Carg21590 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21590
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Homocysteine S-methyltransferase family protein
Location	Cucurbita_argyrosperma_scaffold_118 : 378815 .. 381344 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCAGGAGTTTTAGAAAGCGAGAATCTGAGAGCAAAGGCGTCCACGTTCAGACTCGAGAGACATAGCGACAATATCCATATTCGGTTTGTCGCGCAATCCGTTTCTCCTTGATCGCCGGCGGTAATTGCGTATCGAAGATCGAAGGAACGAAGAAGAAGAAGATGGGGATGAAGAAGGCGACGACATTGTTGGATGATCTGATACAGAACGCGGGAGGTTGTGCGGTCATTGATGGAGGTTTGGCCACGCAGCTTGAGAAACACGGCGCTGTCTTTAACGATTCGCTTTGGAGTGCTGTTTGCCTCGTTAAAGATCCCGACCTAATTAAGAAGGTTCTCTCTTACCGTCTCTGTTTTTTTTTTTTTTTTCCTCTTCTTTTTGTTTTGTTGATGGTGCATCACGATCTCGTCGGCAATTATTGATTCGATTGCATGTGTAGGTCCATTTGGAGTATTTGGAGGCTGGAGCAGATATTTTGGTTTCTTCCTCTTATCAGGTTTGTACTGCGAATGGATTGAGCTTTCTTTACTGTTTTATCGACTGTAAACATGAATAGTTTTGTACAATGCACTTTATGACGGCTTTTGCAGTACCTTTTTCTTTAAAACGTTGTACTGTGGTTTGTTTAAACATCGATGATGTTATTTAGTTATTTTAAGGCTAATTAGCAGAATGCATGGGGGGTTCAAAACTAGCATTTCTATCCTGTCGTGAAATGATGAACCAAAATGGAACCGGTATTAGCAGTATTCACTTACTCTTTCTTGTCATGCATTACTAACAATATGTACCAGTATTCACTTACTCTTTCTTGTCATGCATTTTATTCTATTCAGGCCACCATTCCAGGGTTTTTATCAAAGGGTCTGTCAGCAGAAGAAGGGGAGTTGCTCTTAGAAAGGAGTGTTAAATTGGCCGTGGAAGCTCGGGATAGCTTCTGGGATTCTGTGAAGAGTAACCCAGGGTATAATTACAATAGGGCTTTGGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCGGAGTACAGGTGACTGACACATTGAATATTGAAATAAGGAGTTTGTAAATGTATGGCTTTCGAACTAAATATATTACCCCCACCCAATCAGTGGGCATTATGGACCAGATGTGGATGTGGATACGCTGAAGTATTTTCATCGACGCCGATTGCAGATTCTTGTCGGTGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGTTTGTTTGTTGTTAACACTTGTTATATCATCTAAGCTGTGGTTTAATAATACTAGACTCACTCTAATGCCGTCCTGATGATTTCACTGCAACTTATATTCTTATGGTTTGATCTAAGTCATAAAATATCTGAGGAAGCAAATTAAGTATATTTTTAAATCCGTTCGTCTGAATTTACAAGTTGTTCATTTCAAGGGATCAAGACAATTTGACAATCGGCATGGCATCGCCACGCCAATGGGGCTTCCATTGCATGATCTGGTCTCAAATCGTTAACTTCTGAATTTGTTGTCTTCTTTATCATGAATATCTTTTTATAATTTAAATGTGGTTTAAATCCTTTGTTTTAAAACTTATTCCAATTTGCTTATTTTACTTTCAGATATTCTATTTAATTCTCAAACTAGAATAACAACACTTCATTTAGTTGGTCCCGATTGTCACAACATACTAACGTTGAATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTGCTGTCGTGAGCATGTGAGGACATTTGTTTCAATTGGTTATCCAATTTTCATTATTTTCTCTCCTCTTGGTAATCATGTTTCCAACTAAACTTACCTCTATTCCCCCCTCCCTTTCTGATCTAACTCAAAAAATTAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTGGATCTGCTTTAGCTCTGTAGATGGTGAGAATGCCCCATCTGGAGAGAGCTTTGAGGAGTGTCTAAAGGCTATTAATAAAAGTGACAAAGTAAATGCAGTTGGAATAAACTGTACACCTCCTCATTTTATTGAAGCTCTCATTTGTAAGTTCAAAGAGGTAGGAACCAAATCTCTCACAGCTGTGATTTGATATCGTTTTCGTGTTCACTGGTTTTGACACCATAATATTCCCTTCAGTTAACAGACAAGCCCATAGTTGTTTATCCTAATAGTGGCGAGGTATGGGATGGTAGAGCCAAGAAATGGCTGGTGAGTCAAATGATTTTCCCCACCCCCACTTTGATATTTTCATGGCTTGTGGGCCTACATTGTGATATTTCCAGAAGACTATAACTAATGTAATGCTCTGTTTTTTTGGTAGCCATCAAATTGTTTTGGTGATGACAAATTTGAATCACTTAGTTCAAGATGGCGTGATTTGGGAGCCAAATTCATTGGTGGCTGTTGTCGAACAACACCATCTACCATCCGAGCGGTATCAAAGGTTTTGAAAGAAAGCCCTCATTAGTGACAGCTGAGTAAGTCAACTGTCTGT

mRNA sequence

GCGCAGGAGTTTTAGAAAGCGAGAATCTGAGAGCAAAGGCGTCCACGTTCAGACTCGAGAGACATAGCGACAATATCCATATTCGGTTTGTCGCGCAATCCGTTTCTCCTTGATCGCCGGCGGTAATTGCGTATCGAAGATCGAAGGAACGAAGAAGAAGAAGATGGGGATGAAGAAGGCGACGACATTGTTGGATGATCTGATACAGAACGCGGGAGGTTGTGCGGTCATTGATGGAGGTTTGGCCACGCAGCTTGAGAAACACGGCGCTGTCTTTAACGATTCGCTTTGGAGTGCTGTTTGCCTCGTTAAAGATCCCGACCTAATTAAGAAGGTCCATTTGGAGTATTTGGAGGCTGGAGCAGATATTTTGGTTTCTTCCTCTTATCAGGCCACCATTCCAGGGTTTTTATCAAAGGGTCTGTCAGCAGAAGAAGGGGAGTTGCTCTTAGAAAGGAGTGTTAAATTGGCCGTGGAAGCTCGGGATAGCTTCTGGGATTCTGTGAAGAGTAACCCAGGGTATAATTACAATAGGGCTTTGGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCGGAGTACAGTGGGCATTATGGACCAGATGTGGATGTGGATACGCTGAAGTATTTTCATCGACGCCGATTGCAGATTCTTGTCGGTGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTGGATCTGCTTTAGCTCTGTAGATGGTGAGAATGCCCCATCTGGAGAGAGCTTTGAGGAGTGTCTAAAGGCTATTAATAAAAGTGACAAAGTAAATGCAGTTGGAATAAACTGTACACCTCCTCATTTTATTGAAGCTCTCATTTGTAAGTTCAAAGAGTTAACAGACAAGCCCATAGTTGTTTATCCTAATAGTGGCGAGGTATGGGATGGTAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGGTGATGACAAATTTGAATCACTTAGTTCAAGATGGCGTGATTTGGGAGCCAAATTCATTGGTGGCTGTTGTCGAACAACACCATCTACCATCCGAGCGGTATCAAAGGTTTTGAAAGAAAGCCCTCATTAGTGACAGCTGAGTAAGTCAACTGTCTGT

Coding sequence (CDS)

ATGGGGATGAAGAAGGCGACGACATTGTTGGATGATCTGATACAGAACGCGGGAGGTTGTGCGGTCATTGATGGAGGTTTGGCCACGCAGCTTGAGAAACACGGCGCTGTCTTTAACGATTCGCTTTGGAGTGCTGTTTGCCTCGTTAAAGATCCCGACCTAATTAAGAAGGTCCATTTGGAGTATTTGGAGGCTGGAGCAGATATTTTGGTTTCTTCCTCTTATCAGGCCACCATTCCAGGGTTTTTATCAAAGGGTCTGTCAGCAGAAGAAGGGGAGTTGCTCTTAGAAAGGAGTGTTAAATTGGCCGTGGAAGCTCGGGATAGCTTCTGGGATTCTGTGAAGAGTAACCCAGGGTATAATTACAATAGGGCTTTGGTTGCAGCATCCATTGGAAGCTATGGTGCTTATCTTGCTGATGGCTCGGAGTACAGTGGGCATTATGGACCAGATGTGGATGTGGATACGCTGAAGTATTTTCATCGACGCCGATTGCAGATTCTTGTCGGTGCAAGCCCAGATTTGCTTGCATTTGAGACTATTCCCAATAAACTTGAAGCCCAGGCCTGTGTGGAGTTGCTCGAAGAAGAAAACGTCCAAATTCCATCTTGGATCTGCTTTAGCTCTGTAGATGGTGAGAATGCCCCATCTGGAGAGAGCTTTGAGGAGTGTCTAAAGGCTATTAATAAAAGTGACAAAGTAAATGCAGTTGGAATAAACTGTACACCTCCTCATTTTATTGAAGCTCTCATTTGTAAGTTCAAAGAGTTAACAGACAAGCCCATAGTTGTTTATCCTAATAGTGGCGAGGTATGGGATGGTAGAGCCAAGAAATGGCTGCCATCAAATTGTTTTGGTGATGACAAATTTGAATCACTTAGTTCAAGATGGCGTGATTTGGGAGCCAAATTCATTGGTGGCTGTTGTCGAACAACACCATCTACCATCCGAGCGGTATCAAAGGTTTTGAAAGAAAGCCCTCATTAG

Protein sequence

MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGYNYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGINCTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDLGAKFIGGCCRTTPSTIRAVSKVLKESPH

Homology

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BLAST of Carg21590 vs. NCBI nr
Match: XP_022945567.1 (homocysteine S-methyltransferase 1 [Cucurbita moschata])

HSP 1 Score: 672.5 bits (1734), Expect = 7.0e-190
Identity = 325/328 (99.09%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MGMKKATTLLDDLIQNAGGC VIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL
Sbjct: 1   MGMKKATTLLDDLIQNAGGCVVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAG+DILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPG+
Sbjct: 61  EYLEAGSDILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET
Sbjct: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN
Sbjct: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL
Sbjct: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 329
           GAKFIGGCCRTTPSTIRAVSKVLKESPH
Sbjct: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 328

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BLAST of Carg21590 vs. NCBI nr
Match: XP_023541078.1 (homocysteine S-methyltransferase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 669.8 bits (1727), Expect = 4.6e-189
Identity = 325/328 (99.09%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL
Sbjct: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPG+
Sbjct: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLK FHRRRLQILVGASPDLLAFET
Sbjct: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKDFHRRRLQILVGASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECL+AINKSDKVNAVGIN
Sbjct: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLQAINKSDKVNAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL
Sbjct: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 329
           GAKFIGGCCRTTPSTIRAVSKVLKESPH
Sbjct: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 328

[Close]

BLAST of Carg21590 vs. NCBI nr
Match: XP_022968494.1 (homocysteine S-methyltransferase 1-like [Cucurbita maxima])

HSP 1 Score: 662.5 bits (1708), Expect = 7.3e-187
Identity = 322/328 (98.17%), Postives = 325/328 (99.09%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MGMKKA TLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL
Sbjct: 1   MGMKKAMTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPG+
Sbjct: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLK FHRRRLQILVGASPDLLAFET
Sbjct: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKDFHRRRLQILVGASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEENVQI SWICFSSVDGENAPSGESFEECL+AINKSDKVNAVGIN
Sbjct: 181 IPNKLEAQACVELLEEENVQILSWICFSSVDGENAPSGESFEECLQAINKSDKVNAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLS+RWRDL
Sbjct: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSARWRDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 329
           GAKFIGGCCRTTPSTIRAVSKVLKESPH
Sbjct: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 328

[Close]

BLAST of Carg21590 vs. NCBI nr
Match: XP_022150665.1 (homocysteine S-methyltransferase 1 [Momordica charantia])

HSP 1 Score: 623.6 bits (1607), Expect = 3.7e-175
Identity = 301/326 (92.33%), Postives = 313/326 (96.01%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           M MKKATTLLDDLI+NAGGCAVIDGG ATQLEKHGAV ND LWSAVCL+KDPDLIKKVHL
Sbjct: 1   MVMKKATTLLDDLIENAGGCAVIDGGFATQLEKHGAVINDPLWSAVCLIKDPDLIKKVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADI+VSSSYQATIPGFLSKGLS EEGELLLE+SVKLAVEARDSFW+SVKS PG+
Sbjct: 61  EYLEAGADIVVSSSYQATIPGFLSKGLSTEEGELLLEKSVKLAVEARDSFWNSVKSIPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
            YNRALVAASIGSYGAYLADGSEYSG+YGPDV+VD LK FHRRRLQ+LV A PDLLAFET
Sbjct: 121 KYNRALVAASIGSYGAYLADGSEYSGNYGPDVNVDKLKDFHRRRLQVLVNACPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEENVQIPSWICFSSVDG+NAPSGESFEECL+AINKS+KVNAVGIN
Sbjct: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGKNAPSGESFEECLRAINKSNKVNAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFES SSRWRDL
Sbjct: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESFSSRWRDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKES 327
           GAKFIGGCCRTTPST RAVSKVLKES
Sbjct: 301 GAKFIGGCCRTTPSTTRAVSKVLKES 326

[Close]

BLAST of Carg21590 vs. NCBI nr
Match: XP_008446599.1 (PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo])

HSP 1 Score: 612.8 bits (1579), Expect = 6.6e-172
Identity = 296/328 (90.24%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MG++KATTLLDDL+ NAGGCAVIDGGLATQLEKHGAVFND LWSAVCL+ DPDLIKKVHL
Sbjct: 1   MGIEKATTLLDDLLHNAGGCAVIDGGLATQLEKHGAVFNDPLWSAVCLINDPDLIKKVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADILV+SSYQATIPGF+SKGLS EEGELLLE+SVKLA+EARDSFWDSVK  PG+
Sbjct: 61  EYLEAGADILVTSSYQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           NYNRALVAASIGSYGAYLADGSEYSGHYGPDV+VD LK FHRRRL+ILV ASPDLLAFET
Sbjct: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVNVDKLKDFHRRRLRILVDASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFE+CL AINKSDKVNAVGIN
Sbjct: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           CTPPHFIEALI KFKELT+K IVVYPNSGEVWDGR KKWLPSNCFGDDKFES +SRW  L
Sbjct: 241 CTPPHFIEALITKFKELTNKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFESFTSRWCKL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 329
           GA FIGGCCRTTPSTIRAVSKVLKES H
Sbjct: 301 GATFIGGCCRTTPSTIRAVSKVLKESSH 328

[Close]

BLAST of Carg21590 vs. TAIR10
Match: AT3G25900.1 (Homocysteine S-methyltransferase family protein)

HSP 1 Score: 514.6 bits (1324), Expect = 4.4e-146
Identity = 242/324 (74.69%), Postives = 280/324 (86.42%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           M ++K + LL+DLI+  GGCAV+DGG ATQLE HGA  ND LWSAV L+K+P+LIK+VH+
Sbjct: 1   MVLEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHM 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADI+V+SSYQATIPGFLS+GLS EE E LL++SV+LAVEARD FW+ V    G+
Sbjct: 61  EYLEAGADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           +YNRALVAASIGSYGAYLADGSEYSGHYG +V +D LK FHRRRLQ+LV A PDLLAFET
Sbjct: 121 SYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEE VQIP+WICF+SVDGE APSGESFEECL+ +NKS+ + AVGIN
Sbjct: 181 IPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           C PP FIE LI KF +LT K IVVYPNSGEVWDG+AK+WLPS CFGDD+FE  +++WRDL
Sbjct: 241 CAPPQFIENLIRKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLK 325
           GAK IGGCCRTTPSTI A+S+ LK
Sbjct: 301 GAKLIGGCCRTTPSTINAISRDLK 324

[Close]

BLAST of Carg21590 vs. TAIR10
Match: AT3G22740.1 (homocysteine S-methyltransferase 3)

HSP 1 Score: 378.3 bits (970), Expect = 5.0e-105
Identity = 181/331 (54.68%), Postives = 238/331 (71.90%), Query Frame = 0


Query: 4   KKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYL 63
           ++ ++L+ D ++  GG AV+DGG AT+L++HGA  ND LWSA CL+  P L+ KVHL+YL
Sbjct: 7   EETSSLMTDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYL 66

Query: 64  EAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWD-SVKSNPGYNY 123
           E+GA+I++++SYQATI GF++KGLS  E E LL RSV++  EAR+ F++   K +  + Y
Sbjct: 67  ESGANIIITASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAY 126

Query: 124 ------NRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLL 183
                    LVAAS+GSYGAYLADGSEYSG YG  V  +TLK FHRRR+QIL  +  DL+
Sbjct: 127 AGKASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLI 186

Query: 184 AFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNA 243
           AFETIPNKLEA+A  +LLEEE++ IP+W  F+S DG + P G+S  EC K  +    V A
Sbjct: 187 AFETIPNKLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNVVA 246

Query: 244 VGINCTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSR 303
           +GINCT P +I ALI   +++T KPIVVYPNSGEV+DG  KKW+ S    ++ F S  S+
Sbjct: 247 IGINCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYVSK 306

Query: 304 WRDLGAKFIGGCCRTTPSTIRAVSKVLKESP 328
           WRD GA   GGCCRTTP+TIRA++KVL + P
Sbjct: 307 WRDAGASLFGGCCRTTPNTIRAIAKVLSDEP 337

[Close]

BLAST of Carg21590 vs. TAIR10
Match: AT3G63250.1 (homocysteine methyltransferase 2)

HSP 1 Score: 369.8 bits (948), Expect = 1.8e-102
Identity = 178/319 (55.80%), Postives = 228/319 (71.47%), Query Frame = 0


Query: 10  LDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYLEAGADI 69
           + D ++  GG AVIDGGLAT+ E+HGA  ND LWSA CLV  P LI  VHL+YLEAGADI
Sbjct: 9   MKDFLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADI 68

Query: 70  LVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGYN-----YNR 129
           + S+SYQATI GF +KG S EE E LL++SV++A EAR+S++D   ++   +        
Sbjct: 69  ISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRP 128

Query: 130 ALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFETIPNK 189
            LVAAS+GSYGAYLADGSEYSG YG  + ++ LK FHRRRLQ+L  +  DL+AFETIPNK
Sbjct: 129 ILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNK 188

Query: 190 LEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGINCTPP 249
           +EAQA  +LLEE +V+IP W  F+S DG N  SG+S +EC+      +KV AVGINCTPP
Sbjct: 189 IEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPP 248

Query: 250 HFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDLGAKF 309
            FIE L+ + +++T KPI+VYPNSGE +D   K+W+ +   GD+ F S   +W D G   
Sbjct: 249 RFIEGLVLEIEKVTSKPILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEKWMDAGVSL 308

Query: 310 IGGCCRTTPSTIRAVSKVL 324
           +GGCCRTTP+TIRA+ K L
Sbjct: 309 LGGCCRTTPTTIRAIHKRL 327

[Close]

BLAST of Carg21590 vs. Swiss-Prot
Match: sp|A4ZGQ8|HMT1_BRAOT (Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN=HMT1 PE=1 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 7.7e-148
Identity = 244/324 (75.31%), Postives = 283/324 (87.35%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MG++K + LL+DLI+  GGCAV+DGG ATQLE HGA  ND LWSAV L+KDP+LIK+VH+
Sbjct: 1   MGLEKKSALLEDLIEKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKDPELIKRVHM 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGAD++V+SSYQATIPGFLS+GLS EE E LL++SVKLAVEARD FWD V    G+
Sbjct: 61  EYLEAGADVVVTSSYQATIPGFLSRGLSMEESESLLQKSVKLAVEARDRFWDKVSKTSGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           +YNRALVAASIGSYGAYLADGSEYSG YG DV +D LK FHRRR+Q+LV ASPDLLAFET
Sbjct: 121 SYNRALVAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEENVQIP+WICF+SVDGENAPSGESF+ECL+ +NKS+ + AVGIN
Sbjct: 181 IPNKLEAQACVELLEEENVQIPAWICFTSVDGENAPSGESFQECLETLNKSNNICAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           C PP F++ LI KF +LT K IVVYPNSGEVWDG+AKKWLPS CFGD +FE  +++WRDL
Sbjct: 241 CAPPQFMDNLIRKFSKLTQKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMFATKWRDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLK 325
           GAK IGGCCRTTPSTI+A+S+ LK
Sbjct: 301 GAKLIGGCCRTTPSTIKAISRDLK 324

[Close]

BLAST of Carg21590 vs. Swiss-Prot
Match: sp|Q9SDL7|HMT1_ARATH (Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 8.0e-145
Identity = 242/324 (74.69%), Postives = 280/324 (86.42%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           M ++K + LL+DLI+  GGCAV+DGG ATQLE HGA  ND LWSAV L+K+P+LIK+VH+
Sbjct: 1   MVLEKKSALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHM 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADI+V+SSYQATIPGFLS+GLS EE E LL++SV+LAVEARD FW+ V    G+
Sbjct: 61  EYLEAGADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           +YNRALVAASIGSYGAYLADGSEYSGHYG +V +D LK FHRRRLQ+LV A PDLLAFET
Sbjct: 121 SYNRALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEE VQIP+WICF+SVDGE APSGESFEECL+ +NKS+ + AVGIN
Sbjct: 181 IPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           C PP FIE LI KF +LT K IVVYPNSGEVWDG+AK+WLPS CFGDD+FE  +++WRDL
Sbjct: 241 CAPPQFIENLIRKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLK 325
           GAK IGGCCRTTPSTI A+S+ LK
Sbjct: 301 GAKLIGGCCRTTPSTINAISRDLK 324

[Close]

BLAST of Carg21590 vs. Swiss-Prot
Match: sp|Q9FUN0|HMT1_MAIZE (Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.3e-128
Identity = 215/316 (68.04%), Postives = 252/316 (79.75%), Query Frame = 0


Query: 9   LLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYLEAGAD 68
           +L+DL+  AGGCAVIDGG ATQLE  GA  ND LWSA CL+  P L+K+VH++YLEAGAD
Sbjct: 3   VLEDLVARAGGCAVIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGAD 62

Query: 69  ILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGYNYNRALVA 128
           +++SSSYQATIPGF+++G+S  E E LL  SVKLA EARD FW S        YNRALVA
Sbjct: 63  VIISSSYQATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYNRALVA 122

Query: 129 ASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFETIPNKLEAQ 188
           ASIGSYGAYLADGSEYSG YG D+  + LK FHRRRLQ+L  A PDL+AFE IPN++EAQ
Sbjct: 123 ASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAFEAIPNQMEAQ 182

Query: 189 ACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGINCTPPHFIE 248
           A VELLEEE VQIPSWICFSSVDG+N  SGESF +CLK +N S+KV  VG+NCTPP FIE
Sbjct: 183 ALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLKILNASEKVAVVGVNCTPPQFIE 242

Query: 249 ALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDLGAKFIGGC 308
            +IC+F++ T K I VYPNSGEVWDGRAK+WLP  C G   F++L+ RW++ GA  IGGC
Sbjct: 243 GIICEFRKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKRWQEAGASLIGGC 302

Query: 309 CRTTPSTIRAVSKVLK 325
           CRTTPSTIRAVSK+LK
Sbjct: 303 CRTTPSTIRAVSKILK 318

[Close]

BLAST of Carg21590 vs. Swiss-Prot
Match: sp|Q8LAX0|HMT3_ARATH (Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 SV=2)

HSP 1 Score: 378.3 bits (970), Expect = 9.0e-104
Identity = 181/331 (54.68%), Postives = 238/331 (71.90%), Query Frame = 0


Query: 4   KKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYL 63
           ++ ++L+ D ++  GG AV+DGG AT+L++HGA  ND LWSA CL+  P L+ KVHL+YL
Sbjct: 7   EETSSLMTDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYL 66

Query: 64  EAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWD-SVKSNPGYNY 123
           E+GA+I++++SYQATI GF++KGLS  E E LL RSV++  EAR+ F++   K +  + Y
Sbjct: 67  ESGANIIITASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAY 126

Query: 124 ------NRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLL 183
                    LVAAS+GSYGAYLADGSEYSG YG  V  +TLK FHRRR+QIL  +  DL+
Sbjct: 127 AGKASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLI 186

Query: 184 AFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNA 243
           AFETIPNKLEA+A  +LLEEE++ IP+W  F+S DG + P G+S  EC K  +    V A
Sbjct: 187 AFETIPNKLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNVVA 246

Query: 244 VGINCTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSR 303
           +GINCT P +I ALI   +++T KPIVVYPNSGEV+DG  KKW+ S    ++ F S  S+
Sbjct: 247 IGINCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYVSK 306

Query: 304 WRDLGAKFIGGCCRTTPSTIRAVSKVLKESP 328
           WRD GA   GGCCRTTP+TIRA++KVL + P
Sbjct: 307 WRDAGASLFGGCCRTTPNTIRAIAKVLSDEP 337

[Close]

BLAST of Carg21590 vs. Swiss-Prot
Match: sp|Q9M1W4|HMT2_ARATH (Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.2e-101
Identity = 178/319 (55.80%), Postives = 228/319 (71.47%), Query Frame = 0


Query: 10  LDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEYLEAGADI 69
           + D ++  GG AVIDGGLAT+ E+HGA  ND LWSA CLV  P LI  VHL+YLEAGADI
Sbjct: 9   MKDFLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADI 68

Query: 70  LVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGYN-----YNR 129
           + S+SYQATI GF +KG S EE E LL++SV++A EAR+S++D   ++   +        
Sbjct: 69  ISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRP 128

Query: 130 ALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFETIPNK 189
            LVAAS+GSYGAYLADGSEYSG YG  + ++ LK FHRRRLQ+L  +  DL+AFETIPNK
Sbjct: 129 ILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIPNK 188

Query: 190 LEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGINCTPP 249
           +EAQA  +LLEE +V+IP W  F+S DG N  SG+S +EC+      +KV AVGINCTPP
Sbjct: 189 IEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCTPP 248

Query: 250 HFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDLGAKF 309
            FIE L+ + +++T KPI+VYPNSGE +D   K+W+ +   GD+ F S   +W D G   
Sbjct: 249 RFIEGLVLEIEKVTSKPILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEKWMDAGVSL 308

Query: 310 IGGCCRTTPSTIRAVSKVL 324
           +GGCCRTTP+TIRA+ K L
Sbjct: 309 LGGCCRTTPTTIRAIHKRL 327

[Close]

BLAST of Carg21590 vs. TrEMBL
Match: tr|A0A1S3BEY1|A0A1S3BEY1_CUCME (homocysteine S-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103489284 PE=4 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 4.4e-172
Identity = 296/328 (90.24%), Postives = 310/328 (94.51%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MG++KATTLLDDL+ NAGGCAVIDGGLATQLEKHGAVFND LWSAVCL+ DPDLIKKVHL
Sbjct: 1   MGIEKATTLLDDLLHNAGGCAVIDGGLATQLEKHGAVFNDPLWSAVCLINDPDLIKKVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADILV+SSYQATIPGF+SKGLS EEGELLLE+SVKLA+EARDSFWDSVK  PG+
Sbjct: 61  EYLEAGADILVTSSYQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           NYNRALVAASIGSYGAYLADGSEYSGHYGPDV+VD LK FHRRRL+ILV ASPDLLAFET
Sbjct: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVNVDKLKDFHRRRLRILVDASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFE+CL AINKSDKVNAVGIN
Sbjct: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           CTPPHFIEALI KFKELT+K IVVYPNSGEVWDGR KKWLPSNCFGDDKFES +SRW  L
Sbjct: 241 CTPPHFIEALITKFKELTNKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFESFTSRWCKL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKESPH 329
           GA FIGGCCRTTPSTIRAVSKVLKES H
Sbjct: 301 GATFIGGCCRTTPSTIRAVSKVLKESSH 328

[Close]

BLAST of Carg21590 vs. TrEMBL
Match: tr|A0A0A0KR42|A0A0A0KR42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609660 PE=4 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 8.2e-171
Identity = 294/326 (90.18%), Postives = 306/326 (93.87%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MG+KKATTLLDD + NAGGCAVIDGG ATQLEKHGAV ND LWSAVCL+ DP LIKKVHL
Sbjct: 1   MGIKKATTLLDDFLHNAGGCAVIDGGFATQLEKHGAVINDPLWSAVCLINDPHLIKKVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADILVSSSYQATIPGF+SKGLS EEGELLLE+SVKLA+EARDSFWDSVK  PG+
Sbjct: 61  EYLEAGADILVSSSYQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDSVKCIPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
            YNRALVAASIGSYGAYLADGSEYSGHYGPDV+VD LK FHRRRLQI V ASPDLLAFET
Sbjct: 121 KYNRALVAASIGSYGAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEEN+QIPSWICFSSVDGENAPSGESFE+CL AINKSDKVNAVGIN
Sbjct: 181 IPNKLEAQACVELLEEENIQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           CTPPHFIEALI KFKELT+K IVVYPNSGEVWDGR KKWLPSNCFGDDKFESLSSRWR+L
Sbjct: 241 CTPPHFIEALITKFKELTNKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFESLSSRWRNL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKES 327
           GA FIGGCCRTTPSTIRAVSKVLKES
Sbjct: 301 GATFIGGCCRTTPSTIRAVSKVLKES 326

[Close]

BLAST of Carg21590 vs. TrEMBL
Match: tr|A0A2I4F0Z3|A0A2I4F0Z3_9ROSI (homocysteine S-methyltransferase 1 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994524 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 6.5e-160
Identity = 269/326 (82.52%), Postives = 295/326 (90.49%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MG KK T  L+DLI+ AGGCAV+DGG ATQLE+HGAV ND LWSA+CL+KDPDLIK+VHL
Sbjct: 1   MGKKKETASLEDLIEKAGGCAVVDGGFATQLERHGAVINDPLWSALCLIKDPDLIKRVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADILV+SSYQAT+PGFLS+GLS EEGELLLE+SVKLAVEARDSFWDSVK  PG+
Sbjct: 61  EYLEAGADILVTSSYQATLPGFLSRGLSIEEGELLLEKSVKLAVEARDSFWDSVKRTPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
            YN+ALVAASIGSYGAYLADGSEYSG YGPDVD+D LK FHRRRLQ+LV A PDLLAFET
Sbjct: 121 CYNKALVAASIGSYGAYLADGSEYSGSYGPDVDLDKLKDFHRRRLQVLVEAGPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNK+EAQACVELLEE+N+++PSWICFSSVDGENAPSGE F+ECL  INKS+KV AVGIN
Sbjct: 181 IPNKIEAQACVELLEEQNIEVPSWICFSSVDGENAPSGERFKECLDIINKSNKVQAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           C PPHFIEALICKFKELT K IVVYPNSGEVWDGRAK+WLPS CF DDKFE  +SRWRD 
Sbjct: 241 CAPPHFIEALICKFKELTKKAIVVYPNSGEVWDGRAKRWLPSKCFDDDKFELFASRWRDA 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKES 327
           GAK IGGCCRTTPST +A+SKVLKES
Sbjct: 301 GAKLIGGCCRTTPSTTQAISKVLKES 326

[Close]

BLAST of Carg21590 vs. TrEMBL
Match: tr|D7T951|D7T951_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03500 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.1e-159
Identity = 270/323 (83.59%), Postives = 295/323 (91.33%), Query Frame = 0


Query: 3   MKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHLEY 62
           M K ++LL+DLI+ AGGCAV+DGG ATQLE HGA  ND LWSA+CL+KDPDLIK+VHLEY
Sbjct: 1   MGKTSSLLEDLIEKAGGCAVVDGGFATQLEIHGATINDPLWSALCLIKDPDLIKRVHLEY 60

Query: 63  LEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGYNY 122
           LEAGADILV+SSYQATIPGFLSKGLS EEGELLLERSV+LAVEARD FWD  K  PG+ Y
Sbjct: 61  LEAGADILVTSSYQATIPGFLSKGLSIEEGELLLERSVRLAVEARDKFWDVTKRVPGHGY 120

Query: 123 NRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFETIP 182
           NRALVAASIGSYGAYLADGSEYSG YGPD+++D LK FHRRRLQ+LV + PDLLAFETIP
Sbjct: 121 NRALVAASIGSYGAYLADGSEYSGCYGPDMNLDKLKDFHRRRLQVLVRSCPDLLAFETIP 180

Query: 183 NKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGINCT 242
           NKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESF+ECL  INKS KVNAVGINC 
Sbjct: 181 NKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFKECLDIINKSKKVNAVGINCA 240

Query: 243 PPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDLGA 302
           PPHF+E+LICKFKELT+KPIVVYPNSGEVWDGRAK+WLPS CFGDDKFE  +++WRDLGA
Sbjct: 241 PPHFLESLICKFKELTEKPIVVYPNSGEVWDGRAKRWLPSKCFGDDKFELYATKWRDLGA 300

Query: 303 KFIGGCCRTTPSTIRAVSKVLKE 326
           K IGGCCRTTPSTIRA+SKVLKE
Sbjct: 301 KLIGGCCRTTPSTIRAISKVLKE 323

[Close]

BLAST of Carg21590 vs. TrEMBL
Match: tr|B9HWH8|B9HWH8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G125200v3 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.0e-157
Identity = 264/325 (81.23%), Postives = 298/325 (91.69%), Query Frame = 0


Query: 1   MGMKKATTLLDDLIQNAGGCAVIDGGLATQLEKHGAVFNDSLWSAVCLVKDPDLIKKVHL 60
           MG +KA T L+DLI+ AGGCAVIDGG ATQLE+HGA  ND LWSA+CL+KDPDLIK+VHL
Sbjct: 1   MGFQKAKTSLEDLIKKAGGCAVIDGGFATQLERHGATINDPLWSALCLIKDPDLIKRVHL 60

Query: 61  EYLEAGADILVSSSYQATIPGFLSKGLSAEEGELLLERSVKLAVEARDSFWDSVKSNPGY 120
           EYLEAGADILV+SSYQAT+PGFLS+GLSAEEGELLL++SV LAVEAR+ FWD+V+ NPG+
Sbjct: 61  EYLEAGADILVTSSYQATLPGFLSRGLSAEEGELLLKKSVTLAVEARNKFWDAVERNPGH 120

Query: 121 NYNRALVAASIGSYGAYLADGSEYSGHYGPDVDVDTLKYFHRRRLQILVGASPDLLAFET 180
           +YNRALVAASIGSYGAYLADGSEYSG YGPDV+++ LK FHRRRLQ+LV ASPDLLAFET
Sbjct: 121 SYNRALVAASIGSYGAYLADGSEYSGCYGPDVNLEKLKDFHRRRLQVLVKASPDLLAFET 180

Query: 181 IPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFEECLKAINKSDKVNAVGIN 240
           IPNKLEAQACVELLEEEN+ IPSWICFS VDGENAPSGESF++CL+AINKSD+V AVGIN
Sbjct: 181 IPNKLEAQACVELLEEENINIPSWICFSCVDGENAPSGESFQQCLEAINKSDRVKAVGIN 240

Query: 241 CTPPHFIEALICKFKELTDKPIVVYPNSGEVWDGRAKKWLPSNCFGDDKFESLSSRWRDL 300
           C PPHFIE+LICKFKELT+K IVVYPNSGEVWDGRAK+WLPS CF DDKFE  ++RW DL
Sbjct: 241 CAPPHFIESLICKFKELTEKLIVVYPNSGEVWDGRAKRWLPSTCFDDDKFEVFATRWHDL 300

Query: 301 GAKFIGGCCRTTPSTIRAVSKVLKE 326
           GA  IGGCCRTTPSTI+A+SKVLK+
Sbjct: 301 GASLIGGCCRTTPSTIQAISKVLKD 325

The following BLAST results are available for this feature:

BLAST of Carg21590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945567.1	7.0e-190	99.09	homocysteine S-methyltransferase 1 [Cucurbita moschata]	[more]
XP_023541078.1	4.6e-189	99.09	homocysteine S-methyltransferase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968494.1	7.3e-187	98.17	homocysteine S-methyltransferase 1-like [Cucurbita maxima]	[more]
XP_022150665.1	3.7e-175	92.33	homocysteine S-methyltransferase 1 [Momordica charantia]	[more]
XP_008446599.1	6.6e-172	90.24	PREDICTED: homocysteine S-methyltransferase 1 [Cucumis melo]	[more]

BLAST of Carg21590 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25900.1	4.4e-146	74.69	Homocysteine S-methyltransferase family protein	[more]
AT3G22740.1	5.0e-105	54.68	homocysteine S-methyltransferase 3	[more]
AT3G63250.1	1.8e-102	55.80	homocysteine methyltransferase 2	[more]

BLAST of Carg21590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A4ZGQ8\|HMT1_BRAOT	7.7e-148	75.31	Homocysteine S-methyltransferase 1 OS=Brassica oleracea var. italica OX=36774 GN...	[more]
sp\|Q9SDL7\|HMT1_ARATH	8.0e-145	74.69	Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HMT-1 PE=1...	[more]
sp\|Q9FUN0\|HMT1_MAIZE	2.3e-128	68.04	Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1	[more]
sp\|Q8LAX0\|HMT3_ARATH	9.0e-104	54.68	Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 ...	[more]
sp\|Q9M1W4\|HMT2_ARATH	3.2e-101	55.80	Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1...	[more]

BLAST of Carg21590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BEY1\|A0A1S3BEY1_CUCME	4.4e-172	90.24	homocysteine S-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103489284 PE=4 ...	[more]
tr\|A0A0A0KR42\|A0A0A0KR42_CUCSA	8.2e-171	90.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609660 PE=4 SV=1	[more]
tr\|A0A2I4F0Z3\|A0A2I4F0Z3_9ROSI	6.5e-160	82.52	homocysteine S-methyltransferase 1 isoform X1 OS=Juglans regia OX=51240 GN=LOC10...	[more]
tr\|D7T951\|D7T951_VITVI	1.1e-159	83.59	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g03500 PE=4 SV=...	[more]
tr\|B9HWH8\|B9HWH8_POPTR	1.0e-157	81.23	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G125200v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0047150	betaine-homocysteine S-methyltransferase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009086	methionine biosynthetic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR036589	HCY_dom_sf
IPR017226	Betaine-hCys_S-MeTrfase_BHMT
IPR003726	HCY_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0047150	betaine-homocysteine S-methyltransferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21590-RA	Carg21590-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003726	Homocysteine-binding domain	PFAM	PF02574	S-methyl_trans	coord: 22..322 e-value: 1.4E-72 score: 244.6
IPR003726	Homocysteine-binding domain	PROSITE	PS50970	HCY	coord: 9..323 score: 48.174
IPR017226	Betaine-homocysteine S-methyltransferase, BHMT	PIRSF	PIRSF037505	BHMT	coord: 1..259 e-value: 2.1E-8 score: 31.7 coord: 287..327 e-value: 0.097 score: 9.8
IPR036589	Homocysteine-binding domain superfamily	GENE3D	G3DSA:3.20.20.330		coord: 9..322 e-value: 1.5E-99 score: 335.1
IPR036589	Homocysteine-binding domain superfamily	SUPERFAMILY	SSF82282	Homocysteine S-methyltransferase	coord: 17..325
None	No IPR available	PANTHER	PTHR21091	METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED	coord: 8..325
None	No IPR available	PANTHER	PTHR21091:SF140	HOMOCYSTEINE S-METHYLTRANSFERASE 1	coord: 8..325

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21590	Cla020396	Watermelon (97103) v1	carwmB1044
Carg21590	Csa5G609660	Cucumber (Chinese Long) v2	carcuB1057
Carg21590	MELO3C012247	Melon (DHL92) v3.5.1	carmeB1010
Carg21590	CSPI05G25260	Wild cucumber (PI 183967)	carcpiB1079
Carg21590	Cucsa.283580	Cucumber (Gy14) v1	carcgyB1159
Carg21590	CmaCh04G015090	Cucurbita maxima (Rimu)	carcmaB1443
Carg21590	CmaCh18G010210	Cucurbita maxima (Rimu)	carcmaB1441
Carg21590	CmoCh04G015790	Cucurbita moschata (Rifu)	carcmoB1397
Carg21590	CmoCh18G010310	Cucurbita moschata (Rifu)	carcmoB1395
Carg21590	Lsi04G002540	Bottle gourd (USVL1VR-Ls)	carlsiB953
Carg21590	Cp4.1LG09g02920	Cucurbita pepo (Zucchini)	carcpeB1448
Carg21590	Cp4.1LG01g13650	Cucurbita pepo (Zucchini)	carcpeB1452
Carg21590	MELO3C012247.2	Melon (DHL92) v3.6.1	carmedB1022
Carg21590	CsaV3_5G034310	Cucumber (Chinese Long) v3	carcucB1090
Carg21590	Cla97C05G104590	Watermelon (97103) v2	carwmbB1102
Carg21590	Bhi07G001105	Wax gourd	carwgoB1222

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21590	Carg01840	Silver-seed gourd	carcarB627

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21590	Silver-seed gourd	carcarB462
Carg21590	Cucumber (Gy14) v2	carcgybB1025
Carg21590	Cucumber (Gy14) v2	carcgybB1026
Carg21590	Cucumber (Gy14) v1	carcgyB1158
Carg21590	Cucurbita maxima (Rimu)	carcmaB1444
Carg21590	Cucurbita moschata (Rifu)	carcmoB1398
Carg21590	Wild cucumber (PI 183967)	carcpiB1078
Carg21590	Cucumber (Chinese Long) v2	carcuB1056
Carg21590	Cucumber (Chinese Long) v3	carcucB1089
Carg21590	Melon (DHL92) v3.5.1	carmeB1011
Carg21590	Melon (DHL92) v3.6.1	carmedB1023
Carg21590	Watermelon (Charleston Gray)	carwcgB1016
Carg21590	Watermelon (Charleston Gray)	carwcgB1017
Carg21590	Watermelon (97103) v1	carwmB1045
Carg21590	Watermelon (97103) v2	carwmbB1103
Carg21590	Wax gourd	carwgoB1221