Cp4.1LG01g13650 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g13650
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHomocysteine S-methyltransferase family protein
LocationCp4.1LG01 : 8072804 .. 8079485 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCATGTCCTTACCGTTTCTGTTTTTTTTTTTTTNTTTAAGTAATTAAAGCAAGTTGTAAGGGTTAATGTGACGTGTATGAAATTGAAGCCTATGAGATGTGATGTGGTGGTCCACAAGAAAATGTTCCCAACTTTTGACCTCCAAATTTCTGGTCCCTCTCCCATCTTGCTGTTGATTTAGGGGGAGGGATGAGTAAGTTTGGACCATCCATCAACGGCATCACGTATGATAAGTTGGTAGGCATATGATATTGGAGCAAAGTAGGGGACCACATACGAATAAGACAATCTTGAAGATAAGATGACTACAAAAATTTTAAAAGAAAGGAAAGTTATTACCCATATCAATAAAGCCATCACGTTTGAAGTGTTTTTGGTATAAGGGTAGATTAGAGATTTACCAAAACATATGCATTTATTCATAGACCAAACTGGGGTGAGTTATTTGACATTATATAACAATATTTATGAGAGTAGGTATTTTGTATTATTTGTGTGTGTGTATATATATGTTCCCAACCACCAAGGCTGAGGCGCGCGTTCCAATTGAAAAGGGCAGTGCTAGAGAGTTTAATTGCGAGGCTGGAAGAGGCAGCTATCCAGCCAACCATTGCATGTCTTTCACTGAATCTGCCCCATTTTGCCTGACGATATTCAGTTCTATATATCCCCTAATGTCTTTAATGTTCTCTCCATCTAGCTAACATGATGGTGCACAAGTTGAGGTATTCTCAAGAACACATCTTTTTTCAGTATATATATTATACTGCCCACCCAATTTAACTTTCAAACTTATTATTGATGGGTAGGGTGGGCAGTTATTCATTATTTCCTGTTCAACCCATTATTTTGTCACTCTAGTTTACTTCACCCTTGTAGGTCAGGGTTAGGTGAATCTCCTGCTTACATTTCAAACAAACGATTTAATAATTTATCTACTTATGCTTAATGAAATCAAACAAGATTTGGGTTTTATTCAGAATAGTGAATGGGCTTGAGCCCATCAATTTGAAAAATGGAAATGGATTTGGGTTTTATTCAGAATAGTGAATGGGCTTGAGCCCATCAATTTGAAAAATGGAAATGGATTTGGGTTTTATACTCCACTAACCCCGGGGGCATCGAAACGGGGATAGTGGCGCGCACCACTGGACAAACTGACTTCCGGAGAAGGAGAAGAAACACGGCGCTGGAGGTTGTGCGGTGATTGATGGAGGTTTCGCTACGCAGCTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCATGTCCTTACCGTTTCTGTTTTTTTTTTTTTTGTTTCGGTGCATCACGTTCTCATCGGTGCTTATTGATTGGGTTAAATGCGCAGGTCCATTTGGAGTACTTGGAGGCAGGGATAAATATTTTGGTTTCTTCGTCTTACCAGGTTTGTAATGCTAATGGACTGAGCTTTCTTTATTCTTTTTTCGACTACATACGTGAAAAACTTTTGTCCATTGCACTCTGTGACGGCTTTTGCAGTACATTGTTTTTCCTTTTTTTTAAAAAAAAATGTTTACTGTTGTTTATTTAAAACTTGGGGATTCAAAGTGGATATTTGAATGTGAATGCGGACCAAAGTGATCACTCCTCTTGAATTCAAATTTAAGTTCAAACTGAGCATTTCTATCCTGTCGTGAAACAATGAACTAAAATTGAACGGCTGTTGTACACTCACGAATGTGGAGAATTTCGATCAAGTTAATTGAATTTGATTAAAGTGCTTTCCATGGCATAGCATTTTTGGACATTCAAGGTGTTACAATTAGTGGAGTGGATCCAAATTATGCTACATGATGGATTATAACCGGTTGTTGCTAGAAGGGACATTCAATAGGCGTCAGTATTTAATATTTGGAAGGGTAATGTTTGTATGCTTACTGATTTCTAACCACATCGGCTTAGCTCAATTGTCAAAAGTGGAAGCTATGAACTAGGATATCTATTCTAAATGTATCACTACCTATCTAAGATATTAAATATTCAGAAAGTTTTCCAATGTTAAACGTTGTAGAATTAAGCGATCAGTTCATCTGATTGATTCAGTGACATTTAAACTGATATCTAGCTTGTCATGCTATATTGCCATCACAAGGTAAAAGAGATTGAAATTCAATTTTGCATAGCTTAGGATTTGTATAGGTCAATAAATTGAATCTATAAGCCCGTTTCAGTTTTCACAGCTTTATTATACCATATCAGAGTTCTCTATATTTTATTGACCCGAAATGAAATTCGACTGTGAAATATGACATAGTTTTGTGTCTTAAAATTTCTTAAGAATTCCAATAATCTTACGGAATAAGGATAGAAGTATCTTGCCTTGTTTTATTTCTTAATTTTTTTTTTATAGAAATTATTCCTTCTGTAAATCAGTATTCAAGCCAGTTAATTACTCTCTCACACATTTTATCCTATTACAGGCCACCATTCCTGGGTTTATATCATAGGAGCTGTCCATGGAAGAAGGGGAGTTGCTCTTAGAAAAGAGTGTTAAAATGGAAGCTCGTGATAGTTTTTGGGATTCTGTGAAGAGTATCCCTGGACATAATTACAATCGGGCTTTGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTGCTGATGGCTCAGAGTACAGGTGAATTATACATTTGAATATTGAAATAAATATGACTCTGACATTCTGAACTAAACATATCCCAGGTGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGTTTGTTTTATGCCAACTCCTCTTATATCATCTAAGTTGTGGCTTCATGATAGAATCACTCTTGCTGCCTCAGTGATACCACTGTAAATTATATTGTTATGTTTTGGTATGACTTATAGAGTATTTGAGAAAACAGTCTATGGTATATTTTATAAACTGTTCATCTCAATTTATGAGTTGTTCATTTCAAGGGATCAAGGTAATTTGACTACCATCATGGCATCAATGGGGGATGCATGCATCAGTAGGTCTTAGTTTATTGTGCTTAATTCTTGATCAAAATTCTTTTATAATAAAAATTTGAATCAAATCCTATTCAAACCCCTTAATTTAAGATTTTTCCCATTTTACACTTTCAGATATTATATTTTAATTCCTAAACCAGAATCCTGATTTAGTTGGTCTTTGTTATGAAATGGAAGAAAAATGTTGAATGTTTTTTATAATTGTCATGAGCATGTCGGACAATCGTTTCAATTGATTTTGCAATTTGTTTGGGTTTCTGTCCTCTTTGTGATCTTCTTTCCAACCCCCCACTCTGGTCTTAAAAAAAAAAAAAAAAAAGAAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTAGATCTGCTTTAGCTCCGTAGATGGCGAGAATGCACCGTCGGGAGAGAGCTTCGAGAAGTGCCTTCATGCCATTAATAAAAGTGACAAAGTAACTGTAGTTGGCATAAACTGTACACCTCCTCACTTTATTGAAGCTCCGATTTGTAAGTTCAAAGAGGTAGGAACTAAATCTCTTAGTGTTGATTTAATATTGTTGTGTTGGTCACTTGTTTTGAAACCGAAATGTTCACTTCAGTTAACCAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGGTGAGTCAACTTAATTCTTCCCTACCCCACTCTGATATTTCATGGCTTGTGGGCCTACATTGCAATATTTCCATTACTAATTAGCGTTCTGGTTTTGGTAGCCATCAAATTGTTTTGTTGATGACAAATTTGAATCATTTAGTTCAAGATGGCGTGATTTGGGAGCAAAATTCATTGGAGGCTGTTGTCGTACGACACCGTCTACCATCCTAGCTATATCAAAGGTTTGGAAAGAAAGCTCCCATTAGTGACCGCCGTCTAATTTTTAACCTTTTTTGTTCTTTTGTAAACTACTAGATTGAGGTGTTATGGTTTGCATTCTGACATAATTTTTTCGGCTTATAGAATTTTACTGCATAAAACTCGGGTAGGCATTTTTACTTCTTCATGAAATTCAACTAAATTGAGGAAAAGAAAACTATTACATTTTCAGAACATATTTTATATTTTATTTCAAAGAATGATAAAAATCTTAGAGAATGGATCCATCAGGACAATGCAAACTTTGGATGCTGAGGCTGATCTTGGAAGTTTATAAGCAAGCAGGAACATAAAAACCAACAGAGTTCCAATCCCTTACTGGATTAGGAAATCTTCTCCTTTTTTTCTGGGAAAAGATAAAAAATGGAGGAACAGTCGTTTATCCTCAAAGTAGACTGAGAGGAAGAAGCCGAAAAGTATGGGATTAGACAGAAGGTAATGGATAATGCAATATTGGGATGGGGGCCCCTAAACAAGATCTCAACTTTTTGTCGAACCAAAAAAAGAAGTGTCCCTTTCTCAATTAGGGTGCCCCACAAATTTACGCAGCCAATCAGAGAACAACCCTTTGGATGAACTATAACCCCTCGACCAATGAAGAAGTGGATAAGACCCTTCTGTGGACCTACCCACTGCAAGTTCTTTTTCTATATTAAACAAGTGCACAAAAGTGCAATTCCTTCTCAGTCTAGACCCTTCTCTGTCGTGGATTTAGCTGGAAAAGCGCAGTCCGAGGGGCATTCCCCAGGTCCCTCCATGGTGTCTAGTTAAAATAGTTTCTCGTGAATATTTATAAAACAACAATGACGAACTAGTAGAAATTATCAGTACAGTGTCCCAATTTGAAGCCTGCAAGTTGTGTTTTTAATACAAACTCACATTTTTAACTGAGTTTCAGTGTATTGACTCTTTATCATTTCTGGTTATTTGAATTTTATGATGCCGAGGAAAAGCGTGCAGAAAACAGCAGAGGGAGGCAAGACCGCCAGACCCTGCGAAAGCTGTATCATCAAGCGGGCTCGGTGGTACTGCGCTGCCGATGATGCTTTTCTGTGCCAAGCTTGTGATGCTTCAGTTCACTCCGCCAACTCCTTGGCTCGTAGGCACGAGCGAGTTCGTCTTCCAACTGTCTCTTACAGACCCTCTTCAGACAACTCCTCTGCTGCTTCATGGCACCAAGGCTTCACCAGAAAGCCACGGTCACCTCGAATGGGAAAGACCGCTCCGATGAGGAAGCCATTTCCTCAGGTACCGGAGGTGAGTGCTAAAGAAGAAACGGAAGATCAAGAACAGCTCCTCCTTTATCGAGTTCCTGAATTGGGAACCGATTCAAAAGTTGGTAATTTGTTTAGTTTTGTTGGGGAAAAAGAAAACTCAAATGGGTATCTCTCGTACCATATGGATCCTGCTGAATTCGCGGCTGATGTTGAGAGTTTGTTGGGGAAGTCGCTTAATAATAAGTGCTTAGATATGGAAGAACTGGGGCTAGCGGCTTCCAAAGATCACTCAACGACAAAGGATGATTACTCTTTAAACAGCCACGAACTTATTAGGATTGAACAAGATGAGATAGAGAAATTGACTCCAATGCTCAGCGCAGAAGCCGATACAATGAGGGAGCCATTTGAACTGAACTTTATGGACTTCGGCAGAAATCCAACGACGTGCGGTGAGGAAAACAAGGTGATGATGGAAGTCAAGGAAGTGGTGAAGAAGGGTGAACTTGAGATGGAAGAGACAAAGATTGTTAACAACAAAAAGAAAGTATCATTGAGTTTAGATAGTGAAGCAGTGATAATGGCTTGGGGGAGCAGAGGAACTCCATGGATGTCCGATGATGGACCGAATCTCGACTTCAATTATCACTGGCTGGACTACATGGTTTGTTCCTTTACCTTCTTTTTCATGTCCAATGAAATTTTTAAGCTTATAATGTTTTGGTATTACAAAAGCTCTCTGAAAGTGAAGTATGTTTCTATGAAGGGTACGTGGGAAAGTGAATATTATTATCAGGCTTTCGGGGAGGTTAGCGGCGGAATCAGGCGACAAGCGGCAGCCGGAGTTGAAGGAGAGAGAGAAGCACGAGTGTCGAGATACAGAGAGAAGAGAAGGACGAGATTATTTGAAAAGAAAATAAGATATGAAGTCCGGAAGCTGAATGCAGAGAAGAGACCGAGAATGAAGGGGAGGTTTGTGAAGAGATCATCTTGCTTTGCGCCGCCACCTTTGCCTCTCTTTAATTAGTCATTAATCTTCAATCATTAATACAATAATCCACTTTTTCAAATTTATTTCATCAATTTTGGGCTGTTAGCGGTCCGCTAGCCCATCAATGCCCAGTAATATGGTCCACTGGTCTATCAATGGGCCTGTGGGCTAGTCCAGTAGTTCGTCAATGGGCTTATGGGCTGGTCAGTAGTCTTATCAATGGGTCAGGTACCCAAACTTTTTGTTGAATAGTTATGCTATTGTATTTAGTTTAAAAAAGAATATATATAAGGTAAGTCATACTCACACCTAACATTGTTTGGAACATAAATGGAGATGCT

mRNA sequence

CTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGAGAAGAAACACGGCGCTGGAGGTTGTGCGGTGATTGATGGAGGTTTCGCTACGCAGCTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCCATTTGGAGTACTTGGAGGCAGGGATAAATATTTTGGTTTCTTCGTCTTACCAGGAGCTGTCCATGGAAGAAGGGGAGTTGCTCTTAGAAAAGAGTGTTAAAATGGAAGCTCGTGATAGTTTTTGGGATTCTGTGAAGAGTGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGTTAACCAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGTTGATGACAAATTTGAATCATTTAGTTCAAGATGGCGTGATTTGGGAGCAAAATTCATTGGAGGCTGTTGTCGTACGACACCGTCTACCATCCTAGCTATATCAAAGGTTTGGAAAGAAAGCTCCCATTAGTGACCGCCGTCTAATTTTTAACCTTTTTTGTTCTTTTGTAAACTACTAGATTGAGGTGTTATGGTTTGCATTCTGACATAATTTTTTCGGCTTATAGAATTTTACTGCATAAAACTCGGGTAGGCATTTTTACTTCTTCATGAAATTCAACTAAATTGAGGAAAAGAAAACTATTACATTTTCAGAACATATTTTATATTTTATTTCAAAGAATGATAAAAATCTTAGAGAATGGATCCATCAGGACAATGCAAACTTTGGATGCTGAGGCTGATCTTGGAAGTTTATAAGCAAGCAGGAACATAAAAACCAACAGAGTTCCAATCCCTTACTGGATTAGGAAATCTTCTCCTTTTTTTCTGGGAAAAGATAAAAAATGGAGGAACAGTCGTTTATCCTCAAAGTAGACTGAGAGGAAGAAGCCGAAAAGTATGGGATTAGACAGAAGGTAATGGATAATGCAATATTGGGATGGGGGCCCCTAAACAAGATCTCAACTTTTTGTCGAACCAAAAAAAGAAGTGTCCCTTTCTCAATTAGGGTGCCCCACAAATTTACGCAGCCAATCAGAGAACAACCCTTTGGATGAACTATAACCCCTCGACCAATGAAGAAGTGGATAAGACCCTTCTGTGGACCTACCCACTGCAAGTTCTTTTTCTATATTAAACAAGTGCACAAAAGTGCAATTCCTTCTCAGTCTAGACCCTTCTCTGTCGTGGATTTAGCTGGAAAAGCGCAGTCCGAGGGGCATTCCCCAGGTCCCTCCATGGTGTCTAGTTAAAATAGTTTCTCGTGAATATTTATAAAACAACAATGACGAACTAGTAGAAATTATCAGTACAGTGTCCCAATTTGAAGCCTGCAAGTTGTGTTTTTAATACAAACTCACATTTTTAACTGAGTTTCAGTGTATTGACTCTTTATCATTTCTGGTTATTTGAATTTTATGATGCCGAGGAAAAGCGTGCAGAAAACAGCAGAGGGAGGCAAGACCGCCAGACCCTGCGAAAGCTGTATCATCAAGCGGGCTCGGTGGTACTGCGCTGCCGATGATGCTTTTCTGTGCCAAGCTTGTGATGCTTCAGTTCACTCCGCCAACTCCTTGGCTCGTAGGCACGAGCGAGTTCGTCTTCCAACTGTCTCTTACAGACCCTCTTCAGACAACTCCTCTGCTGCTTCATGGCACCAAGGCTTCACCAGAAAGCCACGGTCACCTCGAATGGGAAAGACCGCTCCGATGAGGAAGCCATTTCCTCAGGTACCGGAGGTGAGTGCTAAAGAAGAAACGGAAGATCAAGAACAGCTCCTCCTTTATCGAGTTCCTGAATTGGGAACCGATTCAAAAGTTGGTAATTTGTTTAGTTTTGTTGGGGAAAAAGAAAACTCAAATGGGTATCTCTCGTACCATATGGATCCTGCTGAATTCGCGGCTGATGTTGAGAGTTTGTTGGGGAAGTCGCTTAATAATAAGTGCTTAGATATGGAAGAACTGGGGCTAGCGGCTTCCAAAGATCACTCAACGACAAAGGATGATTACTCTTTAAACAGCCACGAACTTATTAGGATTGAACAAGATGAGATAGAGAAATTGACTCCAATGCTCAGCGCAGAAGCCGATACAATGAGGGAGCCATTTGAACTGAACTTTATGGACTTCGGCAGAAATCCAACGACGTGCGGTGAGGAAAACAAGGTGATGATGGAAGTCAAGGAAGTGGTGAAGAAGGGTGAACTTGAGATGGAAGAGACAAAGATTGTTAACAACAAAAAGAAAGTATCATTGAGTTTAGATAGTGAAGCAGTGATAATGGCTTGGGGGAGCAGAGGAACTCCATGGATGTCCGATGATGGACCGAATCTCGACTTCAATTATCACTGGCTGGACTACATGGGTACGTGGGAAAGTGAATATTATTATCAGGCTTTCGGGGAGGTTAGCGGCGGAATCAGGCGACAAGCGGCAGCCGGAGTTGAAGGAGAGAGAGAAGCACGAGTGTCGAGATACAGAGAGAAGAGAAGGACGAGATTATTTGAAAAGAAAATAAGATATGAAGTCCGGAAGCTGAATGCAGAGAAGAGACCGAGAATGAAGGGGAGGTTTGTGAAGAGATCATCTTGCTTTGCGCCGCCACCTTTGCCTCTCTTTAATTAGTCATTAATCTTCAATCATTAATACAATAATCCACTTTTTCAAATTTATTTCATCAATTTTGGGCTGTTAGCGGTCCGCTAGCCCATCAATGCCCAGTAATATGGTCCACTGGTCTATCAATGGGCCTGTGGGCTAGTCCAGTAGTTCGTCAATGGGCTTATGGGCTGGTCAGTAGTCTTATCAATGGGTCAGGTACCCAAACTTTTTGTTGAATAGTTATGCTATTGTATTTAGTTTAAAAAAGAATATATATAAGGTAAGTCATACTCACACCTAACATTGTTTGGAACATAAATGGAGATGCT

Coding sequence (CDS)

CTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGAGAAGAAACACGGCGCTGGAGGTTGTGCGGTGATTGATGGAGGTTTCGCTACGCAGCTTGAGAAACACGGCGCTGTCATTGACGATCCACTTTGGAGCGCCGTTTGCCTCATCAGTGATCATGACCTGATCAAGAAGGTCCATTTGGAGTACTTGGAGGCAGGGATAAATATTTTGGTTTCTTCGTCTTACCAGGAGCTGTCCATGGAAGAAGGGGAGTTGCTCTTAGAAAAGAGTGTTAAAATGGAAGCTCGTGATAGTTTTTGGGATTCTGTGAAGAGTGTGAATGTGGATAAGTTGAAGGATTTTCATCGGCGCAGATTGCAGATTCTTGTTGATGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGTTAACCAACAAGCACATAGTTGTCTATCCCAATAGTGGCGAGGTATGGGATGGCAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGTTGATGACAAATTTGAATCATTTAGTTCAAGATGGCGTGATTTGGGAGCAAAATTCATTGGAGGCTGTTGTCGTACGACACCGTCTACCATCCTAGCTATATCAAAGGTTTGGAAAGAAAGCTCCCATTAG

Protein sequence

LEKHGAVIDDPLWSAVCLISDHDLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQELSMEEGELLLEKSVKMEARDSFWDSVKSVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQLTNKHIVVYPNSGEVWDGRAKKWLPSNCFVDDKFESFSSRWRDLGAKFIGGCCRTTPSTILAISKVWKESSH
Homology
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BLAST of Cp4.1LG01g13650 vs. Swiss-Prot
Match: HMT1_BRAOT (Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica GN=HMT1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.4e-36
Identity = 94/182 (51.65%), Postives = 110/182 (60.44%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLI+K      GGCAV+DGGFATQLE HGA I+DPLWSAV LI D +LIK+VH+EYLEAG
Sbjct: 12  DLIEK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKDPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDK----- 142
            +++V+SSYQ          LSMEE E LL+KSVK+  EARD FWD V   +        
Sbjct: 72  ADVVVTSSYQATIPGFLSRGLSMEESESLLQKSVKLAVEARDRFWDKVSKTSGHSYNRAL 131

Query: 143 -----------LKDFH-------------------RRRLQILVDASPDLLAFETIPNKLE 159
                      L D                     RRR+Q+LV+ASPDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLE 188

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BLAST of Cp4.1LG01g13650 vs. Swiss-Prot
Match: HMT1_MAIZE (Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 81/172 (47.09%), Postives = 101/172 (58.72%), Query Frame = 1 

Query: 33  AGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQ 92
           AGGCAVIDGGFATQLE  GA I+DPLWSA CLI+   L+K+VH++YLEAG ++++SSSYQ
Sbjct: 11  AGGCAVIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQ 70

Query: 93  E---------LSMEEGELLLEKSVKM--EARDS-----------------FWDSVKS--- 152
                     +S+ E E LL  SVK+  EARD                     S+ S   
Sbjct: 71  ATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYNRALVAASIGSYGA 130

Query: 153 ---------------VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ 159
                          +  +KLKDFHRRRLQ+L  A PDL+AFE IPN++EAQ
Sbjct: 131 YLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQ 182

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BLAST of Cp4.1LG01g13650 vs. Swiss-Prot
Match: HMT1_ARATH (Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.1e-27
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLIKK      GGCAV+DGGFATQLE HGA I+DPLWSAV LI + +LIK+VH+EYLEAG
Sbjct: 12  DLIKK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVN 124
            +I+V+SSYQ          LS+EE E LL+KSV++  EARD FW+ V  V+
Sbjct: 72  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVS 118

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BLAST of Cp4.1LG01g13650 vs. Swiss-Prot
Match: SMTA_BRAOT (Selenocysteine Se-methyltransferase OS=Brassica oleracea var. italica GN=SMT PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.0e-26
Identity = 76/181 (41.99%), Postives = 101/181 (55.80%), Query Frame = 1 

Query: 27  KEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINIL 86
           KE     GG A+IDGG AT+LE+HGA ++DPLWSA CL++   LI  VHL+YLEAG +I+
Sbjct: 15  KELLKETGGYAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLIHTVHLDYLEAGADII 74

Query: 87  VSSSYQEL---------SMEEGELLLEKSVKM--EARDS--------------------F 146
            S+SYQ           S+E+ E LL KSV++  EAR +                     
Sbjct: 75  SSASYQATIQGFEAKGYSIEKSESLLRKSVEIACEARSTYYDKCKDDDDKKILKKRPILV 134

Query: 147 WDSVKS------------------VNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLEA 159
             SV S                  + ++ LKDFHRRR+Q+L ++  D++AFETIPNKLEA
Sbjct: 135 AASVGSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLAESGADIIAFETIPNKLEA 194

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BLAST of Cp4.1LG01g13650 vs. Swiss-Prot
Match: SMTA_ASTBI (Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 69/182 (37.91%), Postives = 93/182 (51.10%), Query Frame = 1 

Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AG  AVI GG  T+L++HGA ++DPLWSA CL+S   LI++VHL+YLE G +I++++S
Sbjct: 11  HQAGRAAVIAGGLGTELQRHGADLNDPLWSAKCLLSCPHLIRQVHLDYLENGADIIITAS 70

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDKLKDFH-------- 150
           YQ           S EEGE LL +SV++  EARD ++      + D   D          
Sbjct: 71  YQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPIL 130

Query: 151 -----------------------------------RRRLQILVDASPDLLAFETIPNKLE 159
                                              RR++QIL D+  DLLAFE +PNKLE
Sbjct: 131 IAGSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSGVDLLAFEAVPNKLE 190

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BLAST of Cp4.1LG01g13650 vs. TrEMBL
Match: A0A078D5I0_BRANA (BnaC07g23090D protein OS=Brassica napus GN=BnaC07g23090D PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.4e-65
Identity = 143/248 (57.66%), Postives = 165/248 (66.53%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLI+K      GGCAV+DGGFATQLE HGA I+DPLWSAV LI D +LIK+VH+EYLEAG
Sbjct: 12  DLIEK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKDPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDK----- 142
            +++V+SSYQ          LSMEE E LL+KSVK+  EARD FWD V   +        
Sbjct: 72  ADVVVTSSYQATIPGFLSRGLSMEESEYLLQKSVKLAVEARDRFWDKVSKTSGHSYNRAL 131

Query: 143 -----------LKDFH-------------------RRRLQILVDASPDLLAFETIPNKLE 202
                      L D                     RRR+Q+LV+ASPDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLE 191

Query: 203 AQL-TNKHIVVYPNSGEVWDGRAKKWLPSNCFVDDKFESFSSRWRDLGAKFIGGCCRTTP 224
           AQ    K IVVYPNSGEVWDG+AKKWLPS CF D +FE F+++WRDLGAK IGGCCRTTP
Sbjct: 192 AQAQVKKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMFATKWRDLGAKLIGGCCRTTP 251

[Close]
BLAST of Cp4.1LG01g13650 vs. TrEMBL
Match: A0A0A0KR42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609660 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 111/174 (63.79%), Postives = 117/174 (67.24%), Query Frame = 1 

Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AGGCAVIDGGFATQLEKHGAVI+DPLWSAVCLI+D  LIKKVHLEYLEAG +ILVSSS
Sbjct: 15  HNAGGCAVIDGGFATQLEKHGAVINDPLWSAVCLINDPHLIKKVHLEYLEAGADILVSSS 74

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDKL------------ 150
           YQ          LS+EEGELLLEKSVK+  EARDSFWDSVK +   K             
Sbjct: 75  YQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGHKYNRALVAASIGSY 134

Query: 151 -----------------------KDFHRRRLQILVDASPDLLAFETIPNKLEAQ 159
                                  KDFHRRRLQI VDASPDLLAFETIPNKLEAQ
Sbjct: 135 GAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQ 188

[Close]
BLAST of Cp4.1LG01g13650 vs. TrEMBL
Match: A0A0R0IY33_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G261200 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.2e-41
Identity = 104/174 (59.77%), Postives = 115/174 (66.09%), Query Frame = 1 

Query: 22  HDLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEA 81
           HDLI+      AGGCAV DGGFATQLEKHGA I+DPLWSA+ LI D  LIK+VHLEYLEA
Sbjct: 7   HDLIEN-----AGGCAVTDGGFATQLEKHGASINDPLWSAIYLIKDPHLIKQVHLEYLEA 66

Query: 82  GINILVSSSYQELSMEEGELLLEKSVKM--EARDSFWDSV-------------------- 141
           G +ILV+SSYQ LS+EEGE LLEKSVK+  EARD FW+S                     
Sbjct: 67  GADILVTSSYQGLSIEEGESLLEKSVKLAVEARDGFWNSAIINPGNKYRRALVAASIGSY 126

Query: 142 KSVNVD---------------KLKDFHRRRLQILVDASPDLLAFETIPNKLEAQ 159
            S   D               KLKDFHRRRLQ+LV+A PDLLAFETIPNKLEAQ
Sbjct: 127 GSYLADGSEYSGCYGPDVNLKKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQ 175

[Close]
BLAST of Cp4.1LG01g13650 vs. TrEMBL
Match: A0A151QYK9_CAJCA (Homocysteine S-methyltransferase 1 OS=Cajanus cajan GN=KK1_043567 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.7e-40
Identity = 101/183 (55.19%), Postives = 118/183 (64.48%), Query Frame = 1 

Query: 22  HDLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEA 81
           HDLI+      AGGCAV DGGFATQLEKHGA I+D LWSA+ LI D  LIK+VH+EYLEA
Sbjct: 10  HDLIEN-----AGGCAVTDGGFATQLEKHGAFINDALWSAIYLIKDPQLIKQVHVEYLEA 69

Query: 82  GINILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVK---------- 141
           G +ILV+SSYQ          LS+EEGE LLE+SVK+  EARD+FW+SVK          
Sbjct: 70  GADILVTSSYQATLPGFSSKGLSIEEGESLLERSVKLAVEARDNFWNSVKRNSGNRYRRA 129

Query: 142 -------------------------SVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKL 159
                                     VN+ +LKDFHRRRLQ+L++A PDLLAFETIPNKL
Sbjct: 130 LVAASIGSYGAYLADGSEYSGCYGPDVNLKELKDFHRRRLQVLIEAGPDLLAFETIPNKL 187

[Close]
BLAST of Cp4.1LG01g13650 vs. TrEMBL
Match: A0A022QPX2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009832mg PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.8e-39
Identity = 99/182 (54.40%), Postives = 116/182 (63.74%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DL++K     AGGCAV+DGGFATQLE+HGA+I+DPLWSA+CLI D  LI KVHLEYLEAG
Sbjct: 15  DLLEK-----AGGCAVVDGGFATQLERHGALINDPLWSALCLIKDPHLITKVHLEYLEAG 74

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVK----------- 142
            +++V+SSYQ          LSMEE E LL KSV++  EARD FW SVK           
Sbjct: 75  ADVIVTSSYQATIPGFLSRGLSMEEAESLLTKSVQIAAEARDKFWASVKWKPENNHNRAL 134

Query: 143 ------------------------SVNVDKLKDFHRRRLQILVDASPDLLAFETIPNKLE 159
                                   +V ++KLKDFHR RLQ+LV A PDLLAFETIPNKLE
Sbjct: 135 IAASIGSYGAYLADGSEYSGNYGPTVTLEKLKDFHRHRLQVLVQAGPDLLAFETIPNKLE 191

[Close]
BLAST of Cp4.1LG01g13650 vs. TAIR10
Match: AT3G25900.1 (AT3G25900.1 Homocysteine S-methyltransferase family protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.4e-28
Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLIKK      GGCAV+DGGFATQLE HGA I+DPLWSAV LI + +LIK+VH+EYLEAG
Sbjct: 12  DLIKK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVN 124
            +I+V+SSYQ          LS+EE E LL+KSV++  EARD FW+ V  V+
Sbjct: 72  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVS 118

[Close]
BLAST of Cp4.1LG01g13650 vs. TAIR10
Match: AT3G22740.1 (AT3G22740.1 homocysteine S-methyltransferase 3)

HSP 1 Score: 104.4 bits (259), Expect = 9.7e-23
Identity = 70/178 (39.33%), Postives = 93/178 (52.25%), Query Frame = 1 

Query: 34  GGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQE 93
           GG AV+DGGFAT+L++HGA I+DPLWSA CLI+   L+ KVHL+YLE+G NI++++SYQ 
Sbjct: 21  GGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQA 80

Query: 94  ---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDKLKDFHRRRLQILVDAS 153
                    LS+ E E LL +SV++  EAR+ F++     + D        R  ILV AS
Sbjct: 81  TIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAAS 140

Query: 154 ------------------------------------------PDLLAFETIPNKLEAQ 159
                                                      DL+AFETIPNKLEA+
Sbjct: 141 VGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAFETIPNKLEAE 198

[Close]
BLAST of Cp4.1LG01g13650 vs. TAIR10
Match: AT3G63250.1 (AT3G63250.1 homocysteine methyltransferase 2)

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-20
Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 1 

Query: 34  GGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSSYQE 93
           GG AVIDGG AT+ E+HGA ++DPLWSA CL++   LI  VHL+YLEAG +I+ S+SYQ 
Sbjct: 17  GGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQA 76

Query: 94  ---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDKLKDFHRRRLQILVDAS 143
                     S EE E LL+KSV++  EAR+S++D  K      + D   ++  ILV AS
Sbjct: 77  TIQGFEAKGFSREESESLLKKSVEIATEARNSYYD--KCGTSSSMDDKILKKRPILVAAS 134

[Close]
BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: gi|674949786|emb|CDX83569.1| (BnaC07g23090D [Brassica napus])

HSP 1 Score: 257.7 bits (657), Expect = 1.9e-65
Identity = 143/248 (57.66%), Postives = 165/248 (66.53%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLI+K      GGCAV+DGGFATQLE HGA I+DPLWSAV LI D +LIK+VH+EYLEAG
Sbjct: 12  DLIEK-----CGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKDPELIKRVHMEYLEAG 71

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDK----- 142
            +++V+SSYQ          LSMEE E LL+KSVK+  EARD FWD V   +        
Sbjct: 72  ADVVVTSSYQATIPGFLSRGLSMEESEYLLQKSVKLAVEARDRFWDKVSKTSGHSYNRAL 131

Query: 143 -----------LKDFH-------------------RRRLQILVDASPDLLAFETIPNKLE 202
                      L D                     RRR+Q+LV+ASPDLLAFETIPNKLE
Sbjct: 132 VAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFETIPNKLE 191

