  LSEMETVGLSSPILGSGVA--GDALGFHKIFQAFGLIKRAEKGISRWYYPRTLENLAFDL 731

Query: 769  AALKTALTEPLDSVRLYLSRATLIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSA 828
            AAL+ AL EPL+SVRLYLSRATL++VPSNLVDHWKTQIQKH+RPGQL +YVW DHRKP  
Sbjct: 732  AALRLALCEPLNSVRLYLSRATLVVVPSNLVDHWKTQIQKHVRPGQLQLYVWIDHRKPPV 791

Query: 829  HCLAWDYDVIITTFSRLSAEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVS 888
            H LAWDYD++ITTF+RLSAEWGPRKRS LMQVHW RVILDEGHTLGSSLNLTNKLQMA+S
Sbjct: 792  HNLAWDYDIVITTFNRLSAEWGPRKRSALMQVHWFRVILDEGHTLGSSLNLTNKLQMAIS 851

Query: 889  LISSNRWILTGTPTPSTPNSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGR 948
            L +S+RW+LTGTPT +TPNSQLSHLQPLL+FLHEEAYGQN KSWEAGIL+PFEA+MEEGR
Sbjct: 852  LTASSRWLLTGTPTRNTPNSQLSHLQPLLKFLHEEAYGQNQKSWEAGILKPFEAKMEEGR 911

Query: 949  LLLLDLLRRCMISARKTDLLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWND 1008
              LL LLRRCMISARK DL +IPPCIKKV ++NFT+EHARSYNELVVTVRRNILMADWND
Sbjct: 912  SRLLQLLRRCMISARKIDLQNIPPCIKKVTFVNFTDEHARSYNELVVTVRRNILMADWND 971

Query: 1009 PSHIESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQE 1068
            PSH+ESLLNPKQWK RSTTI+N+RLSCCVAG IKV EAGEDIQETMDILV+ GLDP+S+E
Sbjct: 972  PSHVESLLNPKQWKFRSTTIRNVRLSCCVAGQIKVTEAGEDIQETMDILVETGLDPLSEE 1031

Query: 1069 YSFIKYNLLYGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPE 1128
            Y+FIKYNLLYGGNC RC EWCRLP++ PCRHLLCLDCV LD + CT PGCG LY MQTPE
Sbjct: 1032 YAFIKYNLLYGGNCQRCNEWCRLPIVTPCRHLLCLDCVGLDSKMCTLPGCGHLYEMQTPE 1091

Query: 1129 TIARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAY---------------- 1188
            T+ARPENPNPKWPVPKDLIELQPSYKQD+W+PDWQSTSSSKVAY                
Sbjct: 1092 TLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVAYLVERLKALQEVNKEVR 1151

Query: 1189 ------------------------LIQRLKALSEANDEAALFPPPSLT------------ 1248
                                     +  L  LS   +E+    P  +             
Sbjct: 1152 CSMDEDDKAKHIDKFLCPSQRSDMGVPLLLNLSRLGNESCNMLPEKVLIFSQFLEHIHVI 1211

Query: 1249 KSDLTIAGIRFAGMYSPMHASNKMKSLATFQHDASCMVLLMDGSAALGLDLSFVTYVFLM 1308
            +  LT AGI+FAGMYSPMH+ NKMKSLA FQ+D SCM LLMDGSAALGLDLSFVT+VFLM
Sbjct: 1212 EQQLTFAGIKFAGMYSPMHSGNKMKSLAMFQYDDSCMALLMDGSAALGLDLSFVTHVFLM 1271

Query: 1309 EPIWDKSMEEQVISRAHRMGATRPIHVETLVMHETIEEQMVQFLQDTDECKRLMKEEFSK 1336
            EPIWD+SMEEQVISRAHRMGATRPIHVETL M  TIEEQM++FLQD D C++ +KEE  +
Sbjct: 1272 EPIWDRSMEEQVISRAHRMGATRPIHVETLAMRGTIEEQMMEFLQDADACRKFLKEESQR 1331

[Close]

BLAST of Cp4.1LG01g14940 vs. TAIR10
Match: AT3G54460.1 (AT3G54460.1 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein)

HSP 1 Score: 1377.1 bits (3563), Expect = 0.0e+00
Identity = 734/1416 (51.84%), Postives = 932/1416 (65.82%), Query Frame = 1


Query: 8    DYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLT---PIEANP 67
            D+KLCGFLC VL+V SP     D L+ G+ C++  + S   F SE G++L+   PI    
Sbjct: 4    DHKLCGFLCTVLSVDSP-----DLLQSGSSCFIFNDGSVTGFKSENGLILSLTNPISNLQ 63

Query: 68   KPLSKAG---------------VSPQDSEQCRGTVGGEGTSTVENGDLTLKRKM--SARG 127
              +S  G                +PQ   +C      EG S+ +      KR++   ++ 
Sbjct: 64   SLISSKGDHDVENSGTIEDGRLETPQKRRKCV-----EGESSGKRKTPKSKRRVLSGSKE 123

Query: 128  RRTSGKKRTNRMGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVH 187
            +   G+KR   +G+V+GS+SVV Q+HALV +KCLKI  +V+ VD G + E RAV+LVDV+
Sbjct: 124  KTVQGRKRVKSIGMVNGSISVVQQLHALVANKCLKIICRVVKVDKGENGEERAVVLVDVY 183

Query: 188  LPVELWSGWQFPRSKTVAGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVA 247
            LP+ELWSGWQFP+S+  A ALF+HL                C+W  R S+L GK   + A
Sbjct: 184  LPIELWSGWQFPKSQATAAALFKHL---------------SCDWGLRVSILDGKSIWEEA 243

Query: 248  DMVRKSVWNPAECHVHNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPED 307
            +   K++W+ ++CHV +CKL  +   S  RRLF+LHEIF+SLPS         +R+ P  
Sbjct: 244  NGRIKAIWDLSDCHVFDCKLLCNAPNSPKRRLFKLHEIFKSLPSPGNHDVSYSSRVLPST 303

Query: 308  DYSQSGIWDISDDVLINIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAV 367
            D   SG+WD+SDDVLI+I+  L   DL  +A+ C   RSL++ I+PCM LKL+PHQQAAV
Sbjct: 304  DSCVSGVWDLSDDVLISILMKLDTKDLFSIAAVCRLFRSLTSLIVPCMNLKLFPHQQAAV 363

Query: 368  EWMLHRERNAEVFYHPLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGL 427
             WML RER AEV  HPLY+ F TEDGFSF++N VTG+I+T   P + DFRGG+FCDEPGL
Sbjct: 364  GWMLERERKAEVSSHPLYLSFDTEDGFSFYVNAVTGDIITEAAPMVKDFRGGMFCDEPGL 423

Query: 428  GKTITALSLILKTQGTLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVG 487
            GKTITALSLILKTQGT+A+PP G+ IVWCTH  ++KC YYE +S+  TS +   VK    
Sbjct: 424  GKTITALSLILKTQGTMADPPEGLPIVWCTHKSDKKCAYYEYTSDQFTSNSMSAVKRFQS 483

Query: 488  CSSLKGMEDLTYHTP---------KRARLTTLDDRHTVTNDSCAGNEMIS--PSSTDYAK 547
             SS +         P         K+ARL   DD+   + +S   NE  +  P+S D   
Sbjct: 484  PSSCRNQVSFEAFRPLLESKSLPFKQARLMDPDDQTLESKNSNFENEFETHIPASLDLK- 543

Query: 548  AVQMVRCTRSLSSVKRNLLLTYEGASSLSRHLNTGKKSTRTRTRKLAAGAKRAGVSNGFT 607
                 +C +SL +V++NLL  Y GAS LS  +   K+ +  +   +  G KR G+++   
Sbjct: 544  ----AQCRKSLGNVRKNLLPAYNGASELSEVMEA-KRISNWKKCGMITGCKRKGLTDSDV 603

Query: 608  NNYEVSETTTADKFEYKDTWVQCDACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVP 667
             +               D W+QCD+C KWR++ +  ++   +AWFCS N DP YQSC+ P
Sbjct: 604  ES---------------DIWMQCDSCSKWRRIIDEGVSVTGSAWFCSNNNDPAYQSCNDP 663

Query: 668  EESYDKCRPITNIPGFYSKDTSGGEEKNISFFTSVLKENMALINSGTKRALTWLSNLAPE 727
            EE +DK +PI  + GFY+K  SG E  NISFFTSVL+E+ + ++S  K+AL WL+ L  E
Sbjct: 664  EELWDKSQPIKYLQGFYTKGASGEESDNISFFTSVLREHKSSVSSTVKKALIWLAKLPLE 723

Query: 728  KISEMETTGLRSPILASYVVPGSDVCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFD 787
            K+S+MET GL  P+L   +    D  GF ++F AFGL  ++EKG  +W+YP  L NL FD
Sbjct: 724  KLSQMETVGLPGPVLGLKL----DALGFQRIFRAFGLKSRVEKGVTKWFYPKFLENLVFD 783

Query: 788  VAALKTALTEPLDSVRLYLSRATLIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPS 847
            V ALK AL +PLD+ RLYLS+ATLI+VP+NLV+HW TQIQKH+   QL + VW DH + S
Sbjct: 784  VPALKVALCQPLDTFRLYLSKATLIVVPTNLVNHWLTQIQKHVCSDQLRILVWADHIELS 843

Query: 848  AHCLAWDYDVIITTFSRLSAEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAV 907
             H LAWDYDV+ITTFSRLSAEW PRK+S L+QVHW RV+LDEGHTLGSS++LTNK QMAV
Sbjct: 844  PHSLAWDYDVVITTFSRLSAEWNPRKKSPLIQVHWLRVMLDEGHTLGSSVSLTNKFQMAV 903

Query: 908  SLISSNRWILTGTPTPSTPNSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEG 967
            SL + NRW+LTGTPTP+TPNSQLSH+QPLL+FLHEE YG+N K WEAGILRPFEAEMEEG
Sbjct: 904  SLTACNRWLLTGTPTPNTPNSQLSHIQPLLKFLHEEVYGENPKFWEAGILRPFEAEMEEG 963

Query: 968  RLLLLDLLRRCMISARKTDLLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWN 1027
            RL LL LL+RCMIS+RK DL  IPPCIKKV YLNF   HARSYNELV TVRRNIL+ADWN
Sbjct: 964  RLRLLQLLQRCMISSRKKDLQMIPPCIKKVTYLNFLPGHARSYNELVETVRRNILLADWN 1023

Query: 1028 DPSHIESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQ 1087
            DPSH+ESLLN KQWK RS TI N+RLSCCVAGHIK+ +AG DI+ETMD L+++ LD  ++
Sbjct: 1024 DPSHVESLLNSKQWKFRSITISNVRLSCCVAGHIKMTDAGHDIKETMDALLENDLDLWTE 1083

Query: 1088 EYSFIKYNLLYGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTP 1147
            EYSFI+ +L+ G NC RCGEWCRLPVI PCRHLLCLDCVALD E CT  GCG LY MQTP
Sbjct: 1084 EYSFIQDSLIGGCNCKRCGEWCRLPVITPCRHLLCLDCVALDSERCTISGCGYLYEMQTP 1143

Query: 1148 ETIARPENPNPKWPVPK-------------------------------DLIELQPSYKQ- 1207
            ET+ARPENPNPKWPVPK                                L +L    K+ 
Sbjct: 1144 ETLARPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVSYLVDRLRKLHEGNKKS 1203

Query: 1208 ---------DNWDPDWQSTSSSKVAYLIQRLKALSEAN--DEAALFPP----PSLTKSDL 1267
                     DN + +   TS + +   +      S+    D+  +F        + +  L
Sbjct: 1204 ILSFNKTDNDNLEDNPPGTSEAFLGKELHGQDCGSQMVFVDKVLIFSQFLEHIHVIEQQL 1263

Query: 1268 TIAGIRFAGMYSPMHASNKMKSLATFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIW 1327
            T AGI+F  MYSPM + NKMK+LA FQ+DA CM LLMDGS ALGLDLSFVT+VFLMEPIW
Sbjct: 1264 TTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMDGSGALGLDLSFVTHVFLMEPIW 1323

Query: 1328 DKSMEEQVISRAHRMGATRPIHVETLVMHETIEEQMVQFLQDTDECKRLMKEEFSKPDYE 1346
            DKS+EEQVISRAHRMGA RPI VETL M  TIEEQM++FL+D ++  RL+  ++ +   E
Sbjct: 1324 DKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRFLEDAEKSDRLLSGDYIEAKQE 1369

[Close]

BLAST of Cp4.1LG01g14940 vs. TAIR10
Match: AT5G22750.1 (AT5G22750.1 DNA/RNA helicase protein)

HSP 1 Score: 166.8 bits (421), Expect = 9.3e-41
Identity = 146/547 (26.69%), Postives = 234/547 (42.78%), Query Frame = 1


Query: 780  LIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWG 839
            LI+ P  L+  WKT+I+ H +PG L VYV     +P    L    DV+ITT+  L++E+ 
Sbjct: 493  LIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVITTYGVLTSEFS 552

Query: 840  PRKRSI---LMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPN 899
                +    +  V W R++LDE HT+ +S +  +    A +L++  RW LTGTP      
Sbjct: 553  QENSADHEGIYAVRWFRIVLDEAHTIKNSKSQIS--LAAAALVADRRWCLTGTPI----Q 612

Query: 900  SQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTD- 959
            + L  L  LLRFL  E +G     W   + +PFE   E G  L+  +L+  M+   K+  
Sbjct: 613  NNLEDLYSLLRFLRIEPWG-TWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSST 672

Query: 960  ------LLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMAD---------WNDPSH 1019
                  +L +PP   +V Y   +E     Y+ L    +R+ +  D          N  S 
Sbjct: 673  DREGRPILVLPPADARVIYCELSESERDFYDAL---FKRSKVKFDQFVEQGKVLHNYASI 732

Query: 1020 IESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDI--------------L 1079
            +E LL  +Q              CC   H  +  +  D  E  D+              L
Sbjct: 733  LELLLRLRQ--------------CC--DHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGL 792

Query: 1080 VDDGLDPMSQEY-SFIKYNLLYG--GNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCT 1139
              +G D  S+ +   +   L  G  G C  C E     V+ PC H LC +C+       T
Sbjct: 793  EREGKDVPSEAFVQEVVEELRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNST 852

Query: 1140 FPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLI 1199
               C                 P  +  V K  +   P+  +   D +     SSK+  L+
Sbjct: 853  SGLC-----------------PVCRNTVSKQELITAPTESRFQVDVEKNWVESSKITALL 912

Query: 1200 QRLKALSEANDEAALFPP----PSLTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQHDA 1259
            + L+ L  +  ++ LF        L +  L+     F  +   +    + K L  F  D 
Sbjct: 913  EELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDG 972

Query: 1260 SCMVLLMDGSA-ALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMH 1286
            S +VLLM   A  +G++L+  +  F+M+P W+ ++EEQ + R HR+G T+ + +   ++ 
Sbjct: 973  SILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVK 996

[Close]

BLAST of Cp4.1LG01g14940 vs. TAIR10
Match: AT5G43530.1 (AT5G43530.1 Helicase protein with RING/U-box domain)

HSP 1 Score: 144.4 bits (363), Expect = 5.0e-34
Identity = 152/551 (27.59%), Postives = 237/551 (43.01%), Query Frame = 1


Query: 779  TLIIVPSNLVDHWKTQIQKHIRPG--QLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSA 838
            TLII P  L+  WK +++ H +P    +LVY   D R   A  +A  +DV++TT+  L++
Sbjct: 743  TLIICPMALLSQWKDELETHSKPDTVSVLVYYGGD-RTHDAKAIA-SHDVVLTTYGVLTS 802

Query: 839  EWGP-RKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTP 898
             +      SI  ++ W+R++LDE HT+ S    T   +    L S  RW LTGTP     
Sbjct: 803  AYKQDMANSIFHRIDWYRIVLDEAHTIKSWK--TQAAKATFELSSHCRWCLTGTPL---- 862

Query: 899  NSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTD 958
             ++L  L  LL FLH E +  N   W   I +P+E     G  L+  +LR  M+   K  
Sbjct: 863  QNKLEDLYSLLCFLHVEPWC-NWAWWSKLIQKPYENGDPRGLKLIKAILRPLMLRRTKET 922

Query: 959  -------LLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADW---------NDPS 1018
                   +L +PP   +V     +E     Y  L    +R+ +  D          N  +
Sbjct: 923  RDKEGSLILELPPTDVQVIECEQSEAERDFYTALF---KRSKVQFDQFVAQGKVLHNYAN 982

