Cp4.1LG01g12570 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g12570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description40S ribosomal protein S9, putative
LocationCp4.1LG01 : 8735129 .. 8737456 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTTCCCCCCACTTCGGCGCTTCTCGTGTTTAGGGCTTTTGATCGAGATCGCGGTCGGGGCTGAAGCCGCTGCAGAGAAGAAAGCATGGTGCACGTCTCCTTCTATAGGAACTGTGAGTATACTCAACTCAGCAACTTCCTGAAACTGCATATCTATCCTCGCTTTGTTCATATATATGCTTCCTTTTATTGCCTTTAGTTTTTGGATCTTCTATTTCTCTTGTGATTTTCATCTGGTTTTCTTTTGCACATGTTAGGCTACTGGGTTAGTCCTAGGTTAGATGGAACCAATGGGGAACGTCTGTTTCGGTTTACATGGTCGTGATATTACAAACCATGGGGCCTCAGATTTCTAGAATTAAATTTATCGTGCTCGAGAATCTTCCCTGTTCTTTCAAAATTTTATTCACTTCATTTTATGATGGTCAATATATGACATAGTAGGTGTTACATCAATTTTTCAAAAAATGTTGCTTTACATAATGTCTGTTTCTTGGTTCTGTTGCTGAGAACCATGATTACTGAATACTGGCCTCTTTCATTATATAGATGGGAAGACTTTTAAGAAACCTCGACGCCCTTATGAGAAGGAGCGTTTGGATGCAGAACTTAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGCCAGGATGCTTTTAACTCTTGACGAAAAGAATCCCCGTAGGATTTTTGAGGGAGAGGCCCTGCTTAGGAGGATGAACAGATACGGTCTTTTGGATGAGAGTCAAAACAAGCTCGATTATGTCTTGGCTCTTACTGTCGAGAATTTCCTTGAGCGTCGTCTTCAAACTCTCGTGTTTAAGTCTGGAATGGCCAAGTCTATCCACCATGCCAGAGTGCTCATCAGACAGAAGCATATAAGGTAGAGTGTCTTCTTTCTGCATTGTTGCACTTGTACTTCTTACTCATCAATGTATATCAACATCTGTTTGTAGTTATTTTATATAACATACGCTTAAATTACATAGTTGGTTTCAAATATGCTCCTCCGGCTTCAAAAGCTTACTTTTTTACCAATTAGTTGGTTTCAATGAAATTCTGATTTGGCAATTGAGCTTCAGCTATAGACGTTTAGGGTTTAAGAGGAAAAAGGCAACTGATTTTTCTTGTCTTCACCCTTTATTATTAACCAGCGGAATATGTGATCTTCCAAAATCAGTGGTCAAAAGGTAAGGTGGGTCTTGGAAAATGATCAGATATCACGAATTAGCTACTCATGTTATGTATCACCAGGAGGGCTACTGTTAACTAATTCTTGTATTTGTTTATTTCACGGATGAATTTAAGTTTTTTCCCCCTAGACAATTGAGAAGTTCGATTGTTAATTGAAGCATTTATTACAGGGCATAACTGAAACCAACCCGAATACTTATGGGGTATTTTAGGCACTTCAGCATTCTTTTTTTCTTTAGCTGTCTTTAATAGTTTTTGAACTATCTATGAGATTCTTTATGCTGGATAGACAATTGTTGTGCGATGAATATAGACTCTGAAACATTTATTGCTCATGTTTTCATCTATTACATTTGGTTCATGTGCATTTTTAGGGTTGGGAGGCAAGTTGTTAACATCCCTTCTTTCATGGTAAGAGTCGATTCCCAGAAGCACATAGACTTCTCTCTCACTAGTCCGTTTGGAGGTGGTCGCCCCGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCTGCCAAGAAGGCCGCAGGTGGTGATGGAGATGAAGAAGATGAAGATTGAGTTTCTGACTTAAAACTCATCATCTGAGACAGTAAAGATTAGCCAATGGTCTCAGGTATCTGAGATTAACCTTTATGTCCTATTTCCTCCTCCAGCTAAACCTATCGTAATATTTTTCACTTAGAGATCTTGTTTGTTTTTTGGTGGTGGGACTAGTTTTCAATTTTGGACAAGCTTCTCTTCGGACTTAGTTGACATAGTTTTCTTGCCATGATTGGACTTTTTTACTCAAAATTCCTCCGCATCATGAATGTATTGAGTTGATTTGGTCTAGCTCAGCTTGTTGTATCTAGAAATGTGATCCGTTTCAAGATTTCAATGAATTTTAATTCCTAGGCTCGCGAGCTCTTGAAATTAAAATCTACTTCCAACGGATGAAGGTAGCTAAGGATTAAAACTTTAAAGCATTATTGTTATTTGTCATATATATTCTCGTATCCAGGGTCTTTCGAGAGCAATGTGTTAGAAGTTTGCTCTATTGATTCAAAATGGCTGAGCCTAAGAGAGTTGAGGGTTGGAATAAGAA

mRNA sequence

AAGCTTCCCCCCACTTCGGCGCTTCTCGTGTTTAGGGCTTTTGATCGAGATCGCGGTCGGGGCTGAAGCCGCTGCAGAGAAGAAAGCATGGTGCACGTCTCCTTCTATAGGAACTATGGGAAGACTTTTAAGAAACCTCGACGCCCTTATGAGAAGGAGCGTTTGGATGCAGAACTTAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGCCAGGATGCTTTTAACTCTTGACGAAAAGAATCCCCGTAGGATTTTTGAGGGAGAGGCCCTGCTTAGGAGGATGAACAGATACGGTCTTTTGGATGAGAGTCAAAACAAGCTCGATTATGTCTTGGCTCTTACTGTCGAGAATTTCCTTGAGCGTCGTCTTCAAACTCTCGTGTTTAAGTCTGGAATGGCCAAGTCTATCCACCATGCCAGAGTGCTCATCAGACAGAAGCATATAAGGGTTGGGAGGCAAGTTGTTAACATCCCTTCTTTCATGGTAAGAGTCGATTCCCAGAAGCACATAGACTTCTCTCTCACTAGTCCGTTTGGAGGTGGTCGCCCCGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCTGCCAAGAAGGCCGCAGGTGGTGATGGAGATGAAGAAGATGAAGATTGAGTTTCTGACTTAAAACTCATCATCTGAGACAGTAAAGATTAGCCAATGGTCTCAGGTATCTGAGATTAACCTTTATGTCCTATTTCCTCCTCCAGCTAAACCTATCGTAATATTTTTCACTTAGAGATCTTGTTTGTTTTTTGGTGGTGGGACTAGTTTTCAATTTTGGACAAGCTTCTCTTCGGACTTAGTTGACATAGTTTTCTTGCCATGATTGGACTTTTTTACTCAAAATTCCTCCGCATCATGAATGTATTGAGTTGATTTGGTCTAGCTCAGCTTGTTGTATCTAGAAATGTGATCCGTTTCAAGATTTCAATGAATTTTAATTCCTAGGCTCGCGAGCTCTTGAAATTAAAATCTACTTCCAACGGATGAAGGTAGCTAAGGATTAAAACTTTAAAGCATTATTGTTATTTGTCATATATATTCTCGTATCCAGGGTCTTTCGAGAGCAATGTGTTAGAAGTTTGCTCTATTGATTCAAAATGGCTGAGCCTAAGAGAGTTGAGGGTTGGAATAAGAA

Coding sequence (CDS)

ATGGTGCACGTCTCCTTCTATAGGAACTATGGGAAGACTTTTAAGAAACCTCGACGCCCTTATGAGAAGGAGCGTTTGGATGCAGAACTTAAACTTGTAGGTGAATATGGGCTTCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCATTGAGCCGAATCCGTAATAATGCCAGGATGCTTTTAACTCTTGACGAAAAGAATCCCCGTAGGATTTTTGAGGGAGAGGCCCTGCTTAGGAGGATGAACAGATACGGTCTTTTGGATGAGAGTCAAAACAAGCTCGATTATGTCTTGGCTCTTACTGTCGAGAATTTCCTTGAGCGTCGTCTTCAAACTCTCGTGTTTAAGTCTGGAATGGCCAAGTCTATCCACCATGCCAGAGTGCTCATCAGACAGAAGCATATAAGGGTTGGGAGGCAAGTTGTTAACATCCCTTCTTTCATGGTAAGAGTCGATTCCCAGAAGCACATAGACTTCTCTCTCACTAGTCCGTTTGGAGGTGGTCGCCCCGGAAGGGTGAAGAGAAAGAACCAGAAGGCAGCTGCCAAGAAGGCCGCAGGTGGTGATGGAGATGAAGAAGATGAAGATTGA

Protein sequence

MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDGDEEDED
Homology
[Close]
BLAST of Cp4.1LG01g12570 vs. Swiss-Prot
Match: RS92_ARATH (40S ribosomal protein S9-2 OS=Arabidopsis thaliana GN=RPS9C PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 2.5e-98
Identity = 179/197 (90.86%), Postives = 192/197 (97.46%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of Cp4.1LG01g12570 vs. Swiss-Prot
Match: RS91_ARATH (40S ribosomal protein S9-1 OS=Arabidopsis thaliana GN=RPS9B PE=1 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 9.4e-93
Identity = 172/198 (86.87%), Postives = 190/198 (95.96%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of Cp4.1LG01g12570 vs. Swiss-Prot
Match: RS9_PODAS (40S ribosomal protein S9 OS=Podospora anserina GN=RPS9 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.7e-71
Identity = 140/191 (73.30%), Postives = 164/191 (85.86%), Query Frame = 1 

Query: 8   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEK 67
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR  AR LLTLDEK
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 68  NPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 127
           +P+R+FEG AL+RR+ R G+LDES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 128 RVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAA 187
           RVLIRQ+HIRVG+Q+VN+PSF+VR+DSQKHIDF+LTSPFGGGRPGRV+RK     AK A 
Sbjct: 124 RVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKK----AKAAE 183

Query: 188 GGDGD-EEDED 198
           GGDGD EEDE+
Sbjct: 184 GGDGDAEEDEE 190

[Close]
BLAST of Cp4.1LG01g12570 vs. Swiss-Prot
Match: RS9_BOVIN (40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.2e-69
Identity = 132/184 (71.74%), Postives = 155/184 (84.24%), Query Frame = 1 

Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDG 191
           RQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKRKN K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]
BLAST of Cp4.1LG01g12570 vs. Swiss-Prot
Match: RS9_HUMAN (40S ribosomal protein S9 OS=Homo sapiens GN=RPS9 PE=1 SV=3)

HSP 1 Score: 261.5 bits (667), Expect = 7.2e-69
Identity = 132/184 (71.74%), Postives = 155/184 (84.24%), Query Frame = 1 

Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKAAAKKAAGGDG 191
           RQ+HIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKRKN K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]
BLAST of Cp4.1LG01g12570 vs. TrEMBL
Match: A0A0A0KSN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604980 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.2e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. TrEMBL
Match: W9QV98_9ROSA (40S ribosomal protein S9-2 OS=Morus notabilis GN=L484_006534 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-102
Identity = 193/197 (97.97%), Postives = 196/197 (99.49%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNR+GLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRHGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGD ++ED
Sbjct: 181 AAAKKAAGGDGDGDEED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. TrEMBL
Match: D7FBA7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g00460 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-102
Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSF+VR+DSQKHIDFSLTSP GGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFLVRMDSQKHIDFSLTSPLGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. TrEMBL
Match: A0A059ARY5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01938 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.0e-101
Identity = 191/197 (96.95%), Postives = 195/197 (98.98%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN K
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNTK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AA+KKA+GGDG+EEDED
Sbjct: 181 AASKKASGGDGEEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. TrEMBL
Match: A0A059CYL4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00467 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.3e-101
Identity = 192/197 (97.46%), Postives = 194/197 (98.48%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNI SFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN K
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIASFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNTK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKA+GGDGDEEDED
Sbjct: 181 AAAKKASGGDGDEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. TAIR10
Match: AT5G39850.1 (AT5G39850.1 Ribosomal protein S4)

HSP 1 Score: 359.4 bits (921), Expect = 1.4e-99
Identity = 179/197 (90.86%), Postives = 192/197 (97.46%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKR+N++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of Cp4.1LG01g12570 vs. TAIR10
Match: AT5G15200.1 (AT5G15200.1 Ribosomal protein S4)

HSP 1 Score: 340.9 bits (873), Expect = 5.3e-94
Identity = 172/198 (86.87%), Postives = 190/198 (95.96%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHH+RVLIRQ+HIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKR+N+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of Cp4.1LG01g12570 vs. NCBI nr
Match: gi|449434792|ref|XP_004135180.1| (PREDICTED: 40S ribosomal protein S9-2 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 3.1e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. NCBI nr
Match: gi|719965609|ref|XP_010256989.1| (PREDICTED: 40S ribosomal protein S9-2-like [Nelumbo nucifera])