Query: 203 AQL-TNKHIVVYPNSGEVWDGRAKKWLPSNCFVDDKFESFSSRWRDLGAKFIGGCCRTTP 224
           AQ    K IVVYPNSGEVWDG+AKKWLPS CF D +FE F+++WRDLGAK IGGCCRTTP
Sbjct: 192 AQAQVKKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMFATKWRDLGAKLIGGCCRTTP 251

[Close]
BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: gi|719968069|ref|XP_010263693.1| (PREDICTED: homocysteine S-methyltransferase 1-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 218.8 bits (556), Expect = 1.0e-53
Identity = 138/296 (46.62%), Postives = 169/296 (57.09%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLI++     AGGCA++DGGFATQLEKHGA I+DPLWSA+CLI D +L+K+VHLEYLEAG
Sbjct: 18  DLIER-----AGGCAIVDGGFATQLEKHGASINDPLWSALCLIKDPELVKRVHLEYLEAG 77

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDK----- 142
            +ILV+SSYQ          LS+EEGE LL+KSVK+  EARD FWD V+S+         
Sbjct: 78  ADILVTSSYQATIPGFLSRGLSIEEGEALLQKSVKLAVEARDKFWDEVQSIPGHSYNRAL 137

Query: 143 -----------LKD-------------------FHRRRLQILVDASPDLLAFETIPNKLE 202
                      L D                   FHRRRLQ+LV+A PDLLAFETIPNK+E
Sbjct: 138 VAASIGSYGAYLADGSEYSGRYGPDVTLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKIE 197

Query: 203 AQ----LTNKHIVVYPN-------------SGEVWD------GRAKK------------- 229
           AQ    L ++  +  P+             SGE ++       ++KK             
Sbjct: 198 AQACAELLDEENIQIPSWICFSSVDGENAPSGENFEECLGIINKSKKVNAVGINCAPPHF 257

[Close]
BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: gi|449434616|ref|XP_004135092.1| (PREDICTED: homocysteine S-methyltransferase 1 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 2.2e-45
Identity = 111/174 (63.79%), Postives = 117/174 (67.24%), Query Frame = 1 

Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AGGCAVIDGGFATQLEKHGAVI+DPLWSAVCLI+D  LIKKVHLEYLEAG +ILVSSS
Sbjct: 15  HNAGGCAVIDGGFATQLEKHGAVINDPLWSAVCLINDPHLIKKVHLEYLEAGADILVSSS 74

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDKL------------ 150
           YQ          LS+EEGELLLEKSVK+  EARDSFWDSVK +   K             
Sbjct: 75  YQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGHKYNRALVAASIGSY 134

Query: 151 -----------------------KDFHRRRLQILVDASPDLLAFETIPNKLEAQ 159
                                  KDFHRRRLQI VDASPDLLAFETIPNKLEAQ
Sbjct: 135 GAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQ 188

[Close]
BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: gi|719968066|ref|XP_010263685.1| (PREDICTED: homocysteine S-methyltransferase 1-like isoform X1 [Nelumbo nucifera])

HSP 1 Score: 185.7 bits (470), Expect = 9.4e-44
Identity = 132/320 (41.25%), Postives = 162/320 (50.62%), Query Frame = 1 

Query: 23  DLIKKEKKHGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAG 82
           DLI++     AGGCA++DGGFATQLEKHGA I+DPLWSA+CLI D +L+K+VHLEYLEAG
Sbjct: 18  DLIER-----AGGCAIVDGGFATQLEKHGASINDPLWSALCLIKDPELVKRVHLEYLEAG 77

Query: 83  INILVSSSYQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSVNVDK----- 142
            +ILV+SSYQ          LS+EEGE LL+KSVK+  EARD FWD V+S+         
Sbjct: 78  ADILVTSSYQATIPGFLSRGLSIEEGEALLQKSVKLAVEARDKFWDEVQSIPGHSYNRAL 137

Query: 143 -----------LKD-------------------FHRRRLQILVDASPDLLAFETIPNKLE 202
                      L D                   FHRRRLQ+LV+A PDLLAFETIPNK+E
Sbjct: 138 VAASIGSYGAYLADGSEYSGRYGPDVTLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKIE 197

Query: 203 AQ----LTNKHIVVYPN-------------SGEVWD------GRAKK--WLPSNCFVDDK 229
           AQ    L ++  +  P+             SGE ++       ++KK   +  NC     
Sbjct: 198 AQACAELLDEENIQIPSWICFSSVDGENAPSGENFEECLGIINKSKKVNAVGINCAPPHF 257

[Close]
BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match: gi|659091539|ref|XP_008446599.1| (PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43
Identity = 109/174 (62.64%), Postives = 119/174 (68.39%), Query Frame = 1 

Query: 31  HGAGGCAVIDGGFATQLEKHGAVIDDPLWSAVCLISDHDLIKKVHLEYLEAGINILVSSS 90
           H AGGCAVIDGG ATQLEKHGAV +DPLWSAVCLI+D DLIKKVHLEYLEAG +ILV+SS
Sbjct: 15  HNAGGCAVIDGGLATQLEKHGAVFNDPLWSAVCLINDPDLIKKVHLEYLEAGADILVTSS 74

Query: 91  YQE---------LSMEEGELLLEKSVKM--EARDSFWDSVKSV---NVDK---------- 150
           YQ          LS+EEGELLLEKSVK+  EARDSFWDSVK +   N ++          
Sbjct: 75  YQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGHNYNRALVAASIGSY 134

Query: 151 ---LKD-------------------FHRRRLQILVDASPDLLAFETIPNKLEAQ 159
              L D                   FHRRRL+ILVDASPDLLAFETIPNKLEAQ
Sbjct: 135 GAYLADGSEYSGHYGPDVNVDKLKDFHRRRLRILVDASPDLLAFETIPNKLEAQ 188

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g13650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HMT1_BRAOT9.4e-3651.65Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica GN=HMT1 PE=... [more]
HMT1_MAIZE2.0e-3047.09Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1[more]
HMT1_ARATH6.1e-2759.82Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1 PE=1 SV=1[more]
SMTA_BRAOT4.0e-2641.99Selenocysteine Se-methyltransferase OS=Brassica oleracea var. italica GN=SMT PE=... [more]
SMTA_ASTBI3.5e-2237.91Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA PE=1 SV=1[more]
BLAST of Cp4.1LG01g13650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A078D5I0_BRANA1.4e-6557.66BnaC07g23090D protein OS=Brassica napus GN=BnaC07g23090D PE=4 SV=1[more]
A0A0A0KR42_CUCSA1.6e-4563.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609660 PE=4 SV=1[more]
A0A0R0IY33_SOYBN5.2e-4159.77Uncharacterized protein OS=Glycine max GN=GLYMA_08G261200 PE=4 SV=1[more]
A0A151QYK9_CAJCA5.7e-4055.19Homocysteine S-methyltransferase 1 OS=Cajanus cajan GN=KK1_043567 PE=4 SV=1[more]
A0A022QPX2_ERYGU2.8e-3954.40Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a009832mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g13650 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25900.13.4e-2859.82 Homocysteine S-methyltransferase family protein[more]
AT3G22740.19.7e-2339.33 homocysteine S-methyltransferase 3[more]
AT3G63250.13.5e-2048.33 homocysteine methyltransferase 2[more]
BLAST of Cp4.1LG01g13650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|674949786|emb|CDX83569.1|1.9e-6557.66BnaC07g23090D [Brassica napus][more]
gi|719968069|ref|XP_010263693.1|1.0e-5346.62PREDICTED: homocysteine S-methyltransferase 1-like isoform X2 [Nelumbo nucifera][more]
gi|449434616|ref|XP_004135092.1|2.2e-4563.79PREDICTED: homocysteine S-methyltransferase 1 [Cucumis sativus][more]
gi|719968066|ref|XP_010263685.1|9.4e-4441.25PREDICTED: homocysteine S-methyltransferase 1-like isoform X1 [Nelumbo nucifera][more]
gi|659091539|ref|XP_008446599.1|4.7e-4362.64PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003726HCY_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0006566 threonine metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016740 transferase activity
molecular_function GO:0047150 betaine-homocysteine S-methyltransferase activity
molecular_function GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13650.1Cp4.1LG01g13650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003726Homocysteine-binding domainGENE3DG3DSA:3.20.20.330coord: 160..227
score: 2.5E-16coord: 34..92
score: 1.9E-15coord: 121..158
score: 4.
IPR003726Homocysteine-binding domainPFAMPF02574S-methyl_transcoord: 38..159
score: 4.9E-18coord: 162..223
score: 3.0
IPR003726Homocysteine-binding domainunknownSSF82282Homocysteine S-methyltransferasecoord: 33..227
score: 2.09
NoneNo IPR availablePANTHERPTHR21091METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATEDcoord: 23..224
score: 2.0
NoneNo IPR availablePANTHERPTHR21091:SF114HOMOCYSTEINE S-METHYLTRANSFERASE 3coord: 23..224
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g13650Cucsa.283580Cucumber (Gy14) v1cgycpeB0750
Cp4.1LG01g13650CmaCh18G010210Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g13650CmaCh04G015090Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g13650CmoCh18G010310Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g13650CmoCh04G015790Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g13650Cla020396Watermelon (97103) v1cpewmB427
Cp4.1LG01g13650Csa5G609660Cucumber (Chinese Long) v2cpecuB439
Cp4.1LG01g13650MELO3C012247Melon (DHL92) v3.5.1cpemeB363
Cp4.1LG01g13650CSPI05G25260Wild cucumber (PI 183967)cpecpiB439
Cp4.1LG01g13650Lsi04G002540Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g13650MELO3C012247.2Melon (DHL92) v3.6.1cpemedB423
Cp4.1LG01g13650CsaV3_5G034310Cucumber (Chinese Long) v3cpecucB0543
Cp4.1LG01g13650Bhi07G001105Wax gourdcpewgoB0557
Cp4.1LG01g13650Carg01840Silver-seed gourdcarcpeB1177
Cp4.1LG01g13650Carg21590Silver-seed gourdcarcpeB1452
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g13650Cp4.1LG09g02920Cucurbita pepo (Zucchini)cpecpeB040
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g13650Cucurbita pepo (Zucchini)cpecpeB205
Cp4.1LG01g13650Cucurbita pepo (Zucchini)cpecpeB399
Cp4.1LG01g13650Cucurbita maxima (Rimu)cmacpeB323
Cp4.1LG01g13650Cucurbita maxima (Rimu)cmacpeB737
Cp4.1LG01g13650Cucurbita moschata (Rifu)cmocpeB115
Cp4.1LG01g13650Cucurbita moschata (Rifu)cmocpeB285
Cp4.1LG01g13650Cucurbita moschata (Rifu)cmocpeB691
Cp4.1LG01g13650Wild cucumber (PI 183967)cpecpiB381
Cp4.1LG01g13650Cucumber (Chinese Long) v2cpecuB381
Cp4.1LG01g13650Bottle gourd (USVL1VR-Ls)cpelsiB371
Cp4.1LG01g13650Watermelon (Charleston Gray)cpewcgB388
Cp4.1LG01g13650Watermelon (Charleston Gray)cpewcgB401
Cp4.1LG01g13650Watermelon (97103) v1cpewmB470
Cp4.1LG01g13650Melon (DHL92) v3.5.1cpemeB395
Cp4.1LG01g13650Cucumber (Gy14) v2cgybcpeB063
Cp4.1LG01g13650Cucumber (Gy14) v2cgybcpeB648
Cp4.1LG01g13650Melon (DHL92) v3.6.1cpemedB458
Cp4.1LG01g13650Cucumber (Chinese Long) v3cpecucB0474
Cp4.1LG01g13650Wax gourdcpewgoB0514