CmaCh04G016750 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACTTCGGAGTCGAAACTCCAAGACGCAGAATCAAACGCCGCCGCCGCCGCCGCTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTCTGAGGAAAAATCGCCCCAGGAATCAGTTCAATCAGGAAAGATTTCTGAAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGCTTTGAAGTCACTGGGGCTCTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGAATCAACTCCAAATGCTACCCAGCAACATACAGATTCCAAAGACCTGGAGGTGATTTCAGGTACCGAGAATTTGGAAGAACAGAAGGCCTCTGCTGCTGGTAAGTGA ATGTCAACTTCGGAGTCGAAACTCCAAGACGCAGAATCAAACGCCGCCGCCGCCGCCGCTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTCTGAGGAAAAATCGCCCCAGGAATCAGTTCAATCAGGAAAGATTTCTGAAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGCTTTGAAGTCACTGGGGCTCTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGAATCAACTCCAAATGCTACCCAGCAACATACAGATTCCAAAGACCTGGAGGTGATTTCAGGTACCGAGAATTTGGAAGAACAGAAGGCCTCTGCTGCTGGTAAGTGA ATGTCAACTTCGGAGTCGAAACTCCAAGACGCAGAATCAAACGCCGCCGCCGCCGCCGCTAAAACACCGGAAGATCAACAACAATTGGGCGCCCCAAATCACTCTGAGGAAAAATCGCCCCAGGAATCAGTTCAATCAGGAAAGATTTCTGAAAGTGGAGGTGAAGATGAAGGAGGAGAGGATCTAGACGAGGAAGAGGAGGGGGAGTGTGGGTTTTGCTTGTTTATGAAAGGGGGTGGTTGCAGAGATAGCTTCGTAGAATGGGAGAAATGCATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAGTGCTTTGAAGTCACTGGGGCTCTGAAGAAATGTATGGAGGCTCATGCGGATTATTACGAGCCGATTCTGAAGGCGGAGAAAATGGCAGAAAACGAGGCGATTATCGAATTGGAGAAGGAATCAACTCCAAATGCTACCCAGCAACATACAGATTCCAAAGACCTGGAGGTGATTTCAGGTACCGAGAATTTGGAAGAACAGAAGGCCTCTGCTGCTGGTAAGTGA MSTSESKLQDAESNAAAAAAKTPEDQQQLGAPNHSEEKSPQESVQSGKISESGGEDEGGEDLDEEEEGECGFCLFMKGGGCRDSFVEWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHADYYEPILKAEKMAENEAIIELEKESTPNATQQHTDSKDLEVISGTENLEEQKASAAGK
BLAST of CmaCh04G016750 vs. TrEMBL
Match: A0A0A0KU46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606380 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 8.4e-63 Identity = 138/179 (77.09%), Postives = 149/179 (83.24%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TrEMBL
Match: W9S8D6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015692 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.9e-36 Identity = 94/166 (56.63%), Postives = 114/166 (68.67%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TrEMBL
Match: A0A067GTN9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028835mg PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.4e-33 Identity = 91/160 (56.88%), Postives = 111/160 (69.38%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TrEMBL
Match: V4TF84_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033434mg PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 6.9e-33 Identity = 90/160 (56.25%), Postives = 111/160 (69.38%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TrEMBL
Match: A0A0D2SNK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G326500 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.6e-32 Identity = 80/127 (62.99%), Postives = 95/127 (74.80%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TAIR10
Match: AT1G14060.1 (AT1G14060.1 GCK domain-containing protein) HSP 1 Score: 132.9 bits (333), Expect = 2.0e-31 Identity = 73/128 (57.03%), Postives = 89/128 (69.53%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TAIR10
Match: AT5G02210.1 (AT5G02210.1 GCK domain-containing protein) HSP 1 Score: 72.8 bits (177), Expect = 2.4e-13 Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TAIR10
Match: AT5G57640.1 (AT5G57640.1 GCK domain-containing protein) HSP 1 Score: 71.6 bits (174), Expect = 5.4e-13 Identity = 59/158 (37.34%), Postives = 80/158 (50.63%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TAIR10
Match: AT5G57570.1 (AT5G57570.1 GCK domain-containing protein) HSP 1 Score: 65.5 bits (158), Expect = 3.9e-11 Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 1
BLAST of CmaCh04G016750 vs. TAIR10
Match: AT1G14048.1 (AT1G14048.1 GCK domain-containing protein) HSP 1 Score: 49.7 bits (117), Expect = 2.2e-06 Identity = 36/107 (33.64%), Postives = 50/107 (46.73%), Query Frame = 1
BLAST of CmaCh04G016750 vs. NCBI nr
Match: gi|778705481|ref|XP_011655692.1| (PREDICTED: uncharacterized protein LOC105435574 [Cucumis sativus]) HSP 1 Score: 248.1 bits (632), Expect = 1.2e-62 Identity = 138/179 (77.09%), Postives = 149/179 (83.24%), Query Frame = 1
BLAST of CmaCh04G016750 vs. NCBI nr
Match: gi|659091145|ref|XP_008446394.1| (PREDICTED: serrate RNA effector molecule homolog [Cucumis melo]) HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59 Identity = 135/183 (73.77%), Postives = 149/183 (81.42%), Query Frame = 1
BLAST of CmaCh04G016750 vs. NCBI nr
Match: gi|703146100|ref|XP_010108704.1| (hypothetical protein L484_015692 [Morus notabilis]) HSP 1 Score: 159.5 bits (402), Expect = 5.6e-36 Identity = 94/166 (56.63%), Postives = 114/166 (68.67%), Query Frame = 1
BLAST of CmaCh04G016750 vs. NCBI nr
Match: gi|658059673|ref|XP_008365666.1| (PREDICTED: mitochondrial intermembrane space import and assembly protein 40-like [Malus domestica]) HSP 1 Score: 156.0 bits (393), Expect = 6.2e-35 Identity = 86/147 (58.50%), Postives = 105/147 (71.43%), Query Frame = 1
BLAST of CmaCh04G016750 vs. NCBI nr
Match: gi|823198266|ref|XP_012434544.1| (PREDICTED: neurofilament medium polypeptide-like [Gossypium raimondii]) HSP 1 Score: 152.9 bits (385), Expect = 5.3e-34 Identity = 85/143 (59.44%), Postives = 101/143 (70.63%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |