Carg01772 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01772
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	18S pre-ribosomal assembly protein gar2-related
Location	Cucurbita_argyrosperma_scaffold_003 : 360035 .. 362057 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATGCATGTCTTGACAAATTCCATTTGAACAGTCCATGTGAATCATGAAAGTTGGTAAATCTCATATTCTTCCCCTTTGCCCCTGCCCATAAAAAGTCAAAGAAAATAAAGTTTTCCTTGGGATTTATATTTTATTTCTTTTACAGAGGGCGAGCCTGTAGTTTCCCATTCAGATGCTAGCCCCAAGTTTATTCCCAAGTCTTTTGAGTGTGATAACGATGCTCTTGACTCTGGTGGGATGAAGCTTGAAGATCATAAAGATTTTACAGGCCTTCTCAAAAGTAACGAGAATGCCAATCACAAGAATAGTGTTGTAGGTCTTGATGATCTTAATGAATTTGACGAAGTTAAAGCCTTTGTGCCATCACTCACTAATTCTTCTAAAGTAGACTTGTTTGAGGAAGACTCGGAGTTATACATGGAAAAGAGTATTGTTGAATGTCAACTTCCTGAACTCATAGTTTGTTACAAAGAAAACAGCTGCAATATTGTGAAGGATATTTGTATTGACGACGGAGTACCTTCTCGAGATAAGCTCTTGTGTGGTAGTGGTAGTTTGGATGAGAAGGCTGTCTGTGTCATTCTCCCTCCCGAGGAAGATTGGAAGGACGAGTTGGCAAGAACGCTAGAGGAAGGAGATATGTTTGCTTCCGACGATTCAGAGCATTCGGAATCTTTTGGCAAAAAGGATTCACCCAAACAAAGCGATTTCGAGGATTTGGCTAGAACACCCGAGGCAGAATATGATGTGGATTATTTTACTGACAATGATATACTAAATCTTCCAATGACAGACTTGTTTACAGAGAGCGTAAAGCCATTGACCAACAATAAGAATGAGCCTAACCCTCAGTCTGAACAGGTATGTTTTTTCTTTTGGCATAATGGATGTTCAACCTACATCAAGAACATGTATCACTGTCTTTAGTTGAGACTTTCATTACTGTTCTTGTTTCTAGCTCGCATTATCATATGTCGAGTGTTATGCACAATTAATTGTATGGATCTCTTGGAGCTCTGGACGTTGTTATCAGTATGTTAGTTTAAAACTCTCTAGTTGTAGCCAAAGAATGTTGGGGTGGGGGTTGGCTATGACTGAAACTTTTTAATTTGAGTTCTTGTTGGCTCTTTCAACTTAGTCATGATGTAATTATGCTTGTGGGAAATGTGTGTGTTAGAAGGTGACTGTATTTGTTTCTTCTCATGCAGGTTTTTATCGAAACTACGAGTTTGGAAGTCCCTGTTTTGGCATGTGTAGCTGAAGAATCTTATAGTGACACCAGAGAAGAAATATCAGAAGTAGCTTCTTCAGATCTAGCAACTGAAGAGCCCAAAAATAGCGATTCTGCGGAGGATATATCATACAATAGTAAAATGGACAAAGGAAACATTACTTTTGATTTCAATTCTTTTGCATCCACAGCTAGTGATGGACTGGAGCATTGTGATAATGGTGGCTTGAACTCTTCAGCTCCTTCGACCAGTGCCTCGGTGGATTGCCTAGACACTAGCAGCTCCAACCGCTTAGCTTCAGCTGACAAATGTCAAGCACATTGTTACGATTACAGTAGTAACCCAAAACGTGTGGAGTATGAAGACTTGCTACGAGTGGAATATGAAGACTTACATAAGGCAGAAGTTGGGAATTCTGATAGTTATTCAGTTTCAAGCCAAGTTCAACATGGCGTAGGTGAAGCAAGTGTCTCTTCTATGGTATCTTTGGGGAGTCTGTTGTCTAATTCGGGCCGTATAGGTTACTCCGGCAGCATCTCTCGTCGTTCTGATAGCAGCACGACCAGCACCCATTCCTTTGCCTTTCCCATGTAAAACTCTTGATATCTCTTAATGTGTACATATTTCTTCTAATCATTATCGTCCGGAATTAATGGGAGCAAAATGTTTATCTTCCTGCAGATTACAATCCGAATGGAACAGTAGTCCTGTTAGAATGGCTAAAGCTGATCAAAAACATCTACGGAAGCTTCGGGGTTGGAGACAAGGCCTTCTATGCTGTAGATTC

mRNA sequence

TTTGATGCATGTCTTGACAAATTCCATTTGAACAGTCCATGTGAATCATGAAAGTTGAGGGCGAGCCTGTAGTTTCCCATTCAGATGCTAGCCCCAAGTTTATTCCCAAGTCTTTTGAGTGTGATAACGATGCTCTTGACTCTGGTGGGATGAAGCTTGAAGATCATAAAGATTTTACAGGCCTTCTCAAAAGTAACGAGAATGCCAATCACAAGAATAGTGTTGTAGGTCTTGATGATCTTAATGAATTTGACGAAGTTAAAGCCTTTGTGCCATCACTCACTAATTCTTCTAAAGTAGACTTGTTTGAGGAAGACTCGGAGTTATACATGGAAAAGAGTATTGTTGAATGTCAACTTCCTGAACTCATAGTTTGTTACAAAGAAAACAGCTGCAATATTGTGAAGGATATTTGTATTGACGACGGAGTACCTTCTCGAGATAAGCTCTTGTGTGGTAGTGGTAGTTTGGATGAGAAGGCTGTCTGTGTCATTCTCCCTCCCGAGGAAGATTGGAAGGACGAGTTGGCAAGAACGCTAGAGGAAGGAGATATGTTTGCTTCCGACGATTCAGAGCATTCGGAATCTTTTGGCAAAAAGGATTCACCCAAACAAAGCGATTTCGAGGATTTGGCTAGAACACCCGAGGCAGAATATGATGTGGATTATTTTACTGACAATGATATACTAAATCTTCCAATGACAGACTTGTTTACAGAGAGCGTAAAGCCATTGACCAACAATAAGAATGAGCCTAACCCTCAGTCTGAACAGGTTTTTATCGAAACTACGAGTTTGGAAGTCCCTGTTTTGGCATGTGTAGCTGAAGAATCTTATAGTGACACCAGAGAAGAAATATCAGAAGTAGCTTCTTCAGATCTAGCAACTGAAGAGCCCAAAAATAGCGATTCTGCGGAGGATATATCATACAATAGTAAAATGGACAAAGGAAACATTACTTTTGATTTCAATTCTTTTGCATCCACAGCTAGTGATGGACTGGAGCATTGTGATAATGGTGGCTTGAACTCTTCAGCTCCTTCGACCAGTGCCTCGGTGGATTGCCTAGACACTAGCAGCTCCAACCGCTTAGCTTCAGCTGACAAATGTCAAGCACATTGTTACGATTACAGTAGTAACCCAAAACGTGTGGAGTATGAAGACTTGCTACGAGTGGAATATGAAGACTTACATAAGGCAGAAGTTGGGAATTCTGATAGTTATTCAGTTTCAAGCCAAGTTCAACATGGCGTAGGTGAAGCAAGTGTCTCTTCTATGGTATCTTTGGGGAGTCTGTTGTCTAATTCGGGCCGTATAGGTTACTCCGGCAGCATCTCTCGTCGTTCTGATAGCAGCACGACCAGCACCCATTCCTTTGCCTTTCCCATATTACAATCCGAATGGAACAGTAGTCCTGTTAGAATGGCTAAAGCTGATCAAAAACATCTACGGAAGCTTCGGGGTTGGAGACAAGGCCTTCTATGCTGTAGATTC

Coding sequence (CDS)

ATGAAAGTTGAGGGCGAGCCTGTAGTTTCCCATTCAGATGCTAGCCCCAAGTTTATTCCCAAGTCTTTTGAGTGTGATAACGATGCTCTTGACTCTGGTGGGATGAAGCTTGAAGATCATAAAGATTTTACAGGCCTTCTCAAAAGTAACGAGAATGCCAATCACAAGAATAGTGTTGTAGGTCTTGATGATCTTAATGAATTTGACGAAGTTAAAGCCTTTGTGCCATCACTCACTAATTCTTCTAAAGTAGACTTGTTTGAGGAAGACTCGGAGTTATACATGGAAAAGAGTATTGTTGAATGTCAACTTCCTGAACTCATAGTTTGTTACAAAGAAAACAGCTGCAATATTGTGAAGGATATTTGTATTGACGACGGAGTACCTTCTCGAGATAAGCTCTTGTGTGGTAGTGGTAGTTTGGATGAGAAGGCTGTCTGTGTCATTCTCCCTCCCGAGGAAGATTGGAAGGACGAGTTGGCAAGAACGCTAGAGGAAGGAGATATGTTTGCTTCCGACGATTCAGAGCATTCGGAATCTTTTGGCAAAAAGGATTCACCCAAACAAAGCGATTTCGAGGATTTGGCTAGAACACCCGAGGCAGAATATGATGTGGATTATTTTACTGACAATGATATACTAAATCTTCCAATGACAGACTTGTTTACAGAGAGCGTAAAGCCATTGACCAACAATAAGAATGAGCCTAACCCTCAGTCTGAACAGGTTTTTATCGAAACTACGAGTTTGGAAGTCCCTGTTTTGGCATGTGTAGCTGAAGAATCTTATAGTGACACCAGAGAAGAAATATCAGAAGTAGCTTCTTCAGATCTAGCAACTGAAGAGCCCAAAAATAGCGATTCTGCGGAGGATATATCATACAATAGTAAAATGGACAAAGGAAACATTACTTTTGATTTCAATTCTTTTGCATCCACAGCTAGTGATGGACTGGAGCATTGTGATAATGGTGGCTTGAACTCTTCAGCTCCTTCGACCAGTGCCTCGGTGGATTGCCTAGACACTAGCAGCTCCAACCGCTTAGCTTCAGCTGACAAATGTCAAGCACATTGTTACGATTACAGTAGTAACCCAAAACGTGTGGAGTATGAAGACTTGCTACGAGTGGAATATGAAGACTTACATAAGGCAGAAGTTGGGAATTCTGATAGTTATTCAGTTTCAAGCCAAGTTCAACATGGCGTAGGTGAAGCAAGTGTCTCTTCTATGGTATCTTTGGGGAGTCTGTTGTCTAATTCGGGCCGTATAGGTTACTCCGGCAGCATCTCTCGTCGTTCTGATAGCAGCACGACCAGCACCCATTCCTTTGCCTTTCCCATATTACAATCCGAATGGAACAGTAGTCCTGTTAGAATGGCTAAAGCTGATCAAAAACATCTACGGAAGCTTCGGGGTTGGAGACAAGGCCTTCTATGCTGTAGATTC

Protein sequence

MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNSVVGLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLNSSAPSTSASVDCLDTSSSNRLASADKCQAHCYDYSSNPKRVEYEDLLRVEYEDLHKAEVGNSDSYSVSSQVQHGVGEASVSSMVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF

Homology

[Close]

BLAST of Carg01772 vs. NCBI nr
Match: XP_022956433.1 (uncharacterized protein LOC111458170 isoform X1 [Cucurbita moschata] >XP_022956434.1 uncharacterized protein LOC111458170 isoform X1 [Cucurbita moschata] >XP_022956436.1 uncharacterized protein LOC111458170 isoform X1 [Cucurbita moschata])

HSP 1 Score: 813.1 bits (2099), Expect = 4.9e-232
Identity = 476/482 (98.76%), Postives = 478/482 (99.17%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNSVV 60
           MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNE+ANHKNSVV
Sbjct: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNEDANHKNSVV 60

Query: 61  GLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK 120
           GLDDLNEFDEVKAFVPS+TNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK
Sbjct: 61  GLDDLNEFDEVKAFVPSITNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK 120

Query: 121 DICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180
           DICIDDGVPSRDKLLCGS SLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES
Sbjct: 121 DICIDDGVPSRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180

Query: 181 FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS 240
           FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS
Sbjct: 181 FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS 240

Query: 241 EQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSAEDISYNSKMDK 300
           EQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLA EEPKNSDSAEDISYNSKMDK
Sbjct: 241 EQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLAAEEPKNSDSAEDISYNSKMDK 300

Query: 301 GNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           GNITFDFNSFASTASDGLEHCDNGGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 GNITFDFNSFASTASDGLEHCDNGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS 420
           XXX PKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS
Sbjct: 361 XXXXPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS 420

Query: 421 GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 480
           GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC
Sbjct: 421 GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 480

Query: 481 RF 483
           RF
Sbjct: 481 RF 482

[Close]

BLAST of Carg01772 vs. NCBI nr
Match: XP_022956437.1 (uncharacterized protein LOC111458170 isoform X2 [Cucurbita moschata])

HSP 1 Score: 795.4 bits (2053), Expect = 1.1e-226
Identity = 470/482 (97.51%), Postives = 472/482 (97.93%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNSVV 60
           MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNE+ANHKNSVV
Sbjct: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNEDANHKNSVV 60

Query: 61  GLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK 120
           GLDDLNEFDEVKAFVPS+TNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK
Sbjct: 61  GLDDLNEFDEVKAFVPSITNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK 120

Query: 121 DICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180
           DICIDDGVPSRDKLLCGS SLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES
Sbjct: 121 DICIDDGVPSRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180

Query: 181 FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS 240
           FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS
Sbjct: 181 FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS 240

Query: 241 EQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSAEDISYNSKMDK 300
           EQV      LEVPVLACVAEESYSDTREEISEVASSDLA EEPKNSDSAEDISYNSKMDK
Sbjct: 241 EQV------LEVPVLACVAEESYSDTREEISEVASSDLAAEEPKNSDSAEDISYNSKMDK 300

Query: 301 GNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           GNITFDFNSFASTASDGLEHCDNGGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 GNITFDFNSFASTASDGLEHCDNGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS 420
           XXX PKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS
Sbjct: 361 XXXXPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS 420

Query: 421 GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 480
           GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC
Sbjct: 421 GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 476

Query: 481 RF 483
           RF
Sbjct: 481 RF 476

[Close]

BLAST of Carg01772 vs. NCBI nr
Match: XP_022956438.1 (uncharacterized protein LOC111458170 isoform X3 [Cucurbita moschata])

HSP 1 Score: 784.6 bits (2025), Expect = 1.9e-223
Identity = 465/482 (96.47%), Postives = 467/482 (96.89%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNSVV 60
           MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNE+ANHKNSVV
Sbjct: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNEDANHKNSVV 60

Query: 61  GLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK 120
           GLDDLNEFDEVKAFVPS+TNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK
Sbjct: 61  GLDDLNEFDEVKAFVPSITNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK 120

Query: 121 DICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180
           DICIDDGVPSRDKLLCGS SLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES
Sbjct: 121 DICIDDGVPSRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180

Query: 181 FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS 240
           FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS
Sbjct: 181 FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS 240

Query: 241 EQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSAEDISYNSKMDK 300
           EQ           VLACVAEESYSDTREEISEVASSDLA EEPKNSDSAEDISYNSKMDK
Sbjct: 241 EQ-----------VLACVAEESYSDTREEISEVASSDLAAEEPKNSDSAEDISYNSKMDK 300

Query: 301 GNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           GNITFDFNSFASTASDGLEHCDNGGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 GNITFDFNSFASTASDGLEHCDNGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS 420
           XXX PKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS
Sbjct: 361 XXXXPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS 420

Query: 421 GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 480
           GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC
Sbjct: 421 GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 471

Query: 481 RF 483
           RF
Sbjct: 481 RF 471

[Close]

BLAST of Carg01772 vs. NCBI nr
Match: XP_023525315.1 (uncharacterized protein LOC111788949 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525323.1 uncharacterized protein LOC111788949 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525332.1 uncharacterized protein LOC111788949 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 763.5 bits (1970), Expect = 4.4e-217
Identity = 421/482 (87.34%), Postives = 426/482 (88.38%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNSVV 60
           MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLK NE+ANHKN+VV
Sbjct: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKGNEDANHKNTVV 60

Query: 61  GLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVK 120
           GLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIV YKENSCNIVK
Sbjct: 61  GLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIVRYKENSCNIVK 120

Query: 121 DICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180
           DICIDDGVPSRDKLLCGS SLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES
Sbjct: 121 DICIDDGVPSRDKLLCGSSSLDEKAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSES 180

Query: 181 FGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQS 240
           FGKKDSP QSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKP+TNNKNEPNPQS
Sbjct: 181 FGKKDSPNQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPMTNNKNEPNPQS 240

Query: 241 EQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSAEDISYNSKMDK 300
           EQV      LEVPVLA VAEESYSDTRE ISEVASSDLATEE KN+DSAEDISYNSKMDK
Sbjct: 241 EQV------LEVPVLARVAEESYSDTREAISEVASSDLATEESKNNDSAEDISYNSKMDK 300

Query: 301 GNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           GNITFDFNSFASTASDGLEHCDNG LN                                 
Sbjct: 301 GNITFDFNSFASTASDGLEHCDNGDLNSSAPSTSASVDCLETSSSNRLASTDKCQAHCYD 360

Query: 361 XXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNS 420
              NPKR+EYEDLLXXXXXXXXXXXXXXX    VSSQVQHGVGEASVSSMVSLGSLLSNS
Sbjct: 361 YCSNPKRMEYEDLLXXXXXXXXXXXXXXXXXXLVSSQVQHGVGEASVSSMVSLGSLLSNS 420

Query: 421 GRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 480
           G IGYSGSISRRSDSSTTST SFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC
Sbjct: 421 GHIGYSGSISRRSDSSTTSTRSFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCC 476

Query: 481 RF 483
           RF
Sbjct: 481 RF 476

[Close]

BLAST of Carg01772 vs. NCBI nr
Match: XP_022956439.1 (uncharacterized protein LOC111458170 isoform X4 [Cucurbita moschata])

HSP 1 Score: 744.2 bits (1920), Expect = 2.8e-211
Identity = 442/448 (98.66%), Postives = 444/448 (99.11%), Query Frame = 0


Query: 35  MKLEDHKDFTGLLKSNENANHKNSVVGLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELY 94
           MKLEDHKDFTGLLKSNE+ANHKNSVVGLDDLNEFDEVKAFVPS+TNSSKVDLFEEDSELY
Sbjct: 1   MKLEDHKDFTGLLKSNEDANHKNSVVGLDDLNEFDEVKAFVPSITNSSKVDLFEEDSELY 60

Query: 95  MEKSIVECQLPELIVCYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEE 154
           MEKSIVECQLPELIVCYKENSCNIVKDICIDDGVPSRDKLLCGS SLDEKAVCVILPPEE
Sbjct: 61  MEKSIVECQLPELIVCYKENSCNIVKDICIDDGVPSRDKLLCGSSSLDEKAVCVILPPEE 120

Query: 155 DWKDELARTLEEGDMFASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDIL 214
           DWKDELARTLEEGDMFASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDIL
Sbjct: 121 DWKDELARTLEEGDMFASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDIL 180

Query: 215 NLPMTDLFTESVKPLTNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTREEISEVA 274
           NLPMTDLFTESVKPLTNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTREEISEVA
Sbjct: 181 NLPMTDLFTESVKPLTNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTREEISEVA 240

Query: 275 SSDLATEEPKNSDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLNXXXXXXX 334
           SSDLA EEPKNSDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGL XXXXXXX
Sbjct: 241 SSDLAAEEPKNSDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLXXXXXXXX 300

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSV 394
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX PKRVEYEDLLXXXXXXXXXXXXXXXDSYSV
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKRVEYEDLLXXXXXXXXXXXXXXXDSYSV 360

Query: 395 SSQVQHGVGEASVSSMVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNS 454
           SSQVQHGVGEASVSSMVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNS
Sbjct: 361 SSQVQHGVGEASVSSMVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNS 420

Query: 455 SPVRMAKADQKHLRKLRGWRQGLLCCRF 483
           SPVRMAKADQKHLRKLRGWRQGLLCCRF
Sbjct: 421 SPVRMAKADQKHLRKLRGWRQGLLCCRF 448

[Close]

BLAST of Carg01772 vs. TAIR10
Match: AT2G03810.1 (18S pre-ribosomal assembly protein gar2-related)

HSP 1 Score: 66.2 bits (160), Expect = 6.1e-11
Identity = 121/397 (30.48%), Postives = 174/397 (43.83%), Query Frame = 0


Query: 88  EEDSELYMEKSIVECQLPELIVCYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDEKAVC 147
           ++D   YM+K++  C LPE++VCYKEN+ +IVKDIC+D+GVP ++K L G          
Sbjct: 84  KKDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLFGE--------- 143

Query: 148 VILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDY 207
                    KD +  +       +++D   ++      S  +S  + +++  ++E+  D+
Sbjct: 144 ---------KDSVKSS-------STEDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDH 203

Query: 208 FTDNDILNLPMTDLFTESVKPLTNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTR 267
            TD D+      D F ++    +N   E    +E+V    T               S + 
Sbjct: 204 KTDRDVEESSGED-FADAEGTSSNYNQEHLIVTEEVKASPT------------HGLSPSE 263

Query: 268 EEISEVASSDLATEEPKNSDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLN 327
            E  E +  ++A  +  ++DS E ++    + + +     N                   
Sbjct: 264 IEPDENSKDEVAISQ--DNDSKECLTLGDILSREDEQKSLNQDXXXXXXXXXXXXXXXXX 323

Query: 328 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPKRVEYEDLLXXXXXXXXXXXXX 387
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             +               
Sbjct: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTTTSQEPNKTCNEPEKPETENHHQQNCL 383

Query: 388 XXDSYSVSSQVQHGVGEASVSS--MVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAF 447
             +SY          GE S S+                                  SFAF
Sbjct: 384 VENSYEDDKFSSSRFGETSFSAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSFAF 438

Query: 448 PILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 483
           PILQSEWNSSPVRMAKAD++  R+  GWR  LLCCRF
Sbjct: 444 PILQSEWNSSPVRMAKADKR--RQKGGWRHTLLCCRF 438

[Close]

BLAST of Carg01772 vs. TAIR10
Match: AT5G60880.1 (breaking of asymmetry in the stomatal lineage)

HSP 1 Score: 43.1 bits (100), Expect = 5.6e-04
Identity = 24/56 (42.86%), Postives = 31/56 (55.36%), Query Frame = 0


Query: 433 SDSSTTSTH------SFAFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 483
           SD S+ S+H      SFAFPIL  EW  SP +M ++D    +K +    G  CCRF
Sbjct: 207 SDKSSGSSHSDEGRGSFAFPILGVEWMGSPAKMPESDDLSPKKQKPVALGFQCCRF 262

[Close]

BLAST of Carg01772 vs. TrEMBL
Match: tr|A0A1S3BFZ0|A0A1S3BFZ0_CUCME (uncharacterized protein LOC103489197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489197 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 2.7e-162
Identity = 333/493 (67.55%), Postives = 372/493 (75.46%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNSV- 60
           MKVEGEP+V HS+ASPKF+PKSFECDND L+SGGMKLED K+FT +LK N +A+H N+  
Sbjct: 1   MKVEGEPIVCHSNASPKFVPKSFECDNDDLNSGGMKLEDQKEFTSILKGNMDAHHNNTAA 60

Query: 61  ----------VGLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIV 120
                     + LDD N++D+VKAFV  L NS KVDL EEDSELYMEKSIVECQLPELIV
Sbjct: 61  DGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCKVDLSEEDSELYMEKSIVECQLPELIV 120

Query: 121 CYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDM 180
           CYKEN CNIVKDICIDDG P RDKL CGS SLDE+ VC I PP +DWKDE    L++ DM
Sbjct: 121 CYKENICNIVKDICIDDGTP-RDKLFCGS-SLDEEDVCSINPPTKDWKDESVGELKQRDM 180

Query: 181 FASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPL 240
           FASDDSEHSESFG KDSP Q D +DLA TPEAEYDV YFTDND   +PMTDL TES+KPL
Sbjct: 181 FASDDSEHSESFGSKDSPNQCDSKDLASTPEAEYDVAYFTDND---MPMTDLVTESLKPL 240

Query: 241 TNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSA 300
           T+NK +P+PQSEQV IETT  EVPVLA VA+ES+ +TRE  SE  +S    E+PKNSDSA
Sbjct: 241 TDNKIKPHPQSEQVCIETTCSEVPVLAHVADESFGNTRETTSESITS---AEDPKNSDSA 300

Query: 301 EDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXXXXX 360
             +SYNSK+DKGNITFDFNS A TASDGLE CDNG LN                      
Sbjct: 301 NGMSYNSKVDKGNITFDFNSLAFTASDGLERCDNGDLNSSAPSTSASVGCKETTSSNPLA 360

Query: 361 XXXXXXXXXXXXXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSS 420
                         NPKRVEYEDL XXXXXXXXXXXX   DS++VSS+VQ GVGE S  S
Sbjct: 361 SADKSEPQCHNTSSNPKRVEYEDLXXXXXXXXXXXXXGNFDSHTVSSEVQQGVGETSF-S 420

Query: 421 MVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRK 480
           +  LGSL+SNSGRIGYSGSIS RSDSSTTST SFAFPILQ+EWNSSPVRMAK D+KHL+K
Sbjct: 421 VAPLGSLMSNSGRIGYSGSISHRSDSSTTSTRSFAFPILQTEWNSSPVRMAKPDRKHLQK 480

Query: 481 LRGWRQGLLCCRF 483
            RGWR G+LCCRF
Sbjct: 481 HRGWRHGILCCRF 484

[Close]

BLAST of Carg01772 vs. TrEMBL
Match: tr|A0A1S4DWE7|A0A1S4DWE7_CUCME (uncharacterized protein LOC103489197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489197 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.3e-144
Identity = 305/459 (66.45%), Postives = 340/459 (74.07%), Query Frame = 0


Query: 35  MKLEDHKDFTGLLKSNENANHKNSV-----------VGLDDLNEFDEVKAFVPSLTNSSK 94
           MKLED K+FT +LK N +A+H N+            + LDD N++D+VKAFV  L NS K
Sbjct: 1   MKLEDQKEFTSILKGNMDAHHNNTAADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCK 60

Query: 95  VDLFEEDSELYMEKSIVECQLPELIVCYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDE 154
           VDL EEDSELYMEKSIVECQLPELIVCYKEN CNIVKDICIDDG P RDKL CGS SLDE
Sbjct: 61  VDLSEEDSELYMEKSIVECQLPELIVCYKENICNIVKDICIDDGTP-RDKLFCGS-SLDE 120

Query: 155 KAVCVILPPEEDWKDELARTLEEGDMFASDDSEHSESFGKKDSPKQSDFEDLARTPEAEY 214
           + VC I PP +DWKDE    L++ DMFASDDSEHSESFG KDSP Q D +DLA TPEAEY
Sbjct: 121 EDVCSINPPTKDWKDESVGELKQRDMFASDDSEHSESFGSKDSPNQCDSKDLASTPEAEY 180

Query: 215 DVDYFTDNDILNLPMTDLFTESVKPLTNNKNEPNPQSEQVFIETTSLEVPVLACVAEESY 274
           DV YFTDND   +PMTDL TES+KPLT+NK +P+PQSEQV IETT  EVPVLA VA+ES+
Sbjct: 181 DVAYFTDND---MPMTDLVTESLKPLTDNKIKPHPQSEQVCIETTCSEVPVLAHVADESF 240

Query: 275 SDTREEISEVASSDLATEEPKNSDSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDN 334
            +TRE  SE  +S    E+PKNSDSA  +SYNSK+DKGNITFDFNS A TASDGLE CDN
Sbjct: 241 GNTRETTSESITS---AEDPKNSDSANGMSYNSKVDKGNITFDFNSLAFTASDGLERCDN 300

Query: 335 GGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPKRVEYEDLLXXXXXXXXX 394
           G LN                                    NPKRVEYEDL XXXXXXXXX
Sbjct: 301 GDLNSSAPSTSASVGCKETTSSNPLASADKSEPQCHNTSSNPKRVEYEDLXXXXXXXXXX 360

Query: 395 XXXXXXDSYSVSSQVQHGVGEASVSSMVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSF 454
           XXX   DS++VSS+VQ GVGE S  S+  LGSL+SNSGRIGYSGSIS RSDSSTTST SF
Sbjct: 361 XXXGNFDSHTVSSEVQQGVGETSF-SVAPLGSLMSNSGRIGYSGSISHRSDSSTTSTRSF 420

Query: 455 AFPILQSEWNSSPVRMAKADQKHLRKLRGWRQGLLCCRF 483
           AFPILQ+EWNSSPVRMAK D+KHL+K RGWR G+LCCRF
Sbjct: 421 AFPILQTEWNSSPVRMAKPDRKHLQKHRGWRHGILCCRF 450

[Close]

BLAST of Carg01772 vs. TrEMBL
Match: tr|A0A1S4DWG5|A0A1S4DWG5_CUCME (uncharacterized protein LOC103489197 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489197 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 2.5e-139
Identity = 304/493 (61.66%), Postives = 344/493 (69.78%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNSV- 60
           MKVEGEP+V HS+ASPKF+PKSFECDND L+SGGMKLED K+FT +LK N +A+H N+  
Sbjct: 1   MKVEGEPIVCHSNASPKFVPKSFECDNDDLNSGGMKLEDQKEFTSILKGNMDAHHNNTAA 60

Query: 61  ----------VGLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIV 120
                     + LDD N++D+VKAFV  L NS KVDL EEDSELYMEKSIVECQLPELIV
Sbjct: 61  DGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCKVDLSEEDSELYMEKSIVECQLPELIV 120

Query: 121 CYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDM 180
           CYKEN CNIVKDICIDDG P RDKL CGS SLDE+ VC I PP +DWKDE    L++ DM
Sbjct: 121 CYKENICNIVKDICIDDGTP-RDKLFCGS-SLDEEDVCSINPPTKDWKDESVGELKQRDM 180

Query: 181 FASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPL 240
           FASDDSEHSESFG KDSP Q D +DLA TPEAEYDV YFTDND   +PMTDL TES+KPL
Sbjct: 181 FASDDSEHSESFGSKDSPNQCDSKDLASTPEAEYDVAYFTDND---MPMTDLVTESLKPL 240

Query: 241 TNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSA 300
           T+NK +P+PQSEQV IETT  EVPVLA VA+ES+ +TRE  SE  +S    E+PKNSD  
Sbjct: 241 TDNKIKPHPQSEQVCIETTCSEVPVLAHVADESFGNTRETTSESITS---AEDPKNSDXX 300

Query: 301 EDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXXXXX 360
                                ++  S+    C N                          
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXSADKSE--PQCHN-------------------------- 360

Query: 361 XXXXXXXXXXXXXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSS 420
                         NPKRVEYEDL XXXXXXXXXXXX   DS++VSS+VQ GVGE S  S
Sbjct: 361 -----------TSSNPKRVEYEDLXXXXXXXXXXXXXGNFDSHTVSSEVQQGVGETSF-S 420

Query: 421 MVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRK 480
           +  LGSL+SNSGRIGYSGSIS RSDSSTTST SFAFPILQ+EWNSSPVRMAK D+KHL+K
Sbjct: 421 VAPLGSLMSNSGRIGYSGSISHRSDSSTTSTRSFAFPILQTEWNSSPVRMAKPDRKHLQK 445

Query: 481 LRGWRQGLLCCRF 483
            RGWR G+LCCRF
Sbjct: 481 HRGWRHGILCCRF 445

[Close]

BLAST of Carg01772 vs. TrEMBL
Match: tr|A0A0A0KQY1|A0A0A0KQY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606850 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 6.1e-138
Identity = 304/493 (61.66%), Postives = 346/493 (70.18%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSGGMKLEDHKDFTGLLKSNENANHKNS-- 60
           MKVEGEP+V HS+ASPKF+PKSFECDNDAL+SGGMKLED K+FT  LK N +A+H N+  
Sbjct: 1   MKVEGEPIVCHSNASPKFVPKSFECDNDALNSGGMKLEDQKEFTNNLKGNVDADHNNTDA 60

Query: 61  ---------VVGLDDLNEFDEVKAFVPSLTNSSKVDLFEEDSELYMEKSIVECQLPELIV 120
                     + LDD N++D+VKAFV  L NS K DL EEDSELYMEKS+VECQLPELIV
Sbjct: 61  DGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCKADLSEEDSELYMEKSVVECQLPELIV 120

Query: 121 CYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDWKDELARTLEEGDM 180
           CYKEN CNIVKDICIDDG P RDKL CGS SLDEK VC ILPP +DWKDE    L++ DM
Sbjct: 121 CYKENICNIVKDICIDDGTP-RDKLFCGS-SLDEKDVCSILPPTKDWKDESVGELKQRDM 180

Query: 181 FASDDSEHSESFGKKDSPKQSDFEDLARTPEAEYDVDYFTDNDILNLPMTDLFTESVKPL 240
           FASDDSEHSESFG KDSP + D +DLA TPEAEYDV YFTDND   +PMTDL TES+KPL
Sbjct: 181 FASDDSEHSESFGSKDSPNEYDSKDLAITPEAEYDVAYFTDND---MPMTDLVTESLKPL 240

Query: 241 TNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTREEISEVASSDLATEEPKNSDSA 300
           TNN+ +P+PQSEQVFIETT  EVPVL  VAEES+S+TRE  SE  +S    E+PK+ DSA
Sbjct: 241 TNNEIKPHPQSEQVFIETTCSEVPVLVRVAEESFSNTREATSESITS---AEDPKHGDSA 300

Query: 301 EDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXXXXX 360
              S ++ +             +T+S+ L   D                           
Sbjct: 301 NAPSTSASV---------GCKETTSSNPLASADK-------------------------- 360

Query: 361 XXXXXXXXXXXXXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEASVSS 420
                         NPK VEY    XXXXXXXXXXXXXX DS++VSS+V  GVGE S  S
Sbjct: 361 ----CEAECHTTSSNPKHVEYXXXXXXXXXXXXXXXXXXFDSHTVSSEVSQGVGETSF-S 420

Query: 421 MVSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSPVRMAKADQKHLRK 480
           +  LGSL+SNSGRIGYSGSIS RSDSSTTST SFAFPILQSEW SSPVRM K D+KHL+K
Sbjct: 421 VAPLGSLISNSGRIGYSGSISHRSDSSTTSTRSFAFPILQSEWTSSPVRMVKPDRKHLQK 445

Query: 481 LRGWRQGLLCCRF 483
            RGWR G+LCCRF
Sbjct: 481 HRGWRHGILCCRF 445

[Close]

BLAST of Carg01772 vs. TrEMBL
Match: tr|A0A2I4HW60|A0A2I4HW60_9ROSI (uncharacterized protein LOC109022047 isoform X3 OS=Juglans regia OX=51240 GN=LOC109022047 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 6.7e-52
Identity = 183/566 (32.33%), Postives = 263/566 (46.47%), Query Frame = 0


Query: 1   MKVEGEPVVSHSDASPKFIPKSFECDNDALDSG----GMKLEDHKDFTGLLKSNE----- 60
           MK++ EPV  HS    K   K F+ ++ ALDS      + + +++     LK +E     
Sbjct: 1   MKLDSEPVFCHSTLGHKPDSKPFDYNDIALDSAMKSQNLIMTENQSLLCDLKGDEKDAVP 60

Query: 61  --NANHKN------------SVVGLDDLNEFDEVKAFVPSLTNSS-KVDLFEEDSELYME 120
             NA +              S+V +++ N+ DEVK FV     SS K + F++D    M+
Sbjct: 61  FSNATNDGDGWTAIKFDCSMSMVDINNENK-DEVKDFVALHNQSSQKTESFDKDLHFVMD 120

Query: 121 KSIVECQLPELIVCYKENSCNIVKDICIDDGVPSRDKLLCGSGSLDEKAVCVILPPEEDW 180
           K ++EC+LPEL VCYK ++ ++VKDIC+D+GV SR+K+L  SG  D+K VC++LPP++D 
Sbjct: 121 KGVMECELPELTVCYKGSTYHVVKDICVDEGVHSREKILFESGR-DKKTVCIVLPPDKDQ 180

Query: 181 KDELARTLEEGDMFASDDSEHS-ESFGKKDSPKQSDFEDLARTPE-------AEYDVDYF 240
             ELA+  E+ D+   D    S E++  KDS  Q D +D  +T E        +     F
Sbjct: 181 NKELAKEKEDIDISGPDGLNFSAENYSDKDSTNQYDSKDSMQTGEDATGSILTDASKKMF 240

Query: 241 TDNDILNLPMTDLFTESVKPLTNNKNEPNPQSEQVFIETTSLEVPVLACVAEESYSDTRE 300
              ++L +  + +       L+N+ N+   Q  QV+ E   L  P L    EES + +  
Sbjct: 241 FPGNMLPMVASGVCASQFDCLSNDSNKVEQQPFQVYGERPILAGPALVSAVEESNNSSGN 300

Query: 301 E------------------------------------------ISEVASSDLATEEPKNS 360
           +                                                           
Sbjct: 301 KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 DSAEDISYNSKMDKGNITFDFNSFASTASDGLEHCDNGGLNXXXXXXXXXXXXXXXXXXX 420
               ++ YNSK++ G+ITFDF+S   + S  LE  +NG                      
Sbjct: 361 XXVNELFYNSKVESGSITFDFDSLEPSDSGRLEGLENG---------------------- 420

Query: 421 XXXXXXXXXXXXXXXXXNPKRVEYEDLLXXXXXXXXXXXXXXXDSYSVSSQVQHGVGEAS 480
                              K  + E+ L               D+++VS + QH +GE S
Sbjct: 421 -----------DSECHETQKTSKVENGL--------------SDAHTVSRRHQHALGETS 480

Query: 481 VSSM----------VSLGSLLSNSGRIGYSGSISRRSDSSTTSTHSFAFPILQSEWNSSP 483
            S++           +L SL++ SG +GYSGSIS RSDSSTTST SFAFPILQSEWNSSP
Sbjct: 481 FSAVGRGEESCSAAGTLSSLINYSGPMGYSGSISLRSDSSTTSTRSFAFPILQSEWNSSP 517

The following BLAST results are available for this feature:

BLAST of Carg01772 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956433.1	4.9e-232	98.76	uncharacterized protein LOC111458170 isoform X1 [Cucurbita moschata] >XP_0229564...	[more]
XP_022956437.1	1.1e-226	97.51	uncharacterized protein LOC111458170 isoform X2 [Cucurbita moschata]	[more]
XP_022956438.1	1.9e-223	96.47	uncharacterized protein LOC111458170 isoform X3 [Cucurbita moschata]	[more]
XP_023525315.1	4.4e-217	87.34	uncharacterized protein LOC111788949 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022956439.1	2.8e-211	98.66	uncharacterized protein LOC111458170 isoform X4 [Cucurbita moschata]	[more]

BLAST of Carg01772 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03810.1	6.1e-11	30.48	18S pre-ribosomal assembly protein gar2-related	[more]
AT5G60880.1	5.6e-04	42.86	breaking of asymmetry in the stomatal lineage	[more]

BLAST of Carg01772 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg01772 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BFZ0\|A0A1S3BFZ0_CUCME	2.7e-162	67.55	uncharacterized protein LOC103489197 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DWE7\|A0A1S4DWE7_CUCME	3.3e-144	66.45	uncharacterized protein LOC103489197 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4DWG5\|A0A1S4DWG5_CUCME	2.5e-139	61.66	uncharacterized protein LOC103489197 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KQY1\|A0A0A0KQY1_CUCSA	6.1e-138	61.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606850 PE=4 SV=1	[more]
tr\|A0A2I4HW60\|A0A2I4HW60_9ROSI	6.7e-52	32.33	uncharacterized protein LOC109022047 isoform X3 OS=Juglans regia OX=51240 GN=LOC...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01772-RA	Carg01772-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..293
None	No IPR available	PANTHER	PTHR33914:SF2	18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-RELATED PROTEIN	coord: 52..482
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 52..482

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01772	Cla020317	Watermelon (97103) v1	carwmB0842
Carg01772	Csa5G606850	Cucumber (Chinese Long) v2	carcuB0857
Carg01772	MELO3C012167	Melon (DHL92) v3.5.1	carmeB0834
Carg01772	ClCG05G023550	Watermelon (Charleston Gray)	carwcgB0816
Carg01772	CSPI05G24460	Wild cucumber (PI 183967)	carcpiB0877
Carg01772	Cucsa.284360	Cucumber (Gy14) v1	carcgyB0968
Carg01772	CmaCh04G015800	Cucurbita maxima (Rimu)	carcmaB1170
Carg01772	CmaCh18G010860	Cucurbita maxima (Rimu)	carcmaB1167
Carg01772	CmoCh04G016520	Cucurbita moschata (Rifu)	carcmoB1138
Carg01772	CmoCh18G011110	Cucurbita moschata (Rifu)	carcmoB1135
Carg01772	Lsi04G003480	Bottle gourd (USVL1VR-Ls)	carlsiB767
Carg01772	Cp4.1LG09g02320	Cucurbita pepo (Zucchini)	carcpeB1169
Carg01772	Cp4.1LG01g13120	Cucurbita pepo (Zucchini)	carcpeB1177
Carg01772	CsGy5G023960	Cucumber (Gy14) v2	carcgybB0831
Carg01772	MELO3C012167.2	Melon (DHL92) v3.6.1	carmedB0846
Carg01772	CsaV3_5G033470	Cucumber (Chinese Long) v3	carcucB0881
Carg01772	Cla97C05G105530	Watermelon (97103) v2	carwmbB0878
Carg01772	Bhi07G001204	Wax gourd	carwgoB0983

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01772	Carg09186	Silver-seed gourd	carcarB538

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01772	Watermelon (97103) v2	carwmbB0875
Carg01772	Wax gourd	carwgoB0986