Cp4.1LG01g13120 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g13120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	18S pre-ribosomal assembly protein gar2
Location	Cp4.1LG01 : 8421767 .. 8423909 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAGAGGGCGAGCCTGTAGTTTCCCATTCAGATGCTAGCCCCAAGTTTATTCCCAAGTCTTTTGAGTGCGATAACGATGCTCTTGATTCTGGTGGGATGAAGCTGGAAGATCATAAAGATTTTACAGGTCTTCTCAAAGGTAACGAGGATGCCAATCACAAGAATACTGTTGTAGGTCTTGATGATCTTAATGAATTTGACGAAGTTAAAGCCTTTGTGCCATCACTCACTAATTCTTCTAAAGTAGACTTGTTTGAGGAAGACTCGGAGTTATACATGGAAAAGAGTATTGTTGAATGTCAACTTCCTGAACTCATAGTTCGTTACAAAGAAAACAGCTGCAATATTGTGAAGGATATTTGTATTGACGACGGAGTACCTTCTCGGGATAAGCTCTTGTGTGGTAGTAGTAGTTTGGATGAGAAGGCTGTCTGTGTCATTCTCCCTCCTGAGGAAGATTGGAAGGACGAGTTGGCAAGAACGCTGGAGGAAGGAGATATGTTTGCTTCTGACGATTCAGAGCATTCGGAATCTTTTGGCAAAAAGGATTCACCCAATCAAAGCGATTTCGAGGATTTGGCTAGAACACCCGAGGCAGAATATGATGTGGATTATTTTACTGACAATGATATACTAAATCTTCCAATGACAGACTTGTTTACAGAGAGCGTAAAGCCAATGACCAACAATAAGAATGAGCCTAACCCTCAGTCTGAACAGGTATGTTTTTTCATTTGGCATAATGGATGTTCAACCTACGTCAAAAACATGTATCACTGTCTTTAGTTGAGACTTTCATTACTGTTCTTGTTTCTAGCTCGCATTATCATTCGTCGAGTGTTATGCACAATTAATTGTATGGATCTCTTGGAGCTCTGGACGTTGTTATCAGTATGTTAGTTTAAAACTCTCTAGTTGTAGCCAAAGAATGTTGGGGTGGGGGTTGGCTATGACTGAAACTTTTAATTTGAGTTCTTGTTGGCTCTTTCAACTATAGTCATGATGTAATTATGCTTGTGGGAATTGTGTTAGAAGGTGACTGTATTTTGTTTGTTCTCATGCAGGTTTTGGAAGTCCCTGTTTTGGCACGTGTAGCTGAAGAATCTTATAGTGACACCAGAGAAGCAATATCAGAAGTTGCTTCTTCAGATCTAGCAACTGAAGAGTCAAAAAATAACGATTCTGCGGAGGATATATCATACAATAGTAAAATGGACAAAGGAAACATTACTTTTGATTTCAATTCTTTTGCATCCACAGCTAGTGATGGACTGGAGCATTGTGATAATGGTGACTTGAACTCTTCAGCTCCTTCGACCAGTGCCTCGGTGGATTGCCTAGAGACTAGCAGCTCCAACCGCTTAGCTTCAACTGACAAATGTCAAGCACATTGTTACGATTATTGTAGTAACCCGAAACGTATGGAGTATGAAGACTTGCTACGAGTGGAATATGAAGACTCACATAAGGCAGAAGTTGGGAATTCTGATAGTCATTTAGTTTCAAGCCAAGTTCAACATGGCGTAGGTGAAGCAAGTGTCTCTTCTATGGTATCTTTGGGGAGTCTGTTGTCCAATTCAGGCCATATAGGTTACTCCGGCAGCATCTCTCGTCGTTCCGATAGCAGCACGACCAGCACCCGTTCCTTTGCCTTTCCCATGTAAAACTCTTGATATCTCTTAATGTGTACATATTTCTTCTAATCATTATAGTCCGGAATTAATGGGAGCAAAATGTTTATCTTCCTGCAGATTACAATCCGAATGGAACAGTAGTCCTGTTAGAATGGCTAAAGCTGATCAGAAACATCTACGGAAGCTTCGGGGTTGGAGACAAGGCCTTCTATGCTGTAGATTCTGAAAGCTTCTACTAATTTATACCCATAGGTTTAGTGTCTAAAATATGCATTTTACCCAAGTTTTTTCCTGCCGAGTCACATAAATATAGTCAATCTTTACCGCTTTACCTTCATTTGTCTGGCTCTCTTTCATATGCAATATCAACAAGTTCTTAGAATTTCAGTTTTCAAAAAAAGGGCCATTTCTGCTTATCTTACAGAGAATGTTTACATAATGTAAGGCCATTTTACAAGATTAGCTGAAATACATGTTTGTTGGTTCGAACACTGAGTGATTATAAAAA

mRNA sequence

TACAGAGGGCGAGCCTGTAGTTTCCCATTCAGATGCTAGCCCCAAGTTTATTCCCAAGTCTTTTGAGTGCGATAACGATGCTCTTGATTCTGGTGGGATGAAGCTGGAAGATCATAAAGATTTTACAGGTCTTCTCAAAGGTAACGAGGATGCCAATCACAAGAATACTGTTGTAGGTCTTGATGATCTTAATGAATTTGACGAAGTTAAAGCCTTTGTGCCATCACTCACTAATTCTTCTAAAGTAGACTTGTTTGAGGAAGACTCGGAGTTATACATGGAAAAGAGTATTGTTGAATGTCAACTTCCTGAACTCATAGTTCGTTACAAAGAAAACAGCTGCAATATTGTGAAGGATATTTGTATTGACGACGGAGTACCTTCTCGGGATAAGCTCTTGTGTGGTAGTAGTAGTTTGGATGAGAAGGCTGTCTGTGTCATTCTCCCTCCTGAGGAAGATTGGAAGGACGAGTTGGCAAGAACGCTGGAGGAAGGAGATATGTTTGCTTCTGACGATTCAGAGCATTCGGAATCTTTTGGCAAAAAGGATTCACCCAATCAAAGCGATTTCGAGGATTTGGCTAGAACACCCGAGGCAGAATATGATGTGGATTATTTTACTGACAATGATATACTAAATCTTCCAATGACAGACTTGTTTACAGAGAGCGTAAAGCCAATGACCAACAATAAGAATGAGCCTAACCCTCAGTCTGAACAGGTTTTGGAAGTCCCTGTTTTGGCACGTGTAGCTGAAGAATCTTATAGTGACACCAGAGAAGCAATATCAGAAGTTGCTTCTTCAGATCTAGCAACTGAAGAGTCAAAAAATAACGATTCTGCGGAGGATATATCATACAATAGTAAAATGGACAAAGGAAACATTACTTTTGATTTCAATTCTTTTGCATCCACAGCTAGTGATGGACTGGAGCATTGTGATAATGGTGACTTGAACTCTTCAGCTCCTTCGACCAGTGCCTCGGTGGATTGCCTAGAGACTAGCAGCTCCAACCGCTTAGCTTCAACTGACAAATGTCAAGCACATTGTTACGATTATTGTAGTAACCCGAAACGTATGGAGTATGAAGACTTGCTACGAGTGGAATATGAAGACTCACATAAGGCAGAAGTTGGGAATTCTGATAGTCATTTAGTTTCAAGCCAAGTTCAACATGGCGTAGGTGAAGCAAGTGTCTCTTCTATGGTATCTTTGGGGAGTCTGTTGTCCAATTCAGGCCATATAGGTTACTCCGGCAGCATCTCTCGTCGTTCCGATAGCAGCACGACCAGCACCCGTTCCTTTGCCTTTCCCATATTACAATCCGAATGGAACAGTAGTCCTGTTAGAATGGCTAAAGCTGATCAGAAACATCTACGGAAGCTTCGGGGTTGGAGACAAGGCCTTCTATGCTGTAGATTCTGAAAGCTTCTACTAATTTATACCCATAGGTTTAGTGTCTAAAATATGCATTTTACCCAAGTTTTTTCCTGCCGAGTCACATAAATATAGTCAATCTTTACCGCTTTACCTTCATTTGTCTGGCTCTCTTTCATATGCAATATCAACAAGTTCTTAGAATTTCAGTTTTCAAAAAAAGGGCCATTTCTGCTTATCTTACAGAGAATGTTTACATAATGTAAGGCCATTTTACAAGATTAGCTGAAATACATGTTTGTTGGTTCGAACACTGAGTGATTATAAAAA

Coding sequence (CDS)

ATGAAGCTGGAAGATCATAAAGATTTTACAGGTCTTCTCAAAGGTAACGAGGATGCCAATCACAAGAATACTGTTGTAGGTCTTGATGATCTTAATGAATTTGACGAAGTTAAAGCCTTTGTGCCATCACTCACTAATTCTTCTAAAGTAGACTTGTTTGAGGAAGACTCGGAGTTATACATGGAAAAGAGTATTGTTGAATGTCAACTTCCTGAACTCATAGTTCGTTACAAAGAAAACAGCTGCAATATTGTGAAGGATATTTGTATTGACGACGGAGTACCTTCTCGGGATAAGCTCTTGTGTGGTAGTAGTAGTTTGGATGAGAAGGCTGTCTGTGTCATTCTCCCTCCTGAGGAAGATTGGAAGGACGAGTTGGCAAGAACGCTGGAGGAAGGAGATATGTTTGCTTCTGACGATTCAGAGCATTCGGAATCTTTTGGCAAAAAGGATTCACCCAATCAAAGCGATTTCGAGGATTTGGCTAGAACACCCGAGGCAGAATATGATGTGGATTATTTTACTGACAATGATATACTAAATCTTCCAATGACAGACTTGTTTACAGAGAGCGTAAAGCCAATGACCAACAATAAGAATGAGCCTAACCCTCAGTCTGAACAGGTTTTGGAAGTCCCTGTTTTGGCACGTGTAGCTGAAGAATCTTATAGTGACACCAGAGAAGCAATATCAGAAGTTGCTTCTTCAGATCTAGCAACTGAAGAGTCAAAAAATAACGATTCTGCGGAGGATATATCATACAATAGTAAAATGGACAAAGGAAACATTACTTTTGATTTCAATTCTTTTGCATCCACAGCTAGTGATGGACTGGAGCATTGTGATAATGGTGACTTGAACTCTTCAGCTCCTTCGACCAGTGCCTCGGTGGATTGCCTAGAGACTAGCAGCTCCAACCGCTTAGCTTCAACTGACAAATGTCAAGCACATTGTTACGATTATTGTAGTAACCCGAAACGTATGGAGTATGAAGACTTGCTACGAGTGGAATATGAAGACTCACATAAGGCAGAAGTTGGGAATTCTGATAGTCATTTAGTTTCAAGCCAAGTTCAACATGGCGTAGGTGAAGCAAGTGTCTCTTCTATGGTATCTTTGGGGAGTCTGTTGTCCAATTCAGGCCATATAGGTTACTCCGGCAGCATCTCTCGTCGTTCCGATAGCAGCACGACCAGCACCCGTTCCTTTGCCTTTCCCATATTACAATCCGAATGGAACAGTAGTCCTGTTAGAATGGCTAAAGCTGATCAGAAACATCTACGGAAGCTTCGGGGTTGGAGACAAGGCCTTCTATGCTGTAGATTCTGA

Protein sequence

MKLEDHKDFTGLLKGNEDANHKNTVVGLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPNQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVLEVPVLARVAEESYSDTREAISEVASSDLATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHKAEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF

Homology

[Close]

BLAST of Cp4.1LG01g13120 vs. TrEMBL
Match: A0A0A0KQY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606850 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 4.7e-131
Identity = 279/453 (61.59%), Postives = 317/453 (69.98%), Query Frame = 1


Query: 1   MKLEDHKDFTGLLKGNEDANHKNT-----------VVGLDDLNEFDEVKAFVPSLTNSSK 60
           MKLED K+FT  LKGN DA+H NT            + LDD N++D+VKAFV  L NS K
Sbjct: 35  MKLEDQKEFTNNLKGNVDADHNNTDADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCK 94

Query: 61  VDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDE 120
            DL EEDSELYMEKS+VECQLPELIV YKEN CNIVKDICIDDG P RDKL CGSS LDE
Sbjct: 95  ADLSEEDSELYMEKSVVECQLPELIVCYKENICNIVKDICIDDGTP-RDKLFCGSS-LDE 154

Query: 121 KAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPNQSDFEDLARTPEAEY 180
           K VC ILPP +DWKDE    L++ DMFASDDSEHSESFG KDSPN+ D +DLA TPEAEY
Sbjct: 155 KDVCSILPPTKDWKDESVGELKQRDMFASDDSEHSESFGSKDSPNEYDSKDLAITPEAEY 214

Query: 181 DVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVLEVPVLARVAEESYSDTREA 240
           DV YFTDND   +PMTDL TES+KP+TNN+ +P+PQSEQV                    
Sbjct: 215 DVAYFTDND---MPMTDLVTESLKPLTNNEIKPHPQSEQVF---------------IETT 274

Query: 241 ISEVASSDLATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGDLNSS 300
            SEV       EES +N                 T +  S + T+++  +H D+    ++
Sbjct: 275 CSEVPVLVRVAEESFSN-----------------TREATSESITSAEDPKHGDS----AN 334

Query: 301 APSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHKAEVGNS 360
           APSTSASV C ET+SSN LAS DKC+A C+   SNPK +EYEDL RVEYED  K EVGN 
Sbjct: 335 APSTSASVGCKETTSSNPLASADKCEAECHTTSSNPKHVEYEDLRRVEYEDIPKTEVGNF 394

Query: 361 DSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSFAFPILQ 420
           DSH VSS+V  GVGE S S +  LGSL+SNSG IGYSGSIS RSDSSTTSTRSFAFPILQ
Sbjct: 395 DSHTVSSEVSQGVGETSFS-VAPLGSLISNSGRIGYSGSISHRSDSSTTSTRSFAFPILQ 445

Query: 421 SEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           SEW SSPVRM K D+KHL+K RGWR G+LCCRF
Sbjct: 455 SEWTSSPVRMVKPDRKHLQKHRGWRHGILCCRF 445

[Close]

BLAST of Cp4.1LG01g13120 vs. TrEMBL
Match: B9RLG9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466920 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.8e-43
Identity = 152/417 (36.45%), Postives = 226/417 (54.20%), Query Frame = 1


Query: 35  DEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGV 94
           +EV+ F      S K++ F++DS  Y++K+++E +LPEL++ YKEN+ ++VKDIC+D+GV
Sbjct: 93  EEVRNFT-----SLKIESFDKDSVFYIDKNVMEPELPELVLCYKENTYHVVKDICVDEGV 152

Query: 95  PSRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESF--GKKDS 154
           PS++  L   +S+D++ +C  L PE+D K E+ +   + DM     S++  SF    K+S
Sbjct: 153 PSQENFLF-DTSVDQEKLCPYLIPEKDIKSEIQKERVDLDMSTQYLSKNDNSFKCDSKES 212

Query: 155 PNQSDFEDLARTPEAEY-DVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVLE 214
              ++ ED A    A Y   + F+  ++L +P         K + N+ +E    S Q   
Sbjct: 213 MAIAEIEDDAMEEIANYTSKETFSLGELLLMPEVVAELSHSKSLLNSTDEAEQLSIQRPS 272

Query: 215 VPVL---ARVAEESYSDTREAISEVASSDLATEESKNNDSA-EDISYNSKMDKGNITFDF 274
             ++   A   EES   T + +    + D   EES + ++    ++ +S     +   D 
Sbjct: 273 ENIVLATASACEESKYATEQFLLVTPAVDPLVEESGHEEAKLGTLTSDSSPKASDHGHDE 332

Query: 275 NSFASTA-SDGLEHCDNGDLNSSAPS-TSASVDCLETSSSNRLASTDKCQAHCYDYCSNP 334
              AS A S   E  +NG   + +PS T  SV  L +S+       +  Q    ++  + 
Sbjct: 333 VILASLAPSYATEEPENGAKAAKSPSHTLDSVSDLNSSAPTASGGEEGSQVGGSEHLESR 392

Query: 335 KRMEYEDLLRVEYEDSHKAEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGY 394
               +ED                S +   S Q+Q+  GE+S S+   L  L+S SG I Y
Sbjct: 393 NSSRHED---------------TSITEPFSGQLQYSHGESSFSAAGPLSGLISYSGPIAY 452

Query: 395 SGSISRRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           SGS+S RSDSSTTSTRSFAFPILQSEWNSSPVRMAKAD++H RK R WRQGLLCCRF
Sbjct: 453 SGSLSLRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADRRHFRKHRSWRQGLLCCRF 488

[Close]

BLAST of Cp4.1LG01g13120 vs. TrEMBL
Match: A0A0D2PTD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 150/421 (35.63%), Postives = 227/421 (53.92%), Query Frame = 1


Query: 36  EVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVP 95
           E + FVP  ++S K     +DS  Y++KS++E  LPEL+V YKE++ ++VKDICID+GVP
Sbjct: 101 EARDFVPPNSHSLKNMGSFQDSVFYLDKSVMEYALPELVVCYKESAYHVVKDICIDEGVP 160

Query: 96  SRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEH-SESFGKKDSPN 155
           ++DK L   S +D+K+ C  LP EED   +L +   E D+     S +  E+   KD  N
Sbjct: 161 TQDKFLF-DSVVDKKSDCNFLPSEEDQDSKLLKEKSESDISMQAGSMYPEENQMDKDIDN 220

Query: 156 QSDFEDLARTPEAEYDVDY-FTDNDILNLPMTDLFTESV---KPMTNN--KNEPNPQSEQ 215
           + D      + +   D+     +N+  N   +   TE +   + MT++  K   +  S++
Sbjct: 221 ERDSNKKTISDKCTQDISLSLEENEPKNRIPSQCDTEDLILSRKMTDDTMKMARDDVSKE 280

Query: 216 VLEVPVLARVAEESYSDTREAISEVASSDLATEESKNNDSAEDIS-----YNSKMDKGNI 275
           +  +  L  + E S +   +A+S    SD   ++   N   +++       ++  +  N 
Sbjct: 281 LFTLGELLSMPELS-TVKPKAMSSNCKSDGIKQQCFQNSKEKEVMVMPPLVSADKESDNS 340

Query: 276 TFDFNSFASTASDGLEHCDN--GDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDY 335
           + +    AS      E  D+   +    +P TS+S+   E S  ++LA+           
Sbjct: 341 SKETILSASAPVSVAEEMDSRKEEATMFSPVTSSSL-VNEVSDDSKLAARSIAFGFDSSA 400

Query: 336 CSNPKRMEYEDLLRVEYEDSHKAEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSG 395
            ++ K     +L R   E  H  ++ +      S+ +Q G GE+S S+   +  L+S SG
Sbjct: 401 LTSSKNEGCHNLDREALETGHTPKLEDIADQPSSNNLQCGNGESSFSAAGLVTGLISYSG 460

Query: 396 HIGYSGSISRRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCR 443
            I YSGS+S RSDSSTTSTRSFAFPILQSEWNSSPVRMAKAD++H RK RGWRQGLLCCR
Sbjct: 461 PIAYSGSLSHRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADRRHYRKHRGWRQGLLCCR 518

[Close]

BLAST of Cp4.1LG01g13120 vs. TrEMBL
Match: A0A0D2ND06_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-40
Identity = 150/421 (35.63%), Postives = 227/421 (53.92%), Query Frame = 1


Query: 36  EVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVP 95
           E + FVP  ++S K     +DS  Y++KS++E  LPEL+V YKE++ ++VKDICID+GVP
Sbjct: 49  EARDFVPPNSHSLKNMGSFQDSVFYLDKSVMEYALPELVVCYKESAYHVVKDICIDEGVP 108

Query: 96  SRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEH-SESFGKKDSPN 155
           ++DK L   S +D+K+ C  LP EED   +L +   E D+     S +  E+   KD  N
Sbjct: 109 TQDKFLF-DSVVDKKSDCNFLPSEEDQDSKLLKEKSESDISMQAGSMYPEENQMDKDIDN 168

Query: 156 QSDFEDLARTPEAEYDVDY-FTDNDILNLPMTDLFTESV---KPMTNN--KNEPNPQSEQ 215
           + D      + +   D+     +N+  N   +   TE +   + MT++  K   +  S++
Sbjct: 169 ERDSNKKTISDKCTQDISLSLEENEPKNRIPSQCDTEDLILSRKMTDDTMKMARDDVSKE 228

Query: 216 VLEVPVLARVAEESYSDTREAISEVASSDLATEESKNNDSAEDIS-----YNSKMDKGNI 275
           +  +  L  + E S +   +A+S    SD   ++   N   +++       ++  +  N 
Sbjct: 229 LFTLGELLSMPELS-TVKPKAMSSNCKSDGIKQQCFQNSKEKEVMVMPPLVSADKESDNS 288

Query: 276 TFDFNSFASTASDGLEHCDN--GDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDY 335
           + +    AS      E  D+   +    +P TS+S+   E S  ++LA+           
Sbjct: 289 SKETILSASAPVSVAEEMDSRKEEATMFSPVTSSSL-VNEVSDDSKLAARSIAFGFDSSA 348

Query: 336 CSNPKRMEYEDLLRVEYEDSHKAEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSG 395
            ++ K     +L R   E  H  ++ +      S+ +Q G GE+S S+   +  L+S SG
Sbjct: 349 LTSSKNEGCHNLDREALETGHTPKLEDIADQPSSNNLQCGNGESSFSAAGLVTGLISYSG 408

Query: 396 HIGYSGSISRRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCR 443
            I YSGS+S RSDSSTTSTRSFAFPILQSEWNSSPVRMAKAD++H RK RGWRQGLLCCR
Sbjct: 409 PIAYSGSLSHRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADRRHYRKHRGWRQGLLCCR 466

[Close]

BLAST of Cp4.1LG01g13120 vs. TrEMBL
Match: A0A0D2W4I9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G097400 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.9e-40
Identity = 155/441 (35.15%), Postives = 231/441 (52.38%), Query Frame = 1


Query: 23  NTVVGLDDLNEFDEVKAFVPSLTNSSK-VDLFEEDSELYMEKSIVECQLPELIVRYKENS 82
           N+V    + NE  EV+ FV   ++SSK +D F+ DS  Y++KS+++C+LPEL+V YKE++
Sbjct: 90  NSVHDFSNGNE-KEVRDFVTFNSHSSKNMDSFQ-DSVFYLDKSVMDCELPELVVCYKEST 149

Query: 83  CNIVKDICIDDGVPSRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDS 142
            ++VKDICID+GVP++D  L   SS+DEK+ C    P++D  +EL + + E DM   D  
Sbjct: 150 YHVVKDICIDEGVPTQDMFLF-ESSVDEKSECNFSYPKKDQDNELMKEMSETDMPMQD-- 209

Query: 143 EHSESFGKKDSPNQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPMTNNKNE 202
               SF  +++ +  D ++   +   + D D +  +  L+L       E  K      NE
Sbjct: 210 ---ISFSPEENQSGKDIDNECGS-NKKLDADTYMQDIALSL-------EENKSNKGIPNE 269

Query: 203 PNPQSEQVL-----------------EVPVLARVAE--ESYSDTREAISEVASSDLATEE 262
            +P+   V                  E+  L  +    E  +   EA+S    SD   ++
Sbjct: 270 WDPRDLLVTRDMKDDAMEMMSNDGSKELFTLGDILSLPELATLKSEAMSPDCKSDRIEQQ 329

Query: 263 SKNNDSAEDISYNSKMDK-GNITFDFNSFASTASDGLEHCDNGDLNSSAPSTSASVDCLE 322
           S  N S +++   S +++  N+     +  STA    E  D G   ++  S + +   LE
Sbjct: 330 SFENSSKKEVIVASAVEESNNLILSAPALVSTA----EGSDIGKGEATPISPAPASASLE 389

Query: 323 TSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHKAEVGNSDSHLVSSQVQHG 382
            +SS  +  T               +   + L     E    +++  +     SS +Q G
Sbjct: 390 ATSSGLVNETGSITFDSRSSAPTSGKGSNKPL-----EAGRTSKLEETADQPFSSNLQSG 449

Query: 383 VGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSFAFPILQSEWNSSPVRMAK 442
            GE+S S+   L  L+S SG I YSG++S RSDSSTTSTRSFAFPILQSEWNSSPVRMAK
Sbjct: 450 NGESSFSAAGPLTGLISYSGPIAYSGNLSLRSDSSTTSTRSFAFPILQSEWNSSPVRMAK 505

[Close]

BLAST of Cp4.1LG01g13120 vs. TAIR10
Match: AT2G03810.1 (AT2G03810.1 18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-31
Identity = 129/406 (31.77%), Postives = 198/406 (48.77%), Query Frame = 1


Query: 54  EEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCG------SSSL 113
           ++D   YM+K++  C LPE++V YKEN+ +IVKDIC+D+GVP ++K L G      SSS 
Sbjct: 84  KKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLFGEKDSVKSSST 143

Query: 114 DE--KAVCVILPPEEDWKDELARTLEEGDMFASD---DSEHSESFGKKDSPNQSDFEDLA 173
           ++  KA    + P E    E + +  +   F +D   D +  ES G+       DF D  
Sbjct: 144 EDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDHKTDRDVEESSGE-------DFADAE 203

Query: 174 RTPEAEYDVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVLEVPVLARVAEES 233
            T             ++   P   L    ++P  N+K+E                VA   
Sbjct: 204 GTSSNYNQEHLIVTEEVKASPTHGLSPSEIEPDENSKDE----------------VAISQ 263

Query: 234 YSDTREAIS--EVASSD----LATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASD 293
            +D++E ++  ++ S +       +++ ++DS E+ S +   DK   + +  +   T  +
Sbjct: 264 DNDSKECLTLGDILSREDEQKSLNQDNISSDSHEEQSPSQLQDKEKRSLETTAI-ETELE 323

Query: 294 GLEHCDNGDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRV 353
             E    G+   S+ ST+ S +  +T                   C+ P++ E E+    
Sbjct: 324 KTEEPKQGEEKLSSVSTTTSQEPNKT-------------------CNEPEKPETEN---- 383

Query: 354 EYEDSHKAEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSS 413
            ++ +   E    D    SS+   G    S +  VS+   ++ SG I YSGS+S RSD+S
Sbjct: 384 HHQQNCLVENSYEDDKFSSSRF--GETSFSAADSVSISGHITYSGPIAYSGSLSVRSDAS 438

Query: 414 TTSTRSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           TTS RSFAFPILQSEWNSSPVRMAKAD++  R+  GWR  LLCCRF
Sbjct: 444 TTSGRSFAFPILQSEWNSSPVRMAKADKR--RQKGGWRHTLLCCRF 438

[Close]

BLAST of Cp4.1LG01g13120 vs. TAIR10
Match: AT1G13650.2 (AT1G13650.2 BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4))

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-08
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 1


Query: 339 EDSHKAEVGNS--DSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSS 398
           E + ++E  NS  D++L+   + +G GE S     S    ++  G +  S ++S RSD  
Sbjct: 100 EITEESEADNSCDDNNLLKRNLPNGFGEISFCEAKSSLDYITYCGPLSGSENLSIRSDG- 159

Query: 399 TTSTRSFAFPILQSEWNSSPVRMAKADQKHLR 429
            TS  SFA PILQSEWNSSPVRM KA++  LR
Sbjct: 160 -TSASSFALPILQSEWNSSPVRMGKAEETQLR 189

[Close]

BLAST of Cp4.1LG01g13120 vs. NCBI nr
Match: gi|659091292|ref|XP_008446473.1| (PREDICTED: dentin sialophosphoprotein isoform X2 [Cucumis melo])

HSP 1 Score: 583.6 bits (1503), Expect = 3.0e-163
Identity = 324/459 (70.59%), Postives = 362/459 (78.87%), Query Frame = 1


Query: 1   MKLEDHKDFTGLLKGNEDANHKNTV-----------VGLDDLNEFDEVKAFVPSLTNSSK 60
           MKLED K+FT +LKGN DA+H NT            + LDD N++D+VKAFV  L NS K
Sbjct: 1   MKLEDQKEFTSILKGNMDAHHNNTAADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCK 60

Query: 61  VDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDE 120
           VDL EEDSELYMEKSIVECQLPELIV YKEN CNIVKDICIDDG P RDKL CGSS LDE
Sbjct: 61  VDLSEEDSELYMEKSIVECQLPELIVCYKENICNIVKDICIDDGTP-RDKLFCGSS-LDE 120

Query: 121 KAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPNQSDFEDLARTPEAEY 180
           + VC I PP +DWKDE    L++ DMFASDDSEHSESFG KDSPNQ D +DLA TPEAEY
Sbjct: 121 EDVCSINPPTKDWKDESVGELKQRDMFASDDSEHSESFGSKDSPNQCDSKDLASTPEAEY 180

Query: 181 DVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVL------EVPVLARVAEESY 240
           DV YFTDND   +PMTDL TES+KP+T+NK +P+PQSEQV       EVPVLA VA+ES+
Sbjct: 181 DVAYFTDND---MPMTDLVTESLKPLTDNKIKPHPQSEQVCIETTCSEVPVLAHVADESF 240

Query: 241 SDTREAISEVASSDLATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDN 300
            +TRE  SE  +S    E+ KN+DSA  +SYNSK+DKGNITFDFNS A TASDGLE CDN
Sbjct: 241 GNTRETTSESITS---AEDPKNSDSANGMSYNSKVDKGNITFDFNSLAFTASDGLERCDN 300

Query: 301 GDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHK 360
           GDLNSSAPSTSASV C ET+SSN LAS DK +  C++  SNPKR+EYEDL RVEYED  K
Sbjct: 301 GDLNSSAPSTSASVGCKETTSSNPLASADKSEPQCHNTSSNPKRVEYEDLPRVEYEDIRK 360

Query: 361 AEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSF 420
            EVGN DSH VSS+VQ GVGE S  S+  LGSL+SNSG IGYSGSIS RSDSSTTSTRSF
Sbjct: 361 TEVGNFDSHTVSSEVQQGVGETSF-SVAPLGSLMSNSGRIGYSGSISHRSDSSTTSTRSF 420

Query: 421 AFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           AFPILQ+EWNSSPVRMAK D+KHL+K RGWR G+LCCRF
Sbjct: 421 AFPILQTEWNSSPVRMAKPDRKHLQKHRGWRHGILCCRF 450

[Close]

BLAST of Cp4.1LG01g13120 vs. NCBI nr
Match: gi|659091282|ref|XP_008446468.1| (PREDICTED: dentin sialophosphoprotein isoform X1 [Cucumis melo])

HSP 1 Score: 583.6 bits (1503), Expect = 3.0e-163
Identity = 324/459 (70.59%), Postives = 362/459 (78.87%), Query Frame = 1


Query: 1   MKLEDHKDFTGLLKGNEDANHKNTV-----------VGLDDLNEFDEVKAFVPSLTNSSK 60
           MKLED K+FT +LKGN DA+H NT            + LDD N++D+VKAFV  L NS K
Sbjct: 35  MKLEDQKEFTSILKGNMDAHHNNTAADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCK 94

Query: 61  VDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDE 120
           VDL EEDSELYMEKSIVECQLPELIV YKEN CNIVKDICIDDG P RDKL CGSS LDE
Sbjct: 95  VDLSEEDSELYMEKSIVECQLPELIVCYKENICNIVKDICIDDGTP-RDKLFCGSS-LDE 154

Query: 121 KAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPNQSDFEDLARTPEAEY 180
           + VC I PP +DWKDE    L++ DMFASDDSEHSESFG KDSPNQ D +DLA TPEAEY
Sbjct: 155 EDVCSINPPTKDWKDESVGELKQRDMFASDDSEHSESFGSKDSPNQCDSKDLASTPEAEY 214

Query: 181 DVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVL------EVPVLARVAEESY 240
           DV YFTDND   +PMTDL TES+KP+T+NK +P+PQSEQV       EVPVLA VA+ES+
Sbjct: 215 DVAYFTDND---MPMTDLVTESLKPLTDNKIKPHPQSEQVCIETTCSEVPVLAHVADESF 274

Query: 241 SDTREAISEVASSDLATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDN 300
            +TRE  SE  +S    E+ KN+DSA  +SYNSK+DKGNITFDFNS A TASDGLE CDN
Sbjct: 275 GNTRETTSESITS---AEDPKNSDSANGMSYNSKVDKGNITFDFNSLAFTASDGLERCDN 334

Query: 301 GDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHK 360
           GDLNSSAPSTSASV C ET+SSN LAS DK +  C++  SNPKR+EYEDL RVEYED  K
Sbjct: 335 GDLNSSAPSTSASVGCKETTSSNPLASADKSEPQCHNTSSNPKRVEYEDLPRVEYEDIRK 394

Query: 361 AEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSF 420
            EVGN DSH VSS+VQ GVGE S  S+  LGSL+SNSG IGYSGSIS RSDSSTTSTRSF
Sbjct: 395 TEVGNFDSHTVSSEVQQGVGETSF-SVAPLGSLMSNSGRIGYSGSISHRSDSSTTSTRSF 454

Query: 421 AFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           AFPILQ+EWNSSPVRMAK D+KHL+K RGWR G+LCCRF
Sbjct: 455 AFPILQTEWNSSPVRMAKPDRKHLQKHRGWRHGILCCRF 484

[Close]

BLAST of Cp4.1LG01g13120 vs. NCBI nr
Match: gi|778705665|ref|XP_011655721.1| (PREDICTED: uncharacterized protein LOC101218906 isoform X2 [Cucumis sativus])

HSP 1 Score: 580.9 bits (1496), Expect = 1.9e-162
Identity = 324/459 (70.59%), Postives = 359/459 (78.21%), Query Frame = 1


Query: 1   MKLEDHKDFTGLLKGNEDANHKNT-----------VVGLDDLNEFDEVKAFVPSLTNSSK 60
           MKLED K+FT  LKGN DA+H NT            + LDD N++D+VKAFV  L NS K
Sbjct: 1   MKLEDQKEFTNNLKGNVDADHNNTDADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCK 60

Query: 61  VDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDE 120
            DL EEDSELYMEKS+VECQLPELIV YKEN CNIVKDICIDDG P RDKL CGSS LDE
Sbjct: 61  ADLSEEDSELYMEKSVVECQLPELIVCYKENICNIVKDICIDDGTP-RDKLFCGSS-LDE 120

Query: 121 KAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPNQSDFEDLARTPEAEY 180
           K VC ILPP +DWKDE    L++ DMFASDDSEHSESFG KDSPN+ D +DLA TPEAEY
Sbjct: 121 KDVCSILPPTKDWKDESVGELKQRDMFASDDSEHSESFGSKDSPNEYDSKDLAITPEAEY 180

Query: 181 DVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVL------EVPVLARVAEESY 240
           DV YFTDND   +PMTDL TES+KP+TNN+ +P+PQSEQV       EVPVL RVAEES+
Sbjct: 181 DVAYFTDND---MPMTDLVTESLKPLTNNEIKPHPQSEQVFIETTCSEVPVLVRVAEESF 240

Query: 241 SDTREAISEVASSDLATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDN 300
           S+TREA SE  +S    E+ K+ DSA  +SYNSK+DKGNITFDFNS ASTASDGLE  DN
Sbjct: 241 SNTREATSESITS---AEDPKHGDSANGMSYNSKVDKGNITFDFNSLASTASDGLERSDN 300

Query: 301 GDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHK 360
           GDLNSSAPSTSASV C ET+SSN LAS DKC+A C+   SNPK +EYEDL RVEYED  K
Sbjct: 301 GDLNSSAPSTSASVGCKETTSSNPLASADKCEAECHTTSSNPKHVEYEDLRRVEYEDIPK 360

Query: 361 AEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSF 420
            EVGN DSH VSS+V  GVGE S  S+  LGSL+SNSG IGYSGSIS RSDSSTTSTRSF
Sbjct: 361 TEVGNFDSHTVSSEVSQGVGETSF-SVAPLGSLISNSGRIGYSGSISHRSDSSTTSTRSF 420

Query: 421 AFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           AFPILQSEW SSPVRM K D+KHL+K RGWR G+LCCRF
Sbjct: 421 AFPILQSEWTSSPVRMVKPDRKHLQKHRGWRHGILCCRF 450

[Close]

BLAST of Cp4.1LG01g13120 vs. NCBI nr
Match: gi|778705661|ref|XP_011655720.1| (PREDICTED: uncharacterized protein LOC101218906 isoform X1 [Cucumis sativus])

HSP 1 Score: 580.9 bits (1496), Expect = 1.9e-162
Identity = 324/459 (70.59%), Postives = 359/459 (78.21%), Query Frame = 1


Query: 1   MKLEDHKDFTGLLKGNEDANHKNT-----------VVGLDDLNEFDEVKAFVPSLTNSSK 60
           MKLED K+FT  LKGN DA+H NT            + LDD N++D+VKAFV  L NS K
Sbjct: 35  MKLEDQKEFTNNLKGNVDADHNNTDADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCK 94

Query: 61  VDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDE 120
            DL EEDSELYMEKS+VECQLPELIV YKEN CNIVKDICIDDG P RDKL CGSS LDE
Sbjct: 95  ADLSEEDSELYMEKSVVECQLPELIVCYKENICNIVKDICIDDGTP-RDKLFCGSS-LDE 154

Query: 121 KAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPNQSDFEDLARTPEAEY 180
           K VC ILPP +DWKDE    L++ DMFASDDSEHSESFG KDSPN+ D +DLA TPEAEY
Sbjct: 155 KDVCSILPPTKDWKDESVGELKQRDMFASDDSEHSESFGSKDSPNEYDSKDLAITPEAEY 214

Query: 181 DVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVL------EVPVLARVAEESY 240
           DV YFTDND   +PMTDL TES+KP+TNN+ +P+PQSEQV       EVPVL RVAEES+
Sbjct: 215 DVAYFTDND---MPMTDLVTESLKPLTNNEIKPHPQSEQVFIETTCSEVPVLVRVAEESF 274

Query: 241 SDTREAISEVASSDLATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDN 300
           S+TREA SE  +S    E+ K+ DSA  +SYNSK+DKGNITFDFNS ASTASDGLE  DN
Sbjct: 275 SNTREATSESITS---AEDPKHGDSANGMSYNSKVDKGNITFDFNSLASTASDGLERSDN 334

Query: 301 GDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHK 360
           GDLNSSAPSTSASV C ET+SSN LAS DKC+A C+   SNPK +EYEDL RVEYED  K
Sbjct: 335 GDLNSSAPSTSASVGCKETTSSNPLASADKCEAECHTTSSNPKHVEYEDLRRVEYEDIPK 394

Query: 361 AEVGNSDSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSF 420
            EVGN DSH VSS+V  GVGE S  S+  LGSL+SNSG IGYSGSIS RSDSSTTSTRSF
Sbjct: 395 TEVGNFDSHTVSSEVSQGVGETSF-SVAPLGSLISNSGRIGYSGSISHRSDSSTTSTRSF 454

Query: 421 AFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           AFPILQSEW SSPVRM K D+KHL+K RGWR G+LCCRF
Sbjct: 455 AFPILQSEWTSSPVRMVKPDRKHLQKHRGWRHGILCCRF 484

[Close]

BLAST of Cp4.1LG01g13120 vs. NCBI nr
Match: gi|778705669|ref|XP_011655722.1| (PREDICTED: uncharacterized protein LOC101218906 isoform X3 [Cucumis sativus])

HSP 1 Score: 476.1 bits (1224), Expect = 6.7e-131
Identity = 279/453 (61.59%), Postives = 317/453 (69.98%), Query Frame = 1


Query: 1   MKLEDHKDFTGLLKGNEDANHKNT-----------VVGLDDLNEFDEVKAFVPSLTNSSK 60
           MKLED K+FT  LKGN DA+H NT            + LDD N++D+VKAFV  L NS K
Sbjct: 35  MKLEDQKEFTNNLKGNVDADHNNTDADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCK 94

Query: 61  VDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDE 120
            DL EEDSELYMEKS+VECQLPELIV YKEN CNIVKDICIDDG P RDKL CGSS LDE
Sbjct: 95  ADLSEEDSELYMEKSVVECQLPELIVCYKENICNIVKDICIDDGTP-RDKLFCGSS-LDE 154

Query: 121 KAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPNQSDFEDLARTPEAEY 180
           K VC ILPP +DWKDE    L++ DMFASDDSEHSESFG KDSPN+ D +DLA TPEAEY
Sbjct: 155 KDVCSILPPTKDWKDESVGELKQRDMFASDDSEHSESFGSKDSPNEYDSKDLAITPEAEY 214

Query: 181 DVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQSEQVLEVPVLARVAEESYSDTREA 240
           DV YFTDND   +PMTDL TES+KP+TNN+ +P+PQSEQV                    
Sbjct: 215 DVAYFTDND---MPMTDLVTESLKPLTNNEIKPHPQSEQVF---------------IETT 274

Query: 241 ISEVASSDLATEESKNNDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGDLNSS 300
            SEV       EES +N                 T +  S + T+++  +H D+    ++
Sbjct: 275 CSEVPVLVRVAEESFSN-----------------TREATSESITSAEDPKHGDS----AN 334

Query: 301 APSTSASVDCLETSSSNRLASTDKCQAHCYDYCSNPKRMEYEDLLRVEYEDSHKAEVGNS 360
           APSTSASV C ET+SSN LAS DKC+A C+   SNPK +EYEDL RVEYED  K EVGN 
Sbjct: 335 APSTSASVGCKETTSSNPLASADKCEAECHTTSSNPKHVEYEDLRRVEYEDIPKTEVGNF 394

Query: 361 DSHLVSSQVQHGVGEASVSSMVSLGSLLSNSGHIGYSGSISRRSDSSTTSTRSFAFPILQ 420
           DSH VSS+V  GVGE S S +  LGSL+SNSG IGYSGSIS RSDSSTTSTRSFAFPILQ
Sbjct: 395 DSHTVSSEVSQGVGETSFS-VAPLGSLISNSGRIGYSGSISHRSDSSTTSTRSFAFPILQ 445

Query: 421 SEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 443
           SEW SSPVRM K D+KHL+K RGWR G+LCCRF
Sbjct: 455 SEWTSSPVRMVKPDRKHLQKHRGWRHGILCCRF 445

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g13120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g13120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQY1_CUCSA	4.7e-131	61.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606850 PE=4 SV=1	[more]
B9RLG9_RICCO	2.8e-43	36.45	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1466920 PE=4 SV=1	[more]
A0A0D2PTD2_GOSRA	1.3e-40	35.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1	[more]
A0A0D2ND06_GOSRA	1.3e-40	35.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G147700 PE=4 SV=1	[more]
A0A0D2W4I9_GOSRA	4.9e-40	35.15	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G097400 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g13120 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03810.1	3.8e-31	31.77	18S pre-ribosomal assembly protein gar2-related	[more]
AT1G13650.2	1.5e-08	43.48	BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assemb...	[more]

BLAST of Cp4.1LG01g13120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091292\|ref\|XP_008446473.1\|	3.0e-163	70.59	PREDICTED: dentin sialophosphoprotein isoform X2 [Cucumis melo]	[more]
gi\|659091282\|ref\|XP_008446468.1\|	3.0e-163	70.59	PREDICTED: dentin sialophosphoprotein isoform X1 [Cucumis melo]	[more]
gi\|778705665\|ref\|XP_011655721.1\|	1.9e-162	70.59	PREDICTED: uncharacterized protein LOC101218906 isoform X2 [Cucumis sativus]	[more]
gi\|778705661\|ref\|XP_011655720.1\|	1.9e-162	70.59	PREDICTED: uncharacterized protein LOC101218906 isoform X1 [Cucumis sativus]	[more]
gi\|778705669\|ref\|XP_011655722.1\|	6.7e-131	61.59	PREDICTED: uncharacterized protein LOC101218906 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g13120.1	Cp4.1LG01g13120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 35..442 score: 1.1
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN	coord: 35..442 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g13120	Cucsa.284360	Cucumber (Gy14) v1	cgycpeB0750
Cp4.1LG01g13120	CmaCh18G010860	Cucurbita maxima (Rimu)	cmacpeB429
Cp4.1LG01g13120	CmaCh04G015800	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g13120	CmoCh04G016520	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g13120	CmoCh18G011110	Cucurbita moschata (Rifu)	cmocpeB392
Cp4.1LG01g13120	Cla020317	Watermelon (97103) v1	cpewmB427
Cp4.1LG01g13120	Csa5G606850	Cucumber (Chinese Long) v2	cpecuB442
Cp4.1LG01g13120	MELO3C012167	Melon (DHL92) v3.5.1	cpemeB363
Cp4.1LG01g13120	ClCG05G023550	Watermelon (Charleston Gray)	cpewcgB388
Cp4.1LG01g13120	CSPI05G24460	Wild cucumber (PI 183967)	cpecpiB442
Cp4.1LG01g13120	Lsi04G003480	Bottle gourd (USVL1VR-Ls)	cpelsiB352
Cp4.1LG01g13120	MELO3C012167.2	Melon (DHL92) v3.6.1	cpemedB423
Cp4.1LG01g13120	CsaV3_5G033470	Cucumber (Chinese Long) v3	cpecucB0546
Cp4.1LG01g13120	Bhi07G001204	Wax gourd	cpewgoB0557
Cp4.1LG01g13120	CsGy5G023960	Cucumber (Gy14) v2	cgybcpeB648
Cp4.1LG01g13120	Carg01772	Silver-seed gourd	carcpeB1177

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g13120	Cp4.1LG09g02320	Cucurbita pepo (Zucchini)	cpecpeB040

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g13120	Cucumber (Gy14) v2	cgybcpeB626
Cp4.1LG01g13120	Melon (DHL92) v3.6.1	cpemedB437
Cp4.1LG01g13120	Cucumber (Chinese Long) v3	cpecucB0518
Cp4.1LG01g13120	Wax gourd	cpewgoB0562