Cp4.1LG01g12330 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACTTCGGAATCGAAACTCCAAGACGCAGAATCGAACGCCGCCGCCGCCACTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTCTGAGGAAAAATCGCCCGAGGAATCAGGTCAATCAGGAAAGATTTCCGGAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGTTTTGAAGTCACTGGGGCTTTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGAATCAACTCCAAATGCTACCCAGCAACATACGGATTCCATAGACCTGGAGGTGATTGCAGGTACCGAGAATTTGGAAGAACAGAAGGCCTCTGCTGCTGGTAAGTGA ATGTCAACTTCGGAATCGAAACTCCAAGACGCAGAATCGAACGCCGCCGCCGCCACTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTCTGAGGAAAAATCGCCCGAGGAATCAGGTCAATCAGGAAAGATTTCCGGAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGTTTTGAAGTCACTGGGGCTTTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGAATCAACTCCAAATGCTACCCAGCAACATACGGATTCCATAGACCTGGAGGTGATTGCAGGTACCGAGAATTTGGAAGAACAGAAGGCCTCTGCTGCTGGTAAGTGA ATGTCAACTTCGGAATCGAAACTCCAAGACGCAGAATCGAACGCCGCCGCCGCCACTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTCTGAGGAAAAATCGCCCGAGGAATCAGGTCAATCAGGAAAGATTTCCGGAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGTTTTGAAGTCACTGGGGCTTTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGAATCAACTCCAAATGCTACCCAGCAACATACGGATTCCATAGACCTGGAGGTGATTGCAGGTACCGAGAATTTGGAAGAACAGAAGGCCTCTGCTGCTGGTAAGTGA MSTSESKLQDAESNAAAATKTPEDQQQLGAPNHSEEKSPEESGQSGKISGSGGEDEGGEDLDEEEEGECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNATQQHTDSIDLEVIAGTENLEEQKASAAGK
BLAST of Cp4.1LG01g12330 vs. TrEMBL
Match: A0A0A0KU46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606380 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 3.7e-63 Identity = 139/178 (78.09%), Postives = 149/178 (83.71%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TrEMBL
Match: W9S8D6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015692 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-36 Identity = 96/166 (57.83%), Postives = 113/166 (68.07%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TrEMBL
Match: A0A067GTN9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028835mg PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 3.1e-33 Identity = 91/161 (56.52%), Postives = 111/161 (68.94%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TrEMBL
Match: V4TF84_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033434mg PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 9.0e-33 Identity = 90/161 (55.90%), Postives = 111/161 (68.94%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TrEMBL
Match: A0A0D2SNK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G326500 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.4e-32 Identity = 79/127 (62.20%), Postives = 94/127 (74.02%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TAIR10
Match: AT1G14060.1 (AT1G14060.1 GCK domain-containing protein) HSP 1 Score: 129.8 bits (325), Expect = 1.7e-30 Identity = 76/143 (53.15%), Postives = 93/143 (65.03%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TAIR10
Match: AT5G57640.1 (AT5G57640.1 GCK domain-containing protein) HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13 Identity = 53/131 (40.46%), Postives = 68/131 (51.91%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TAIR10
Match: AT5G02210.1 (AT5G02210.1 GCK domain-containing protein) HSP 1 Score: 73.2 bits (178), Expect = 1.9e-13 Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TAIR10
Match: AT5G57570.1 (AT5G57570.1 GCK domain-containing protein) HSP 1 Score: 70.9 bits (172), Expect = 9.2e-13 Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. TAIR10
Match: AT1G14048.1 (AT1G14048.1 GCK domain-containing protein) HSP 1 Score: 48.5 bits (114), Expect = 4.9e-06 Identity = 32/91 (35.16%), Postives = 44/91 (48.35%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. NCBI nr
Match: gi|778705481|ref|XP_011655692.1| (PREDICTED: uncharacterized protein LOC105435574 [Cucumis sativus]) HSP 1 Score: 249.2 bits (635), Expect = 5.4e-63 Identity = 139/178 (78.09%), Postives = 149/178 (83.71%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. NCBI nr
Match: gi|659091145|ref|XP_008446394.1| (PREDICTED: serrate RNA effector molecule homolog [Cucumis melo]) HSP 1 Score: 235.7 bits (600), Expect = 6.1e-59 Identity = 135/182 (74.18%), Postives = 148/182 (81.32%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. NCBI nr
Match: gi|703146100|ref|XP_010108704.1| (hypothetical protein L484_015692 [Morus notabilis]) HSP 1 Score: 161.4 bits (407), Expect = 1.5e-36 Identity = 96/166 (57.83%), Postives = 113/166 (68.07%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. NCBI nr
Match: gi|1009154180|ref|XP_015895028.1| (PREDICTED: uncharacterized protein LOC107428938 [Ziziphus jujuba]) HSP 1 Score: 157.1 bits (396), Expect = 2.8e-35 Identity = 92/171 (53.80%), Postives = 119/171 (69.59%), Query Frame = 1
BLAST of Cp4.1LG01g12330 vs. NCBI nr
Match: gi|720082753|ref|XP_010242687.1| (PREDICTED: uncharacterized protein LOC104586972 [Nelumbo nucifera]) HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33 Identity = 87/145 (60.00%), Postives = 105/145 (72.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |