Cp4.1LG01g13660 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g13660
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEthylene-responsive transcription factor ERF118 family
LocationCp4.1LG01 : 8094152 .. 8095075 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCATTCTAATCAGAAACTTGTTAGCAGCAACAGAAAATCCAAGCTGCATCCAAAAAATTTCTCTGCGGATTCCAAAATGAGGAGAAAAGTTCGCATAATCTGTTACGATCCTGATGCAACCGACTCATCTTCAAGCGAAGATGAAGGAGAAAGATATGGAAGAAAGTTTAATCGAACCGTACACGAAATCCACCTGCCTCCGCTGAAGAAGACTCTCGAATCCGAGAGTTCTCAGAACAGCAACAACGAAAACAAAAACCCTAAGCTTAAGCAATCCAAGGTTCAGATCAAAAACCCTTCCTCCTCCCGAAGACAATCGTCTTCCAAATACAGAGGCGTGAGACAGAGAGCTTGGGGAAAATGGGCGGCTGAGATTCGAGATCCCTTTAAGAGAAGCCGTATTTGGCTTGGTACTTACGATACTGCAGAAGAAGCTTCTCAAGCTTATGAGTCGAGGAGGCTGCAGTTTGAAGCTATGGCGGCAGAAATGGCTGTTGAAGAAGGCAACAGGACCGTATCCTCATCCGCCGCTGTTCTTTCAGAGAGCACTGCGGAGACCACCGTATCCCACACCTCACCATCGTCGGTTTTCGAATGGGACGATTCAACTTCCCAAAGCCAAGATTTGAAAGTGGGAGATTCAATCAAAGAAGAAACAGGCACGAATATGAACTACCTTCAAGAAGCCGATCAGAGCCATCCGTTTATAGACGAAATAAACATGGGGATCAATTTTGATTCGATTCTAGCGGATGGAATCGGAATGTTCTTGGAGGATTTTGTAAGTTTAGAGAACACCCAGATTTTTGGGTTCGGCGATGATGAACCCAGCGGCTTTCCAAATGCGGATTTCGGGGATTTTGGGAACGATGACATTTCTTGTTGGCTTGATGATTCCATCAACATTACCTGCCCTTAA

mRNA sequence

ATGCCGCATTCTAATCAGAAACTTGTTAGCAGCAACAGAAAATCCAAGCTGCATCCAAAAAATTTCTCTGCGGATTCCAAAATGAGGAGAAAAGTTCGCATAATCTGTTACGATCCTGATGCAACCGACTCATCTTCAAGCGAAGATGAAGGAGAAAGATATGGAAGAAAGTTTAATCGAACCGTACACGAAATCCACCTGCCTCCGCTGAAGAAGACTCTCGAATCCGAGAAGAGCACTGCGGAGACCACCGTATCCCACACCTCACCATCGTCGGTTTTCGAATGGGACGATTCAACTTCCCAAAGCCAAGATTTGAAAGTGGGAGATTCAATCAAAGAAGAAACAGGCACGAATATGAACTACCTTCAAGAAGCCGATCAGAGCCATCCGTTTATAGACGAAATAAACATGGGGATCAATTTTGATTCGATTCTAGCGGATGGAATCGGAATGTTCTTGGAGGATTTTGTAAGTTTAGAGAACACCCAGATTTTTGGGTTCGGCGATGATGAACCCAGCGGCTTTCCAAATGCGGATTTCGGGGATTTTGGGAACGATGACATTTCTTGTTGGCTTGATGATTCCATCAACATTACCTGCCCTTAA

Coding sequence (CDS)

ATGCCGCATTCTAATCAGAAACTTGTTAGCAGCAACAGAAAATCCAAGCTGCATCCAAAAAATTTCTCTGCGGATTCCAAAATGAGGAGAAAAGTTCGCATAATCTGTTACGATCCTGATGCAACCGACTCATCTTCAAGCGAAGATGAAGGAGAAAGATATGGAAGAAAGTTTAATCGAACCGTACACGAAATCCACCTGCCTCCGCTGAAGAAGACTCTCGAATCCGAGAAGAGCACTGCGGAGACCACCGTATCCCACACCTCACCATCGTCGGTTTTCGAATGGGACGATTCAACTTCCCAAAGCCAAGATTTGAAAGTGGGAGATTCAATCAAAGAAGAAACAGGCACGAATATGAACTACCTTCAAGAAGCCGATCAGAGCCATCCGTTTATAGACGAAATAAACATGGGGATCAATTTTGATTCGATTCTAGCGGATGGAATCGGAATGTTCTTGGAGGATTTTGTAAGTTTAGAGAACACCCAGATTTTTGGGTTCGGCGATGATGAACCCAGCGGCTTTCCAAATGCGGATTTCGGGGATTTTGGGAACGATGACATTTCTTGTTGGCTTGATGATTCCATCAACATTACCTGCCCTTAA