Query: 1019 HIESLLNPKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDIL----VDDGLDPMS 1078
             +E LL  +Q              CC    + ++ A       +D L    +D+  D +S
Sbjct: 983  ILELLLRLRQ--------------CCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVS 1042

Query: 1079 QEYSFIKY-----NLLYGGN---CARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGC 1138
            Q      Y       L  GN   C  C E    PV+ PC H +C +C+         P C
Sbjct: 1043 QNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRS---PSC 1102

Query: 1139 GKLYVMQT----PETIARPENPNPKWPVPKDLIELQPSYKQDNWDPDWQSTSSSKVAYLI 1198
            G   + +T     E I+ P +   +  V K            NW        SSKV+ L+
Sbjct: 1103 GLCPICRTILKRTELISCPTDSIFRVDVVK------------NWK------ESSKVSELL 1162

Query: 1199 QRLKAL--SEANDEAALFPPPS----LTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQH 1258
            + L+ +  S + +++ +F   +    L +  L   G  F      +    + K L  F  
Sbjct: 1163 KCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNE 1222

Query: 1259 DASCMVLLMDGSAA-LGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLV 1288
                 +LLM   A  +GL+L+  + VFLM+P W+ ++EEQ I R HR+G  R + V   +
Sbjct: 1223 TKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFI 1246

[Close]

BLAST of Cp4.1LG01g14940 vs. TAIR10
Match: AT5G05130.1 (AT5G05130.1 DNA/RNA helicase protein)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-24
Identity = 123/552 (22.28%), Postives = 247/552 (44.75%), Query Frame = 1


Query: 777  RATLIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSA 836
            + TLI+ P +++  W TQ+++H  PG L VY++    +         YD+++TT+  L+ 
Sbjct: 339  KTTLIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKYDIVLTTYGTLAV 398

Query: 837  E--WGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPST 896
            E  W   + S + ++ W R+ILDE HT+ ++     + ++   L +S RW +TGTP    
Sbjct: 399  EESW---EDSPVKKMEWLRIILDEAHTIKNA--NAQQSRVVCKLKASRRWAVTGTPI--- 458

Query: 897  PNSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKT 956
              +    L  L+ FL  E +      W++ I RP     ++G   L  L+    IS R+T
Sbjct: 459  -QNGSFDLYSLMAFLRFEPFSIK-SYWQSLIQRPLGQGNKKGLSRLQVLM--ATISLRRT 518

Query: 957  ---DLLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWK 1016
                L+ +PP   +  Y+  + E  + Y+ +           +      +++L+N     
Sbjct: 519  KEKSLIGLPPKTVETCYVELSPEERQLYDHM-----------EGEAKGVVQNLINNGSLM 578

Query: 1017 SRSTTIKNIRLSCCVAGHIKVAEAGEDIQ----ETMDILVDDGLDPMSQEYSFIKYNLLY 1076
               +T+ +I L        ++ +  +D+     E         ++ ++ +   ++  +  
Sbjct: 579  RNYSTVLSIIL--------RLRQLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKLVA- 638

Query: 1077 GGNCARCGEWCRLPV-IAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPN 1136
                 + GE    P+ I+P  +++   C  + C  C         ++QT +  ++P  P 
Sbjct: 639  ---ALQDGEDFDCPICISPPTNIIITRCAHIFCRAC---------ILQTLQR-SKPLCPL 698

Query: 1137 PKWPVPKDLIELQPSYKQDNWDPDWQ----STSSSKVAYLIQRLKALSE--ANDEAALFP 1196
             +  + +  +   P    D+ + D +    ST SSKV+ L+  L A  +   N ++ +F 
Sbjct: 699  CRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVFS 758

Query: 1197 P----PSLTKSDLTIAGIRFAGMYSPMHASNKMKSLATFQHD--ASCMVLLMDGSAA-LG 1256
                   L ++ L  AG     +   M    + + +  F +      +VLL    A+  G
Sbjct: 759  QFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTG 818

Query: 1257 LDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMHETIEEQMVQFLQDTD 1306
            ++L+  + V+L +P W+ ++EEQ + R HR+G  + + +  ++   +IEE++++  Q   
Sbjct: 819  INLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQ--- 842

[Close]

BLAST of Cp4.1LG01g14940 vs. TAIR10
Match: AT2G28290.1 (AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 63.9 bits (154), Expect = 8.5e-10
Identity = 61/240 (25.42%), Postives = 111/240 (46.25%), Query Frame = 1


Query: 732 GLVRKMEKGTIRWY---YPHNLHNLAFDVAALKTALTEPLDSVRLYLSRAT------LII 791
           G +R+ +   +RW    Y ++L+ +  D   L    T  + S+  YL          L++
Sbjct: 752 GKLREYQMNGLRWLVSLYNNHLNGILADEMGL--GKTVQVISLICYLMETKNDRGPFLVV 811

Query: 792 VPSNLVDHWKTQIQKHIRPGQLLVYVWT-DHRKP--SAHCLAWDYDVIITTFSRLSAEWG 851
           VPS+++  W+++I         +VY  T D R+       +   ++V++TT+  L  +  
Sbjct: 812 VPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNK-- 871

Query: 852 PRKRSILMQVHWHRVILDEGHTL-GSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQ 911
              R  L ++HWH +I+DEGH +  +S  L   L+     +SS+R +LTGTP      + 
Sbjct: 872 -HDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLK---HYVSSHRLLLTGTPL----QNN 931

Query: 912 LSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAE----------MEEGRLLLLDLLRRCM 949
           L  L  LL FL    +  + + +     +PF++            EE  LL+++ L + +
Sbjct: 932 LEELWALLNFLLPNIFNSS-EDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVL 978

[Close]

BLAST of Cp4.1LG01g14940 vs. NCBI nr
Match: gi|659092199|ref|XP_008446949.1| (PREDICTED: F-box protein At3g54460 [Cucumis melo])

HSP 1 Score: 2345.9 bits (6078), Expect = 0.0e+00
Identity = 1160/1382 (83.94%), Postives = 1224/1382 (88.57%), Query Frame = 1


Query: 5    DFSDYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLTPIEANP 64
            DFSD+KLCGFL VVLAV SP SE  + LRPGTRCYVS ESSDVCFTS+ GVVL+P+E NP
Sbjct: 6    DFSDFKLCGFLSVVLAVSSPQSEFLNLLRPGTRCYVSAESSDVCFTSQNGVVLSPLEENP 65

Query: 65   KPLSKAGVSPQDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHG 124
            K LSK G  PQDSEQCRG V GEG    E G LT KR +SA G R+S KKRTNRMGLVHG
Sbjct: 66   KSLSKPGALPQDSEQCRGAVNGEGIGAAEIGILTPKRGVSAGGSRSSRKKRTNRMGLVHG 125

Query: 125  SMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTV 184
            +MSVV+QIHALVVHKC+KIDAQV FVDI   +EARAVLLVDV+LPVELWSGWQFP+SKTV
Sbjct: 126  NMSVVYQIHALVVHKCMKIDAQVTFVDI---QEARAVLLVDVYLPVELWSGWQFPKSKTV 185

Query: 185  AGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHN 244
            A ALF+HL                CEWQERSS+LVGKDHSQ   MV KSV N AECHVHN
Sbjct: 186  AAALFKHL---------------SCEWQERSSILVGKDHSQDVHMVGKSVSNVAECHVHN 245

Query: 245  CKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLIN 304
            CKLHNS GGS NRRLFELHEIFRSLPSIL+S KPEYTR+QPEDDY+QSGIWDISDD+L N
Sbjct: 246  CKLHNSSGGSPNRRLFELHEIFRSLPSILKSSKPEYTRMQPEDDYAQSGIWDISDDILFN 305

Query: 305  IMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPL 364
            I+KALRPLDL+RVASTC HLRSL+A IMPCMKLKLYPHQQAAVEWMLHRER+AEVFYHPL
Sbjct: 306  ILKALRPLDLVRVASTCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAEVFYHPL 365

Query: 365  YVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTL 424
            + P STEDGFSFH+NTVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTL
Sbjct: 366  FAPSSTEDGFSFHVNTVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTL 425

Query: 425  AEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKR 484
            AEPPPGVQIVWCTHNGNRKCGYYEVSS SNT TN+ L+KEAV  +SLKG+EDLTY TPKR
Sbjct: 426  AEPPPGVQIVWCTHNGNRKCGYYEVSSTSNTITNHFLLKEAVEWNSLKGLEDLTYRTPKR 485