HSP 1 Score: 382.9 bits (982), Expect = 3.4e-103
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSP GGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. NCBI nr
Match: gi|1009132749|ref|XP_015883538.1| (PREDICTED: 40S ribosomal protein S9-2 [Ziziphus jujuba])

HSP 1 Score: 382.9 bits (982), Expect = 3.4e-103
Identity = 194/197 (98.48%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDENQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVR+DSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRLDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. NCBI nr
Match: gi|1009124995|ref|XP_015879372.1| (PREDICTED: 40S ribosomal protein S9-2 [Ziziphus jujuba])

HSP 1 Score: 380.6 bits (976), Expect = 1.7e-102
Identity = 192/197 (97.46%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLL+E+QNKLDYVLALTVENFLERRLQT+VFK+GM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLEENQNKLDYVLALTVENFLERRLQTIVFKAGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Cp4.1LG01g12570 vs. NCBI nr
Match: gi|720081906|ref|XP_010242426.1| (PREDICTED: 40S ribosomal protein S9-2 [Nelumbo nucifera])

HSP 1 Score: 379.4 bits (973), Expect = 3.8e-102
Identity = 194/197 (98.48%), Postives = 194/197 (98.48%), Query Frame = 1 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN ARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNAARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180
           AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSP GGGRPGRVKRKNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g12570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS92_ARATH2.5e-9890.8640S ribosomal protein S9-2 OS=Arabidopsis thaliana GN=RPS9C PE=1 SV=1[more]
RS91_ARATH9.4e-9386.8740S ribosomal protein S9-1 OS=Arabidopsis thaliana GN=RPS9B PE=1 SV=1[more]
RS9_PODAS7.7e-7173.3040S ribosomal protein S9 OS=Podospora anserina GN=RPS9 PE=3 SV=1[more]
RS9_BOVIN7.2e-6971.7440S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=2 SV=1[more]
RS9_HUMAN7.2e-6971.7440S ribosomal protein S9 OS=Homo sapiens GN=RPS9 PE=1 SV=3[more]
BLAST of Cp4.1LG01g12570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSN1_CUCSA2.2e-104100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604980 PE=3 SV=1[more]
W9QV98_9ROSA3.5e-10297.9740S ribosomal protein S9-2 OS=Morus notabilis GN=L484_006534 PE=3 SV=1[more]
D7FBA7_VITVI3.5e-10297.46Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g00460 PE=3 SV=... [more]
A0A059ARY5_EUCGR1.0e-10196.95Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01938 PE=3 SV=1[more]
A0A059CYL4_EUCGR1.3e-10197.46Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00467 PE=3 SV=1[more]
BLAST of Cp4.1LG01g12570 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G39850.11.4e-9990.86 Ribosomal protein S4[more]
AT5G15200.15.3e-9486.87 Ribosomal protein S4[more]
BLAST of Cp4.1LG01g12570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434792|ref|XP_004135180.1|3.1e-104100.00PREDICTED: 40S ribosomal protein S9-2 [Cucumis sativus][more]
gi|719965609|ref|XP_010256989.1|3.4e-10398.98PREDICTED: 40S ribosomal protein S9-2-like [Nelumbo nucifera][more]
gi|1009132749|ref|XP_015883538.1|3.4e-10398.48PREDICTED: 40S ribosomal protein S9-2 [Ziziphus jujuba][more]
gi|1009124995|ref|XP_015879372.1|1.7e-10297.46PREDICTED: 40S ribosomal protein S9-2 [Ziziphus jujuba][more]
gi|720081906|ref|XP_010242426.1|3.8e-10298.48PREDICTED: 40S ribosomal protein S9-2 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
GO:0019843rRNA binding
Vocabulary: INTERPRO
TermDefinition
IPR022801Ribosomal_S4/S9
IPR018079Ribosomal_S4_CS
IPR005710Ribosomal_S4/S9_euk/arc
IPR002942S4_RNA-bd
IPR001912Ribosomal_S4/S9_N
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005622 intracellular
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g12570.1Cp4.1LG01g12570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 8..64
score: 3.
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 8..108
score: 6.8
IPR002942RNA-binding S4 domainGENE3DG3DSA:3.10.290.10coord: 108..155
score: 1.6
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 109..152
score: 4.1
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 109..180
score: 2.
IPR002942RNA-binding S4 domainPROFILEPS50889S4coord: 109..180
score: 11
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMsTIGR01018TIGR01018coord: 11..166
score: 1.9
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 107..131
scor
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 1..197
score: 7.6E
NoneNo IPR availablePANTHERPTHR11831:SF13SUBFAMILY NOT NAMEDcoord: 1..197
score: 7.6E
NoneNo IPR availableunknownSSF55174Alpha-L RNA-binding motifcoord: 12..159
score: 3.83