Protein sequence

MPHSNQKLVSSNRKSKLHPKNFSADSKMRRKVRIICYDPDATDSSSSEDEGERYGRKFNRTVHEIHLPPLKKTLESEKSTAETTVSHTSPSSVFEWDDSTSQSQDLKVGDSIKEETGTNMNYLQEADQSHPFIDEINMGINFDSILADGIGMFLEDFVSLENTQIFGFGDDEPSGFPNADFGDFGNDDISCWLDDSINITCP
BLAST of Cp4.1LG01g13660 vs. TrEMBL
Match: A0A0A0KWF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609620 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-46
Identity = 98/125 (78.40%), Postives = 108/125 (86.40%), Query Frame = 1

Query: 78  KSTAETTVSHTSPSSVFEWDDSTSQSQDLKVG-DSIKEETGTNMNYLQEADQSHPFIDEI 137
           +STAETTVSHTSPSSV EW DST QS DLK G +SIKEET +NMNYLQE D S+PF++EI
Sbjct: 184 ESTAETTVSHTSPSSVLEWADSTVQSHDLKEGTESIKEETDSNMNYLQEGDPSNPFMEEI 243

Query: 138 NMGINFDSILADGIGMFLEDFVSLENTQIFGFGDDEPSGFPNADFGDFGNDDISCWLDDS 197
           +MGI+FDSILADGIGMFLEDF S +NTQI G  DDEPSG P+ DF DFGNDDISCWLDDS
Sbjct: 244 SMGIDFDSILADGIGMFLEDFASFDNTQILGLADDEPSGLPSWDFEDFGNDDISCWLDDS 303

Query: 198 INITC 202
           INITC
Sbjct: 304 INITC 308

BLAST of Cp4.1LG01g13660 vs. TrEMBL
Match: W9RLP9_9ROSA (Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_014665 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15
Identity = 57/145 (39.31%), Postives = 77/145 (53.10%), Query Frame = 1

Query: 76  SEKSTAETTVSHTSPSSVFEWDDSTSQSQD-LKVGDSIKEETGTNMN------------- 135
           S    +E + SH SPSSV E + STS S   L    S   E+  N+N             
Sbjct: 195 SSSEDSEVSQSHNSPSSVLEPETSTSASAPPLASASSSASESNLNVNGADLVKKSVDVDM 254

Query: 136 ----YLQEADQSHPFIDEINMGINFDSILADGIGMFL-EDFVSLENTQIFGFGDDEPSGF 195
               ++ EA  S PF  E+ +   FD +L D  G FL +DF S+++ QIFGF   EPS  
Sbjct: 255 LDLSFMDEALASLPFEQELGLAPEFDQLLLDDFGQFLNDDFSSIDDVQIFGFDGVEPSEL 314

Query: 196 PNADFGDFGNDDISCWLDDSINITC 202
           P+ DF D G DD++CW+DD++NI C
Sbjct: 315 PDCDFEDLGKDDMACWMDDALNIPC 339

BLAST of Cp4.1LG01g13660 vs. TrEMBL
Match: A0A0A0K880_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039270 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.3e-15
Identity = 54/133 (40.60%), Postives = 83/133 (62.41%), Query Frame = 1

Query: 75  ESEKSTAETTVSHTSPSS-VFEWDDSTSQSQDLKVGDSIKEETGTNM-NYLQEADQSHPF 134
           E  +  +++ VS TSP++ + E + S+S    + + +  +E   TN+ N LQ  D    F
Sbjct: 191 EENEEESDSVVSQTSPAAAILEMETSSS----VLIKEDEEEMIDTNLINELQVPDLG--F 250

Query: 135 IDE---INMGI-NFDSILADGIGMFLEDFVSLENTQIFGFGDDEPSGFPNADFGDFGNDD 194
           +DE   IN+G+   D    D IG FL+DF ++++ QI+GF DD PS  P+ DF DFGNDD
Sbjct: 251 VDEGMEINLGLPELDPFFMDDIGQFLDDFSAMDDIQIYGFDDDVPSCLPDCDFDDFGNDD 310

Query: 195 ISCWLDDSINITC 202
           ISCW+D+++N+ C
Sbjct: 311 ISCWVDEALNVPC 317

BLAST of Cp4.1LG01g13660 vs. TrEMBL
Match: F6HEX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03470 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.9e-13
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 1

Query: 81  AETTVSHTSPSSVFEWDDSTSQSQDLKVG-DSIKEETGTNMNYLQEADQSHPFID----- 140
           +++ +SHTSPSSV E + STS       G D+ KE  GTN+ +   A+Q  P  D     
Sbjct: 186 SDSLLSHTSPSSVLELETSTSHYNGGGHGTDTTKEGVGTNLIHANGAEQQKPISDFAEEP 245