Query: 485  ARLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSL 544
            AR+TTLDDRHT TN SCAGNE+ SPSS DYAKAV MVRCTRSLSSVKRNLLL YEGASSL
Sbjct: 486  ARMTTLDDRHT-TNSSCAGNELRSPSSADYAKAVHMVRCTRSLSSVKRNLLLAYEGASSL 545

Query: 545  SRHLNTGKKSTRTRTRKLAAGAKRAGVS--NGFTNNYEVSETTTADKFEYKDTWVQCDAC 604
            S+ LN GKKSTRTRTRK   G K+ G S  NG TNNYE   TT ADKFEYKDTWVQCDAC
Sbjct: 546  SKELNDGKKSTRTRTRKFPVGEKKVGASPSNGSTNNYEALGTTNADKFEYKDTWVQCDAC 605

Query: 605  HKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGGEE 664
            HKWRKL+ETSIAD+  AWFCSM+T+PFYQSCSVPEESYDKCRPITN+ GFYSK+TSGGEE
Sbjct: 606  HKWRKLAETSIADSGAAWFCSMHTNPFYQSCSVPEESYDKCRPITNLLGFYSKETSGGEE 665

Query: 665  KNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSDVC 724
            KNISFFTSVLKEN ALINSGTKRALTWLS+L PEKISEME TGLRSPIL SY+VPG +V 
Sbjct: 666  KNISFFTSVLKENRALINSGTKRALTWLSSLMPEKISEMERTGLRSPILTSYIVPGGNVR 725

Query: 725  GFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATLII 784
            GFH++F+AFGLVRKMEKGT+RWYYP NLHNLAFDVAAL+ AL+EPLD VRLYLSRATLI+
Sbjct: 726  GFHQIFDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATLIV 785

Query: 785  VPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 844
            VPSNLVDHWKTQIQKH+RPGQL VYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK
Sbjct: 786  VPSNLVDHWKTQIQKHVRPGQLQVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 845

Query: 845  RSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLSHL 904
            RSILMQVHW+RVILDEGHTLGSSLNLTNKLQMAVSL+S+NRWILTGTPTP+TPNSQLSHL
Sbjct: 846  RSILMQVHWNRVILDEGHTLGSSLNLTNKLQMAVSLVSTNRWILTGTPTPNTPNSQLSHL 905

Query: 905  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIPPC 964
            QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLL+LLRRCMISARKTDLL+IPPC
Sbjct: 906  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKTDLLTIPPC 965

Query: 965  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNIRL 1024
            IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSH+ESLLNPKQWK R  TIKNIRL
Sbjct: 966  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRCATIKNIRL 1025

Query: 1025 SCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNLLYGGNCARCGEWCRLPV 1084
            SCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYS+IKYNLLYGG+C+RCGEWCRLPV
Sbjct: 1026 SCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYIKYNLLYGGSCSRCGEWCRLPV 1085

Query: 1085 IAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQPSY 1144
            IAPCRHLLCLDCVALD EGCTFPGCGKLYVMQTPET+ARPENPNPKWPVPKDLIELQPSY
Sbjct: 1086 IAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQPSY 1145

Query: 1145 KQDNWDPDWQSTSSSKVAYLIQRLKALSEANDEAALFPPPSLTKS--------------- 1204
            KQDNWDPDWQSTSSSKVAYLIQRLK LSE NDEAAL PP SLTKS               
Sbjct: 1146 KQDNWDPDWQSTSSSKVAYLIQRLKDLSERNDEAALLPPSSLTKSGALLQEVDHSRAITS 1205

Query: 1205 ------------------------DLTIAGIRFAGMYSPMHASNKMKSLATFQHDASCMV 1264
                                     LTIAGIRFAGMYSPMHASNKMKSLA FQHDASCMV
Sbjct: 1206 DHEMVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASCMV 1265

Query: 1265 LLMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMHETIEE 1324
            LLMDGSAALGLDLSFVTYVFLMEPIWD+SMEEQVISRAHRMGA RPIHVETLVMHETIEE
Sbjct: 1266 LLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETIEE 1325

Query: 1325 QMVQFLQDTDECKRLMKEEFSKPDYEGPRAHRSMHDFAGSNYLSQLKFVRTNPMMEKAVE 1346
            QM+QFLQDTDECKRLMKEEF KPDYEGPRAHRS+HDFAGSNYLSQLKFVRT P MEK  E
Sbjct: 1326 QMIQFLQDTDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVRTKPTMEKVAE 1368

[Close]

BLAST of Cp4.1LG01g14940 vs. NCBI nr
Match: gi|449449272|ref|XP_004142389.1| (PREDICTED: F-box protein At3g54460 [Cucumis sativus])

HSP 1 Score: 2330.4 bits (6038), Expect = 0.0e+00
Identity = 1148/1384 (82.95%), Postives = 1222/1384 (88.29%), Query Frame = 1


Query: 6    FSDYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLTPIEANPK 65
            FSDYKLCGFLCVVLAVPSP  +L + LRPGTRCYVS ESSDVCFTS+ GV+L+PIE +PK
Sbjct: 7    FSDYKLCGFLCVVLAVPSPQFDLLNLLRPGTRCYVSTESSDVCFTSQNGVLLSPIEESPK 66

Query: 66   PLSKAGVSPQDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHGS 125
             L K GV PQDSEQCRGTV GEG    E GD T KR  SA G R+S KKRTNRMGLVHG+
Sbjct: 67   SLFKPGVLPQDSEQCRGTVNGEGIGAAEIGDFTPKRGASAGGSRSSRKKRTNRMGLVHGN 126

Query: 126  MSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTVA 185
            MSVV+QIHALVVHKC+KIDAQVIF+DI   +EARAVLLVDV+LPVELWSGWQFP+SKT+A
Sbjct: 127  MSVVYQIHALVVHKCMKIDAQVIFLDI---QEARAVLLVDVYLPVELWSGWQFPKSKTIA 186

Query: 186  GALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHNC 245
             ALF+HL                CEWQERSS+LVGKDHSQ   +V KSV N AECHVHNC
Sbjct: 187  AALFKHL---------------SCEWQERSSILVGKDHSQDVHVVGKSVSNLAECHVHNC 246

Query: 246  KLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINI 305
            +LHNS GGS NRRLFELHEIFRSLPSIL+S KPEYTR+QPEDDYSQSG+WDISDD+L NI
Sbjct: 247  QLHNSSGGSPNRRLFELHEIFRSLPSILKSSKPEYTRMQPEDDYSQSGLWDISDDILFNI 306

Query: 306  MKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPLY 365
            +K LRPLDL+RVASTC HLRSL+A IMPCMKLKLYPHQQAAVEWMLHRER+AE FYHPLY
Sbjct: 307  LKVLRPLDLVRVASTCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAESFYHPLY 366

Query: 366  VPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA 425
             PFSTEDGFSFH+NTVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA
Sbjct: 367  APFSTEDGFSFHVNTVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA 426

Query: 426  EPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKRA 485
            EPPPG QIVWCTHNGNRKCGYYEVSS SNT TN+ ++KEAV  + LKG+EDLTYHTPKRA
Sbjct: 427  EPPPGAQIVWCTHNGNRKCGYYEVSSTSNTITNHFVLKEAVEWNPLKGLEDLTYHTPKRA 486

Query: 486  RLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSLS 545
            R+TTLDDRHT TN+SCAGNE+ SPSS     AV MVRCTRSLSSVKRNLLL YEGASSLS
Sbjct: 487  RMTTLDDRHT-TNNSCAGNELSSPSS-----AVDMVRCTRSLSSVKRNLLLAYEGASSLS 546

Query: 546  RHLNTGKKSTRTRTRKLAAGAKRAGVS-----NGFTNNYEVSETTTADKFEYKDTWVQCD 605
            + LN GKKSTRTRTRK   G K+ G S     NGFTNNYEV  TT ADKFEYKDTWVQCD
Sbjct: 547  KELNDGKKSTRTRTRKFPVGEKKVGASPASPSNGFTNNYEVLGTTNADKFEYKDTWVQCD 606

Query: 606  ACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGG 665
            ACHKWRKL+ETS+AD+S AWFCSM+TDPFYQSCSVPEESYDKCRPITN+ GFYSK+TSGG
Sbjct: 607  ACHKWRKLAETSVADSSAAWFCSMHTDPFYQSCSVPEESYDKCRPITNLLGFYSKETSGG 666

Query: 666  EEKNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSD 725
            E+KN+SFFTSVLKEN ALINSGTKR LTWLS+L PEKISEME TGLRSPIL SY++PG +
Sbjct: 667  EKKNVSFFTSVLKENRALINSGTKRTLTWLSSLTPEKISEMERTGLRSPILTSYIIPGGN 726

Query: 726  VCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATL 785
            V GFH++ +AFGLVRKMEKGT+RWYYP NLHNLAFDVAAL+ AL+EPLD VRLYLSRATL
Sbjct: 727  VRGFHQIIDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATL 786

Query: 786  IIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGP 845
            I+VPSNLVDHWKTQIQKH+RPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGP
Sbjct: 787  IVVPSNLVDHWKTQIQKHVRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGP 846

Query: 846  RKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLS 905
            RKRSILMQVHW RVILDEGHTLGSSLNLTNKLQMA+SL+S+NRWILTGTPTP+TPNSQLS
Sbjct: 847  RKRSILMQVHWSRVILDEGHTLGSSLNLTNKLQMAISLVSTNRWILTGTPTPNTPNSQLS 906

Query: 906  HLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIP 965
            HLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLL+LLRRCMISARK DLL+IP
Sbjct: 907  HLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKIDLLTIP 966

Query: 966  PCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNI 1025
            PCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSH+ESLLNPKQWK RS TIKNI
Sbjct: 967  PCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNI 1026

Query: 1026 RLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNLLYGGNCARCGEWCRL 1085
            RLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYS++KYNLLYGG+C+RCGEWCRL
Sbjct: 1027 RLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSYLKYNLLYGGSCSRCGEWCRL 1086

Query: 1086 PVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQP 1145
            PVIAPCRHLLCLDCVALD EGCTFPGCGKLYVMQTPET+ARPENPNPKWPVPKDLIELQP
Sbjct: 1087 PVIAPCRHLLCLDCVALDSEGCTFPGCGKLYVMQTPETLARPENPNPKWPVPKDLIELQP 1146

Query: 1146 SYKQDNWDPDWQSTSSSKVAYLIQRLKALSEANDEAALFPPPSLTKS------------- 1205
            SYKQDNWDPDWQSTSSSKVAYLI+RLK LSE N+EAAL PP SLTKS             
Sbjct: 1147 SYKQDNWDPDWQSTSSSKVAYLIERLKDLSETNNEAALLPPSSLTKSGALLQEVDHSRAI 1206

Query: 1206 --------------------------DLTIAGIRFAGMYSPMHASNKMKSLATFQHDASC 1265
                                       LTIAGIRFAGMYSPMHASNKMKSLA FQHDASC
Sbjct: 1207 TSDHEIVRDKVLIFSQFLEHIHVIEQQLTIAGIRFAGMYSPMHASNKMKSLAMFQHDASC 1266

Query: 1266 MVLLMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVETLVMHETI 1325
            MVLLMDGSAALGLDLSFVTYVFLMEPIWD+SMEEQVISRAHRMGA RPIHVETLVMHETI
Sbjct: 1267 MVLLMDGSAALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAIRPIHVETLVMHETI 1326

Query: 1326 EEQMVQFLQDTDECKRLMKEEFSKPDYEGPRAHRSMHDFAGSNYLSQLKFVRTNPMMEKA 1346
            EEQMVQFLQD DECKRLMKEEF KPDYEGPRAHRS+HDFAGSNYLSQLKFVRT P MEK 
Sbjct: 1327 EEQMVQFLQDPDECKRLMKEEFGKPDYEGPRAHRSLHDFAGSNYLSQLKFVRTKPTMEKV 1366

[Close]

BLAST of Cp4.1LG01g14940 vs. NCBI nr
Match: gi|307136385|gb|ADN34195.1| (chromatin remodeling complex subunit [Cucumis melo subsp. melo])

HSP 1 Score: 1800.0 bits (4661), Expect = 0.0e+00
Identity = 888/1051 (84.49%), Postives = 945/1051 (89.91%), Query Frame = 1


Query: 5    DFSDYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLTPIEANP 64
            DFSD+KLCGFL VVLAV SP SE  + LRPGTRCYVS ESSDVCFTS+ GVVL+P+E NP
Sbjct: 6    DFSDFKLCGFLSVVLAVSSPQSEFLNLLRPGTRCYVSAESSDVCFTSQNGVVLSPLEENP 65

Query: 65   KPLSKAGVSPQDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHG 124
            K LSK G  PQDSEQCRG V GEG    E G LT KR +SA G R+S KKRTNRMGLVHG
Sbjct: 66   KSLSKPGALPQDSEQCRGAVNGEGIGAAEIGILTPKRGVSAGGSRSSRKKRTNRMGLVHG 125

Query: 125  SMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTV 184
            +MSVV+QIHALVVHKC+KIDAQV FVDI   +EARAVLLVDV+LPVELWSGWQFP+SKTV
Sbjct: 126  NMSVVYQIHALVVHKCMKIDAQVTFVDI---QEARAVLLVDVYLPVELWSGWQFPKSKTV 185

Query: 185  AGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHN 244
            A ALF+HL                CEWQERSS+LVGKDHSQ   MV KSV N AECHVHN
Sbjct: 186  AAALFKHL---------------SCEWQERSSILVGKDHSQDVHMVGKSVSNVAECHVHN 245

Query: 245  CKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLIN 304
            CKLHNS GGS NRRLFELHEIFRSLPSIL+S KPEYTR+QPEDDY+QSGIWDISDD+L N
Sbjct: 246  CKLHNSSGGSPNRRLFELHEIFRSLPSILKSSKPEYTRMQPEDDYAQSGIWDISDDILFN 305

Query: 305  IMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPL 364
            I+KALRPLDL+RVASTC HLRSL+A IMPCMKLKLYPHQQAAVEWMLHRER+AEVFYHPL
Sbjct: 306  ILKALRPLDLVRVASTCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAEVFYHPL 365

Query: 365  YVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTL 424
            + P STEDGFSFH+NTVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTL
Sbjct: 366  FAPSSTEDGFSFHVNTVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTL 425

Query: 425  AEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKR 484
            AEPPPGVQIVWCTHNGNRKCGYYEVSS SNT TN+ L+KEAV  +SLKG+EDLTY TPKR
Sbjct: 426  AEPPPGVQIVWCTHNGNRKCGYYEVSSTSNTITNHFLLKEAVEWNSLKGLEDLTYRTPKR 485

Query: 485  ARLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSL 544
            AR+TTLDDRHT TN SCAGNE+ SPSS DYAKAV MVRCTRSLSSVKRNLLL YEGASSL
Sbjct: 486  ARMTTLDDRHT-TNSSCAGNELRSPSSADYAKAVHMVRCTRSLSSVKRNLLLAYEGASSL 545

Query: 545  SRHLNTGKKSTRTRTRKLAAGAKRAGVS--NGFTNNYEVSETTTADKFEYKDTWVQCDAC 604
            S+ LN GKKSTRTRTRK   G K+ G S  NG TNNYE   TT ADKFEYKDTWVQCDAC
Sbjct: 546  SKELNDGKKSTRTRTRKFPVGEKKVGASPSNGSTNNYEALGTTNADKFEYKDTWVQCDAC 605

Query: 605  HKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGGEE 664
            HKWRKL+ETSIAD+  AWFCSM+T+PFYQSCSVPEESYDKCRPITN+ GFYSK+TSGGEE
Sbjct: 606  HKWRKLAETSIADSGAAWFCSMHTNPFYQSCSVPEESYDKCRPITNLLGFYSKETSGGEE 665

Query: 665  KNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSDVC 724
            KNISFFTSVLKEN ALINSGTKRALTWLS+L PEKISEME TGLRSPIL SY+VPG +V 
Sbjct: 666  KNISFFTSVLKENRALINSGTKRALTWLSSLMPEKISEMERTGLRSPILTSYIVPGGNVR 725

Query: 725  GFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATLII 784
            GFH++F+AFGLVRKMEKGT+RWYYP NLHNLAFDVAAL+ AL+EPLD VRLYLSRATLI+
Sbjct: 726  GFHQIFDAFGLVRKMEKGTMRWYYPQNLHNLAFDVAALRIALSEPLDLVRLYLSRATLIV 785

Query: 785  VPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 844
            VPSNLVDHWKTQIQKH+RPGQL VYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK
Sbjct: 786  VPSNLVDHWKTQIQKHVRPGQLQVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPRK 845

Query: 845  RSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLSHL 904
            RSILMQVHW+RVILDEGHTLGSSLNLTNKLQMAVSL+S+NRWILTGTPTP+TPNSQLSHL
Sbjct: 846  RSILMQVHWNRVILDEGHTLGSSLNLTNKLQMAVSLVSTNRWILTGTPTPNTPNSQLSHL 905

Query: 905  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIPPC 964
            QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLL+LLRRCMISARKTDLL+IPPC
Sbjct: 906  QPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLNLLRRCMISARKTDLLTIPPC 965

Query: 965  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNIRL 1024
            IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSH+ESLLNPKQWK R  TIKNIRL
Sbjct: 966  IKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRCATIKNIRL 1025

Query: 1025 SCCVAGHIKVAEAGEDIQETMDILVDDGLDP 1054
            SCCVAGHIKVAEAGEDIQETMDILVDDGLDP
Sbjct: 1026 SCCVAGHIKVAEAGEDIQETMDILVDDGLDP 1037

[Close]

BLAST of Cp4.1LG01g14940 vs. NCBI nr
Match: gi|731435550|ref|XP_010645607.1| (PREDICTED: F-box protein At3g54460 isoform X1 [Vitis vinifera])

HSP 1 Score: 1660.2 bits (4298), Expect = 0.0e+00
Identity = 852/1405 (60.64%), Postives = 1017/1405 (72.38%), Query Frame = 1


Query: 2    DDDDFSDYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYGVVLTPIE 61
            DD     +K CGFL  VLA+  P       L  GTRC++  + S+V F SE  V+L+P++
Sbjct: 4    DDHSIPHHKHCGFLSAVLAINPP-----QTLDSGTRCHIFGDGSEVGFRSENDVILSPVD 63

Query: 62   ANPKPLSKAGVSPQDSEQCRGTVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGL 121
                  SKA  S  DS +C                              S +KR   +GL
Sbjct: 64   ------SKAKTSTGDSGEC------------------------------SRRKRKRGIGL 123

Query: 122  VHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRS 181
            VHGS+SVV QIHALVVHKC+KI A+V+     V  EARAV+LVDV+LP+ELWSGWQFPRS
Sbjct: 124  VHGSISVVRQIHALVVHKCVKIVARVV----RVCGEARAVVLVDVYLPIELWSGWQFPRS 183

Query: 182  KTVAGALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVG-KDHSQVADMVRKSVWNPAEC 241
             + AGALFRHL                C+W+ERSS+LV  +++ +  D   +S+WN ++C
Sbjct: 184  ASTAGALFRHL---------------SCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDC 243

Query: 242  HVHNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDD 301
            HV  CKLH +    S ++LFELHEIF+SLPS+    +P+ +R++P D   QSGIW++SDD
Sbjct: 244  HVLGCKLHCNALDPSKKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDD 303

Query: 302  VLINIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVF 361
            VLINI+ AL P+DL+RV++TCHHLRSL+ASIMPCMKLKL+PHQ AAVEWML RERNAE+ 
Sbjct: 304  VLINILTALAPMDLVRVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEIL 363

Query: 362  YHPLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKT 421
             HPL++ F TEDGF+F+INTVTGEIVT   P I DFRGG+FCDEPGLGKTITALSLILKT
Sbjct: 364  PHPLFIDFLTEDGFAFYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILKT 423

Query: 422  QGTLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLV-KEAVGCSSLKG------ 481
            QGT A+PP GVQ++WCTHN +++CGYYE++S+ N S N +   K  +G  + +G      
Sbjct: 424  QGTWADPPDGVQVIWCTHNSDQRCGYYELTSD-NVSVNKMFSGKRILGQVARRGWLSLDK 483

Query: 482  ---MEDLTYHTPKRARLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSV 541
               ME+  Y +P+R RL     +   + DSC G  + SP++     A ++VRCTRSLS V
Sbjct: 484  PTPMENRKYSSPERTRLVIPGVQIAGSTDSCPGKVIKSPTTVRSMPATRVVRCTRSLSRV 543

Query: 542  KRNLLLTYEGASSLSRHLNTGKKSTRTR----TRKLAAGAKRAGVSNGFTNNYEVSETTT 601
            KRNL+  YE AS   +     K S+  R    T +  +  KR G+S+G  +  + SE  +
Sbjct: 544  KRNLVYAYEEASGFGKERKLKKNSSERRQVANTPRHLSVDKRVGISHGLPHKCKRSEKDS 603

Query: 602  ADKFEYKDTWVQCDACHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPI 661
             D  E  +TW+QCDACHKWR+L E S+ADA+ AWFCSMN+DP YQSC VPEES+D  +PI
Sbjct: 604  EDHSECNETWIQCDACHKWRRLGEPSVADAAAAWFCSMNSDPSYQSCRVPEESWDDRQPI 663

Query: 662  TNIPGFYSKDTSGGEEKNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGL 721
            T +PGFY+K T GGEE+N+SFFTSVLKE+ A INS TK+AL WL+ L+P+K+SEM+T GL
Sbjct: 664  TYLPGFYAKGTPGGEEQNVSFFTSVLKEHYAFINSQTKKALIWLTKLSPDKLSEMDTVGL 723

Query: 722  RSPILASYVVPGSDVCGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTE 781
            R P+L +++V G D  GFHK+F+AFGLVR++EKGT RWYYP NL NL FD+ AL+ AL E
Sbjct: 724  RRPVLDTHLVSGGDH-GFHKIFQAFGLVRRVEKGTSRWYYPENLENLVFDLPALRIALCE 783

Query: 782  PLDSVRLYLSRATLIIVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDV 841
            PLDS RLYLSRATL++VPSNLVDHWKTQIQKH++PGQL VYVWTDH+KP AH LAWDYDV
Sbjct: 784  PLDSFRLYLSRATLVVVPSNLVDHWKTQIQKHVKPGQLRVYVWTDHKKPCAHNLAWDYDV 843

Query: 842  IITTFSRLSAEWGPRKRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWIL 901
            +ITTF+RLSAEW P KRS+LMQVHW RV+LDEGHTLGSSLNLTNKLQMAVSLI+SNRW+L
Sbjct: 844  VITTFNRLSAEWRPHKRSVLMQVHWLRVMLDEGHTLGSSLNLTNKLQMAVSLIASNRWLL 903

Query: 902  TGTPTPSTPNSQLSHLQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRR 961
            TGTPTP+TPNSQLSHLQP+L+FLHEE YGQN KSWE GILRPFEAEMEEGR  LL LL R
Sbjct: 904  TGTPTPNTPNSQLSHLQPMLKFLHEEGYGQNQKSWEDGILRPFEAEMEEGRSRLLLLLHR 963

Query: 962  CMISARKTDLLSIPPCIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLN 1021
            CMISARK DL +IPPCIKKV +LNFTEEHA+SYNELVVTVRRNILMADWNDPSH+ESLLN
Sbjct: 964  CMISARKADLQTIPPCIKKVTFLNFTEEHAKSYNELVVTVRRNILMADWNDPSHVESLLN 1023

Query: 1022 PKQWKSRSTTIKNIRLSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNLL 1081
            PKQWK R +TIKN+RLSCCVAGHIKV +AGEDIQETMDILV++GLD +S EY+FIKYNLL
Sbjct: 1024 PKQWKFRISTIKNVRLSCCVAGHIKVTDAGEDIQETMDILVENGLDTISDEYAFIKYNLL 1083

Query: 1082 YGGNCARCGEWCRLPVIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPN 1141
            YGG C RC EWCRLPVI PCRHLLCLDCVALD E CTFPGCG LY MQ+PE + RPENPN
Sbjct: 1084 YGGACMRCKEWCRLPVITPCRHLLCLDCVALDSEKCTFPGCGNLYEMQSPEILTRPENPN 1143

Query: 1142 PKWPVPK-------------------------------DLIELQPS-----YKQDNWDPD 1201
            PKWPVPK                                L  LQ +     Y  D  D D
Sbjct: 1144 PKWPVPKDLIELQPSYKQDTWDPDWQSTSSSKVTYIVKRLKALQEANRKSGYAMDE-DSD 1203

Query: 1202 WQSTSSSKVAYLIQRLKAL-----SEANDEAALFPPPSLT------------KSDLTIAG 1261
             +               AL     +  NDE +   P  +             +  LT+AG
Sbjct: 1204 IKDIDELVSLSEQNNCNALLQQDYTRLNDETSHISPEKVLIFSQFLEHIHVIEQQLTVAG 1263

Query: 1262 IRFAGMYSPMHASNKMKSLATFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDKSM 1321
            I+F+GMYSPMH+SNKMKSL+TFQHDA CM LLMDGSAALGLDLSFVT+VFLMEPIWD+SM
Sbjct: 1264 IKFSGMYSPMHSSNKMKSLSTFQHDADCMALLMDGSAALGLDLSFVTHVFLMEPIWDRSM 1323

Query: 1322 EEQVISRAHRMGATRPIHVETLVMHETIEEQMVQFLQDTDECKRLMKEEFSKPDYEGPRA 1339
            EEQVISRAHRMGATRPI VETL M  TIEEQM++FLQD DEC+R +KEEF KP  EG RA
Sbjct: 1324 EEQVISRAHRMGATRPIRVETLAMRGTIEEQMLEFLQDADECRRFLKEEFGKPYSEGVRA 1345

[Close]

BLAST of Cp4.1LG01g14940 vs. NCBI nr
Match: gi|703096880|ref|XP_010095964.1| (F-box protein [Morus notabilis])

HSP 1 Score: 1652.5 bits (4278), Expect = 0.0e+00
Identity = 840/1383 (60.74%), Postives = 1009/1383 (72.96%), Query Frame = 1


Query: 8    DYKLCGFLCVVLAVPSPLSELADALRPGTRCYVSVESSDVCFTSEYG-VVLTPIEANPKP 67
            D +LCGFLC VL V S   E       GT  ++  E+S V F S  G VVL+P+      
Sbjct: 15   DLELCGFLCAVLTVTSSSHETPPL---GTHFHIFRENSSVGFRSPAGDVVLSPV------ 74

Query: 68   LSKAGVSPQDSEQCRGTVGGEGT-STVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHGS 127
                 +SPQ  E+   +   E    + +      KR+ S  G  +  K R   +G+V+GS
Sbjct: 75   -----ISPQRCEETGPSSEKENAFGSAKENRKRPKRRKSNSGGCSKKKTRKRSIGMVNGS 134

Query: 128  MSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTVA 187
            MSVV  +HALV HKCL+I A+++  + GV  E RAVLLVDV+LP+ LWS WQFP+  +VA
Sbjct: 135  MSVVELLHALVTHKCLQITARLVRTEAGVGGEVRAVLLVDVYLPIALWSEWQFPKYGSVA 194

Query: 188  GALFRHLRLTLKKAIVGPTKELDCEWQERSSLLVGKDHSQVADMVRKSVWNPAECHVHNC 247
            GALFRHL                C+W  RSS++ G D+ + A    +S+W+ ++CHV  C
Sbjct: 195  GALFRHL---------------SCDWGHRSSMMAGGDYIKDALGASRSMWDLSDCHVLAC 254

Query: 248  KLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINI 307
            KLH     SS +RLFELHEIF+SLPS+ +    +  RIQP DD  +SGIW++SDD+LINI
Sbjct: 255  KLHYRITDSSKKRLFELHEIFKSLPSVAKMGYNDTFRIQPVDDSCRSGIWELSDDILINI 314

Query: 308  MKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLHRERNAEVFYHPLY 367
            +  L P++L++VA+TC HLR L+A IMPCMKLKL+PHQQAAV+WMLHRE+ AE   HPLY
Sbjct: 315  LAPLGPVELVKVAATCRHLRFLAALIMPCMKLKLFPHQQAAVQWMLHREQRAEALPHPLY 374

Query: 368  VPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLA 427
              F TEDG SF+I+T++GEI+   TP I DFRGG+FCDEPGLGKTITALSLILKTQG +A
Sbjct: 375  TAFVTEDGLSFYISTISGEIIYGETPTINDFRGGMFCDEPGLGKTITALSLILKTQGKVA 434

Query: 428  EPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNNLLVKEAVGCSSLKGMEDLTYHTPKRA 487
            +PP GV+I+WCTHNGN++CGYYE+  +    +N  L K  V   +    E L  ++ KRA
Sbjct: 435  DPPDGVEIIWCTHNGNQRCGYYELGGDYVAVSNLTLRKRVVDQKAQTSPEQLGCYSSKRA 494

Query: 488  RLTTLDDRHTVTNDSCAGNEMISPSSTDYAKAVQMVRCTRSLSSVKRNLLLTYEGASSLS 547
            RL  L+++ T  N     N++  P +T    A+ +  CTR+LS +K+NL+  +EG S  S
Sbjct: 495  RLIFLNEQATGLN-----NQVEKPIATCSKTAMSVFPCTRNLSRIKKNLVFKFEGESGFS 554

Query: 548  RHLNTGKKSTRTRTRKLAAG----AKRAGVSNGFTNNYEVSETTTADKFEYKDTWVQCDA 607
              +  GK S+R +      G      +A +S   + N +         +EY DTWVQCDA
Sbjct: 555  TEMKVGKNSSRVKHASYGLGHVSCENQADISREHSKNSKSCGKVMTGHYEYSDTWVQCDA 614

Query: 608  CHKWRKLSETSIADASTAWFCSMNTDPFYQSCSVPEESYDKCRPITNIPGFYSKDTSGGE 667
            CHKWRKL E+ I+  + AWFCSMNTDP  QSCSVPEES++   PIT + GFYSK  SGGE
Sbjct: 615  CHKWRKLQESWISGVTAAWFCSMNTDPQCQSCSVPEESWNDSGPITYLRGFYSKGKSGGE 674

Query: 668  EKNISFFTSVLKENMALINSGTKRALTWLSNLAPEKISEMETTGLRSPILASYVVPGSDV 727
            E+NISFF SVLKE+ +LINS TK+AL+WL  L+ +K+SEMET GLR P++++ + PG D 
Sbjct: 675  EQNISFFASVLKEHHSLINSATKKALSWLIKLSSDKLSEMETIGLRGPLISTCIDPGDDP 734

Query: 728  CGFHKMFEAFGLVRKMEKGTIRWYYPHNLHNLAFDVAALKTALTEPLDSVRLYLSRATLI 787
             GFH++F++FGL + +EKG +RWYYP  LHNL FDVAAL+ AL EPLDS+RLYLS+ATL+
Sbjct: 735  LGFHRIFQSFGLRKGVEKGIVRWYYPKKLHNLVFDVAALRIALCEPLDSIRLYLSKATLV 794

Query: 788  IVPSNLVDHWKTQIQKHIRPGQLLVYVWTDHRKPSAHCLAWDYDVIITTFSRLSAEWGPR 847
            +VP+ LVDHWKTQIQKH+  GQL VY+WTDHRKPSAH LAWDYDV+ITTFSRLSAEW  R
Sbjct: 795  VVPATLVDHWKTQIQKHVSSGQLRVYIWTDHRKPSAHSLAWDYDVVITTFSRLSAEWSSR 854

Query: 848  KRSILMQVHWHRVILDEGHTLGSSLNLTNKLQMAVSLISSNRWILTGTPTPSTPNSQLSH 907
            K+S LMQVHW RV+LDEGHTLGSS+ LTNKLQMAVSL++SNRWILTGTPTP+TPNSQLSH
Sbjct: 855  KKSALMQVHWLRVMLDEGHTLGSSVGLTNKLQMAVSLMASNRWILTGTPTPNTPNSQLSH 914

Query: 908  LQPLLRFLHEEAYGQNHKSWEAGILRPFEAEMEEGRLLLLDLLRRCMISARKTDLLSIPP 967
            LQPLL+FLHEEAYG N KSWEAGILRPFEAEMEEGR  LL LL RCMISARK DL +IPP
Sbjct: 915  LQPLLKFLHEEAYGLNQKSWEAGILRPFEAEMEEGRSRLLHLLHRCMISARKIDLKNIPP 974

Query: 968  CIKKVKYLNFTEEHARSYNELVVTVRRNILMADWNDPSHIESLLNPKQWKSRSTTIKNIR 1027
            CIKKV  L+FT+EHARSYNEL VTVRRNILMADWND SH+ESLLNPKQWK RSTTIKNIR
Sbjct: 975  CIKKVTLLDFTDEHARSYNELAVTVRRNILMADWNDHSHVESLLNPKQWKFRSTTIKNIR 1034

Query: 1028 LSCCVAGHIKVAEAGEDIQETMDILVDDGLDPMSQEYSFIKYNLLYGGNCARCGEWCRLP 1087
            LSCCVAGHIKV +AG+DIQETMD LV++GLDP S+EY+FIKYNLL GGNC RCGEWCRLP
Sbjct: 1035 LSCCVAGHIKVTDAGQDIQETMDALVENGLDPTSEEYAFIKYNLLDGGNCVRCGEWCRLP 1094

Query: 1088 VIAPCRHLLCLDCVALDCEGCTFPGCGKLYVMQTPETIARPENPNPKWPVPKDLIELQPS 1147
            VI PCRHLLCLDCVALD E CT+PGCG LY MQTP+T+ARPENPNPKWPVPKDLIELQPS
Sbjct: 1095 VITPCRHLLCLDCVALDSERCTYPGCGNLYEMQTPDTLARPENPNPKWPVPKDLIELQPS 1154

Query: 1148 YKQ----------DNWDPDWQSTSSSKVAYLIQRL------------------------- 1207
            YKQ          DNWDPDWQSTSSSKVAYLI  L                         
Sbjct: 1155 YKQARVAYTLCIPDNWDPDWQSTSSSKVAYLIHSLKELQDANNEVQPPKDDGTDVKNIQG 1214

Query: 1208 ---------KALSEANDEAALFPP----PSLTKSDLTIAGIRFAGMYSPMHASNKMKSLA 1267
                       ++   D+  +F        + +  LTIAGI+FAGMYSPMH+SNKMKSL 
Sbjct: 1215 LLCQSWTRNSNINTHKDKFLVFSQFLEHIHVIEQQLTIAGIKFAGMYSPMHSSNKMKSLT 1274

Query: 1268 TFQHDASCMVLLMDGSAALGLDLSFVTYVFLMEPIWDKSMEEQVISRAHRMGATRPIHVE 1327
            TFQ+D +CMVLLMDGSAALGLDLSFV++VFLMEPIWDKSMEEQVISRAHRMGATRPI+VE
Sbjct: 1275 TFQNDETCMVLLMDGSAALGLDLSFVSHVFLMEPIWDKSMEEQVISRAHRMGATRPIYVE 1334

Query: 1328 TLVMHETIEEQMVQFLQDTDECKRLMKEEFSKPDYEGPRAHRSMHDFAGSNYLSQLKFVR 1337
            TL M  TIEEQMV FLQD  E +RL+K+EF K + EG R HRS+HDFA +NYLSQL+FVR
Sbjct: 1335 TLAMRSTIEEQMVAFLQDATERRRLLKKEFGKTNSEGARTHRSLHDFAVNNYLSQLRFVR 1363

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g14940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FB304_ARATH	0.0e+00	51.84	F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1	[more]
SM3L2_ARATH	1.7e-39	26.69	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati...	[more]
SM3L3_ARATH	8.8e-33	27.59	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati...	[more]
HLTF_HUMAN	1.7e-31	24.49	Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2	[more]
HLTF_RABIT	2.0e-29	24.28	Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF PE=1 SV=1	[more]

BLAST of Cp4.1LG01g14940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTQ6_CUCSA	0.0e+00	82.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623770 PE=4 SV=1	[more]
E5GCJ6_CUCME	0.0e+00	84.49	Chromatin remodeling complex subunit (Fragment) OS=Cucumis melo subsp. melo PE=4...	[more]
W9RB23_9ROSA	0.0e+00	60.74	F-box protein OS=Morus notabilis GN=L484_023953 PE=4 SV=1	[more]
A0A0B0PRQ1_GOSAR	0.0e+00	60.51	Uncharacterized protein OS=Gossypium arboreum GN=F383_07457 PE=4 SV=1	[more]
A0A0D2VUD8_GOSRA	0.0e+00	61.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017400 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g14940 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54460.1	0.0e+00	51.84	SNF2 domain-containing protein / helicase domain-containing protein ...	[more]
AT5G22750.1	9.3e-41	26.69	DNA/RNA helicase protein	[more]
AT5G43530.1	5.0e-34	27.59	Helicase protein with RING/U-box domain	[more]
AT5G05130.1	2.1e-24	22.28	DNA/RNA helicase protein	[more]
AT2G28290.1	8.5e-10	25.42	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of Cp4.1LG01g14940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092199\|ref\|XP_008446949.1\|	0.0e+00	83.94	PREDICTED: F-box protein At3g54460 [Cucumis melo]	[more]
gi\|449449272\|ref\|XP_004142389.1\|	0.0e+00	82.95	PREDICTED: F-box protein At3g54460 [Cucumis sativus]	[more]
gi\|307136385\|gb\|ADN34195.1\|	0.0e+00	84.49	chromatin remodeling complex subunit [Cucumis melo subsp. melo]	[more]
gi\|731435550\|ref\|XP_010645607.1\|	0.0e+00	60.64	PREDICTED: F-box protein At3g54460 isoform X1 [Vitis vinifera]	[more]
gi\|703096880\|ref\|XP_010095964.1\|	0.0e+00	60.74	F-box protein [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR017907	Znf_RING_CS
IPR014001	Helicase_ATP-bd
IPR011124	Znf_CW
IPR001810	F-box_dom
IPR001650	Helicase_C
IPR000330	SNF2_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004386	helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g14940.1	Cp4.1LG01g14940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000330	SNF2-related, N-terminal domain	PFAM	PF00176	SNF2_N	coord: 342..991 score: 2.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 1188..1265 score: 4.
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 1183..1265 score: 1.
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 1161..1303 score: 8
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 288..330 score: 6.2
IPR011124	Zinc finger, CW-type	PFAM	PF07496	zf-CW	coord: 595..638 score: 9.1
IPR011124	Zinc finger, CW-type	PROFILE	PS51050	ZF_CW	coord: 590..641 score: 13
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 335..919 score: 1.1
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 747..908 score: 10
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 1086..1095 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 394..421 score: 1.1E-18coord: 774..903 score: 1.1E-18coord: 337..356 score: 1.1E-18coord: 1156..1296 score: 9.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1148..1291 score: 5.76E-27coord: 850..908 score: 5.76E-27coord: 324..356 score: 2.92E-9coord: 395..424 score: 2.92E-9coord: 776..933 score: 9.61
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 291..328 score: 7.
None	No IPR available	PANTHER	PTHR10799	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED	coord: 766..1007 score: 2.4E-130coord: 1146..1287 score: 2.4E-130coord: 1071..1110 score: 2.4E-130coord: 329..422 score: 2.4E
None	No IPR available	PANTHER	PTHR10799:SF573	TRANSCRIPTION TERMINATION FACTOR 2	coord: 1146..1287 score: 2.4E-130coord: 1071..1110 score: 2.4E-130coord: 329..422 score: 2.4E-130coord: 766..1007 score: 2.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g14940	Cucsa.308000	Cucumber (Gy14) v1	cgycpeB0806
Cp4.1LG01g14940	CmaCh04G013310	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g14940	CmoCh04G014060	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g14940	Cla009940	Watermelon (97103) v1	cpewmB435
Cp4.1LG01g14940	Csa5G623770	Cucumber (Chinese Long) v2	cpecuB439
Cp4.1LG01g14940	MELO3C012467	Melon (DHL92) v3.5.1	cpemeB363
Cp4.1LG01g14940	ClCG05G026770	Watermelon (Charleston Gray)	cpewcgB396
Cp4.1LG01g14940	CSPI05G27550	Wild cucumber (PI 183967)	cpecpiB439
Cp4.1LG01g14940	Lsi04G000300	Bottle gourd (USVL1VR-Ls)	cpelsiB352
Cp4.1LG01g14940	MELO3C012467.2	Melon (DHL92) v3.6.1	cpemedB423
Cp4.1LG01g14940	CsaV3_5G036710	Cucumber (Chinese Long) v3	cpecucB0543
Cp4.1LG01g14940	Bhi07G001037	Wax gourd	cpewgoB0556
Cp4.1LG01g14940	CsGy5G026960	Cucumber (Gy14) v2	cgybcpeB648
Cp4.1LG01g14940	Carg01990	Silver-seed gourd	carcpeB1177

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g14940	Cucurbita pepo (Zucchini)	cpecpeB040
Cp4.1LG01g14940	Cucurbita maxima (Rimu)	cmacpeB429
Cp4.1LG01g14940	Cucurbita moschata (Rifu)	cmocpeB392
Cp4.1LG01g14940	Silver-seed gourd	carcpeB1021