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g12570Cucsa.285190Cucumber (Gy14) v1cgycpeB0754
Cp4.1LG01g12570CmaCh18G011610Cucurbita maxima (Rimu)cmacpeB432
Cp4.1LG01g12570CmaCh04G016490Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g12570CmoCh04G017280Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g12570CmoCh18G011840Cucurbita moschata (Rifu)cmocpeB395
Cp4.1LG01g12570Cla010174Watermelon (97103) v1cpewmB432
Cp4.1LG01g12570Csa5G604980Cucumber (Chinese Long) v2cpecuB416
Cp4.1LG01g12570MELO3C012084Melon (DHL92) v3.5.1cpemeB377
Cp4.1LG01g12570ClCG05G024390Watermelon (Charleston Gray)cpewcgB393
Cp4.1LG01g12570CSPI05G23610Wild cucumber (PI 183967)cpecpiB415
Cp4.1LG01g12570Lsi04G004360Bottle gourd (USVL1VR-Ls)cpelsiB360
Cp4.1LG01g12570MELO3C012084.2Melon (DHL92) v3.6.1cpemedB437
Cp4.1LG01g12570CsaV3_5G032570Cucumber (Chinese Long) v3cpecucB0518
Cp4.1LG01g12570Bhi07G001289Wax gourdcpewgoB0568
Cp4.1LG01g12570CsGy5G023170Cucumber (Gy14) v2cgybcpeB626
Cp4.1LG01g12570Carg01710Silver-seed gourdcarcpeB1177
Cp4.1LG01g12570Carg17260Silver-seed gourdcarcpeB0148
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g12570Cp4.1LG09g01780Cucurbita pepo (Zucchini)cpecpeB034
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g12570Melon (DHL92) v3.5.1cpemeB392
Cp4.1LG01g12570Cucumber (Gy14) v2cgybcpeB060
Cp4.1LG01g12570Cucumber (Gy14) v2cgybcpeB061
Cp4.1LG01g12570Cucumber (Gy14) v2cgybcpeB645
Cp4.1LG01g12570Melon (DHL92) v3.6.1cpemedB421
Cp4.1LG01g12570Melon (DHL92) v3.6.1cpemedB454
Cp4.1LG01g12570Melon (DHL92) v3.6.1cpemedB459
Cp4.1LG01g12570Silver-seed gourdcarcpeB0069
Cp4.1LG01g12570Silver-seed gourdcarcpeB0981
Cp4.1LG01g12570Cucumber (Chinese Long) v3cpecucB0470
Cp4.1LG01g12570Cucumber (Chinese Long) v3cpecucB0471
Cp4.1LG01g12570Cucumber (Chinese Long) v3cpecucB0537
Cp4.1LG01g12570Wax gourdcpewgoB0507
Cp4.1LG01g12570Wax gourdcpewgoB0581
Cp4.1LG01g12570Cucurbita pepo (Zucchini)cpecpeB203
Cp4.1LG01g12570Cucurbita pepo (Zucchini)cpecpeB346
Cp4.1LG01g12570Cucurbita pepo (Zucchini)cpecpeB390
Cp4.1LG01g12570Cucumber (Gy14) v1cgycpeB0256
Cp4.1LG01g12570Cucurbita maxima (Rimu)cmacpeB478
Cp4.1LG01g12570Cucurbita moschata (Rifu)cmocpeB436
Cp4.1LG01g12570Wild cucumber (PI 183967)cpecpiB379
Cp4.1LG01g12570Cucumber (Chinese Long) v2cpecuB379
Cp4.1LG01g12570Bottle gourd (USVL1VR-Ls)cpelsiB331
Cp4.1LG01g12570Watermelon (Charleston Gray)cpewcgB385
Cp4.1LG01g12570Watermelon (97103) v1cpewmB444
Cp4.1LG01g12570Watermelon (97103) v1cpewmB448