Query: 141 --------EINMGINFDSILADGI-GMFLEDFVSLENTQIFGFGDDEPSGFPNADFGDFG 200
                   E+NM   F+S   D   G  L+DF  L++ +IFGF ++EPS  P+ DF D G
Sbjct: 246 LMAPPIGQELNMEAEFESFFDDNNWGRILDDFNCLDDLRIFGFDNEEPSDLPDFDF-DLG 305

Query: 201 NDDISCWLDDSINITCP 203
           ND+ + W+D+ +NI+CP
Sbjct: 306 NDEFA-WMDEPLNISCP 320

BLAST of Cp4.1LG01g13660 vs. TrEMBL
Match: I1LEX1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G274600 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-11
Identity = 53/148 (35.81%), Postives = 74/148 (50.00%), Query Frame = 1

Query: 71  KKTLESEKSTAETTVSHTSPSSVFEWDDSTSQSQDLKVGDSIKEETGTNMNYLQEADQSH 130
           +K   +   + E+ +SH SPSSV E D S S+S + K   S +E TG N    + A    
Sbjct: 208 EKFSTTSDDSEESMLSHNSPSSVLELDTSASKSVE-KGNGSTEEATGANNLVAELAGLEI 267

Query: 131 PFID-----------------EINMGINFDSILADGIGMFLEDFVSLENTQIFGFGDDEP 190
           P +                  E N G++FD +  +  G   EDF  LEN  I GF D EP
Sbjct: 268 PDLSLLNLPPPPSVAADAAGIEPNFGLDFDWLSFNDYGQGFEDFGGLENIHIGGFDDTEP 327

Query: 191 SGFPNADFGDFGNDDISCWLDDSINITC 202
           S  P+ DFGDFG D+ + W+++ +NI C
Sbjct: 328 SELPDFDFGDFGADEFAGWIEEPLNIPC 354

BLAST of Cp4.1LG01g13660 vs. NCBI nr
Match: gi|449434636|ref|XP_004135102.1| (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 3.0e-46
Identity = 98/125 (78.40%), Postives = 108/125 (86.40%), Query Frame = 1

Query: 78  KSTAETTVSHTSPSSVFEWDDSTSQSQDLKVG-DSIKEETGTNMNYLQEADQSHPFIDEI 137
           +STAETTVSHTSPSSV EW DST QS DLK G +SIKEET +NMNYLQE D S+PF++EI
Sbjct: 184 ESTAETTVSHTSPSSVLEWADSTVQSHDLKEGTESIKEETDSNMNYLQEGDPSNPFMEEI 243

Query: 138 NMGINFDSILADGIGMFLEDFVSLENTQIFGFGDDEPSGFPNADFGDFGNDDISCWLDDS 197
           +MGI+FDSILADGIGMFLEDF S +NTQI G  DDEPSG P+ DF DFGNDDISCWLDDS
Sbjct: 244 SMGIDFDSILADGIGMFLEDFASFDNTQILGLADDEPSGLPSWDFEDFGNDDISCWLDDS 303

Query: 198 INITC 202
           INITC
Sbjct: 304 INITC 308

BLAST of Cp4.1LG01g13660 vs. NCBI nr
Match: gi|659091526|ref|XP_008446593.1| (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 3.4e-45
Identity = 99/126 (78.57%), Postives = 107/126 (84.92%), Query Frame = 1

Query: 78  KSTAETTVSHTSPSSVFEWDDSTSQSQDLKVG-DSIKEETGTNMNYLQEADQSHPFIDEI 137
           +STAETTVSHTSPSSV EW DST QS DLK G +SIKEET +NMNYLQE D  +PFIDEI
Sbjct: 184 ESTAETTVSHTSPSSVLEWADSTVQSHDLKEGTESIKEETDSNMNYLQEGDPGNPFIDEI 243

Query: 138 NMGINFDSILADGIGMFLEDFVSLENTQIFGFGDDEPSG-FPNADFGDFGNDDISCWLDD 197
           NMGI+FDSILADGIGMFLEDF S ++TQI G  DDEPSG  P+ DF DFGNDDISCWLDD
Sbjct: 244 NMGIDFDSILADGIGMFLEDFASFDDTQILGLADDEPSGRLPSWDFEDFGNDDISCWLDD 303

Query: 198 SINITC 202
           SINITC
Sbjct: 304 SINITC 309

BLAST of Cp4.1LG01g13660 vs. NCBI nr
Match: gi|703127217|ref|XP_010103775.1| (Ethylene-responsive transcription factor [Morus notabilis])

HSP 1 Score: 91.7 bits (226), Expect = 1.6e-15
Identity = 57/145 (39.31%), Postives = 77/145 (53.10%), Query Frame = 1

Query: 76  SEKSTAETTVSHTSPSSVFEWDDSTSQSQD-LKVGDSIKEETGTNMN------------- 135
           S    +E + SH SPSSV E + STS S   L    S   E+  N+N             
Sbjct: 195 SSSEDSEVSQSHNSPSSVLEPETSTSASAPPLASASSSASESNLNVNGADLVKKSVDVDM 254

Query: 136 ----YLQEADQSHPFIDEINMGINFDSILADGIGMFL-EDFVSLENTQIFGFGDDEPSGF 195
               ++ EA  S PF  E+ +   FD +L D  G FL +DF S+++ QIFGF   EPS  
Sbjct: 255 LDLSFMDEALASLPFEQELGLAPEFDQLLLDDFGQFLNDDFSSIDDVQIFGFDGVEPSEL 314

Query: 196 PNADFGDFGNDDISCWLDDSINITC 202
           P+ DF D G DD++CW+DD++NI C
Sbjct: 315 PDCDFEDLGKDDMACWMDDALNIPC 339

BLAST of Cp4.1LG01g13660 vs. NCBI nr
Match: gi|449446199|ref|XP_004140859.1| (PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 6.2e-15
Identity = 54/133 (40.60%), Postives = 83/133 (62.41%), Query Frame = 1

Query: 75  ESEKSTAETTVSHTSPSS-VFEWDDSTSQSQDLKVGDSIKEETGTNM-NYLQEADQSHPF 134
           E  +  +++ VS TSP++ + E + S+S    + + +  +E   TN+ N LQ  D    F
Sbjct: 191 EENEEESDSVVSQTSPAAAILEMETSSS----VLIKEDEEEMIDTNLINELQVPDLG--F 250

Query: 135 IDE---INMGI-NFDSILADGIGMFLEDFVSLENTQIFGFGDDEPSGFPNADFGDFGNDD 194
           +DE   IN+G+   D    D IG FL+DF ++++ QI+GF DD PS  P+ DF DFGNDD
Sbjct: 251 VDEGMEINLGLPELDPFFMDDIGQFLDDFSAMDDIQIYGFDDDVPSCLPDCDFDDFGNDD 310

Query: 195 ISCWLDDSINITC 202
           ISCW+D+++N+ C
Sbjct: 311 ISCWVDEALNVPC 317

BLAST of Cp4.1LG01g13660 vs. NCBI nr
Match: gi|659089721|ref|XP_008445662.1| (PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-14
Identity = 53/133 (39.85%), Postives = 81/133 (60.90%), Query Frame = 1

Query: 75  ESEKSTAETTVSHTSPSS-VFEWDDSTSQSQDLKVGDSIKEETGTNM-NYLQEADQSHPF 134
           E  +  +++ VS T P++ + E + S+S      + +  +E   TN+ N LQ  D    F
Sbjct: 192 EENEEESDSVVSQTFPAAAIIEMETSSSAL----IKEDEEEVIDTNLINELQVPDLG--F 251

Query: 135 IDE---INMGI-NFDSILADGIGMFLEDFVSLENTQIFGFGDDEPSGFPNADFGDFGNDD 194
           +DE   IN+G+   D    D IG FL+DF ++++ QI+GF DD PS  P+ DF DFGNDD
Sbjct: 252 VDEGMEINLGLPELDQFFMDDIGQFLDDFSAMDDIQIYGFDDDVPSCLPDCDFDDFGNDD 311

Query: 195 ISCWLDDSINITC 202
           ISCW+D+++N+ C
Sbjct: 312 ISCWVDEALNVPC 318

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KWF1_CUCSA2.1e-4678.40Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609620 PE=4 SV=1[more]
W9RLP9_9ROSA1.1e-1539.31Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_014665 PE=4 ... [more]
A0A0A0K880_CUCSA4.3e-1540.60Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039270 PE=4 SV=1[more]
F6HEX1_VITVI6.9e-1339.42Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03470 PE=4 SV=... [more]
I1LEX1_SOYBN2.2e-1135.81Uncharacterized protein OS=Glycine max GN=GLYMA_10G274600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|449434636|ref|XP_004135102.1|3.0e-4678.40PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus... [more]
gi|659091526|ref|XP_008446593.1|3.4e-4578.57PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo][more]
gi|703127217|ref|XP_010103775.1|1.6e-1539.31Ethylene-responsive transcription factor [Morus notabilis][more]
gi|449446199|ref|XP_004140859.1|6.2e-1540.60PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis sativus][more]
gi|659089721|ref|XP_008445662.1|5.2e-1439.85PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13660.1Cp4.1LG01g13660.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 18..65
score: 1.1
NoneNo IPR availablePANTHERPTHR31190:SF17SUBFAMILY NOT NAMEDcoord: 18..65
score: 1.1

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g13660Cp4.1LG09g02900Cucurbita pepo (Zucchini)cpecpeB040